Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Phox homologous domain |
| Ec32 ortholog | Ec-02_003980.1 |
| Exons | 4 |
| Model size | 1889 |
| Cds size | 1674 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9252.17041.1 >prot_H-paniculata_contig9252.17041.1 ID=prot_H-paniculata_contig9252.17041.1|Name=mRNA_H-paniculata_contig9252.17041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=558bp
MSKLTVQVVAGTEYPGPVFYEIQHVRDGRTWTVKQRYRTLHAMSQALRAE
NAKLPSHKFPQKRWKFPIFHTPCSNTMPSNELEARRSGLQSYLSSLSELP
DSWNSMAVTSVLCSVDGSLMALAAGPGSVSAAPTKFEDANAADASVVLKS
NDADTTPAPASEPSDCAPTLESSSSHDLSPATVVAADDLDNVPASADKSV
HLSEPSVAEELPAVEAFTENEVDYTPPTPADEQVDCALASESTTSRDLPT
DASATTVDMHIAKSPVDLSADTATVLDLSAADEPPTIIAVVANDNLERSV
DGPADSLEVPKPSPAADEDDTSRTPTEALADPAKKSESSPEADVDDTAST
PAEEAVDAAEAPEPSPEADGDDTPLTPAEEAVDCAEGSEPSPEADGDDTA
STLAEKAVDSAEASESSPEADGDDTPRTLAEEAVDSVEASEPSPEADGDD
TPSAPAEEAMDSPEASELSPEADGDDTPSTPAEEAVDCAEESEPSPEADG
DDTSSARTEEAVDSPEASEPSPEVDGDDTRSAPAEEAVDSPDASEPSPEA
DGDDTPSA back to topmRNA from alignment at H-paniculata_contig9252:2620..7696- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig9252.17041.1 ID=mRNA_H-paniculata_contig9252.17041.1|Name=mRNA_H-paniculata_contig9252.17041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5077bp|location=Sequence derived from alignment at H-paniculata_contig9252:2620..7696- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAAGGAGCTCACAGTAGCGTAACCGATTTCAGATTCCAGATTGCCT
CCCTAGGTCATTACTGTCGCAGGCTTGGCTAACTGCAGGCGTTCCCCACA
TAGTTCCACAGAGTGAAACTCGGCGACTAGTTGTGTTTTGTGTGGCTCAG
ACTCAGTGCTTCTGGAGCATTTATCGACAGAGACGAAGGGCGTGCAACAG
CTAGCTTTCTGAACCATGTCGAAGCTCACAGTGCAAGTGGTGGCTGGCAC
CGAGTACCCTGGTCCGGTATTCTATGAGATTCAGCATGTACGGGATGGCA
GGTATGAGCGAGGTGCAAAGGGGCTGGTGGTTGTTTACTCACAACGCAAG
CCTACTGTGTTTTGTTATCGTCTGTAGTGTAGCTGGTCATCTGCCTGCCT
TCTTGAACACACAGACAGAATATTCTTGACTGAACGTGGGCAGCTCGCAG
TCGTGTATGAGTTTCCTCCCAGGAAAACACCCAGCGACACGATAGGTCAA
ACAGTCAGTCGTGATCCTTTATGCCCCTGTGTCTGAGAATACGGCGTCCA
GTATTCCCGAAAGCCCCTCGCTGCCGCGATATAAGCGGGTGGGCAAAAGT
AGGTGGGAAACATGCTGTGGGTTGACTGGGAGAGGATAATTAGGGCTGTT
TCTAACATCAGATGAATCAGCCTGAGAGAAGAATTTTGAGCAAAGCATCG
AACAGTTCCAGCAGTAATCGCCTGAGGACATACGTCTCAAGTACCATATC
ATCAAGAGATGGAGTGATAAAGAGAGAGGATCATTTATTGCCACTCCATC
TGCCATTGCCACCCCCACCAGCAGCGTGATTGTTGAGTGTCCACGCATCG
GTTCTCTCTCTGGTGTTGCATGTTTATAAGATACGTTTGTATGTTTGAAA
GAGTGGTCGCCACACAATTTCTAAACTTTCTCACACATGAAGAAAAAGAA
CACAAATACTTTCACATACAAATCATTTCGCCGACACTGTCTTGGAAGGA
TAGCACAGTGTGTACTTTGTTCCAAGGTGTGTTCGGAAACAGAACATACT
TCCTCGTGCGTCCATGTACCACCAAGGGCGTTTGGCTGAGAAATCCCTAG
AATCCTATTTGCGTGCCTGCTAACATCTTTGGCTGTGCAGATCTTGCCTA
TTTCCTGGCGCCCAAGTGGAAGGTCCGCGGGACTCTCAAGCATGCGATTC
TTGTTCGTGCATATGAAAATTTGAATAGCATCAACTTCAGCAGATGGACA
CACGCCCTGCATGTACTGCAGACCGTAAATGGAATTTTTGAAGGCATGCC
TAATGGGATGCACCAGCCCACATTCTCCCTCACTTCAGTCACAGACACTC
TCGAGTCAGCACCACTTCAATAACCGAGTTTCACACTGGATTTCCCCATG
CAGGAACCATCGCTCATGGGAGGGGTAGAGTAGCCGCACGTCAAAGGCAT
GGCCTGGCGGAATCTGTGCTGTACCTCAATATTGGGAAATGGAGTTTTGC
TACGTCAATATTGGGACGTGGCGGATTCCGTGTCAAATGGATGACGTCAG
CCTTGGTAAAAAGCAATGTTGTTGACCTAGTGGCTTGTGGCAAGAGTCTG
AAATTGTTCTCCTGTTCAAAGTTCTCTTGAAGTGTAATCAATCAAATCGC
AGAGAGCAATACTGCATTTCATGGCACAACTCGAGCCCTGTCGAAAAATA
TTAGCGTTTTTTGCCACCTGTGCATACATGACTGGTAGGTGTGCGGAAGA
CTACGTTTATCTCTTGTTCCTGTCTGGTTTCTTTTAAAAATTGTCCATGA
TGGCTCCAAAGCACAACAATGCAGTCCTTCATTATGTTGCCATGCCTCAT
CATGTAAATGCATTCCTCTTACGTGCGGTCCTTGCTATGCTGTTGAAATC
GTTCTGGCACAGCTTTCAACCCTTGTGGATCTGCAGTATCTTCTCCAAAA
TGAACTGTGTGGACGCCATATTGGCGCTAACAGTATTTATAGACGGCCCC
CTCGCCTCTTAGTTTGGAGTCAAGTTCATGTGAATATTCATGGTTGGCTG
TGTTTGCTACAGTGTCTTAGGCTACCTGCCGATCTTTCCTGTCACTGTAG
CACTGTAGTTGTGGTGGATTTTTACCAACCCCATTTTCTCTAACGTGATG
GTCTGGAAGGCCGAAACAGTAGGTAATCGACATTAAAATATTGCCAACAT
CACTGCTGTCAGTACCCTGAGAACCGTCTTGCCGAGAAAGAATATATATA
TATTAAAATACGCTTTTCCTTGTTTTGTGTGGCCAGGACGTGGACCGTTA
AACAGCGCTATCGGACTCTGCACGCTATGTCGCAAGCGTTACGGGCGGAA
AACGCTAAGCTACCATCTCACAAGTTCCCTCAAAAGCGATGGAAATTTCC
GATTGTGAGTGCTGCGTGTTCTTCGAAAGTACTCCCAGCAGTGGCTGACA
GACTTGATGCCGTCAACGCAAGGAGTTCGCCGCAAAGTACACGCTCGTAT
CACCGCTCTGCGCGCTCAACATATACTGGGGATCGACTGGTGAAACGCTT
CTAATATTTTGCGTAGTGTATGGGTGGTTTGGTTTTTCACATAATACAGG
TATGGGCAAAGTTTTTACAGGAGAGGAATGTTTCGTTCCTTGTCCAGCCT
GCCTTCGTTTTCGTTGAACCCAATTCATACAGTTCGTGAAATAGATGTCG
GCAATCGTGGTATGTCAACATTTTGGAAGATTCCCGCAGATGGTACCTAG
TGCTGAGCTTACCCACCGTAACGACTAAAACTCCCTCGCATATTCCTCCT
CTCTCCTCCGTATTCCCGACCGAATGTGCACGTGTTTCGCGTTCGCATCT
TATTGCGCCCCGCTATTTGTTTCATGTTTGGCTCGAAAAACCAAAATGCC
ATGTTTAAAAATGGACTGACGGAAAACCTTCGTGACGCTGAACAACCGGT
CGTGAACAAAAGTTCCACACTCCCTGCTCCAACACGATGCCTTCGAATGA
GCTTGAAGCGCGTCGAAGTGGCTTGCAATCGTACCTATCATCCTTGAGCG
AGCTGCCGGATTCCTGGAATTCAATGGCGGTGACCAGCGTCCTATGTTCT
GTGGATGGATCACTGATGGCCCTGGCTGCTGGTCCGGGGAGTGTTAGTGC
GGTGAGATGAGGCAGTCGCGTAAATATCACGTGTAGGCGTGGAAAAATAT
TGCCTACGTAGAGACGTTGCCTTTGAGGGGAATTGGGTGAAAATTGAATG
GAGCTCATCTGGCGGTGGTGTGCCGTGAAATCGGCAGAGCTTGCACTCGC
TGTACTTCCTCTGCTGCAGAGCAAATCACATCTGGCTACGTTTATGCACA
AGCCATCTGGTCGTATCGTACAAGGCAAGACTTGCACATGTACTGGTACG
TCACCAAAGAAAGCAGGAAATGACAGCAAGCGTTGTCCTGGCGAATGATT
ATCCTCATGAATTCCTGCTCTTGTCTAGCTTCATATGATTTTCTGGTAGA
ATCAATGTTGAAAAAGTAGATATATCATTTGATAATGCGAGCGAAGCGAG
CCGGCTGCGCGAAACGTCAGGTGAGCGCTTTGTCCCGAGTGCAAGCCCTC
TCTCTGCTACTGATTGAGTCTCGCCAGAGACACTATTGCATACGTAAGAC
GTATTTTCTACGGAAGACATATTTTTTTTTTTTTTTTTTTAACCCCCGGA
AGGCTAGGCTGAAACCCTTACCGCTACTTCCACTCATACGGAAGACATAT
TTTCTGACGATCGTCCTGTGGGTTCATCTGTTTTCATTTGTCACAGGCAC
CCACGAAGTTTGAAGATGCTAACGCAGCGGATGCGTCGGTAGTGTTGAAG
TCCAATGATGCCGATACCACTCCGGCGCCCGCAAGTGAACCGTCCGACTG
TGCTCCAACTCTAGAGTCATCGAGCTCGCATGACCTCTCTCCTGCAACCG
TGGTTGCTGCCGATGACCTGGATAACGTACCGGCATCCGCTGATAAATCG
GTCCACCTTTCCGAGCCATCGGTCGCCGAAGAACTCCCTGCCGTTGAAGC
GTTCACGGAGAACGAGGTTGATTACACCCCGCCGACGCCCGCCGATGAGC
AGGTGGACTGTGCTTTGGCGTCCGAGTCAACGACTTCCCGTGACCTCCCT
ACTGACGCGTCGGCCACGACAGTTGACATGCACATCGCAAAGTCACCCGT
TGATTTGTCGGCCGACACCGCAACCGTGCTCGATCTGTCAGCCGCTGATG
AACCACCCACCATCATAGCGGTCGTGGCGAACGACAATTTAGAGAGGTCG
GTTGATGGACCCGCCGATTCCCTTGAGGTGCCCAAGCCATCACCTGCAGC
GGACGAGGATGACACCTCGCGTACTCCGACCGAGGCACTGGCCGACCCCG
CAAAGAAATCTGAGTCATCCCCCGAGGCGGACGTCGACGACACGGCATCG
ACTCCGGCCGAGGAAGCGGTGGACGCCGCCGAGGCGCCCGAGCCGTCACC
AGAGGCGGACGGCGACGACACGCCGTTGACTCCGGCCGAGGAAGCGGTGG
ACTGCGCTGAGGGATCCGAGCCGTCCCCAGAGGCGGATGGCGACGACACC
GCGTCGACTCTAGCTGAGAAAGCGGTGGACTCTGCGGAGGCGTCCGAGTC
GTCACCCGAGGCGGACGGCGACGATACCCCGCGTACTCTGGCTGAGGAAG
CGGTGGACTCCGTCGAGGCGTCCGAGCCGTCACCCGAGGCGGACGGCGAC
GACACCCCGTCGGCTCCAGCTGAGGAAGCGATGGACTCCCCCGAGGCTTC
CGAGCTGTCACCCGAGGCGGACGGCGACGACACGCCGTCGACTCCGGCCG
AGGAAGCTGTGGACTGCGCTGAGGAATCCGAGCCGTCACCCGAAGCGGAC
GGCGACGACACCTCGTCGGCTCGAACTGAGGAAGCGGTGGACTCCCCGGA
GGCGTCCGAGCCGTCACCCGAGGTGGACGGCGACGACACCCGGTCGGCTC
CAGCTGAGGAAGCGGTGGACTCCCCGGATGCTTCCGAGCCGTCACCCGAG
GCGGACGGCGACGACACCCCGTCGGCT back to topCoding sequence (CDS) from alignment at H-paniculata_contig9252:2620..7696- >mRNA_H-paniculata_contig9252.17041.1 ID=mRNA_H-paniculata_contig9252.17041.1|Name=mRNA_H-paniculata_contig9252.17041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3348bp|location=Sequence derived from alignment at H-paniculata_contig9252:2620..7696- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGAAGCTCACAGTGCAAGTGGTGGCTGGCACCGAGTACCCTGGTCC
GGTATTCTATGAGATTCAGCATGTACGGGATGGCAGATGTCGAAGCTCAC
AGTGCAAGTGGTGGCTGGCACCGAGTACCCTGGTCCGGTATTCTATGAGA
TTCAGCATGTACGGGATGGCAGGACGTGGACCGTTAAACAGCGCTATCGG
ACTCTGCACGCTATGTCGCAAGCGTTACGGGCGGAAAACGCTAAGCTACC
ATCTCACAAGTTCCCTCAAAAGCGATGGAAATTTCCGATTGACGTGGACC
GTTAAACAGCGCTATCGGACTCTGCACGCTATGTCGCAAGCGTTACGGGC
GGAAAACGCTAAGCTACCATCTCACAAGTTCCCTCAAAAGCGATGGAAAT
TTCCGATTTTCCACACTCCCTGCTCCAACACGATGCCTTCGAATGAGCTT
GAAGCGCGTCGAAGTGGCTTGCAATCGTACCTATCATCCTTGAGCGAGCT
GCCGGATTCCTGGAATTCAATGGCGGTGACCAGCGTCCTATGTTCTGTGG
ATGGATCACTGATGGCCCTGGCTGCTGGTCCGGGGAGTGTTAGTGCGTTC
CACACTCCCTGCTCCAACACGATGCCTTCGAATGAGCTTGAAGCGCGTCG
AAGTGGCTTGCAATCGTACCTATCATCCTTGAGCGAGCTGCCGGATTCCT
GGAATTCAATGGCGGTGACCAGCGTCCTATGTTCTGTGGATGGATCACTG
ATGGCCCTGGCTGCTGGTCCGGGGAGTGTTAGTGCGGCACCCACGAAGTT
TGAAGATGCTAACGCAGCGGATGCGTCGGTAGTGTTGAAGTCCAATGATG
CCGATACCACTCCGGCGCCCGCAAGTGAACCGTCCGACTGTGCTCCAACT
CTAGAGTCATCGAGCTCGCATGACCTCTCTCCTGCAACCGTGGTTGCTGC
CGATGACCTGGATAACGTACCGGCATCCGCTGATAAATCGGTCCACCTTT
CCGAGCCATCGGTCGCCGAAGAACTCCCTGCCGTTGAAGCGTTCACGGAG
AACGAGGTTGATTACACCCCGCCGACGCCCGCCGATGAGCAGGTGGACTG
TGCTTTGGCGTCCGAGTCAACGACTTCCCGTGACCTCCCTACTGACGCGT
CGGCCACGACAGTTGACATGCACATCGCAAAGTCACCCGTTGATTTGTCG
GCCGACACCGCAACCGTGCTCGATCTGTCAGCCGCTGATGAACCACCCAC
CATCATAGCGGTCGTGGCGAACGACAATTTAGAGAGGTCGGTTGATGGAC
CCGCCGATTCCCTTGAGGTGCCCAAGCCATCACCTGCAGCGGACGAGGAT
GACACCTCGCGTACTCCGACCGAGGCACTGGCCGACCCCGCAAAGAAATC
TGAGTCATCCCCCGAGGCGGACGTCGACGACACGGCATCGACTCCGGCCG
AGGAAGCGGTGGACGCCGCCGAGGCGCCCGAGCCGTCACCAGAGGCGGAC
GGCGACGACACGCCGTTGACTCCGGCCGAGGAAGCGGTGGACTGCGCTGA
GGGATCCGAGCCGTCCCCAGAGGCGGATGGCGACGACACCGCGTCGACTC
TAGCTGAGAAAGCGGTGGACTCTGCGGAGGCGTCCGAGTCGTCACCCGAG
GCGGACGGCGACGATACCCCGCGTACTCTGGCTGAGGAAGCGGTGGACTC
CGTCGAGGCGTCCGAGCCGTCACCCGAGGCGGACGGCGACGACACCCCGT
CGGCTCCAGCTGAGGAAGCGATGGACTCCCCCGAGGCTTCCGAGCTGTCA
CCCGAGGCGGACGGCGACGACACGCCGTCGACTCCGGCCGAGGAAGCTGT
GGACTGCGCTGAGGAATCCGAGCCGTCACCCGAAGCGGACGGCGACGACA
CCTCGTCGGCTCGAACTGAGGAAGCGGTGGACTCCCCGGAGGCGTCCGAG
CCGTCACCCGAGGTGGACGGCGACGACACCCGGTCGGCTCCAGCTGAGGA
AGCGGTGGACTCCCCGGATGCTTCCGAGCCGTCACCCGAGGCGGACGGCG
ACGACACCCCGTCGGCTGCACCCACGAAGTTTGAAGATGCTAACGCAGCG
GATGCGTCGGTAGTGTTGAAGTCCAATGATGCCGATACCACTCCGGCGCC
CGCAAGTGAACCGTCCGACTGTGCTCCAACTCTAGAGTCATCGAGCTCGC
ATGACCTCTCTCCTGCAACCGTGGTTGCTGCCGATGACCTGGATAACGTA
CCGGCATCCGCTGATAAATCGGTCCACCTTTCCGAGCCATCGGTCGCCGA
AGAACTCCCTGCCGTTGAAGCGTTCACGGAGAACGAGGTTGATTACACCC
CGCCGACGCCCGCCGATGAGCAGGTGGACTGTGCTTTGGCGTCCGAGTCA
ACGACTTCCCGTGACCTCCCTACTGACGCGTCGGCCACGACAGTTGACAT
GCACATCGCAAAGTCACCCGTTGATTTGTCGGCCGACACCGCAACCGTGC
TCGATCTGTCAGCCGCTGATGAACCACCCACCATCATAGCGGTCGTGGCG
AACGACAATTTAGAGAGGTCGGTTGATGGACCCGCCGATTCCCTTGAGGT
GCCCAAGCCATCACCTGCAGCGGACGAGGATGACACCTCGCGTACTCCGA
CCGAGGCACTGGCCGACCCCGCAAAGAAATCTGAGTCATCCCCCGAGGCG
GACGTCGACGACACGGCATCGACTCCGGCCGAGGAAGCGGTGGACGCCGC
CGAGGCGCCCGAGCCGTCACCAGAGGCGGACGGCGACGACACGCCGTTGA
CTCCGGCCGAGGAAGCGGTGGACTGCGCTGAGGGATCCGAGCCGTCCCCA
GAGGCGGATGGCGACGACACCGCGTCGACTCTAGCTGAGAAAGCGGTGGA
CTCTGCGGAGGCGTCCGAGTCGTCACCCGAGGCGGACGGCGACGATACCC
CGCGTACTCTGGCTGAGGAAGCGGTGGACTCCGTCGAGGCGTCCGAGCCG
TCACCCGAGGCGGACGGCGACGACACCCCGTCGGCTCCAGCTGAGGAAGC
GATGGACTCCCCCGAGGCTTCCGAGCTGTCACCCGAGGCGGACGGCGACG
ACACGCCGTCGACTCCGGCCGAGGAAGCTGTGGACTGCGCTGAGGAATCC
GAGCCGTCACCCGAAGCGGACGGCGACGACACCTCGTCGGCTCGAACTGA
GGAAGCGGTGGACTCCCCGGAGGCGTCCGAGCCGTCACCCGAGGTGGACG
GCGACGACACCCGGTCGGCTCCAGCTGAGGAAGCGGTGGACTCCCCGGAT
GCTTCCGAGCCGTCACCCGAGGCGGACGGCGACGACACCCCGTCGGCT back to top
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