mRNA_H-paniculata_contig920.17007.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: D8LG69_ECTSI (Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG69_ECTSI) HSP 1 Score: 364 bits (935), Expect = 7.400e-120 Identity = 203/296 (68.58%), Postives = 225/296 (76.01%), Query Frame = 3
Query: 324 DLRPSDLTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWSLGDP-----SEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAPPGAGGWPIYGSGDGGGGGLARALVDASR-GDGAAGILEGVTVGIPVEFNVE----GLRECF 1181
D+RPS+L EACI QM RSSWLN FV RC DSAR +AEAAD RQANGTL GPLDGIPYAAKDN CTLGV TTASSA L FTP YDST T RL++ G+ L+GKTNMDEFGMGSGTLFS +G TLNPWS P +E +PGGSSGGSAAAVSSG F ALGSDTGGSVR P AFCG+VG KPTYGLIPRHGLIAYASSLDT G++ RS+LD+AMVLDV+AG DSRDSTC P G G GGGG A L+ A+ G ++ LEGVTVGIP EFNVE G+RE +
Sbjct: 42 DVRPSELAEACIKQMERSSWLNCFVTRCFDSARLEAEAADARQANGTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQVGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSPESPGDEKNTEAPFLVPGGSSGGSAAAVSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSILDAAMVLDVVAGPDSRDSTCIPAG--------KGRAGGGGFASDLLGAAAAGSSSSWPLEGVTVGIPKEFNVEELDAGVREAW 329
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A6H5KIR5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR5_9PHAE) HSP 1 Score: 360 bits (924), Expect = 1.740e-116 Identity = 201/296 (67.91%), Postives = 225/296 (76.01%), Query Frame = 3
Query: 324 DLRPSDLTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWSLGDP-----SEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAPPGAGGWPIYGSGDGGGGGLARALVDASR-GDGAAGILEGVTVGIPVEFNVE----GLRECF 1181
D+RPS+L EACI Q+ RSSWLN FV RC +SAR +A AAD RQANGTL GPLDGIPYAAKDN CTLGV TTASSA L FTP YDST T RL++AG+ L+GKTNMDEFGMGSGTLFS +G TLNPWS P +E F+PGGSSGGSAAAVSSG F ALGSDTGGSVR P AFCG+VG KPTYGLIPRHGLIAYASSLDT G++ RSVLD+AMVLDV+AG D +DSTC P G G GGGG A L+ A+ G ++ LEGVTVGIP EFNVE G+RE +
Sbjct: 21 DVRPSELAEACIKQIERSSWLNCFVTRCFNSARLEAGAADARQANGTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSRESPGDEENTEAPFFVPGGSSGGSAAAVSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSVLDAAMVLDVVAGPDPKDSTCIPAG--------KGHAGGGGFASDLLKAAAAGSSSSWPLEGVTVGIPKEFNVEELDVGVREAW 308
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A6A5AUD5_9STRA (Amidase domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AUD5_9STRA) HSP 1 Score: 236 bits (603), Expect = 1.260e-71 Identity = 132/227 (58.15%), Postives = 157/227 (69.16%), Query Frame = 3
Query: 342 LTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTL-GVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWS--LGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAP 1013
LT+ACI Q+ + N FV DSA ++A +D R+ +G GPLDGIP KD C GVPTTASS IL+ F Y+STAT+RL AG LGK NMDEF MGSGT +S GPT+NPWS LGD +A + GGSSG SAAAV+SG CF ALGSDTGGSVR P A+CG+ G KP YG I RHG+IA+ASSLDT GI+ ++V D+A+VL IAG D DST P
Sbjct: 43 LTQACIDQIEATKRFNMFVATTFDSALARASESDARRRDGRARGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSDLGD----RALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTVRDAAIVLHAIAGPDGHDSTALP 265
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A7C3YR34_9FIRM (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C3YR34_9FIRM) HSP 1 Score: 232 bits (592), Expect = 2.100e-70 Identity = 127/250 (50.80%), Postives = 163/250 (65.20%), Query Frame = 3
Query: 267 VRMLRTKDTARKNGLKHTSDLRPSDLTEACIAQMGR-SSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWSLGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAP 1013
V++L K+ A + L ++ ++T + + ++ R + +FV + A + A AD R A G GPL GIP A KDN+CT G+PTT SS ILENF P YD+ RL AG ++GKTN+DEF MGS T S T NPW+ +PGGSSGGSAAAV++G FALGSDTGGS+R P +FCG+VG KPTYGL+ R+GL+A+ASSLD IG +TR+V D A+VL IAG D RDSTCAP
Sbjct: 2 VKLLYQKNIAELHELLVRREVSAEEVTRSVLDRVDRVEGKIKAFVTVTREQALASAREADRRLAAGDAAGPLTGIPMALKDNMCTKGIPTTCSSRILENFVPPYDAAVVERLAGAGAVMVGKTNLDEFAMGSSTENSAFFTTSNPWN-------PEMVPGGSSGGSAAAVAAGEAIFALGSDTGGSIRQPASFCGVVGMKPTYGLVSRYGLVAFASSLDQIGPLTRTVTDCALVLQAIAGPDHRDSTCAP 244
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A1V9YGS0_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGS0_9STRA) HSP 1 Score: 237 bits (605), Expect = 1.110e-69 Identity = 146/282 (51.77%), Postives = 172/282 (60.99%), Query Frame = 3
Query: 342 LTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCT-LGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWS--LGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAPPGAG-GWPIYGSGDGGGGGLARALVDASRGDGAAGILEGVTVGIPVEFNVEGLRE 1175
LTEACI Q+ + LN FV D AR+ A A+D R+A GT GPLDGIP A KD C VPTT S IL+ F Y+STAT+RL AG LGK NMDEFGMGS T +S G T+NPWS LGD A + GGSSG SAAA++SG CF ALGSDTGGSVR P A+CG+ G KP YG I RHG+IAYASSLDT + T++ D+A+VL ++AG D +DST G W D S L GVTVG+P E+ VE L E
Sbjct: 33 LTEACIRQIEATRGLNMFVAETIDDARAAAVASDARRAAGTAKGPLDGIPIAVKDIFCMDNSVPTTCGSKILQGFRAPYESTATQRLLDAGAVPLGKLNMDEFGMGSATKYSTFGATINPWSKNLGD----DALVAGGSSGASAAAIASGCCFAALGSDTGGSVRQPAAYCGVTGIKPNYGRISRHGMIAYASSLDTPALFTKTARDAALVLPLLAGPDGKDSTAIQDGVPHDW---------------LPTDVSH-------LRGVTVGVPNEYFVEELPE 288
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A7H1N053_9PROT (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Defluviicoccus vanus TaxID=111831 RepID=A0A7H1N053_9PROT) HSP 1 Score: 236 bits (602), Expect = 1.410e-69 Identity = 135/277 (48.74%), Postives = 174/277 (62.82%), Query Frame = 3
Query: 339 DLTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWSLGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAPPGAGGWPIYGSGDGGGGGLARALVDASRGDGAAGILEGVTVGIPVEFNVEGL 1169
+LT ACI M LN+F+ PD A +A AAD R+A+G G LDGIP A KD CT GV TTA+S IL+ F P Y+ST + L+ AG +LGKTN+DEF MGS + S +GP NPW P +G+ +PGGSSGGSAAAV++ +CF A G+DTGGS+R P +FCGIVG KPTYG R G++A+ASSLD G MTR+V D+A++L +AG D +DST AP P Y A GD + G+ VG+P E+ V+G+
Sbjct: 26 ELTRACIEVMAARRDLNAFITETPDLALERAAAADARRASGESAGSLDGIPIAIKDLFCTEGVLTTAASHILDGFVPPYESTVSANLRNAGAVMLGKTNLDEFAMGSANITSYYGPVKNPWG---PRDGKDLVPGGSSGGSAAAVAAHACFAATGTDTGGSIRQPASFCGIVGLKPTYGRCSRWGIVAFASSLDQAGPMTRNVRDAAIMLGSMAGHDPKDSTSAPRPV---PNY--------------EQALSGD-----IRGLRVGVPKEYRVDGM 277
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: W4H4Y8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4Y8_9STRA) HSP 1 Score: 236 bits (603), Expect = 3.130e-69 Identity = 131/227 (57.71%), Postives = 157/227 (69.16%), Query Frame = 3
Query: 342 LTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTL-GVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWS--LGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAP 1013
LT+ACI Q+ + N FV DSA ++A +D R+ +G GPLDGIP KD C GVPTTASS IL+ F Y+STAT+RL AG LGK NMDEF MGSGT +S GPT+NPWS LGD +A + GGSSG SAAAV+SG CF ALGSDTGGSVR P A+CG+ G KP YG I RHG+IA+ASSLDT GI+ +++ D+A+VL IAG D DST P
Sbjct: 43 LTQACIDQIEATKRFNMFVATTFDSALARASESDARRRDGRACGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSDLGD----RALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTIRDAAIVLHAIAGPDGHDSTALP 265
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: W7TVN2_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVN2_9STRA) HSP 1 Score: 238 bits (607), Expect = 3.890e-69 Identity = 141/281 (50.18%), Postives = 174/281 (61.92%), Query Frame = 3
Query: 333 PSDLTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWS-LGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAPPGAGGWPIYGSGDGGGGGLARALVDASRGDGAAGILEGVTVGIPVEFNVEGLR 1172
P + + C+++ +S LNSFV +A +A A + + GPL GIP A KDN CT GV TTASS +L NF P Y +TA RL+ +G ++GKTNMDEFGMGS TLFS G T+NPWS + + GGSSGGSA AV++GS ALGSDTGGSVR P AFCG+VG KPTYG + RHGLIAYASSLD G++TR+V D+A+VLDV+AG D DSTC P D +SR G A L G+ VGIP EF ++ L
Sbjct: 93 PFSVMQRCLSRQQETSGLNSFVTVLRHAAEKEAAVAG---RHSVMKGPLHGIPIAVKDNFCTAGVRTTASSRMLANFVPPYSATAVSRLEASGAIVVGKTNMDEFGMGSATLFSHFGKTINPWSQAAEKGDKPRLAAGGSSGGSAVAVATGSALAALGSDTGGSVRQPAAFCGLVGLKPTYGRVSRHGLIAYASSLDCPGVLTRTVADAALVLDVVAGRDPLDSTCLEQ-----PHRPCFD-----RTMEAAASSRAAGLAVSLRGLKVGIPAEFAIQELE 360
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: A0A024UMY2_9STRA (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit, variant 3 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMY2_9STRA) HSP 1 Score: 230 bits (587), Expect = 3.570e-68 Identity = 128/227 (56.39%), Postives = 154/227 (67.84%), Query Frame = 3
Query: 342 LTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLG-VPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWS--LGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTCAP 1013
LT+AC+ Q+ + N FV D+A A AD R+ +G GPLDGIP KD C VPTTA S IL+ F Y+STAT+RL AG LGK NMDEF MGSGT +S GPT+NPWS LG+ QA + GGSSG SAAAV+SG CF ALGSDTGGSVR P A+CG+ G KP YG I RHG+IA+ASSLDT GI+T+++ D+++VL IAG D DST P
Sbjct: 44 LTQACMDQIEATRGFNMFVATTFDAALEHAAEADKRRRDGRARGPLDGIPVGVKDIFCMRNAVPTTACSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSKNLGE----QALVAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILTKTIRDASIVLQAIAGPDGHDSTALP 266
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Match: UPI0012D42F02 (glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D42F02) HSP 1 Score: 231 bits (590), Expect = 1.150e-67 Identity = 120/230 (52.17%), Postives = 151/230 (65.65%), Query Frame = 3
Query: 318 TSDLRPSDLTEACIAQMGRSSWLNSFVERCPDSARSQAEAADLRQANGTLLGPLDGIPYAAKDNLCTLGVPTTASSAILENFTPSYDSTATRRLKRAGTPLLGKTNMDEFGMGSGTLFSVHGPTLNPWSLGDPSEGQAFIPGGSSGGSAAAVSSGSCFFALGSDTGGSVRMPGAFCGIVGFKPTYGLIPRHGLIAYASSLDTIGIMTRSVLDSAMVLDVIAGADSRDSTC 1007
T + P D+T+ C+ R LN F+ RC + A QA+ + R G +G LDGIP A KDN C G+PTT +S +LENF PSY++T RL AG +GKTN+DEF MGSG + S+ GPT N W D I GGSSGGSA AV+SGSCF ALGSDTGGSVR P ++CG++G KPTYGL+ RHGLI +S+D I+TR+V D +L+ IAG DS D+TC
Sbjct: 18 TKSVDPKDVTKLCLDLSHRYKHLNYFISRCDEQAAEQAQQSSERWQKGKPMGELDGIPIAVKDNFCVKGLPTTCASRMLENFVPSYNATPFNRLNDAGAVFMGKTNLDEFSMGSGAVDSIFGPTKNVWRSDD-----GHIAGGSSGGSAVAVASGSCFAALGSDTGGSVRNPASYCGLIGLKPTYGLVSRHGLIPLVNSMDVPAILTRTVDDCVAILNTIAGPDSNDATC 242 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig920.17007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig920.17007.1 >prot_H-paniculata_contig920.17007.1 ID=prot_H-paniculata_contig920.17007.1|Name=mRNA_H-paniculata_contig920.17007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=367bp MQVGAPTEFSIMRVVGRHARRTRPRQWLRGTPRMYPGRGCAALSCDSLTSback to top mRNA from alignment at H-paniculata_contig920:26346..30085+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig920.17007.1 ID=mRNA_H-paniculata_contig920.17007.1|Name=mRNA_H-paniculata_contig920.17007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3740bp|location=Sequence derived from alignment at H-paniculata_contig920:26346..30085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig920:26346..30085+ >mRNA_H-paniculata_contig920.17007.1 ID=mRNA_H-paniculata_contig920.17007.1|Name=mRNA_H-paniculata_contig920.17007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2202bp|location=Sequence derived from alignment at H-paniculata_contig920:26346..30085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |