mRNA_H-paniculata_contig9240.17033.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 151 bits (382), Expect = 1.040e-36 Identity = 100/257 (38.91%), Postives = 135/257 (52.53%), Query Frame = 3
Query: 237 FQGHAVHPPDAVSHGEAACAPLKGSIPWSISPANRRRCGHPLKGMSYGVHEHSWCDNRECKLWLRESWKSRP*T-SLCGQQRSVLMIDDYTCHRDQKFQESLKKEVNTGHHPHFWRPNSG*PVLRPHAKQGNEAQGARKIHFRGRN*QGRVESG*TQAPREGRGVNMGQGR-----------LEPNTG*PERKYFKICGLNFNLDGSDDYQWSEHTFGKDYYRTILTEQQRAEGEDIH-GIILESLQLPVVQG*WTA 968
F+G PP G+A P K SI W + PANR + G P+ GMS+GV E SWCD RECKLW+++SWK RP S+ Q+R +L++DD+ CH+D F +LK+E NT + P P+L+P + N+ K RG ++ + P+ G+ G+G + P T + FKICGL LDGS+D+ W H FG D YR +L EQQR E H + L LQLP V TA
Sbjct: 294 FKGTPFVPPATPGKGKAT-QPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANT---IVIFIPGGLTPLLQPLDRMLNKQM---KRLLRGMYTAHTAKA--ARDPKTGKLAPPGRGAVATWCKNAWASITPETA---KTCFKICGLTLALDGSEDHAWCLHNFG-DGYRELL-EQQRVEWLAEHPNVTLPPLQLPKVPAESTA 536
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Match: A0A6H5K3D3_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D3_9PHAE) HSP 1 Score: 151 bits (381), Expect = 6.470e-36 Identity = 96/249 (38.55%), Postives = 136/249 (54.62%), Query Frame = 3
Query: 237 FQGHAVHPPDAVSHGEAACAPLKGSIPWSISPANRRRCGHPLKGMSYGVHEHSWCDNRECKLWLRESWKSRP*T-SLCGQQRSVLMIDDYTCHRDQKFQESLKKEVNTGHHPHFWRPNSG*PVLRPHAKQGNEAQGARKIHFRGRN*QGRVESG*TQAPREGRGVNMGQGR-----------LEPNTG*PERKYFKICGLNFNLDGSDDYQWSEHTFGKDYYRTILTEQQRAEGEDIH-GIILESLQLP 944
F+G PP G+A P K SI W + PANR + G P+ GMS+GV E SWCD RECK+W+++SWK RP S+ Q+R +L++DD+ CH+D F +LK+E NT + P P+L+P + N+ +++ RG ++ + P+ G+ V +G+G + P T + FKICGL LDGS+D+ W H FG D YR +L EQQR E H + L LQLP
Sbjct: 21 FKGTPFVPPATPGKGKAT-QPRKNSIAWEVLPANRSKHGVPVGGMSFGVQEESWCDLRECKVWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANT---IVIFIPGGLTPLLQPLDRMLNKQM--KRLLRRGMYTAHTAKA--ARDPKTGKLVPLGRGAVATWCKNAWASITPET---VKTCFKICGLTLALDGSEDHAWCLHNFG-DGYRELL-EQQRVEWLAEHPNVTLPPLQLP 256
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 146 bits (368), Expect = 2.100e-35 Identity = 89/244 (36.48%), Postives = 123/244 (50.41%), Query Frame = 3
Query: 237 FQGHAVHPPDAVSHGEAACAPLKGSIPWSISPANRRRCGHPLKGMSYGVHEHSWCDNRECKLWLRESWKSRP*TSLCGQQRS-VLMIDDYTCHRDQKFQESLKKEVNTGHHPHFWRPNSG*PVLRPHAKQGNEAQGA---RKIHFRGRN*QGRVESG*TQAPREGRGVNMGQGRLEPNTG*PERKYFKICGLNFNLDGSDDYQWSEHTFGKDYYRTILTEQQRAEGEDIHGIILESLQLPVVQG 956
F+G PP G++ P K S+ W I PANR + GHP GMS+GV E SW D REC W+ SWK RP QQR +L++DD+ CH+D+ F +LK++ NT + P P+L+P + N+ RK + SG + P G + E +T + F ICGL LDGS+D+ W EH FG+DY R +L EQ+ + + L L+LP V G
Sbjct: 174 FKGTPFTPPTVSGKGKSTL-PRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANT---IVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDY-RDLLEEQRAVWLAEHADVTLPPLKLPKVPG 412
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Match: A0A6H5KKC9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC9_9PHAE) HSP 1 Score: 145 bits (367), Expect = 5.340e-35 Identity = 93/239 (38.91%), Postives = 126/239 (52.72%), Query Frame = 3
Query: 237 FQGHAVHPPDAVSHGEAACAPLKGSIPWSISPANRRRCGHPLKGMSYGVHEHSWCDNRECKLWLRESWKSRP*TSLCGQQRS-VLMIDDYTCHRDQKFQESLKKEVNTGHHPHFWRPNSG*PVLRPHAKQGNEAQGARKIHFRGRN*QGRVESG*TQAPREGRGVNMGQGRLEPNTG*PERKYFKICGLNFNLDGSDDYQWSEHTFGKDYYRTILTEQQRAEGEDIHGIILESLQLPVV 950
FQG PP G++ P K S+ W I PANR + GHP GMS+GV E SW D REC W+ SWK RP QQR +L++DD+ CH+D+ F +LK++ NT + P P+L+P + N+ Q R + +G V S + R GR +G + P T + FKICGL LDGS+D+ W EH FG+DY R +L EQ + + L L+LP V
Sbjct: 239 FQGTPFIPPTVSGKGKSTL-PRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANT---IVIFTPGGLTPLLQPLDRTLNK-QMKRLL-------RGNVGS----SLRGGRK----RGSITPET---VKTCFKICGLTLALDGSEDHAWCEHNFGEDY-RDLLEEQHAVWLAEHPDVTLPPLKLPKV 453
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 146 bits (369), Expect = 5.890e-35 Identity = 99/257 (38.52%), Postives = 134/257 (52.14%), Query Frame = 3
Query: 237 FQGHAVHPPDAVSHGEAACAPLKGSIPWSISPANRRRCGHPLKGMSYGVHEHSWCDNRECKLWLRESWKSRP*T-SLCGQQRSVLMIDDYTCHRDQKFQESLKKEVNTGHHPHFWRPNSG*PVLRPHAKQGNEAQGARKIHFRGRN*QGRVESG*TQAPREGRGVNMGQGR-----------LEPNTG*PERKYFKICGLNFNLDGSDDYQWSEHTFGKDYYRTILTEQQRAEGEDIH-GIILESLQLPVVQG*WTA 968
F+G PP G+A P K SI W + PANR + G P+ GMS+GV E SWCD RE KLW+++SWK RP S+ Q+R +L++DD+ CH+D F +LK+E NT + P P+L+P + N+ K RG ++ + P+ G+ G+G + P T + FKICGL LDGS+D+ W H FG D YR +L EQQR E H + L LQLP V TA
Sbjct: 287 FKGTPFVPPATPGKGKAT-QPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANT---IVIFIPGGLTPLLQPLDRMLNKQM---KRLLRGMYTAHTAKA--ARDPKTGKLAPPGRGAVATWCKNAWASITPET---VKTCFKICGLTLALDGSEDHAWCLHNFG-DGYRELL-EQQRVEWLAEHPNVTLPPLQLPKVPAESTA 529
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 139 bits (349), Expect = 9.560e-34 Identity = 87/242 (35.95%), Postives = 118/242 (48.76%), Query Frame = 3
Query: 237 FQGHAVHPPDAVSHGEAACAPLKGSIPWSISPANRRRCGHPLKGMSYGVHEHSWCDNRECKLWLRESWKSRP*TSLCGQQRS-VLMIDDYTCHRDQKFQESLKKEVNTGHHPHFWRPNSG*PVLRPHAKQGNEAQGARKIHFR-GRN*QGRVESG*TQAPREGRGVNMGQGRLEPNTG*PERKYFKICGLNFNLDGSDDYQWSEHTFGKDYYRTILTEQQRAEGEDIHGIILESLQLPVVQG 956
F+G P +G++ P K S+ W I PANR + GHP GMS+GV E SW D REC W SWK RP QQR +L++DD+ CH+D+ F +LK++ NT + P P+L+P + R H + SG + P G + E T + FKICGL LDGS+D+ W H FG+DY R +L EQ + + L L+LP V G
Sbjct: 19 FKGTPFTSPTVSGNGKSTL-PRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANT---IVIFIPGGLTPLLQPLDLNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDY-RDLLEEQHAVWLAEHPNVTLPPLKLPKVPG 255
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE) HSP 1 Score: 142 bits (359), Expect = 1.530e-33 Identity = 98/257 (38.13%), Postives = 131/257 (50.97%), Query Frame = 3
Query: 237 FQGHAVHPPDAVSHGEAACAPLKGSIPWSISPANRRRCGHPLKGMSYGVHEHSWCDNRECKLWLRESWKSRP*T-SLCGQQRSVLMIDDYTCHRDQKFQESLKKEVNTGHHPHFWRPNSG*PVLRPHAKQGNEAQGARKIHFRGRN*QGRVESG*TQAPREGRGVNMGQGR-----------LEPNTG*PERKYFKICGLNFNLDGSDDYQWSEHTFGKDYYRTILTEQQRAEGEDIH-GIILESLQLPVVQG*WTA 968
F+G PP G+A P K SI W + PANR + G P++GMS+GV E SWCD RECKLW++ SWK RP S+ Q+R +L++DD+ CH+D F +LK+E NT + P P+L+ + N+ Q R + P+ G+ G+G + P T + FKICGL LDGS+D+ W H FG D YR +L EQQR E H + L LQLP V TA
Sbjct: 299 FKGTPFVPPATPGKGKAT-QPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANT---IVIFIPGGLTPLLQLLDRMLNK-QMKRLLXXXXXX----XXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPET---VKTCFKICGLTLALDGSEDHAWCLHNFG-DGYRELL-EQQRVEWLAEHPNVTLPPLQLPKVPAESTA 541
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 138 bits (348), Expect = 8.000e-33 Identity = 87/242 (35.95%), Postives = 119/242 (49.17%), Query Frame = 3
Query: 237 FQGHAVHPPDAVSHGEAACAPLKGSIPWSISPANRRRCGHPLKGMSYGVHEHSWCDNRECKLWLRESWKSRP*TSLCGQQRS-VLMIDDYTCHRDQKFQESLKKEVNTGHHPHFWRPNSG*PVLRPHAKQGNEAQGARKIHFRGRN*QGRV---ESG*TQAPREGRGVNMGQGRLEPNTG*PERKYFKICGLNFNLDGSDDYQWSEHTFGKDYYRTILTEQQRAEGEDIHGIILESLQLPVV 950
F G PP G++ P K S+ W + P NR + GHP GMS+GV E SW D REC W SWK RP QQR +L++DD+ CH+D+ F +LK++ NT + P P+L+P + N+ Q R + + SG + P G +G E T + FKICGL LDGS+D+ W H FG+DY R +L EQ + + L L+LP V
Sbjct: 108 FMGTPFIPPTVSGKGKSTL-PRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANT---IVIFIPGGLTPLLQPLDRMLNK-QTKRLLRSKYTAYSASATDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDY-RDLLEEQHAVWLAEHPNVTLPPLKLPKV 343
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Match: A0A6H5KRF0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF0_9PHAE) HSP 1 Score: 137 bits (344), Expect = 3.220e-31 Identity = 88/241 (36.51%), Postives = 120/241 (49.79%), Query Frame = 3
Query: 237 FQGHAVHPPDAVSHGEAACAPLKGSIPWSISPANRRRCGHPLKGMSYGVHEHSWCDNRECKLWLRESWKSRP*TSLCGQQRS-VLMIDDYTCHRDQKFQESLKKEVNTGHHPHFWRPNSG*PVLRPHAKQGNEAQGARKIHFRGRN*QGRVESG*TQAPREGRGVNMGQGRLEPNTG*PERKYFKICGLNFNLDGSDDYQWSEHTFGKDYYRTILTEQQRAEGEDIHGIILESLQLPVVQG 956
F+G PP G++ P K S+ W I P NR + GHP GMS+GV E SW D REC W+ SWK RP QQR +L++DD+ CH+D+ F +LK++ NT F+ P P+L+P + N+ K RG++ RV GR +G+ G FKICGL LDGS D+ E+ FGKDY R + EQ + + L L+LP + G
Sbjct: 471 FKGTPFIPPTVSGKGKSTL-PRKNSVAWEIHPVNRVKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTI--VIFFIPGGLTPLLQPLDRMLNKQM---KRLLRGKHRLQRVG---------GRRRPVGEAEATGAWGRLYVTCFKICGLTLALDGSKDHARCEYNFGKDY-RDLFEEQHAVWLAEHPDVTLPPLKLPKIPG 695
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.190e-29 Identity = 80/224 (35.71%), Postives = 110/224 (49.11%), Query Frame = 3
Query: 237 FQGHAVHPPDAVSHGEAACAPLKGSIPWSISPANRRRCGHPLKGMSYGVHEHSWCDNRECKLWLRESWKSRP*TSLCGQQRS-VLMIDDYTCHRDQKFQESLKKEVNTGHHPHFWRPNSG*PVLRPHAKQGNEAQGARKIHFRGR------N*QGRVESG*TQAPREGRGVNMGQGRLEPNTG*PERKYFKICGLNFNLDGSDDYQWSEHTFGKDYYRTILTEQ 887
F+G PP G++ P K S+ W I PANR + GHP G+S+GV E SW D REC W+ WK RP QQR +L++DD+ H+D+ F +LK++ NT + P P+L+P N+ K RG+ + SG + P G + E T + FKICGL LDGS+D+ W EH G+DY R + EQ
Sbjct: 55 FKGTPFTPPTVSGKGKSTL-PRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANT---IVIFIPGGLTPLLQPLDCMLNKQM---KRLLRGKYIAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNVGEDY-RDLFEEQ 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9240.17033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9240.17033.1 >prot_H-paniculata_contig9240.17033.1 ID=prot_H-paniculata_contig9240.17033.1|Name=mRNA_H-paniculata_contig9240.17033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp MGVRYAPGADRKKTHSMWVQVHGNIMVRTHVPTTKMYLYSTVGRHSVVMSback to top mRNA from alignment at H-paniculata_contig9240:7197..8513+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9240.17033.1 ID=mRNA_H-paniculata_contig9240.17033.1|Name=mRNA_H-paniculata_contig9240.17033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1317bp|location=Sequence derived from alignment at H-paniculata_contig9240:7197..8513+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9240:7197..8513+ >mRNA_H-paniculata_contig9240.17033.1 ID=mRNA_H-paniculata_contig9240.17033.1|Name=mRNA_H-paniculata_contig9240.17033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig9240:7197..8513+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |