mRNA_H-paniculata_contig9321.17104.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Match: A0A6H5JVI2_9PHAE (Amino_oxidase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVI2_9PHAE) HSP 1 Score: 245 bits (626), Expect = 4.320e-75 Identity = 122/170 (71.76%), Postives = 140/170 (82.35%), Query Frame = 1 Query: 1 FNFYAAAPARTDPSVCPEGSDAIMVLVPCPTLSDADNGQ-DGDAGGXXXXXKSGGG--RDTWVNRAREGVIREMEASAGMTGFGESLIGEEVYAPEDWRNSRYNLRRGAVFGLSHGLNQLSLLRPSPQHPTVRGLWFCGASTRPGNGVPLVLIGARQAAESLVATVRRGD 501 FNFYAAAPARTDPSVCPE SDAIM+LVPCP++ D G+ D A ++GGG R+ WV RAREGVIREMEASAGM GFG+S++GEEVYAP +WR+ RYNLRRGAVFGLSHGLNQLSLLRP PQHPTV GLWFCGAS+RPGNGVPLVLIGA+Q A +++ V G+ Sbjct: 472 FNFYAAAPARTDPSVCPEESDAIMILVPCPSIPDDYTGEIDDGASASARATRNGGGPDREDWVRRAREGVIREMEASAGMEGFGDSIVGEEVYAPWNWRD-RYNLRRGAVFGLSHGLNQLSLLRPGPQHPTVNGLWFCGASSRPGNGVPLVLIGAKQVAANVLKVVEGGN 640
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Match: A0A835Z7G4_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G4_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.800e-53 Identity = 96/173 (55.49%), Postives = 115/173 (66.47%), Query Frame = 1 Query: 1 FNFYAAAPARTDPSVCPEGSDAIMVLVPCPTLSDADNGQDGDAGGXXXXXKSGGGRD------TWVNRAREGVIREMEASAGMTGFGESLIGEEVYAPEDWRNSRYNLRRGAVFGLSHGLNQLSLLRPSPQHPTVRGLWFCGASTRPGNGVPLVLIGARQAAESLVATVRRGD 501 FNFY AA +RTDPSVCPEG DAIMVLVPCP L G D GGRD W+ AR+GV+++ E +AGM GF +S+ E VY P DW+ RY+L RGA FGL+H LNQL++ RPSP+HP V L+F GASTRPGNG+PLVL GAR A+ +VA RR D Sbjct: 219 FNFYCAAASRTDPSVCPEGHDAIMVLVPCPLLPPTPEGGDS--------RTQAGGRDWDAEVAQWMETARKGVLQQFEEAAGMAGFADSIRAELVYTPRDWQQ-RYSLERGAAFGLAHSLNQLAIFRPSPRHPNVDDLYFVGASTRPGNGLPLVLTGARLVADDVVA--RRPD 380
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Match: A0A7S4D4C4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4C4_HETAK) HSP 1 Score: 160 bits (406), Expect = 2.270e-46 Identity = 86/159 (54.09%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 4 NFYAAAPARTDPSVCPEGSDAIMVLVPCPTLSDADNGQDGDAGGXXXXXKSGGGRDTWVNRAREGVIREMEASAGMTGFGESLIGEEVYAPEDWRNSRYNLRRGAVFGLSHGLNQLSLLRPSPQHPTVRGLWFCGASTRPGNGVPLVLIGARQAAESLV 480 NFY APARTDPSVCPEG DAIMVLVPCP LS A N DGD G +AR+ V+R AGMT F ++ E +Y+P +W+ +RYNL RGAVFGL+HGL+QL++ RP HP V GL+ GAS RPGNGVPLV+IGA + A+ ++ Sbjct: 93 NFYVHAPARTDPSVCPEGHDAIMVLVPCPVLSSASN--DGDQGPSFQQQIK-----NLKQQARDLVLRRF-TEAGMTDFESHIVDEFIYSPVEWK-ARYNLGRGAVFGLAHGLDQLAVFRPGAAHPRVAGLYRVGASARPGNGVPLVMIGAEKTADLII 242
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Match: A0A0G4G440_VITBC (Amino_oxidase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G440_VITBC) HSP 1 Score: 158 bits (400), Expect = 3.220e-42 Identity = 90/170 (52.94%), Postives = 105/170 (61.76%), Query Frame = 1 Query: 1 FNFYAAAPARTDPSVCPEGSDAIMVLVPCPTLSD---ADNGQDGDAGGXXXXXKSGGGR--DTWVNRAREGVIREMEASAGMTGFGESLIGEEVYAPEDWRNSRYNLRRGAVFGLSHGLNQLSLLRPSPQHPTVRGLWFCGASTRPGNGVPLVLIGARQAAESLVATVRR 495 FNFY A +RTDPS CPEG D IMVLVP P L + AD Q R D V+ AREGV+R MEA GM SL+ E V +P DW+ YNLRRGAVFGL+H L QL + RP P+HPT+ L+ GAS RPGNGVPLVL+GA+Q AE +V RR Sbjct: 462 FNFYVHASSRTDPSACPEGCDNIMVLVPVPALDERMSADEQQ----------------RLVDRTVSDAREGVLRRMEAVPGMENIRSSLLHEFVRSPMDWKRL-YNLRRGAVFGLAHPLRQLVIFRPGPKHPTIGNLYAVGASARPGNGVPLVLVGAKQTAERIVKDFRR 614
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Match: A0A7S0CRG6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CRG6_9EUKA) HSP 1 Score: 155 bits (391), Expect = 1.760e-41 Identity = 81/160 (50.62%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 1 FNFYAAAPARTDPSVCPEGSDAIMVLVPCPTLSDADNGQDGDAGGXXXXXKSGGGRDTWVN-RAREGVIREMEASAGMTGFGESLIGEEVYAPEDWRNSRYNLRRGAVFGLSHGLNQLSLLRPSPQHPTVRGLWFCGASTRPGNGVPLVLIGARQAAESL 477 FNFY AP+RTDPS CPEG D+IMVLVP P + ++ + R+ V RE VI+ E AGM F ++GE + P WR +YNLRRG+VFGL+H + QLSL RP P+HPT+R L+F GAST PGNGVPLVL+GA Q AE + Sbjct: 377 FNFYVHAPSRTDPSACPEGHDSIMVLVPSPPVDES------------LSLEEARERERRVKFEVREAVIQRFE-DAGMKDFRSHIVGESIRTPTQWRE-KYNLRRGSVFGLAHPMQQLSLFRPQPKHPTIRDLYFVGASTTPGNGVPLVLVGAEQVAEQI 522
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Match: A0A7S2DN55_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DN55_9STRA) HSP 1 Score: 145 bits (365), Expect = 6.610e-41 Identity = 79/161 (49.07%), Postives = 99/161 (61.49%), Query Frame = 1 Query: 4 NFYAAAPARTDP-SVCPEGSDAIMVLVPCPTLSDADNGQDGDAGGXXXXXKSGGGRDTWVNRAREGVIREMEASAGMTGFGESLIGEEVYAPEDWRNSRYNLRRGAVFGLSHGLNQLSLLRPSPQHPTVRGLWFCGASTRPGNGVPLVLIGARQAAESLVA 483 NFY AP+RTDP SVCP G DAI +LVPCPTL D GG + D + RARE V+ AG+ + ++ EE+ P WR +RY L RGAVFGL+H L QL++ RP P+HP + GL+F GAS RPGNGVPLV IGA Q + ++ A Sbjct: 40 NFYVHAPSRTDPVSVCPPGHDAITILVPCPTL---------DEGGDDCPDDND---DALIGRARELVVSRFHR-AGVEDVEKHIVAEEIVGPSTWR-ARYGLHRGAVFGLAHPLTQLAIFRPGPRHPYIDGLYFVGASARPGNGVPLVFIGATQTSNAVAA 186
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Match: A0A7S4DMK3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DMK3_9EUKA) HSP 1 Score: 152 bits (384), Expect = 8.770e-41 Identity = 82/169 (48.52%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 1 FNFYAAAPARTDPSVCPEGSDAIMVLVPCPTLSDADNGQDGDAGGXXXXXKSGGGRDTWVNRAREGVIREMEASAGMTGFGESLIGEEVYAPEDWRNSRYNLRRGAVFGLSHGLNQLSLLRPSPQHPTVRGLWFCGASTRPGNGVPLVLIGARQAAESLVATVRRGDHL 507 FNFY AP+RTDPS CP D+IMVLVP P L++ GG + + +ARE VI+ E AGMT F S++ E + P +W+ +NLRRG+VFG++H ++QLSL RPSP+HP ++ L+ GASTRPGNGVPLVL+GA Q A S++A R D L Sbjct: 330 FNFYVHAPSRTDPSCCPSNHDSIMVLVPAPPLAEE--------GGSLEDIRDA--EERLKAKAREAVIKRFE-DAGMTDFRSSIVDESIRGPLEWKQL-FNLRRGSVFGIAHPMDQLSLFRPSPEHPKLKNLFSVGASTRPGNGVPLVLVGAEQVARSILA---REDEL 483
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Match: A0A0M0JFW9_9EUKA (Phytoene dehydrogenase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JFW9_9EUKA) HSP 1 Score: 141 bits (355), Expect = 6.330e-38 Identity = 82/169 (48.52%), Postives = 103/169 (60.95%), Query Frame = 1 Query: 1 FNFYAAAPARTDPSVCP-EGSDAIMVLVPCPTLSDADNGQDGDAGGXXXXXKSGGGRDTWVNRAREGVIREMEASAGMTGFGESLIGEEVYAPEDWRNSRYNLRRGAVFGLSHGLNQLSLLRPSPQHPTVRGLWFCGASTRPGNGVPLVLIGARQAAESLVATVRRGDH 504 +FY APARTDPS C DA+MVLVP P L + + D A + V RAR+ VI+ E SAGM GFG +++ E V P WR++ Y LRRG+VFGLSH L QL+L RP+ +H VRGL + GA+TRPGNGVPLVLIGA + AE + + G Sbjct: 163 LHFYVHAPARTDPSCCELPTDDAVMVLVPVPPLDERMSAADVSAA-----------TERMVARARDAVIQTFE-SAGMEGFGATIVDERVRTPPGWRDA-YGLRRGSVFGLSHNLEQLALARPARRHKGVRGLHWVGANTRPGNGVPLVLIGAMKTAEEALLDLGIGHR 318
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Match: R1F803_EMIHU (Amino_oxidase domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F803_EMIHU) HSP 1 Score: 135 bits (340), Expect = 2.660e-35 Identity = 72/158 (45.57%), Postives = 90/158 (56.96%), Query Frame = 1 Query: 4 NFYAAAPARTDPSVCPEGSDAIMVLVPCPTLSDADNGQDGDAGGXXXXXKSGGGRDTWVNRAREGVIREMEASAGMTGFGESLIGEEVYAPEDWRNSRYNLRRGAVFGLSHGLNQLSLLRPSPQHPTVRGLWFCGASTRPGNGVPLVLIGARQAAESL 477 +FY P RTDP+ P G DAI VL+P P L + + +A D W R V+ + GM G+ +S+ E V P WR Y L RGAVFGL+ LNQLS LRP P+HP VR L+F GAS RPGNGVPLV+ GARQ +E++ Sbjct: 210 HFYVHCPTRTDPTAAPAGCDAITVLLPTPPLPVGASEAEAEALS-----------DVWAAAGRASVVERLARLPGMAGWQQSIRHESVIPPARWRRE-YGLARGAVFGLASSLNQLSFLRPGPRHPRVRNLYFAGASARPGNGVPLVMCGARQVSEAI 355
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Match: A0A7S3XP59_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP59_HETAK) HSP 1 Score: 129 bits (324), Expect = 6.100e-35 Identity = 71/143 (49.65%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 52 EGSDAIMVLVPCPTLSDADNGQDGDAGGXXXXXKSGGGRDTWVNRAREGVIREMEASAGMTGFGESLIGEEVYAPEDWRNSRYNLRRGAVFGLSHGLNQLSLLRPSPQHPTVRGLWFCGASTRPGNGVPLVLIGARQAAESLV 480 +G DAIMVLVPCP LS A N DGD G +AR+ V+R AGMT F ++ E +Y+P +W+ +RYNL RGAVFGL+HGL+QL++ RP HP V GL+ GAS RPGNGVPLV+IGA + A+ ++ Sbjct: 33 KGHDAIMVLVPCPVLSSASN--DGDQGPSFQQQIK-----NLKQQARDLVLRRF-TEAGMTDFESHIVDEFIYSPVEWK-ARYNLGRGAVFGLAHGLDQLAVFRPGAAHPRVAGLYRVGASARPGNGVPLVMIGAEKTADLII 166 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9321.17104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9321.17104.1 >prot_H-paniculata_contig9321.17104.1 ID=prot_H-paniculata_contig9321.17104.1|Name=mRNA_H-paniculata_contig9321.17104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp FNFYAAAPARTDPSVCPEGSDAIMVLVPCPTLSDADNGQDGDAGGGGGDGback to top mRNA from alignment at H-paniculata_contig9321:566..4300+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9321.17104.1 ID=mRNA_H-paniculata_contig9321.17104.1|Name=mRNA_H-paniculata_contig9321.17104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3735bp|location=Sequence derived from alignment at H-paniculata_contig9321:566..4300+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9321:566..4300+ >mRNA_H-paniculata_contig9321.17104.1 ID=mRNA_H-paniculata_contig9321.17104.1|Name=mRNA_H-paniculata_contig9321.17104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at H-paniculata_contig9321:566..4300+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |