mRNA_H-paniculata_contig9300.17083.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI) HSP 1 Score: 264 bits (674), Expect = 3.040e-75 Identity = 163/414 (39.37%), Postives = 234/414 (56.52%), Query Frame = 1
Query: 1 SLINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDMRSVPSSLAEDRVPSQATPRSKTLGMTREDLLDKWRHEI---EEKGLAVPNPESALEGALTIREYEGTVLSLGSYVFLDVSWLAKVLEPVLNHKGVEQKGASRM-FGDVKLT--EPWHNHSLRRLIENGILEQRLAQFLWPR-ITEYVLAVLKKIGLTFPLPGDEVGTLVVPLRLPETRPVGVDQDLAELFPDDQISLSVTWKMHDGVPPGAIERIISHCCYLGTADVYWRFGVLV----GVDHDNEVSRLRLDYSTDKKELVVAVWGDLTKAVAWAIICYVCTVVRKMTLQFPGLRWDASLGCPDHPKNVMGISEVRVQRRGDRLIDKRTICRTCRMAGKGAGILASELLEVVEMSNDAGNIL 1209
SL++R++ N + +R +VLP+SW+ + + L G V + + S A + VP+ G+TR DL KW + EE G+++ NP+ ALEGAL IRE+EG+++ +YVFLDV+WLA++L+P+LNH+ E + GD +T E H S RL +G+LE LA LWP ++ YVL L +GLT+PL D LVV LRL E RP V ++L + D LSV WK+ GVPPGAIE++++ CC LGT +WRFGVLV G + L ++YS D E+ + V+G + A WA + Y +V + M +FPGLRW ASL CP H ++ M IS RRGD+L+ T C C G G A +LLE+V++ G+++
Sbjct: 464 SLLHRVMYNNKGE-LRGASLVLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDVVAALEEDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPELAGVLWPDGLSNYVLPTLDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVLSVKWKIFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGMAAKTFALLIEYSHDTCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQD-MQISRTAT-RRGDKLLHGAT-CNLCDSETGGLGAAAIDLLEMVDIRRSRGDLV 873
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Match: A0A6H5L0H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H4_9PHAE) HSP 1 Score: 251 bits (642), Expect = 3.770e-73 Identity = 152/411 (36.98%), Postives = 224/411 (54.50%), Query Frame = 1
Query: 1 SLINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDMRSVPSSLAEDRVPSQATPRSKT---LGMTREDLLDKWR---HEIEEKGLAVPNPESALEGALTIREYEGTVLSLGSYVFLDVSWLAKVLEPVLNHKGVEQKGASRMFGD-----VKLTEPWHNHSLRRLIENGILEQRLAQFLWPR-ITEYVLAVLKKIGLTFPLPGDEVGTLVVPLRLPETRPVGVDQDLAELFPDDQISLSVTWKMHDGVPPGAIERIISHCCYLGTADVYWRFGVLV----GVDHDNEVSRLRLDYSTDKKELVVAVWGDLTKAVAWAIICYVCTVVRKMTLQFPGLRWDASLGCPDHPKNVMGISEVRVQRRGDRLIDKRTICRTCRMAGKGAGILASELLEVVEM 1185
S ++R++ +R +MVLP+SWD A++ + L G V + + SL DR + T KT G+T E+L KW+ E+E +G+ V N ++ALEGAL+IRE++G+++ +VFLDV WLA++L+P+LNHK E GD + L +P S RL G+LE RLA +WP ++EYVL L +GLTFPL D LVV LRL TRP V + + + S +WK+ GVPPGAIE++++ CC LG +WR+GVLV GV + L+YS+ EL ++G ++ AW + YV + VR M + FPGLRW SL CP H + ++ R GD+L++ + C C G G A +L+ +V++
Sbjct: 68 SFLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVL-------HKSLDPDRGNATKTAEGKTDVYQGITVEELGTKWQGTVDELERRGITVTNAKNALEGALSIREFDGSLVRRDKFVFLDVVWLARILKPLLNHKDQENFDGCVNLGDTGDARITLDDPLDIASWDRLKREGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLENDPAEGLVVLLRLKPTRPGSVGKVIETFCSGLTPAFSASWKIFLGVPPGAIEKVLTRCCGLGRVRTFWRYGVLVHGGLGVQDGRSTFAVVLEYSSAGNELTAQIFGGISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMPFVNMARSD--GDKLLEG-SRCPHCSEDTGGLGEAAIDLVRLVDI 468
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 255 bits (651), Expect = 4.800e-72 Identity = 159/406 (39.16%), Postives = 230/406 (56.65%), Query Frame = 1
Query: 1 SLINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDMRSVPSSLAEDRVPSQATPRSKTLGMTREDLLDKWRHEI---EEKGLAVPNPESALEGALTIREYEGTVLSLGSYVFLDVSWLAKVLEPVLNHKGVEQKGASRM-FGDVKLT--EPWHNHSLRRLIENGILEQRLAQFLWPR-ITEYVLAVLKKIGLTFPLPGDEVGTLVVPLRLPETRPVGVDQDLAELFPDDQISLSVTWKMHDGVPPGAIERIISHCCYLGTADVYWRFGVLVGVDHDNEVSR----LRLDYSTDKKELVVAVWGDLTKAVAWAIICYVCTVVRKMTLQFPGLRWDASLGCPDHPKNVMGISEVRVQRRGDRLIDKRTICRTCRMAGKGAGILASELLEVVEM 1185
SL++R++ N + VR +VLP+SW+ A+ + L G V + + S A + VP+ G+TR DL KW + E G++V P+ ALEGAL IRE+EG+++ +YVFLDV+WLA++L+P+LNH+ E + GD +T E H S RL +G+LE LA+ LWP ++ YVL L +GLT+PL D LVV LRL E RP V ++L + D LSV WK+ GVPPGAIE++++ CC LGT +WRFGVLV ++ L ++YS DK E+ + V+G ++ A WA + + +V + M +FPGLRW A+L CP H ++ M IS+ R GD+ + T C C G G A LLE+V++
Sbjct: 500 SLLHRVMYNSKGN-VRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGDGVSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWPDGLSNYVLPALDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVLSVKWKVFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQD-MQISKAAT-RPGDKSLFGAT-CSLCDSKTGGLGAAAMSLLEIVDV 901
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Match: A0A6H5K1K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K4_9PHAE) HSP 1 Score: 249 bits (636), Expect = 7.640e-71 Identity = 147/411 (35.77%), Postives = 225/411 (54.74%), Query Frame = 1
Query: 1 SLINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDMRSVPSSLAEDRVPSQATPRSKTLGMTREDLLDKWRH---EIEEKGLAVPNPESALEGALTIREYEGTVLSLGSYVFLDVSWLAKVLEPVLNHKGVEQKGASRMFGD-----VKLTEPWHNHSLRRLIENGILEQRLAQFLWPR-ITEYVLAVLKKIGLTFPLPGDEVGTLVVPLRLPETRPVGVDQDLAELFPDDQISLSVTWKMHDGVPPGAIERIISHCCYLGTADVYWRFGVLV----GVDHDNEVSRLRLDYSTDKKELVVAVWGDLTKAVAWAIICYVCTVVRKMTLQFPGLRWDASLGCPDHPKNVMGISEVRVQRRGDRLIDKRTICRTCRMAGKGAGILASELLEVVEMSND 1194
S ++R++ +R + VLP+SWD A++ + L G V +++G P ED + G+T E+L KW+ E+E +G+ V N ++ALEGAL++RE++G+++ ++VFLDV WLA++L+P+LNHK E GD + L +P S RL + G+LE +LA +WP ++EYVL L +GLTFPL D LVV LRL RP V + + + S +WK+ GVPPGA+E++++ CC LG +WR+GVLV GV + L+YS+ EL ++GD++ AW + YV + VR M + FPGLRW SL CP H ++ + R R GD+L++ + C C + G G A +L+ V++ D
Sbjct: 241 SFLHRLVNKPDGRGLRGTQTVLPRSWDIALTVLEALEHGRDPVE-AVLGKS---PDPDGEDAAETAGGKTDVYQGITVEELGTKWQETVDELERRGITVTNAKNALEGALSVREFDGSLVRRENFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDITSWDRLKKEGVLEPKLAYAMWPDGLSEYVLPTLASLGLTFPLENDPDEGLVVLLRLKPNRPESVGKVIDTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGGVRTFWRYGVLVHGSLGVQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVRLMLVDFPGLRWKGSLKCPQHGDAMLFVDMAR--RGGDKLLEG-SRCPQCSVDTGGLGAAAIDLVRFVDIRLD 644
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 246 bits (629), Expect = 2.050e-69 Identity = 151/418 (36.12%), Postives = 227/418 (54.31%), Query Frame = 1
Query: 1 SLINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDMRSVPSSLAEDRVPSQATPRSKTL---GMTREDLLDKWRH---EIEEKGLAVPNPESALEGALTIREYEGTVLSLGSYVFLDVSWLAKVLEPVLNHKGVEQKGASRMFGD-----VKLTEPWHNHSLRRLIENGILEQRLAQFLWPR-ITEYVLAVLKKIGLTFPLPGDEVGTLVVPLRLPETRPVGVDQDLAELFPDDQISLSVTWKMHDGVPPGAIERIISHCCYLGTADVYWRFGVLV----GVDHDNEVSRLRLDYSTDKKELVVAVWGDLTKAVAWAIICYVCTVVRKMTLQFPGLRWDASLGCPDHPKNVMGISEVRVQRRGDRLIDKRTICRTCRMAGKGAGILASELLEVVEMSNDAGNI 1206
SL++R++ +R +MVLP+SWD + + L +G V + + SL DR + T T+ G+T EDL KW+ E+E +G+ V N ++ALEGAL+IRE++G+++ ++VFLDV WLA++L+P+LNHK E GD + L +P + S RL G+LE RLA +WP ++EYVL L +GLTFPL GD VV LRL RP V + + +LS +W + GVPPGAIE++++ CC LG +WR+GVLV G + + L+YS+ +L ++GD+ W + YV + V M + FPGLRW +L CP H ++ ++V + G+ + +R C C KG G A +LL +V++ D G I
Sbjct: 356 SLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGRDPVEVVL-------RKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELERRGIIVTNAKNALEGALSIREFDGSLVRHETFVFLDVLWLARILKPLLNHKDQETFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEYVLPTLASLGLTFPLEGDLDEGQVVLLRLKPERPDSVGEVIDTFCSRHTPALSASWNIFLGVPPGAIEKVLTRCCGLGAVQTFWRYGVLVHGGLGDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVT--QAGETFLKRR--CPRCSTETKGLGAAAIDLLRMVDIRMDRGEI 762
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE) HSP 1 Score: 239 bits (611), Expect = 2.190e-68 Identity = 136/369 (36.86%), Postives = 205/369 (55.56%), Query Frame = 1
Query: 1 SLINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDMRSVPSSLAEDRVPSQATPRSKTLGMTREDLLDKWRHEIEE---KGLAVPNPESALEGALTIREYEGTVLSLGSYVFLDVSWLAKVLEPVLNHKGVEQKGASRMFGD-----VKLTEPWHNHSLRRLIENGILEQRLAQFLWPR-ITEYVLAVLKKIGLTFPLPGDEVGTLVVPLRLPETRPVGVDQDLAELFPDDQISLSVTWKMHDGVPPGAIERIISHCCYLGTADVYWRFGVLV----GVDHDNEVSRLRLDYSTDKKELVVAVWGDLTKAVAWAIICYVCTVVRKMTLQFPGLRWDASLGCPDHPKNVMGISEV 1068
SL+ R++ +R +MVLP+SWD A++F+ L G V + M ++S S T + G+T E+L +W+ ++E +G+ V N E+ALEGAL+IRE++G+++ +VFLDV WLA++L+P+LNHK E GD + L +P S RL G+LE RLA +WP ++EYVL L +GL FPL D LVV LRL RP V + + + +WK+ GVPPGA+E++++ CC LG +WR+GVLV GV + + ++YS+ ELV V+GD+++ W + YV + V M + FPGLRW SL CP H ++ +++V
Sbjct: 386 SLLYRLVNKPDQGGLRGVQMVLPRSWDVALTFLDSLEYGRHPVEMVM---LKSPDSDSGATETAGGTTTVYQ--GITVEELSARWQGTVDELGRRGITVTNAENALEGALSIREFDGSLVCHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDPSDIASWDRLKNEGVLEPRLADAIWPDGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGEVIDTFCSGLTPAFRASWKVFLGVPPGAVEKVLTRCCALGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDNELVAQVFGDISRPGPWMAMSYVMSAVSLMLVDFPGLRWKGSLKCPQHGDGMLFVNKV 749
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 244 bits (622), Expect = 3.570e-68 Identity = 149/411 (36.25%), Postives = 225/411 (54.74%), Query Frame = 1
Query: 1 SLINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDMRSVPSSLAEDRVPSQATPRSKTLGMTREDLLDKWRHE---IEEKGLAVPNPESALEGALTIREYEGTVLSLGSYVFLDVSWLAKVLEPVLNHKGVEQKGASRMFGD-----VKLTEPWHNHSLRRLIENGILEQRLAQFLWPR-ITEYVLAVLKKIGLTFPLPGDEVGTLVVPLRLPETRPVGVDQDLAELFPDDQISLSVTWKMHDGVPPGAIERIISHCCYLGTADVYWRFGVLV----GVDHDNEVSRLRLDYSTDKKELVVAVWGDLTKAVAWAIICYVCTVVRKMTLQFPGLRWDASLGCPDHPKNVMGISEVRVQRRGDRLIDKRTICRTCRMAGKGAGILASELLEVVEMSND 1194
SL++R++ +R +MV+P+SWD A++ + L RG V + +V D+ D + A G+T EDL KW+ + + + V N ++ALEGAL IRE++G+++ ++VFLDV WLA++L+P+LNHK E GD V L +P S RL G+LE RLA+ LWP ++EYV+ + +GLTFPL D G LVV LRL RP V + + D +L +WK+ GVP GAIE++++ CC LG +WR GVLV G + + + L+YS EL ++GD++ W + YV + V M L FPGLR SL CP H + M ++ + V R GD++++ + CR C +G G A +L+ +V++ D
Sbjct: 550 SLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEM-VVEDLGDADGG---DATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEYVIPTIASLGLTFPLENDPAGGLVVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGVGEQDRSGIFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQHG-DAMPLANM-VTRTGDKILEG-SRCRQCSPDTRGLGAAAIDLVRMVDIRLD 953
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 242 bits (617), Expect = 4.240e-68 Identity = 143/369 (38.75%), Postives = 203/369 (55.01%), Query Frame = 1
Query: 1 SLINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDMRSVPSSLAEDRVPSQATPRSKTL---GMTREDLLDKWRHEI---EEKGLAVPNPESALEGALTIREYEGTVLSLGSYVFLDVSWLAKVLEPVLNHKGVEQKGASRMFGD-----VKLTEPWHNHSLRRLIENGILEQRLAQFLWPR-ITEYVLAVLKKIGLTFPLPGDEVGTLVVPLRLPETRPVGVDQDLAELFPDDQISLSVTWKMHDGVPPGAIERIISHCCYLGTADVYWRFGVLV----GVDHDNE--VSRLRLDYSTDKKELVVAVWGDLTKAVAWAIICYVCTVVRKMTLQFPGLRWDASLGCPDHPKNVM 1053
SL++R++ +R +MVLP+SWD A++ + L G V + + R P DR + T R +T G+T EDL KW+ + E G+ V N ++ALEGAL IRE++G+++ ++FLDV WLAK+L+P+LNHK E GD + L +P S RL G+LE RLA +WP ++EYVL L +GLTFPL D LVV LRL RP V + D +LS +WK+ GVPPGAIE++++ CC LG +WR+GVLV G H + + L+YS+ EL ++GD++ W ++ YV + V M L FPGLRW SL CP H ++
Sbjct: 406 SLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVL----RKSPDP---DRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEYVLPALAFLGLTFPLEDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPALSASWKIFLGVPPGAIEKVLTRCCGLGGVRTFWRYGVLVHGGLGEVHVGRRGIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTML 767
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 242 bits (618), Expect = 4.550e-68 Identity = 147/418 (35.17%), Postives = 225/418 (53.83%), Query Frame = 1
Query: 1 SLINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDMRSVPSSLAEDRVPSQATPRSKT---LGMTREDLLDKWRHEIEE---KGLAVPNPESALEGALTIREYEGTVLSLGSYVFLDVSWLAKVLEPVLNHKGVEQKGASRMFGD-----VKLTEPWHNHSLRRLIENGILEQRLAQFLWPR-ITEYVLAVLKKIGLTFPLPGDEVGTLVVPLRLPETRPVGVDQDLAELFPDDQISLSVTWKMHDGVPPGAIERIISHCCYLGTADVYWRFGVLV----GVDHDNEVSRLRLDYSTDKKELVVAVWGDLTKAVAWAIICYVCTVVRKMTLQFPGLRWDASLGCPDHPKNVMGISEVRVQRRGDRLIDKRTICRTCRMAGKGAGILASELLEVVEMSNDAGNI 1206
SL+ R++ +R +MVLP+SWD A++ + L G V + ++ S +R P++ T KT + E+L WR ++E +G+ V N E+ALEGAL+IRE++G+++ +VFLDV WLA++L+P+LNHK GD + L + S RL G+LE RLA +WP ++EYVL L +GLTFPL GD LVV LRL RP V + + + S +W++ GVPPGAIE++++ CC LG +WR+GVLV G + + +YS+ EL ++GD++ + W + YV + V M + FPGLRW+ SL CP H + ++V GD+ +++R C C +G G A +L+ +V++ D G I
Sbjct: 337 SLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVLL-------KSPDSERRPTE-TGVGKTNVYQAIKVEELGTNWRETVDELGKRGIVVTNAENALEGALSIREFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGDTGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEYVLPTLASLGLTFPLEGDPDNGLVVLLRLEPNRPASVGEAIDTFCSKYTPAFSASWEIFLGVPPGAIEKVLTRCCGLGDVQTFWRYGVLVHGGLGDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCA--GDKFLERR--CPRCSPQTRGLGAAAIDLIRMVDIRLDRGVI 742
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 242 bits (618), Expect = 8.590e-68 Identity = 151/414 (36.47%), Postives = 229/414 (55.31%), Query Frame = 1
Query: 4 LINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDMRSVPSSLAE-DRVPSQATPRSKT---LGMTREDLLDKWRHEI---EEKGLAVPNPESALEGALTIREYEGTVLSLGSYVFLDVSWLAKVLEPVLNHKGVEQKGASRMFGD-----VKLTEPWHNHSLRRLIENGILEQRLAQFLWPR-ITEYVLAVLKKIGLTFPLPGDEVGTLVVPLRLPETRPVGVDQDLAELFPDDQISLSVTWKMHDGVPPGAIERIISHCCYLGTADVYWRFGVLV----GVDHDNEVSRLRLDYSTDKKELVVAVWGDLTKAVAWAIICYVCTVVRKMTLQFPGLRWDASLGCPDHPKNVMGISEVRVQRRGDRLIDKRTICRTCRMAGKGAGILASELLEVVEMSND 1194
L++R++ +R +MVLP+SWD A++ + L RG V + V LAE DR + T +T G+T E L KW+ + +G+ V N ++ALEGAL+IRE++G+++ +VFLDV WLA++L+P+LNHK E GD V L +P S RL G+LE RLA+ +WP +++YVL L +GLTFPL D G LVV LRL RP V + + D + S +WK+ GVP GAIE++++ CC LG +WR GVLV G + +E+ + L+YS+ EL ++GD++ W + YV + VR M L FPGLR SL CP H ++ ++++ + G +L++ + C C +G G A +L+ +V++ D
Sbjct: 451 LVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEV--------VVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLARRGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCLDQTPAFSTSWKIFLGVPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMT--QAGVKLLEP-SGCPQCSPDTRGLGAAAIDLVSMVDIRLD 853 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9300.17083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9300.17083.1 >prot_H-paniculata_contig9300.17083.1 ID=prot_H-paniculata_contig9300.17083.1|Name=mRNA_H-paniculata_contig9300.17083.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=403bp SLINRIIRNGPADCVRAEEMVLPQSWDFAMSFIGGLSRGERYVRLSMVGDback to top mRNA from alignment at H-paniculata_contig9300:2..3428+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9300.17083.1 ID=mRNA_H-paniculata_contig9300.17083.1|Name=mRNA_H-paniculata_contig9300.17083.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3427bp|location=Sequence derived from alignment at H-paniculata_contig9300:2..3428+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9300:2..3428+ >mRNA_H-paniculata_contig9300.17083.1 ID=mRNA_H-paniculata_contig9300.17083.1|Name=mRNA_H-paniculata_contig9300.17083.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2418bp|location=Sequence derived from alignment at H-paniculata_contig9300:2..3428+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |