mRNA_H-paniculata_contig920.17007.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig920.17007.1
Unique NamemRNA_H-paniculata_contig920.17007.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: D8LG69_ECTSI (Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG69_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 7.400e-120
Identity = 203/296 (68.58%), Postives = 225/296 (76.01%), Query Frame = 3
Query:  324 DLRPSDLTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWSLGDP-----SEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAPPGAGGWPIYGSGDGGGGGLARALVDASR-GDGAAGILEGVTVGIPVEFNVE----GLRECF 1181
            D+RPS+L EACI QM RSSWLN FV RC DSAR +AEAAD RQANGTL GPLDGIPYAAKDN CTLGV TTASSA L  FTP YDST T RL++ G+ L+GKTNMDEFGMGSGTLFS +G TLNPWS   P     +E    +PGGSSGGSAAAVSSG  F ALGSDTGGSVR P AFCG+VG KPTYGLIPRHGLIAYASSLDT G++ RS+LD+AMVLDV+AG DSRDSTC P G         G  GGGG A  L+ A+  G  ++  LEGVTVGIP EFNVE    G+RE +
Sbjct:   42 DVRPSELAEACIKQMERSSWLNCFVTRCFDSARLEAEAADARQANGTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQVGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSPESPGDEKNTEAPFLVPGGSSGGSAAAVSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSILDAAMVLDVVAGPDSRDSTCIPAG--------KGRAGGGGFASDLLGAAAAGSSSSWPLEGVTVGIPKEFNVEELDAGVREAW 329          
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A6H5KIR5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR5_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 1.740e-116
Identity = 201/296 (67.91%), Postives = 225/296 (76.01%), Query Frame = 3
Query:  324 DLRPSDLTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWSLGDP-----SEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAPPGAGGWPIYGSGDGGGGGLARALVDASR-GDGAAGILEGVTVGIPVEFNVE----GLRECF 1181
            D+RPS+L EACI Q+ RSSWLN FV RC +SAR +A AAD RQANGTL GPLDGIPYAAKDN CTLGV TTASSA L  FTP YDST T RL++AG+ L+GKTNMDEFGMGSGTLFS +G TLNPWS   P     +E   F+PGGSSGGSAAAVSSG  F ALGSDTGGSVR P AFCG+VG KPTYGLIPRHGLIAYASSLDT G++ RSVLD+AMVLDV+AG D +DSTC P G         G  GGGG A  L+ A+  G  ++  LEGVTVGIP EFNVE    G+RE +
Sbjct:   21 DVRPSELAEACIKQIERSSWLNCFVTRCFNSARLEAGAADARQANGTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSRESPGDEENTEAPFFVPGGSSGGSAAAVSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSVLDAAMVLDVVAGPDPKDSTCIPAG--------KGHAGGGGFASDLLKAAAAGSSSSWPLEGVTVGIPKEFNVEELDVGVREAW 308          
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A6A5AUD5_9STRA (Amidase domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AUD5_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.260e-71
Identity = 132/227 (58.15%), Postives = 157/227 (69.16%), Query Frame = 3
Query:  342 LTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTL-GVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWS--LGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAP 1013
            LT+ACI Q+  +   N FV    DSA ++A  +D R+ +G   GPLDGIP   KD  C   GVPTTASS IL+ F   Y+STAT+RL  AG   LGK NMDEF MGSGT +S  GPT+NPWS  LGD    +A + GGSSG SAAAV+SG CF ALGSDTGGSVR P A+CG+ G KP YG I RHG+IA+ASSLDT GI+ ++V D+A+VL  IAG D  DST  P
Sbjct:   43 LTQACIDQIEATKRFNMFVATTFDSALARASESDARRRDGRARGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSDLGD----RALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTVRDAAIVLHAIAGPDGHDSTALP 265          
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A7C3YR34_9FIRM (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C3YR34_9FIRM)

HSP 1 Score: 232 bits (592), Expect = 2.100e-70
Identity = 127/250 (50.80%), Postives = 163/250 (65.20%), Query Frame = 3
Query:  267 VRMLRTKDTARKNGLKHTSDLRPSDLTEACIAQMGR-SSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWSLGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAP 1013
            V++L  K+ A  + L    ++   ++T + + ++ R    + +FV    + A + A  AD R A G   GPL GIP A KDN+CT G+PTT SS ILENF P YD+    RL  AG  ++GKTN+DEF MGS T  S    T NPW+          +PGGSSGGSAAAV++G   FALGSDTGGS+R P +FCG+VG KPTYGL+ R+GL+A+ASSLD IG +TR+V D A+VL  IAG D RDSTCAP
Sbjct:    2 VKLLYQKNIAELHELLVRREVSAEEVTRSVLDRVDRVEGKIKAFVTVTREQALASAREADRRLAAGDAAGPLTGIPMALKDNMCTKGIPTTCSSRILENFVPPYDAAVVERLAGAGAVMVGKTNLDEFAMGSSTENSAFFTTSNPWN-------PEMVPGGSSGGSAAAVAAGEAIFALGSDTGGSIRQPASFCGVVGMKPTYGLVSRYGLVAFASSLDQIGPLTRTVTDCALVLQAIAGPDHRDSTCAP 244          
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A1V9YGS0_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGS0_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.110e-69
Identity = 146/282 (51.77%), Postives = 172/282 (60.99%), Query Frame = 3
Query:  342 LTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCT-LGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWS--LGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAPPGAG-GWPIYGSGDGGGGGLARALVDASRGDGAAGILEGVTVGIPVEFNVEGLRE 1175
            LTEACI Q+  +  LN FV    D AR+ A A+D R+A GT  GPLDGIP A KD  C    VPTT  S IL+ F   Y+STAT+RL  AG   LGK NMDEFGMGS T +S  G T+NPWS  LGD     A + GGSSG SAAA++SG CF ALGSDTGGSVR P A+CG+ G KP YG I RHG+IAYASSLDT  + T++  D+A+VL ++AG D +DST    G    W                  D S        L GVTVG+P E+ VE L E
Sbjct:   33 LTEACIRQIEATRGLNMFVAETIDDARAAAVASDARRAAGTAKGPLDGIPIAVKDIFCMDNSVPTTCGSKILQGFRAPYESTATQRLLDAGAVPLGKLNMDEFGMGSATKYSTFGATINPWSKNLGD----DALVAGGSSGASAAAIASGCCFAALGSDTGGSVRQPAAYCGVTGIKPNYGRISRHGMIAYASSLDTPALFTKTARDAALVLPLLAGPDGKDSTAIQDGVPHDW---------------LPTDVSH-------LRGVTVGVPNEYFVEELPE 288          
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A7H1N053_9PROT (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Defluviicoccus vanus TaxID=111831 RepID=A0A7H1N053_9PROT)

HSP 1 Score: 236 bits (602), Expect = 1.410e-69
Identity = 135/277 (48.74%), Postives = 174/277 (62.82%), Query Frame = 3
Query:  339 DLTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWSLGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAPPGAGGWPIYGSGDGGGGGLARALVDASRGDGAAGILEGVTVGIPVEFNVEGL 1169
            +LT ACI  M     LN+F+   PD A  +A AAD R+A+G   G LDGIP A KD  CT GV TTA+S IL+ F P Y+ST +  L+ AG  +LGKTN+DEF MGS  + S +GP  NPW    P +G+  +PGGSSGGSAAAV++ +CF A G+DTGGS+R P +FCGIVG KPTYG   R G++A+ASSLD  G MTR+V D+A++L  +AG D +DST AP      P Y                A  GD     + G+ VG+P E+ V+G+
Sbjct:   26 ELTRACIEVMAARRDLNAFITETPDLALERAAAADARRASGESAGSLDGIPIAIKDLFCTEGVLTTAASHILDGFVPPYESTVSANLRNAGAVMLGKTNLDEFAMGSANITSYYGPVKNPWG---PRDGKDLVPGGSSGGSAAAVAAHACFAATGTDTGGSIRQPASFCGIVGLKPTYGRCSRWGIVAFASSLDQAGPMTRNVRDAAIMLGSMAGHDPKDSTSAPRPV---PNY--------------EQALSGD-----IRGLRVGVPKEYRVDGM 277          
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: W4H4Y8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4Y8_9STRA)

HSP 1 Score: 236 bits (603), Expect = 3.130e-69
Identity = 131/227 (57.71%), Postives = 157/227 (69.16%), Query Frame = 3
Query:  342 LTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTL-GVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWS--LGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAP 1013
            LT+ACI Q+  +   N FV    DSA ++A  +D R+ +G   GPLDGIP   KD  C   GVPTTASS IL+ F   Y+STAT+RL  AG   LGK NMDEF MGSGT +S  GPT+NPWS  LGD    +A + GGSSG SAAAV+SG CF ALGSDTGGSVR P A+CG+ G KP YG I RHG+IA+ASSLDT GI+ +++ D+A+VL  IAG D  DST  P
Sbjct:   43 LTQACIDQIEATKRFNMFVATTFDSALARASESDARRRDGRACGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSDLGD----RALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTIRDAAIVLHAIAGPDGHDSTALP 265          
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: W7TVN2_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVN2_9STRA)

HSP 1 Score: 238 bits (607), Expect = 3.890e-69
Identity = 141/281 (50.18%), Postives = 174/281 (61.92%), Query Frame = 3
Query:  333 PSDLTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWS-LGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAPPGAGGWPIYGSGDGGGGGLARALVDASRGDGAAGILEGVTVGIPVEFNVEGLR 1172
            P  + + C+++   +S LNSFV     +A  +A  A     +  + GPL GIP A KDN CT GV TTASS +L NF P Y +TA  RL+ +G  ++GKTNMDEFGMGS TLFS  G T+NPWS   +  +      GGSSGGSA AV++GS   ALGSDTGGSVR P AFCG+VG KPTYG + RHGLIAYASSLD  G++TR+V D+A+VLDV+AG D  DSTC        P     D            +SR  G A  L G+ VGIP EF ++ L 
Sbjct:   93 PFSVMQRCLSRQQETSGLNSFVTVLRHAAEKEAAVAG---RHSVMKGPLHGIPIAVKDNFCTAGVRTTASSRMLANFVPPYSATAVSRLEASGAIVVGKTNMDEFGMGSATLFSHFGKTINPWSQAAEKGDKPRLAAGGSSGGSAVAVATGSALAALGSDTGGSVRQPAAFCGLVGLKPTYGRVSRHGLIAYASSLDCPGVLTRTVADAALVLDVVAGRDPLDSTCLEQ-----PHRPCFD-----RTMEAAASSRAAGLAVSLRGLKVGIPAEFAIQELE 360          
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A024UMY2_9STRA (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit, variant 3 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMY2_9STRA)

HSP 1 Score: 230 bits (587), Expect = 3.570e-68
Identity = 128/227 (56.39%), Postives = 154/227 (67.84%), Query Frame = 3
Query:  342 LTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLG-VPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWS--LGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAP 1013
            LT+AC+ Q+  +   N FV    D+A   A  AD R+ +G   GPLDGIP   KD  C    VPTTA S IL+ F   Y+STAT+RL  AG   LGK NMDEF MGSGT +S  GPT+NPWS  LG+    QA + GGSSG SAAAV+SG CF ALGSDTGGSVR P A+CG+ G KP YG I RHG+IA+ASSLDT GI+T+++ D+++VL  IAG D  DST  P
Sbjct:   44 LTQACMDQIEATRGFNMFVATTFDAALEHAAEADKRRRDGRARGPLDGIPVGVKDIFCMRNAVPTTACSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSKNLGE----QALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILTKTIRDASIVLQAIAGPDGHDSTALP 266          
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: UPI0012D42F02 (glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D42F02)

HSP 1 Score: 231 bits (590), Expect = 1.150e-67
Identity = 120/230 (52.17%), Postives = 151/230 (65.65%), Query Frame = 3
Query:  318 TSDLRPSDLTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWSLGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTC 1007
            T  + P D+T+ C+    R   LN F+ RC + A  QA+ +  R   G  +G LDGIP A KDN C  G+PTT +S +LENF PSY++T   RL  AG   +GKTN+DEF MGSG + S+ GPT N W   D       I GGSSGGSA AV+SGSCF ALGSDTGGSVR P ++CG++G KPTYGL+ RHGLI   +S+D   I+TR+V D   +L+ IAG DS D+TC
Sbjct:   18 TKSVDPKDVTKLCLDLSHRYKHLNYFISRCDEQAAEQAQQSSERWQKGKPMGELDGIPIAVKDNFCVKGLPTTCASRMLENFVPSYNATPFNRLNDAGAVFMGKTNLDEFSMGSGAVDSIFGPTKNVWRSDD-----GHIAGGSSGGSAVAVASGSCFAALGSDTGGSVRNPASYCGLIGLKPTYGLVSRHGLIPLVNSMDVPAILTRTVDDCVAILNTIAGPDSNDATC 242          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG69_ECTSI7.400e-12068.58Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KIR5_9PHAE1.740e-11667.91Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A6A5AUD5_9STRA1.260e-7158.15Amidase domain-containing protein n=2 Tax=Aphanomy... [more]
A0A7C3YR34_9FIRM2.100e-7050.80Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
A0A1V9YGS0_9STRA1.110e-6951.77Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A7H1N053_9PROT1.410e-6948.74Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 ... [more]
W4H4Y8_9STRA3.130e-6957.71Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
W7TVN2_9STRA3.890e-6950.18Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A024UMY2_9STRA3.570e-6856.39Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]
UPI0012D42F021.150e-6752.17glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig920contigH-paniculata_contig920:26346..30085 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.0
Seed ortholog evalue2.6e-99
Seed eggNOG ortholog2880.D8LG69
KEGG rclassRC00010
KEGG koko:K02433
KEGG ReactionR03905,R04212
KEGG Pathwayko00970,ko01100,map00970,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln)
EggNOG OGsCOG0154@1,KOG1211@2759
EC6.3.5.6,6.3.5.7
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029
Exons5
Model size1202
Cds size1101
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig920.17007.1prot_H-paniculata_contig920.17007.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig920 26447..30085 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931146.1211317-UTR-H-paniculata_contig920:26345..264461622931146.1211317-UTR-H-paniculata_contig920:26345..26446Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig920 26346..26446 +
1691481611.5547082-UTR-H-paniculata_contig920:26345..264461691481611.5547082-UTR-H-paniculata_contig920:26345..26446Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig920 26346..26446 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931146.1376848-CDS-H-paniculata_contig920:26446..266621622931146.1376848-CDS-H-paniculata_contig920:26446..26662Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig920 26447..26662 +
1691481611.5687785-CDS-H-paniculata_contig920:26446..266621691481611.5687785-CDS-H-paniculata_contig920:26446..26662Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig920 26447..26662 +
1622931146.1583092-CDS-H-paniculata_contig920:27046..271881622931146.1583092-CDS-H-paniculata_contig920:27046..27188Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig920 27047..27188 +
1691481611.5781715-CDS-H-paniculata_contig920:27046..271881691481611.5781715-CDS-H-paniculata_contig920:27046..27188Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig920 27047..27188 +
1622931146.1780672-CDS-H-paniculata_contig920:27717..279861622931146.1780672-CDS-H-paniculata_contig920:27717..27986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig920 27718..27986 +
1691481611.5873075-CDS-H-paniculata_contig920:27717..279861691481611.5873075-CDS-H-paniculata_contig920:27717..27986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig920 27718..27986 +
1622931146.2051992-CDS-H-paniculata_contig920:28660..288491622931146.2051992-CDS-H-paniculata_contig920:28660..28849Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig920 28661..28849 +
1691481611.5965004-CDS-H-paniculata_contig920:28660..288491691481611.5965004-CDS-H-paniculata_contig920:28660..28849Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig920 28661..28849 +
1622931146.2237945-CDS-H-paniculata_contig920:29800..300851622931146.2237945-CDS-H-paniculata_contig920:29800..30085Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig920 29801..30085 +
1691481611.604615-CDS-H-paniculata_contig920:29800..300851691481611.604615-CDS-H-paniculata_contig920:29800..30085Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig920 29801..30085 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig920.17007.1

>prot_H-paniculata_contig920.17007.1 ID=prot_H-paniculata_contig920.17007.1|Name=mRNA_H-paniculata_contig920.17007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=367bp
MQVGAPTEFSIMRVVGRHARRTRPRQWLRGTPRMYPGRGCAALSCDSLTS
LFLSEVRMLRTKDTARKNGLKHTSDLRPSDLTEACIAQMGRSSWLNSFVE
RCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAI
LENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPW
SLGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGI
VGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDS
TCAPPGAGGWPIYGSGDGGGGGLARALVDASRGDGAAGILEGVTVGIPVE
FNVEGLRECFGSFCSG*
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mRNA from alignment at H-paniculata_contig920:26346..30085+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig920.17007.1 ID=mRNA_H-paniculata_contig920.17007.1|Name=mRNA_H-paniculata_contig920.17007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3740bp|location=Sequence derived from alignment at H-paniculata_contig920:26346..30085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGACTCCTTATTTGAGATCAAACTGCTGCTGCTTTAGATCAGGGTGTGG TGACTGGTTTGGACATTTACTCCACTTGCGGTCTATGACCTTGGTCGCTC AATGCAAGTCGGCGCTCCGACAGAATTTTCAATTATGAGAGTAGTGGGTC GGCATGCACGGCGAACCAGGCCGCGGCAGTGGCTGAGAGGTACTCCAAGG ATGTATCCCGGAAGGGGTTGCGCCGCGCTATCATGTGATAGTCTTACGAG TCTCTTCCTGTCAGAGGTAAGGATGTTGAGGACAAAGGACACAGCTAGAA AAAATGGTTTGAAGCATGCTGATTTCGTATGTATGCATTGATGTATCCCA AACTCAGCGTATTGGGCTCCTTACCCCCAACCCTCTTCGGAATGCAACGA GTATTGAGCTAGTCATGAAGGGTTTCTCTCCCGAAGCCCTGCTTGGGGTG CGACCTATTACGAAAATATGTAACCTACGTGTAAATGACGAGGAGAAACA TCAAGCTCGTTTCATGCATCAATGAATAAAAAGCTCTCCGTGTGTGCAAT CATATAGGTTGCCGATTCAATGCATTGGATCTCCATTAGATTGTCAAGTG CTCACGCAGGCCGAATTTACGGCGTAAGGTGCTCCTTCAGTTCGTTTCGT CAAACGAACACACATCACTGCACACGTAAATAGGCCTCTAGAAGGGTGCA GACCTCCGACCTGAGGCCTTCTGATCTGACTGAGGCCTGCATAGCACAGA TGGGGCGATCGAGCTGGCTCAACTCCTTCGTGGAACGTTGCCCAGACTCT GCCCGCTCGCAAGCCGAAGCTGCCGACCTAAGGCAGGCCAACGGTGAGTT AGCGGTCCTACTGTGACTTACAGGTAGACGTCTCGTCACCCACTTGTACC ATGGCTAATACCCTCAATTTTACGAGTGAACCAGCGTTATGGTTCGTGAA CTCACGGGAGGTAAAACACTAGGTAACTGTCTGAAATTCGGGTCGGGCCT CGGTTATTCAAATCCTTGATTAGGTCCCGCTCATCTCCAAACAAGCCCAC CCAAAAAATACGTATCATTCTCTGGTTCAGGTATGTGTAGGCAGGCCTAC ATGTAGCTTGGGTTCTTGTTAACCCCTCCCCCCCCGGATATTTTTTCTCA CATCAACAAGATGCAATGAACAATTCAATAAGTACGGCCAGCCTATTGTT ACTTTGTCGCAACATGAGTAGTATGGCTACCTGTAACACGAGGAACACTA CAGTACGGCGTGACGCACAGAACACCCAGCTTGCACAGCTGTTCGAATCG TCTCTCATGATTCCTGCCGACTAACCTCCCCTCCTCCCCATCCCCGACCG TCCATAACACCACGCGCCATAGGGACGTTGCTCGGTCCCTTAGACGGTAT CCCATACGCTGCAAAGGACAATTTGTGCACCCTAGGCGTTCCTACGACGG CGTCTTCTGCTATTCTCGAGAACTTTACTCCTTCGTACGACTCTACTGCT ACAAGACGGCTCAAGCGGGCGGGCACCCCGCTGCTGGGGAAGACGAACAT GGATGAATTTGGCATGGGATCTGGCACGCTATTCAGCGTTCATGGCCCCA CCCTTAACCCCTGGTCACTTGGCGATCCAAGCGAGGGACAGGCGAGTGGT GTCGTGACGCGATCCGCAGGCGTACCGACCTGTATATTGATAAGAGCATA GTTTGGTTGCCTGGGGTTATGGTGGTACACACACATATACTTTGGCAACC GTAGTGATTATACCGCACCGAGATCGAGCTGCCAGATATCCCATAGTTAG CCCACGGCACGATATTTCCTTTGTTCTCTCGACGACGTGTTGCTTGGTCT TACGGGCGTCTTGTGGTTTTTTTTTGTTATTTTCGCGAAATATGTCCTTG TCGCGGACTTACTGATTGTTGTGAGCGACCTGGCCCGCGTTTTGCCCGAA CCCTGTGCAAGCAGCTGGTTCATGTTTTCGCGTTGATTGTCTCCGAGCGT CACATTGTTTGTTCCGATAGTTTTTGTCGTTAGACCGGTTGCAGGGAGAA GGCTTTTTGCTGCCGTTGTCGGAACACCTCCCCCCGAAACCTCTGTCCAC CCCCCTCCCCCGCGTCCACCTTGGTCAGTGTGTAGATAATAACACAAGTA ATCTATCAGTTTGAAGATCCTGAGCACATCTCCATTTTTTTTACGGTTAC TGTCACGTTTTCTCCCTGCTTTTTATTTGCTCCTCCCCCCCCCCCGGAGA ACATTATTGACCCATCAAAATTTCCATCGTCCCCGCGCGTGCCCGTTTAC AACGCGATGGCACAGGCATTTATCCCCGGGGGTAGTTCAGGAGGGAGCGC AGCGGCCGTTTCATCAGGGTCTTGTTTTTTCGCGCTGGGTTCCGACACGG GCGGCTCTGTCCGGATGCCGGGGGCGTTTTGTGGTATCGTAGGGTTCAAG CCCACTTACGGATTGATTCCGCGCCACGGACTAATCGCCTACGCGAGTTC TCTGGTAAGAAATAGAAGAAGCAGCGCGGCGGTAAAGAAGGCGTATAGGG ATTGGTGGCCTAGTGGGTGGTTTCGCTGGATGTTGCTCGGCACTCTGCCC GGCAGGCAGCGCTTGGTATGTGGGGTGCTTGCAGTGTTATGCAGCGTCAT TTTCTGTCTGCCAGCTACCTCCGAGTTTTGTTGTCCCTGGGGTGTGTGGG CCCGTGAGTGGAGTGTTGATACACGCTTCGACAAGAAATCTTGTGCCGCC AAATATATATATATATATACATAAACGAAGTTGGCTGACAACACTGCACG AGCCAGAGGTTAACTCTTGTCGCGTTTTATTTTACGATTTTATTCAATAT GCTCCGTTTGGTGGTTGCCTCAGGATGTGCGATACACAGGTATCATCATT CAGTCTATGTGTGTAGAACGAACGGAAGACTGCTTCATACTGTACGATAT TTGCCACGGCGAGGGGAAAAGGGAGGGGGGGGGGGGGGCAGGTGCTAGAG TGATTGAGCACATGCACCACCTGCCGCACACTAGTCGACCCCTGAAAAAA ACAGTGAAGGCGTATCACTCACTTTACGTCTTGAAGCAAAACAGACGGAT TTCTAGTTCATCCCCCCCCACATAGATCTATACCGAACCTTCCTCACGTC CGACAGATCAAATTGTACAATTGTGAATTTTGGGCGTTTTGCATCCATCG CAGAGAACAGCTCCTCGTCGCTGTAAAACCCCGTGGCGAACACTGCACAG GGTTCCTGGTAGACCGAACAGAGCAGCCAGAAAGCTTCCTCGTGCCGTAA GATCAATACAATAGCACGGACTGTTCTAGAATGTGTTCTAGAACACTACA CTAATACTAGTATATTCAGTTTTCTGTTCTTTTCTGTCGGACGTATAGAG CCTTTACGCACCCTTCAAGAAAACTGCCCCCCCCCTCCCCCCTGGGCCCA TGCAGGACACAATCGGAATTATGACTCGCTCGGTATTGGACAGCGCAATG GTACTCGATGTTATCGCCGGGGCAGACTCGAGGGACTCCACATGCGCGCC CCCCGGCGCGGGAGGATGGCCAATTTACGGCAGCGGCGATGGCGGCGGCG GGGGGTTGGCGAGAGCGTTAGTTGACGCAAGCCGGGGAGATGGGGCGGCA GGGATTCTAGAAGGGGTGACAGTGGGCATACCGGTGGAGTTCAATGTGGA GGGGCTACGTGAGTGCTTTGGTTCATTTTGTTCGGGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig920:26346..30085+

>mRNA_H-paniculata_contig920.17007.1 ID=mRNA_H-paniculata_contig920.17007.1|Name=mRNA_H-paniculata_contig920.17007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2202bp|location=Sequence derived from alignment at H-paniculata_contig920:26346..30085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAAGTCGGCGCTCCGACAGAATTTTCAATTATGAGAGTAGTGGGTCG
GCATGCACGGCGAACCAGGCCGCGGCAGTGGCTGAGAGGTACTCCAAGGA
TGTATCCCGGAAGGGGTTGCGCCGCGCTATCATGTGATAGTCTTACGAGT
CTCTTCCTGTCAGAGGTAAGGATGTTGAGGACAAAGGACACAGCTAGAAA
AAATGGTTTGAAGCATATGCAAGTCGGCGCTCCGACAGAATTTTCAATTA
TGAGAGTAGTGGGTCGGCATGCACGGCGAACCAGGCCGCGGCAGTGGCTG
AGAGGTACTCCAAGGATGTATCCCGGAAGGGGTTGCGCCGCGCTATCATG
TGATAGTCTTACGAGTCTCTTCCTGTCAGAGGTAAGGATGTTGAGGACAA
AGGACACAGCTAGAAAAAATGGTTTGAAGCATACCTCCGACCTGAGGCCT
TCTGATCTGACTGAGGCCTGCATAGCACAGATGGGGCGATCGAGCTGGCT
CAACTCCTTCGTGGAACGTTGCCCAGACTCTGCCCGCTCGCAAGCCGAAG
CTGCCGACCTAAGGCAGGCCAACGACCTCCGACCTGAGGCCTTCTGATCT
GACTGAGGCCTGCATAGCACAGATGGGGCGATCGAGCTGGCTCAACTCCT
TCGTGGAACGTTGCCCAGACTCTGCCCGCTCGCAAGCCGAAGCTGCCGAC
CTAAGGCAGGCCAACGGGACGTTGCTCGGTCCCTTAGACGGTATCCCATA
CGCTGCAAAGGACAATTTGTGCACCCTAGGCGTTCCTACGACGGCGTCTT
CTGCTATTCTCGAGAACTTTACTCCTTCGTACGACTCTACTGCTACAAGA
CGGCTCAAGCGGGCGGGCACCCCGCTGCTGGGGAAGACGAACATGGATGA
ATTTGGCATGGGATCTGGCACGCTATTCAGCGTTCATGGCCCCACCCTTA
ACCCCTGGTCACTTGGCGATCCAAGCGAGGGACAGGGACGTTGCTCGGTC
CCTTAGACGGTATCCCATACGCTGCAAAGGACAATTTGTGCACCCTAGGC
GTTCCTACGACGGCGTCTTCTGCTATTCTCGAGAACTTTACTCCTTCGTA
CGACTCTACTGCTACAAGACGGCTCAAGCGGGCGGGCACCCCGCTGCTGG
GGAAGACGAACATGGATGAATTTGGCATGGGATCTGGCACGCTATTCAGC
GTTCATGGCCCCACCCTTAACCCCTGGTCACTTGGCGATCCAAGCGAGGG
ACAGGCATTTATCCCCGGGGGTAGTTCAGGAGGGAGCGCAGCGGCCGTTT
CATCAGGGTCTTGTTTTTTCGCGCTGGGTTCCGACACGGGCGGCTCTGTC
CGGATGCCGGGGGCGTTTTGTGGTATCGTAGGGTTCAAGCCCACTTACGG
ATTGATTCCGCGCCACGGACTAATCGCCTACGCGAGTTCTCTGGCATTTA
TCCCCGGGGGTAGTTCAGGAGGGAGCGCAGCGGCCGTTTCATCAGGGTCT
TGTTTTTTCGCGCTGGGTTCCGACACGGGCGGCTCTGTCCGGATGCCGGG
GGCGTTTTGTGGTATCGTAGGGTTCAAGCCCACTTACGGATTGATTCCGC
GCCACGGACTAATCGCCTACGCGAGTTCTCTGGACACAATCGGAATTATG
ACTCGCTCGGTATTGGACAGCGCAATGGTACTCGATGTTATCGCCGGGGC
AGACTCGAGGGACTCCACATGCGCGCCCCCCGGCGCGGGAGGATGGCCAA
TTTACGGCAGCGGCGATGGCGGCGGCGGGGGGTTGGCGAGAGCGTTAGTT
GACGCAAGCCGGGGAGATGGGGCGGCAGGGATTCTAGAAGGGGTGACAGT
GGGCATACCGGTGGAGTTCAATGTGGAGGGGCTACGTGAGTGCTTTGGTT
CATTTTGTTCGGGGTGAGACACAATCGGAATTATGACTCGCTCGGTATTG
GACAGCGCAATGGTACTCGATGTTATCGCCGGGGCAGACTCGAGGGACTC
CACATGCGCGCCCCCCGGCGCGGGAGGATGGCCAATTTACGGCAGCGGCG
ATGGCGGCGGCGGGGGGTTGGCGAGAGCGTTAGTTGACGCAAGCCGGGGA
GATGGGGCGGCAGGGATTCTAGAAGGGGTGACAGTGGGCATACCGGTGGA
GTTCAATGTGGAGGGGCTACGTGAGTGCTTTGGTTCATTTTGTTCGGGGT
GA
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