mRNA_H-paniculata_contig9301.17084.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI) HSP 1 Score: 165 bits (417), Expect = 1.750e-42 Identity = 110/289 (38.06%), Postives = 142/289 (49.13%), Query Frame = 1 Query: 1 QSLGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPDETCGGKEAMEVYSMGDPAPTPAPAMIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCGSPGDDPTDASLGSCTMACAGDSSETCGGSNAISVY 867 +SLGCYAD +N R L +CG+GE AMSPAICA+YC T+ G T F V++S+QC CG S DYD+ GSLS D C++LC A PD CGG +EV+++GDP PT APA + PST+ AP S+ P P P +G Y GCF DS +DR+ S V MTTA+CA C ++GT++ EC+CG+ D +C M C GDSS+ CGG NA+S Y Sbjct: 432 ESLGCYADDVND-RALPIQGPNCGEGETAMSPAICASYCETL-GSTFFGVQFSFQCFCGPSTADYDKHGSLSSDNCEYLCDANPDFFCGGFSTIEVFTIGDPTPTEAPAPTPLVN-------------------------------------PSTQ--APXXXXXXXX------XXXXXXXXSTAPTTPAPVN-----AGAAGYLGCFGDSQTDRVFS--VVVFSGSMTTAICASTCADYAYYGTQFGGECWCGNNADYDVYGEA-TCDMGCTGDSSDICGGFNAMSFY 665
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 160 bits (404), Expect = 1.320e-40 Identity = 100/208 (48.08%), Postives = 117/208 (56.25%), Query Frame = 1 Query: 250 PDETCGGKEAMEVYSMGDPAPTPAPAMIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSG-SAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCGSPGDDPTDASLGS-CTMACAGDSSETCGGSNAISVY 867 PD G M V S+ M+TA CA+FC G YFG Q+ ECFC ++ D E G S C CSGD +E CGGS A+ VYE+S XXX YE GCFVD +SDR+LSG S + +S MT A CA CEGST+FGTEY+ ECFC S GD P + S C M C+GDSSETCGG NAI VY Sbjct: 187 PDRVLSGDSMMSVNSV----------------MTTAYCADFCEGSDYFGVQFGYECFCSSSGDTPDELGESEDCEMACSGDSSEICGGSYAIQVYEYS--DXXXXXXXXXXXXXXXXXYESVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFCEGSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVY 376
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: A0A1Y2LJZ5_EPING (Uncharacterized protein n=1 Tax=Epicoccum nigrum TaxID=105696 RepID=A0A1Y2LJZ5_EPING) HSP 1 Score: 154 bits (390), Expect = 1.130e-38 Identity = 113/326 (34.66%), Postives = 159/326 (48.77%), Query Frame = 1 Query: 4 SLGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSL--SQDKCKHLCTAFPD--ETCGGKEAMEVYSMGDPAPTPAPAMIGQA---------------------DMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPV----------PTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICE--GSTFFGTEYSEECFCGSPGDDPTDASL-GSCTMACAGDSSETCGGSNAISVY 867 +LGCY D N KR L T + MS CA +CS S LF +EY +C+CG S ++ GS+ S++ C C P+ E CG + + YS + + AM G DM+ A CA+ C+GY YFGTQY EC+CG + S +++C C+G+ E CGG ++VY+ S PTP + +G Y Y GC+ D+ R+LSG AD+ MT CA C G ++FG EYS EC+CG+ D + S G+C C+GD+S+ CGG+N +SVY Sbjct: 102 ALGCYTDNANGKRAL----TGKSMAADDMSVQKCATFCSQFS---LFGLEYGRECYCGNSRDE----GSVKASENDCSFSCAGNPNGAEKCGAGDRLNFYSNQNVITVKSAAMPGVTSLGCFVDNGNRVLPMGFANAQDMTAAKCAQNCAGYSYFGTQYSSECYCGHTAPKTSAL--ASECNMACAGNGDELCGGGMRLNVYQVDPPSAATAVSXXXXXXXXPTPTTPSIVVAG-YRYQGCYTDNVPQRVLSGKNT-ADAAMTLEKCAAFCSKSGYSWFGVEYSSECYCGTSLDPLSVPSREGACNAQCSGDASQKCGGANLLSVY 412
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: UPI001874BD84 (uncharacterized protein n=1 Tax=Colletotrichum truncatum TaxID=5467 RepID=UPI001874BD84) HSP 1 Score: 153 bits (386), Expect = 3.560e-38 Identity = 104/315 (33.02%), Postives = 163/315 (51.75%), Query Frame = 1 Query: 4 SLGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPDET--CGGKEAMEVY-SMGDPAPTPAPA--------------------MIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSS-TPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGS--TFFGTEYSEECFCGSPGDDP-TDASLGSCTMACAGDSSETCGGSNAISVY 867 +LGC+ D +N +RVL T+ N ++ CAA CS F VE+ +C+CG S + + + + C C P CG + + +Y + AP PA + +DM+ A CA C+GYKYFGTQ+ EC+CG + + P+++C C+G+ +E CGGS ++VYE SS P+ P + + ++Y GC+ D+ R+LSG +K D MT +CA C+ S ++FG E+S EC+CG D T + C+MAC+G+SS++CGG+N +S++ Sbjct: 37 ALGCFTDNVNGRRVLGDKNTAA----NDITLEKCAASCSQYK---YFGVEFGRECYCGNSRDSGSTEANAAD--CWFPCAGDPTGVAKCGAADRINIYVNTNSNAPAPASLDGITSLGCFAEGTQRVLPEKTVAASDMTAAKCATNCAGYKYFGTQWSSECYCGNTAPAITV--PTSECNMVCAGNSSELCGGSLRLNVYELPQSSQASPLSVPVIPSVS---GFDYKGCYTDNVPYRVLSGKVIK-DPAMTLEMCAAACKNSGYSWFGVEFSTECYCGMALDKASTSTAAAECSMACSGNSSQSCGGANRLSLF 336
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: UPI001873F7A4 (uncharacterized protein n=1 Tax=Colletotrichum truncatum TaxID=5467 RepID=UPI001873F7A4) HSP 1 Score: 150 bits (379), Expect = 2.620e-37 Identity = 107/316 (33.86%), Postives = 159/316 (50.32%), Query Frame = 1 Query: 7 LGCYADFINKKRVLS--HAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPD--ETCGGKEAMEVYSMGD-----PAPTPAPA----------------MIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEF-SGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICE--GSTFFGTEYSEECFCGSPGDDPTDASLGS-CTMACAGDSSETCGGSNAISVY 867 LGC+ D N +R ++ +AAT N M+ CAA+CS + F +EY +C+CG S + + + C C P + CG + +YS + PA P A +IG DM+ A CA C GY YFGTQ+ EC+CG + + S P+++C CSG E CGGS ++VY+ S ++ P + P +EY GC+ D R+L+G V D MT +CA C+ G T+FG EY+ EC+CG+ D + G+ C+M+C G++S+ CG +N ISV+ Sbjct: 37 LGCFTDLANGQRAINDKNAAT------NDMTVESCAAFCSNYA---FFGLEYGRECYCGNSRDSGSTEADAND--CSFSCAGDPSGVQRCGAGNRLNLYSNSNYAAAAPASLPDIASLGCFVDSAQRVLPDKIIGANDMTAAKCAANCVGYSYFGTQWSSECYCG--NTVPSVSAPASECNMLCSGKGDEVCGGSLRLNVYKLPSTANNQPSTSATEPAIPPVSGFEYKGCYSDGIPQRVLAGKVVN-DPSMTIEMCAEACKNWGYTWFGVEYTTECYCGTALDGASTKVAGTECSMSCGGNNSQKCGAANRISVF 338
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: A0A1Y2FN79_PROLT (WSC domain-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FN79_PROLT) HSP 1 Score: 144 bits (362), Expect = 2.550e-36 Identity = 113/309 (36.57%), Postives = 144/309 (46.60%), Query Frame = 1 Query: 4 SLGCYADFINKKRVLSHAATSCGKGENAMSPAI-----CAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPDETCGGKEAMEVYSMGDPAPTPA-----------PAMIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPST--KCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDS-TSDRILSGSAVKADSGMTTAVCAGIC--EGSTFFGTEYSEECFCGSPGDDPTDASLGSCTMACAGDSSETCGGSNAISVY 867 ++GCY+D K RVLS G++ P CA +C+ G + EY +C+CG S L C C+A PDE CGG A+ + S+ A DMS CA C G+ +G +Y +EC+CG L GP+ C CSG E CGGSNA+SVY P V + + GCF D R+L G+ +D MT AVC+ C T FGTE+ ECFCG+ PT +S G CT +CAGDSSE CGGSNAISVY Sbjct: 51 NVGCYSDDYPKSRVLS--------GKSYSEPTYNTLYRCAEFCAD-HGFAVSGAEYGQECYCGNSLPPTQ----LDSSACDFPCSAKPDEICGGNNALSIQSITFVQSLGCYEDQINYRSLNGASFSAPDMSIEKCAGLCQGFTNYGVEYSNECYCGNGLRL----GPTAAANCNMACSGSPNEICGGSNALSVY-----GAPVVASDV-------NNVTSIGCFTDFYPQSRVLDGANTASDE-MTEAVCSAFCAQRAFTLFGTEFGRECFCGNTL--PTVSSSG-CTQSCAGDSSEICGGSNAISVY 326
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: A0A084FVF2_PSEDA (Beta-1, 3 exoglucanase n=1 Tax=Pseudallescheria apiosperma TaxID=563466 RepID=A0A084FVF2_PSEDA) HSP 1 Score: 144 bits (364), Expect = 3.200e-35 Identity = 103/320 (32.19%), Postives = 144/320 (45.00%), Query Frame = 1 Query: 7 LGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPDETCGGKEAMEVYSM---GDPAPTPAP-------------------------AMIGQA----DMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCGSPGDDPTD-ASLGSCTMACAGDSSETCGGSNAISVY 867 L C+ + N R L A+ + +AM+ C A+C+ G + EY +C CG S + + LS+ C +C+ + CG +E+YS G P TP P A+ +A DM+ CAEFC G FCG S P + C PC G+ T+ CG +N +++Y+ P P+P G Y + GC + SA AD GMT +CAG+CEG FFGTEY+ ECFCG+ + ++ A +G C M CAGD E CGG N +SVY Sbjct: 749 LSCWTEGANNIRALKEASFA----SDAMTLESCMAFCA---GYVYWGTEYGRECFCGDSLDATSSEAPLSE--CDMVCSGDDSQYCGAGNRLELYSTTATGVPTATPTPDDHFPSPIGPYNLVGCWKEGANGVRALDAKATASPDMTLDKCAEFCDG------------FCGNTLHQTSSPAPISNCNTPCPGNATQHCGAANRLTLYQLPDYQEPHHPSPI-------GPYTFAGCRTELGPGARALSSAAFADDGMTNGMCAGLCEGYAFFGTEYARECFCGNELAEGSEVADVGDCAMVCAGDGGELCGGPNRLSVY 1040
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: UPI00144A7B17 (heme peroxidase n=1 Tax=Lindgomyces ingoldianus TaxID=673940 RepID=UPI00144A7B17) HSP 1 Score: 143 bits (361), Expect = 7.790e-35 Identity = 103/319 (32.29%), Postives = 152/319 (47.65%), Query Frame = 1 Query: 7 LGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDK--CKHLCTAFPDETCGGKEAMEVY------SMGDPAPTPAPAMIGQ----------------------ADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSG-DVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCGSPGDDPTDASLGS-CTMACAGDSSETCGGSNAISVY 867 +GCY++ + R LS + T+ NAM+ CA +C+ G T F VEY +C+CG GS++Q C C E CG + +Y S P P+ P + G ++ + ATCA+FCSGY YFG +Y EC+C P + C CSG + T CG +N ++V++ + +TPP P Y YTGC DS ++R+L+G D+ MT +C C+G+ +FGTEY EC+CG +PT S C+ C G+ E CGG+N +S++ Sbjct: 647 IGCYSEG-STGRALSDSQTA----NNAMTVEACANFCN---GATYFGVEYGQECYCG----GVLNAGSVNQSATDCSMTCAGNSTEYCGAGNRLNIYKKIPVTSSLTPMPSTTPHLSGYTYLGCLSDSVTSRTLSIKSYSTSNNTYATCADFCSGYVYFGVEYSTECYCSDTLSNTPSTVPESDCNMACSGSEGTGNCGAANRLNVFKSTTITTPPA-NPVV------AGYNYTGCHTDSVNNRVLNG-VFLFDASMTVEMCVEFCKGTKYFGTEYGGECYCGEKFVNPTSVVQESNCSFVCGGNKKEYCGGANRLSLW 945
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: S3D7Y3_GLAL2 (Uncharacterized protein n=1 Tax=Glarea lozoyensis (strain ATCC 20868 / MF5171) TaxID=1116229 RepID=S3D7Y3_GLAL2) HSP 1 Score: 143 bits (360), Expect = 8.160e-35 Identity = 107/325 (32.92%), Postives = 154/325 (47.38%), Query Frame = 1 Query: 10 GCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLS--QDKCKHLCTAFPDETCGGKEAMEVY--------SMGDPAPTPAP--------------AMIGQA---------DMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEY-----TGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCG-SPGDDPTDASLGSCTMACAGDSSETCGGSNAISVY 867 GCY + + R LS A+ + + ++ CA +CS+ +F VEY +C+CG + GS+ C C+ +TCG + VY + P T +P A G+A M+T CA C+G+KYFG +YY EC+CG + S ST C PC+GD T+TCG +N +++Y F SS+ P P XXX Y TGC+ ++T+ R LSG A ++GMT +CA C G FG EY EC+CG S A C+ C G+++E CG N ++VY Sbjct: 425 GCYTEATSA-RALSAASLA----SDQLTVDRCATFCSS---FPIFGVEYGRECYCGSALA----AGSVRAPDTDCNFKCSGSSTQTCGAGNRLNVYMKPSSTVTTSASPTSTTSPTLPTSYGTLGCYTEATNGRALKEKSFSDDAMTTQKCAANCAGFKYFGLEYYFECYCGNSLQPGSVQVASTDCKFPCTGDKTQTCGANNRLNLYAFGDSSSLPTPVSXXXXXXXXXXXXYPGYATTGCYTEATNMRALSG-ATYINNGMTVEICASACSGFAMFGVEYGRECYCGASLNSGSVSAPTSECSFVCPGNNNEFCGAGNRLNVY 736
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: A0A6A5TCJ6_9PLEO (Heme peroxidase n=1 Tax=Byssothecium circinans TaxID=147558 RepID=A0A6A5TCJ6_9PLEO) HSP 1 Score: 141 bits (355), Expect = 4.800e-34 Identity = 107/333 (32.13%), Postives = 155/333 (46.55%), Query Frame = 1 Query: 10 GCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDK--CKHLCTAFPDETCGGKEAMEVYSM---------------------GDPAPTPA----------------PA---MIGQA----DMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCGSPGDDPTD-ASLGSCTMACAGDSSETCGGSNAISVY 867 GCY++ R LS +AT+ N ++ CAA+CS T F VEY +C+CG + GS+ C LC + CG + +Y A TP+ PA MIG++ D + A CA FCSGY+YFG +Y EC+C + Y + PS++C PC+GD + +CGG + ++V++ S PV P T +Y Y GC+ DS + R+L+ DS MT CA +C G T+FGT+Y EC+CG+ +P+ C+ C GD E CG N +S+Y Sbjct: 594 GCYSEGSGG-RALSDSATN----SNTLTVQSCAAFCSAT---TYFGVEYGRECYCGNTLN----AGSVPMPATDCNMLCGGSNAQYCGAGNRLNIYQKLPVSSSXXXXXXXXXXXXXXXXXXATTPSGPSVAGYTYVGCLSDSPANRTMIGKSRGTSDNTYAACASFCSGYQYFGAEYSAECYCSNLLE-YMDQKPSSECSMPCAGDSSTSCGGPSRLTVFK----SNTPVRLPRNPTI---ANYTYKGCYTDSVNARVLA-DGYTPDSAMTVEKCAAVCNGYTYFGTQYGGECYCGASLKNPSQKVDERDCSFLCGGDKLEYCGAGNRLSMY 905 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9301.17084.1 >prot_H-paniculata_contig9301.17084.1 ID=prot_H-paniculata_contig9301.17084.1|Name=mRNA_H-paniculata_contig9301.17084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=289bp QSLGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVback to top mRNA from alignment at H-paniculata_contig9301:5262..6712- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9301.17084.1 ID=mRNA_H-paniculata_contig9301.17084.1|Name=mRNA_H-paniculata_contig9301.17084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1451bp|location=Sequence derived from alignment at H-paniculata_contig9301:5262..6712- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9301:5262..6712- >mRNA_H-paniculata_contig9301.17084.1 ID=mRNA_H-paniculata_contig9301.17084.1|Name=mRNA_H-paniculata_contig9301.17084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1734bp|location=Sequence derived from alignment at H-paniculata_contig9301:5262..6712- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |