mRNA_H-paniculata_contig9228.17023.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Match: D8LRI8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI8_ECTSI) HSP 1 Score: 313 bits (802), Expect = 2.030e-89 Identity = 157/294 (53.40%), Postives = 203/294 (69.05%), Query Frame = 2
Query: 1124 EGRFSDGLMDVQHTAGVSGGEEVAEDQAPIDGHGDRKGDQGSEFNENDSHHHILTSLSEDHRAFTASAGEKEQHRLVQQCLAYANGDIQQAQKVCGKFCKFRVENGWSMLLSPAELEVPLRSRTHTLAQSRDKIGRAILTFSPGKMDMTKCPAASYQKMLCYVLQEVVKDEELQTEGIVLLVDARNVGFNTLKHFKMTDYRRGLGMLSGAFPAKLKAIRILHPTRALRVALAIGMPLMSSKMQARLQVVSDEGALEGSFTKDLADPAVVPMELGIGGTWEDSKAFWDSWVDGRV 2005
+GR + + + GE V E + G G + + + + +L LS+ F SAG++E+ RL+ QCL YAN D+ A KVC FCKFR++ GW ++LS ELE PLRSR HTL +RD+ GR +LTFSPGK+DM K P A+Y KMLCYVLQEV+KDEELQT+G+VLLVDAR VGF L+ F + DY+RGL ML GAFPAK+KAIRILH R + +AL I MPL+S+KM+AR++ V+DE A +GSFTK+LADP+ +P+ELGI GTW S+ FWD WV RV
Sbjct: 542 DGRAGTPMFRGESEKSIKAGEGVGESSGVLGGGGKHEEELEERYQQ------LLAGLSKTELEFVESAGDEEKTRLLHQCLEYANYDMAGAIKVCSTFCKFRLQEGWDLVLSAPELETPLRSRVHTLTTNRDRTGRGVLTFSPGKLDMDKAPPAAYHKMLCYVLQEVIKDEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVIGMALKIAMPLLSAKMRARVEFVTDERASDGSFTKELADPSSIPVELGIKGTWTGSRDFWDEWVVRRV 829
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Match: A0A6H5JJW0_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW0_9PHAE) HSP 1 Score: 310 bits (793), Expect = 7.880e-88 Identity = 150/245 (61.22%), Postives = 187/245 (76.33%), Query Frame = 2
Query: 1280 ILTSLSEDHRAFTASAGEKEQHRLVQQCLAYANGDIQQAQKVCGKFCKFRVENGWSMLLSPAELEVPLRSRTHTLAQSRDKIGRAILTFSPGKMDMTKCPAASYQKMLCYVLQEVVKDEELQTEGIVLLVDARNVGFNTLKHFKMTDYRRGLGMLSGAFPAKLKAIRILHPTRALRVALAIGMPLMSSKMQAR---LQVVSDEGALEGSFTKDLADPAVVPMELGIGGTWEDSKAFWDSWVDGRV 2005
+L LS+ F SAG++E+ RL+QQCL YAN D+ A KVC FCKFR++ GW ++LS ELE PLRSR HTL +RD+ GR +LTFSPGK+DM K P A+Y KMLCYVLQEV+KD+ELQT+G+VLLVDAR VGF L+ F + DY+RGL ML GAFPAK+KAIRILH R +R AL+I MPL+S+KM+AR ++ V+DE A +GSFTK+LADP+ +P+ELGI GTW S FWD WV RV
Sbjct: 623 LLAGLSKKELEFVESAGDEEKTRLLQQCLEYANYDMAGAVKVCSTFCKFRLQEGWDLVLSARELETPLRSRVHTLTTNRDRTGRGVLTFSPGKLDMDKAPPAAYHKMLCYVLQEVIKDKELQTKGLVLLVDARGVGFGLLRRFTLVDYKRGLRMLGGAFPAKVKAIRILHLNRVIRFALSIAMPLLSAKMRARQCKVEFVTDERASDGSFTKELADPSSIPVELGIKGTWTGSHDFWDEWVGRRV 867
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Match: A0A6M2CP91_RHIMP (Putative phosphatidylinositol transfer protein sec14 n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CP91_RHIMP) HSP 1 Score: 73.9 bits (180), Expect = 1.610e-10 Identity = 52/202 (25.74%), Postives = 90/202 (44.55%), Query Frame = 2
Query: 1379 GDIQQAQKVCGKFCKFRVENG-WSMLLSPAELEVPLRSRTHTLAQSRDKIGRAILTFSPGKMDMTKCPAASYQKMLCYVLQEVVKDEELQTEGIVLLVDARNVGFNTLKHFKMTDYRRGLGMLSGAFPAKLKAIRILHPTRALRVALAIGMPLMSSKMQARLQVVSDEGALEGSFTKDLADPAVVPMELGIGGTWEDSKAFW 1981
GD+ A++ + K R + P+ + R RT T+ S+D +GR +L PG + + + QK L ++ + D QT GI +VD+ + L + + + RR L L P +LKA+ I+H ++A+ + P + K+ RL G+ + K++ P +P E G D + FW
Sbjct: 65 GDVDAARRTVRNYYKNRASYPQFYCNFVPSSINEETR-RTMTILPSKDVLGRPVLLHKPGLLPLDRDAYDMGQKALFICIERIAADPVSQTTGISFIVDSAGFSLDRLFYCNLNNIRRTLDYLQDCMPIRLKALHIVHESKAIDFLYGLLRPFLRRKLTERLHF---HGSNYENLLKEIP-PQTLPKECGGDADDLDFEGFW 261
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Match: A0A1E1XT10_9ACAR (Putative phosphatidylinositol transfer protein sec14 (Fragment) n=1 Tax=Amblyomma sculptum TaxID=1581419 RepID=A0A1E1XT10_9ACAR) HSP 1 Score: 73.6 bits (179), Expect = 1.660e-10 Identity = 42/160 (26.25%), Postives = 82/160 (51.25%), Query Frame = 2
Query: 1484 RSRTHTLAQSRDKIGRAILTFSPGKMDMTKCPAASYQKMLCYVLQEVVKDEELQTEGIVLLVDARNVGFNTLKHFKMTDYRRGLGMLSGAFPAKLKAIRILHPTRALRVALAIGMPLMSSKMQARLQVVSDEGALEGSFTKDLADPAVVPMELGIGGTWE 1963
+++ +++ RD GR ++ F G D + C + + K +L+ ++ DE++Q +GIV+++D + +G L H ++ + + +P +LKAI + + + + AI P MS K+ R+ ++ E S D+ V+P E G GT+E
Sbjct: 85 KNKLAAVSRHRDSCGRGVILFRSGPWDSSICSISEFIKASLILLEWLLLDEDVQKQGIVIVLDYKGIGLEHLMHLTPFVMKKIVHITEKCYPVRLKAIYVTNDSAVFDILFAITRPFMSGKLLDRVHLMG----YEISDLLDILPSDVIPEEAG--GTFE 238
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Match: UPI001E1DA0C0 (alpha-tocopherol transfer protein-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA0C0) HSP 1 Score: 73.6 bits (179), Expect = 2.670e-10 Identity = 45/167 (26.95%), Postives = 74/167 (44.31%), Query Frame = 2
Query: 1454 LSPAELEVPLRSRTHTLAQSRDKIGRAILTFSPGKMDMTKCPAASYQKMLCYVLQEVVKDEELQTEGIVLLVDARNVGFNTLKHFKMTDYRRGLGMLSGAFPAKLKAIRILHPTRALRVALAIGMPLMSSKMQARLQVVSDEGALEGSFTKDLA---DPAVVPMELG 1945
+ P+ ++ L + RDK GR +L F PG+ D +K P K L ++++DEE Q GI++L D + VGF +R + +L FP +LK + ++ + A+ M K+ R+ V G +LA D +P+E G
Sbjct: 96 MRPSAVKHVLEDGVTGVLPQRDKFGRRVLVFRPGRWDPSKYPVPHVFKTNFMTLSKLIEDEETQVSGIIMLADLKGVGFGHATQMTPFFAKRIVSLLQDTFPMRLKGVHYVNEPTVFDIVFAVARQFMRKKLLERIHV-------HGKNMNELAEFIDLEHLPVEYG 255
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Match: UPI0014590B56 (alpha-tocopherol transfer protein-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014590B56) HSP 1 Score: 72.8 bits (177), Expect = 4.920e-10 Identity = 52/189 (27.51%), Postives = 84/189 (44.44%), Query Frame = 2
Query: 1382 DIQQAQKVCGKFCKFRVENGWSML-LSPAELEVPLRSRTHTLAQSRDKIGRAILTFSPGKMDMTKCPAASYQKMLCYVLQEVVKDEELQTEGIVLLVDARNVGFNTLKHFKMTDYRRGLGMLSGAFPAKLKAIRILHPTRALRVALAIGMPLMSSKMQARLQVVSDEGALEGSFTKDLADPAVVPMELG 1945
D +A ++ K +VEN P+ ++ L + SRDK GR + F PGK D ++ P + L +++++EE Q GIV+++D + +G+N K +R G+L AFPA+ K + LH +I + K +RL SD + D A +P E G
Sbjct: 67 DYDRAFQLIMNHYKMKVENRELFTNFRPSAVKHVLDDGVTGVLSSRDKEGRRVCIFRPGKWDPSRYPLDDVFRTNFMTLTKLIEEEETQVNGIVMVIDLKEMGWNHAKCISPFYAKRISGLLQDAFPARFKGLHYLHEPSFFDYVFSIMKQFLKEKTVSRLHFHSDRV----EELTEYIDKANLPKEYG 251
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Match: C3ZTV8_BRAFL (CRAL-TRIO domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZTV8_BRAFL) HSP 1 Score: 72.8 bits (177), Expect = 5.270e-10 Identity = 50/200 (25.00%), Postives = 95/200 (47.50%), Query Frame = 2
Query: 1499 TLAQSRDKIGRAILTFSPGKMDMTKCPAASYQKMLCYVLQEVVKDEELQTEGIVLLVDARNVGFNTLKHFKMTDYRRGLGMLSGAFPAKLKAIRILHPTRALRVALAIGMPLMSSKMQARLQVVSDEGALEGSFTKDLADPAVVPMELG--------IGGTWEDS-KAFWDSWVD----GRVRAVT*KLKTVGAAVLSGV 2059
T+ RDK GR ++ F PGK D P + L +++V++DEE Q G++++++ + N H ++ AFPA++K + ++ + L A+ P M K++ R+++ G + S +L V+P ELG +G W++ +F D+ V+ G ++ +VG A ++G+
Sbjct: 110 TVLPGRDKEGRKLIVFRPGKWDPAAWPIYDNARALILSMEKVIEDEETQVNGLMVIMEVSGITANHAYHIGPRYASTMTNIIQEAFPARIKGMHFVNESAFLDTVFAVIRPFMKEKLKQRIKM---HGNVYESL-HELTGTEVLPTELGGEGGPLEEMGKEWKEKLHSFEDAMVESNKFGMLKLGELGKSSVGDATMAGM 305
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Match: A0A6P3W9A8_CLUHA (retinaldehyde-binding protein 1a n=3 Tax=Clupeidae TaxID=55118 RepID=A0A6P3W9A8_CLUHA) HSP 1 Score: 72.4 bits (176), Expect = 6.830e-10 Identity = 42/174 (24.14%), Postives = 85/174 (48.85%), Query Frame = 2
Query: 1454 LSPAELEVPLRSRTHTLAQSRDKIGRAILTFSPGKMDMTKCPAASYQKMLCYVLQEVVKDEELQTEGIVLLVDARNVGFNTLKHFKMTDYRRGLGMLSGAFPAKLKAIRILHPTRALRVALAIGMPLMSSKMQARLQVVSDEGALEGSFTKDLADPAVVPMELGIGGTWEDSKA 1975
++P + + + + +RD GRA+L F+ D+ + + C +L++++++EE Q G L+ + + K T+ ++ + M+ +FPA+ KA+ ++H + P M SK+ R+ V ++ L+G F + DP ++P + G G+ D KA
Sbjct: 130 MTPEAVRSTIEAGYPRILSTRDCYGRAVLLFNIENWDLEEVTFDEVLRAYCVILEKLLENEETQINGFCLIENFKGFTMQHASGIKHTELKKMVDMMQDSFPARFKAVHVVHQPWYFTTTYNVVKPFMKSKLLERVFVHGED--LDGYFKE--FDPEILPADFGGKGSDCDGKA 299
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Match: Q6PC74_DANRE (Cellular retinaldehyde-binding protein a n=13 Tax=Cyprinoidei TaxID=30727 RepID=Q6PC74_DANRE) HSP 1 Score: 71.6 bits (174), Expect = 1.230e-9 Identity = 51/212 (24.06%), Postives = 97/212 (45.75%), Query Frame = 2
Query: 1334 KEQHRLVQQCLAYANGDIQQAQKVCGKFCKFR------VENGWSMLLSPAELEVPLRSRTHTLAQSRDKIGRAILTFSPGKMDMTKCPAASYQKMLCYVLQEVVKDEELQTEGIVLLVDARNVGFNTLKHFKMTDYRRGLGMLSGAFPAKLKAIRILHPTRALRVALAIGMPLMSSKMQARLQVVSDEGALEGSFTKDLADPAVVPMELGIG 1951
KE L+ + + D+ +A ++ + +FR EN L+P + + + + +RDK GR +L F+ D+ + + C +L++++++EE Q G VL+ + + K T+ ++ + ML +FPA+ KA+ ++H + P M SK+ R+ V DE L+G + +D + P G G
Sbjct: 89 KEPDSLLLRFIRARKFDVARAHELMKGYVRFRRDYPELFEN-----LTPEAVRSTIEAGYPRILSTRDKNGRVVLLFNIDNWDLEEVTFDETLRAYCVILEKLLENEETQINGFVLIENFKGFTMQHASGIKHTELKKMVDMLQDSFPARFKAVHVIHQPWYFTTTYNVVKPFMKSKLLERVFVHGDE--LDG-YLRDFGAEILPPDFDGTG 292
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Match: UPI001E1D2ABC (alpha-tocopherol transfer protein-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2ABC) HSP 1 Score: 71.6 bits (174), Expect = 1.270e-9 Identity = 47/167 (28.14%), Postives = 79/167 (47.31%), Query Frame = 2
Query: 1454 LSPAELEVPLRSRTHTLAQSRDKIGRAILTFSPGKMDMTKCPAASYQKMLCYVLQEVVKDEELQTEGIVLLVDARNVGFNTLKHFKMTDYRRGLGMLSGAFPAKLKAIRILHPTRALRVALAIGMPLMSSKMQARLQVVSDEGALEGSFTKDLA---DPAVVPMELG 1945
L P+ ++ L + + RD+ GR ++ F PGK D TK + L ++V++EE Q GI+LL D + +G+ + FK RR +G+L +FP + K I ++ + A+ P M K+ R+ GS ++L+ D +P E G
Sbjct: 98 LRPSAVKHVLDAGVTGVLPHRDRQGRRVMIFRPGKWDPTKYAIDDIFRANFISLTKLVEEEEAQINGIILLADLKGMGWKQTRRFKPLLARRLIGLLQDSFPMRFKGIHYVNEPVVFDMVFAVIRPFMKQKILDRIH-------FHGSKYEELSEFIDTQYLPSEYG 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9228.17023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9228.17023.1 >prot_H-paniculata_contig9228.17023.1 ID=prot_H-paniculata_contig9228.17023.1|Name=mRNA_H-paniculata_contig9228.17023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=660bp MLFIAAPSGVGNSNSNSNKDKPGVVSPERVQQEHTPKARGVHGIVLTPSDback to top mRNA from alignment at H-paniculata_contig9228:1225..7748+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9228.17023.1 ID=mRNA_H-paniculata_contig9228.17023.1|Name=mRNA_H-paniculata_contig9228.17023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6524bp|location=Sequence derived from alignment at H-paniculata_contig9228:1225..7748+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9228:1225..7748+ >mRNA_H-paniculata_contig9228.17023.1 ID=mRNA_H-paniculata_contig9228.17023.1|Name=mRNA_H-paniculata_contig9228.17023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3960bp|location=Sequence derived from alignment at H-paniculata_contig9228:1225..7748+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |