mRNA_H-paniculata_contig9220.17020.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Match: A0A6H5JCW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW3_9PHAE) HSP 1 Score: 161 bits (407), Expect = 1.710e-43 Identity = 78/134 (58.21%), Postives = 103/134 (76.87%), Query Frame = 1
Query: 124 IKHLHLQVDNCVGENKNNIRMGFLTMLVWNGIIDVVEVNFMMVGHTHIKIDQIFSRFAVGVRGKNIFTRSQQSEILKESYKHLPVPCTTLTNEANFKNLLEGSTNNIPNVTKFRAFRIEQE-DADIVVRVKNNM 522
I+H H QVDNC ENKNN +GF +LV +I VVE+NFMMVGHTH+KIDQIFSRF+ G++GKNIFTR+Q +E+L+ SY +PV C+TL NE NF LL+G N +P++T +RAFR+E+ D + VRVK++M
Sbjct: 14 IQHAHWQVDNCASENKNNFFLGFAGLLVAASVIRVVEINFMMVGHTHMKIDQIFSRFSRGIKGKNIFTRTQLAEVLQASYTEVPVFCSTLGNEGNFNGLLQGRVNRVPDITTYRAFRVEKGGDGRVKVRVKHHM 147
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE) HSP 1 Score: 155 bits (393), Expect = 8.170e-41 Identity = 76/134 (56.72%), Postives = 100/134 (74.63%), Query Frame = 1
Query: 124 IKHLHLQVDNCVGENKNNIRMGFLTMLVWNGIIDVVEVNFMMVGHTHIKIDQIFSRFAVGVRGKNIFTRSQQSEILKESYKHLPVPCTTLTNEANFKNLLEGSTNNIPNVTKFRAFRIEQE-DADIVVRVKNNM 522
I+H H QVDNCV ENKNN +G+ +LV ++ VVE++FMMVGHTH KIDQ+FSRF+ G++GKNIFTR+ +E L+ SY +PV C+TL NE NFK LL G N +PN+T +RAFR+E+ D + VRVK +M
Sbjct: 217 IQHAHWQVDNCVSENKNNFFLGYAGLLVAADVVRVVEIHFMMVGHTHTKIDQVFSRFSRGIKGKNIFTRTHLAEELRASYTEVPVFCSTLRNEGNFKGLLIGRVNRVPNITTYRAFRVEKGGDGRVKVRVKKHM 350
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Match: A0A6H5KN27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN27_9PHAE) HSP 1 Score: 140 bits (352), Expect = 4.090e-38 Identity = 83/156 (53.21%), Postives = 103/156 (66.03%), Query Frame = 1
Query: 88 WAAL----CEWSKALQ---IKHLHLQVDNCVGENKNNIRMGFLTMLVWNGIIDVVEVNFMMVGHTHIKIDQIFSRFAVGVRGKNIFTRSQQSEILKESYKHLPVPCTTLTNEANFKNL-LEGSTNN---IPNVTKFRAFRIEQEDADIVVRVKNNM 522
W AL W+K Q IK LHLQ+DNCVGENKNNI + F+ LV G+I EV F++VGHTHIKIDQ+FSRF+VG G++IFTRSQ E+ +ESYK LPV TLTN NFK L L+ + N I N+T FRAFR+ + ++ V K M
Sbjct: 19 WLALKRLSAMWTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFM 174
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Match: A0A6H5KA02_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA02_9PHAE) HSP 1 Score: 138 bits (348), Expect = 4.390e-35 Identity = 77/137 (56.20%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 124 IKHLHLQVDNCVGENKNNIRMGFLTMLVWNGIIDVVEVNFMMVGHTHIKIDQIFSRFAVGVRGKNIFTRSQQSEILKESYKHLPVPCTTLTNEANFKNL-LEGSTNN---IPNVTKFRAFRIEQEDADIVVRVKNNM 522
IK LHLQ+DNCVGENKNNI + F+ LV G+I EV F++VGHTHIKIDQ+FSRF+VG G++IFTRSQ E+ +ESYK LPV TLTN NFK L L+ + N I N+T FRAFR+ + ++ V K M
Sbjct: 150 IKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFM 286
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.840e-33 Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 1
Query: 118 LQIKH----LHLQVDNCVGENKNNIRMGFLTMLVWNGIIDVVEVNFMMVGHTHIKIDQIFSRFAVGVRGKNIFTRSQQSEILKESYKHLPVPCTTLTNEANFKNLLEGSTNNIPNVTKFRAFRIEQEDADIVVRVKNNM 522
LQ KH + +Q+DN V ENKNN MGFL LV G++ V + FMMVGHTHI+IDQ+FS FA V+G +FTR +E + +YK LPV C TL N ANFK+L++ T IPN+TKF+AF I +E IV +VK +
Sbjct: 476 LQWKHSLGDVFIQMDNTVSENKNNFIMGFLAALVGRGVMRSVTLCFMMVGHTHIQIDQVFSCFARSVKGCAVFTREHLAEFFESAYKTLPVKCRTLENLANFKDLVQPVTRRIPNITKFQAFNISKEGTAIVAKVKTKL 614
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Match: A0A6H5KAY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY2_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.360e-32 Identity = 70/118 (59.32%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 88 WAAL----CEWSKALQ---IKHLHLQVDNCVGENKNNIRMGFLTMLVWNGIIDVVEVNFMMVGHTHIKIDQIFSRFAVGVRGKNIFTRSQQSEILKESYKHLPVPCTTLTNEANFKNL 420
W AL W+K Q IK LHLQ+DNCVGENKNNI + F+ LV G+I EV F++VGHTHIKIDQ+FSRF+VG G++IFTRSQ E+ +ESYK LPV TLTN NFK L
Sbjct: 19 WLALKRLSAMWTKPGQRFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGL 136
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Match: A0A6H5JTH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH9_9PHAE) HSP 1 Score: 130 bits (326), Expect = 7.800e-32 Identity = 87/186 (46.77%), Postives = 110/186 (59.14%), Query Frame = 1
Query: 4 GRVPDA--TDAWYRKLPCDDSIVAQHRAPFWAAL----CEWSKALQ---IKHLHLQVDNCVGENKNNIRMGFLTMLVWNGIIDVVEVNFMMVGHTHIKIDQIFSRFAVGVRGKNIFTRSQQSEILKESYKHLPVPCTTLTNEANFKNL-LEGSTNN---IPNVTKFRAFRIEQEDADIVVRVKNNM 522
GR+P A T A L C S + W AL W+K Q IK LHLQ+ NCVGE KNNI + F+ LV G++ EV F++VGHT IKID +FSRF+VG G++IFTRSQ E+ +ESYK LPV TLTN NFK L L+ + N I N+T FRAFR+ + ++ V K M
Sbjct: 265 GRIPIAPQTAACVPALLCGGSNLVC--TALWLALKRLSAMWAKPGQRFYIKRLHLQLHNCVGEKKNNIVLAFIGGLVAAGVVVSAEVCFLIVGHTLIKIDHVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFM 448
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Match: A0A6H5KK38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK38_9PHAE) HSP 1 Score: 127 bits (319), Expect = 6.550e-31 Identity = 69/131 (52.67%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 106 WSKA---LQIKHLHLQVDNCVGENKNNIRMGFLTMLVWNGIIDVVEVNFMMVGHTHIKIDQIFSRFAVGVRGKNIFTRSQQSEILKESYKHLPVPCTTLTNEANFKNL----LEGSTNNIPNVTKFRAFRI 477
W+K IK LHLQ+DNCVGENKNNI M F+ LV G+I EV F++VGHTH K DQ+FSR +VG G++IFTR Q E+ +ESY+ LPV T TN NFK L ++ + I N+T FRAFR+
Sbjct: 256 WNKPGERFHIKRLHLQLDNCVGENKNNIVMAFIGGLVAAGVIGSAEVCFLIVGHTHTKTDQVFSRLSVGTLGRSIFTRIQLGELFRESYRELPVRIGTPTNLGNFKGLYLADIKLNLRKIRNMTTFRAFRV 386
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Match: A0A6H5JAR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAR9_9PHAE) HSP 1 Score: 125 bits (314), Expect = 8.900e-31 Identity = 74/156 (47.44%), Postives = 92/156 (58.97%), Query Frame = 1
Query: 88 WAAL----CEWSKA---LQIKHLHLQVDNCVGENKNNIRMGFLTMLVWNGIIDVVEVNFMMVGHTHIKIDQIFSRFAVGVRGKNIFTRSQQSEILKESYKHLPVPCTTLTNEANFKNLLEGSTN----NIPNVTKFRAFRIEQEDADIVVRVKNNM 522
W AL W+K IK HLQ+DNCVGENKNNI M F+ LV G+I EV F+++GHTHIKIDQ+FSR VG G++IFT+ Q E+ +ESYK LPV LTN N K L I N+ FRAFR+ + ++ V VK M
Sbjct: 19 WLALKRLSAMWTKPGERFHIKRRHLQLDNCVGENKNNIVMAFIGGLVAAGVIGFAEVCFLILGHTHIKIDQVFSRLFVGTLGRSIFTKIQLGELFRESYKELPVHVGILTNLGNLKGLYLADNKLNLRKIRNIATFRAFRVGKVAGEVSVWVKRFM 174
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Match: A0A6H5JXN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN7_9PHAE) HSP 1 Score: 124 bits (311), Expect = 5.620e-30 Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = 1
Query: 148 DNCVGENKNNIRMGFLTMLVWNGIIDVVEVNFMMVGHTHIKIDQIFSRFAVGVRGKNIFTRSQQSEILKESYKHLPVPCTTLTNEANFKNL-LEGSTNN---IPNVTKFRAFRIEQEDADIVVRVKNNM 522
DNCVGENKNNI + F+ LV G+I EV F++VGHTHIKIDQ+FSRF+VG G++IFTRSQ E +ESYK LPV TLTN NFK L L+ + N I NVTKF AFR+ + ++ V K M
Sbjct: 213 DNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGERFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRRIRNVTKFWAFRVGKVAGEVSVWAKRFM 341 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9220.17020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9220.17020.1 >prot_H-paniculata_contig9220.17020.1 ID=prot_H-paniculata_contig9220.17020.1|Name=mRNA_H-paniculata_contig9220.17020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp CGRVPDATDAWYRKLPCDDSIVAQHRAPFWAALCEWSKALQIKHLHLQVDback to top mRNA from alignment at H-paniculata_contig9220:928..2507- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9220.17020.1 ID=mRNA_H-paniculata_contig9220.17020.1|Name=mRNA_H-paniculata_contig9220.17020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1580bp|location=Sequence derived from alignment at H-paniculata_contig9220:928..2507- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9220:928..2507- >mRNA_H-paniculata_contig9220.17020.1 ID=mRNA_H-paniculata_contig9220.17020.1|Name=mRNA_H-paniculata_contig9220.17020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig9220:928..2507- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |