mRNA_H-paniculata_contig9199.17001.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9199.17001.1
Unique NamemRNA_H-paniculata_contig9199.17001.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Match: D8LBQ0_ECTSI (Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ0_ECTSI)

HSP 1 Score: 389 bits (1000), Expect = 6.240e-128
Identity = 205/305 (67.21%), Postives = 232/305 (76.07%), Query Frame = 1 
Query:   55 YDDFETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAND-DSRVVVISGRGDHFSAGLDLADNSNFEQIGKVTTDVARRALRFRKLAMAMQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSRSLG--------------------------------------ENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAATWNGAALQAEDLETAMRAA 852
            YD FET+ VS PA YVLHV+INRPSKRNAMN +FW E R+ F+ I+ D D R VV+SG GDHFSAGLDL+D +NF+ IG+ T DVARRA RFRKLA+AMQ SF+AVERCPQPV+AAIHGACVGGAVDL CACDIRLCSEDA FCVAEVKVGLAADVGTLQRMP+IVGNESLCRELAYTGRTFG+AEA+RMG VSR +                                         S++ EVV A++L A++I R SPVAVFGTKRNL+Y+RDHSV DGLEYAATW+GAALQA DL TAMRAA
Sbjct:    2 YDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDIRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAA 306
[Close]
BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Match: A0A6P8I096_ACTTE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I096_ACTTE)

HSP 1 Score: 291 bits (746), Expect = 4.350e-90
Identity = 156/279 (55.91%), Postives = 196/279 (70.25%), Query Frame = 1 
Query:   64 FETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAND-DSRVVVISGRGDHFSAGLDLADNSN-FEQIGKVTTDVARRALRFRKLAMAMQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSRSLGENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAATWNGAALQAEDLETAMRAALAKKGTAAPKFSKL 894
            +ET+ VS+PA +VL VE+NRP KRNAMN  FW E  E F +I ND D R VV++G G  F+AGLDL D +  F Q G    D AR+A   RK+ ++ Q SFS +E+CP+PV+AAIH AC+GG VDLVCACDIRLCS DA F + EV +GLAADVGTLQR+P+IVGN+SL REL+YT R   + EA   GLVS    +   ++ ++ AA  +A+ I   SPVAV GTK NL YSRDHSVE+GL Y ATWN + LQ ED+  A++A +AK+    P FSKL
Sbjct:   50 YETLAVSQPADHVLRVELNRPEKRNAMNQAFWREMVECFNKITNDSDCRXVVVTGAGKIFTAGLDLMDMAGVFMQAGPENADAARKAAELRKIILSYQESFSVIEKCPKPVIAAIHSACIGGGVDLVCACDIRLCSSDAWFQIKEVDIGLAADVGTLQRLPKIVGNDSLVRELSYTARRLPANEAKEAGLVSHIYPD---KESLISAATAMASKIASKSPVAVMGTKHNLNYSRDHSVEEGLNYMATWNMSMLQTEDIMKAVQAEMAKE---KPTFSKL 322
[Close]
BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Match: A0A7D9IU21_PARCT (Delta(3,5)-Delta(2,4)-dienoyl- isomerase, mitochondrial n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IU21_PARCT)

HSP 1 Score: 273 bits (699), Expect = 3.050e-83
Identity = 148/278 (53.24%), Postives = 191/278 (68.71%), Query Frame = 1 
Query:   64 FETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAND-DSRVVVISGRGDHFSAGLDLADNSNFEQIGKVTTDVARRALRFRKLAMAMQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSRSLGENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAATWNGAALQAEDLETAMRAALAKKGTAAPKFSKL 894
            FET+ V+KP  +V  V INRP KRNAMN  FW E    F +IA D + R VV+SG G  F+AGLDL D ++     +   DV+RRA   RK  +  Q SFS +E+CPQPV+AAIH ACVGG VD++CACDIR C+ DA F V EV++GLAADVGTLQR+P+IVGNESL REL YT R   S EA   GLVSR   +   ++ ++++A+ +A+ I + SPVAV GTK NL YSRDH V++ LEY A+WN + LQ +D+  A++A + K+    P FSKL
Sbjct:   42 FETLEVTKPRDHVFQVNINRPEKRNAMNQTFWSEMVTCFNKIATDTECRAVVLSGAGKIFTAGLDLMDMASVIMSQQDDQDVSRRAYNMRKTILQFQESFSVIEKCPQPVIAAIHSACVGGGVDMICACDIRWCTSDAWFQVKEVELGLAADVGTLQRLPKIVGNESLVRELCYTSRKLMSEEAKSFGLVSRIFQD---RESLIDSALDLASHIAKMSPVAVSGTKHNLNYSRDHPVDESLEYIASWNMSMLQTDDILKAVQAGMNKE---EPTFSKL 313
[Close]
BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Match: A0A3S1BDV2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1BDV2_ELYCH)

HSP 1 Score: 273 bits (697), Expect = 7.080e-83
Identity = 147/279 (52.69%), Postives = 192/279 (68.82%), Query Frame = 1 
Query:   61 DFETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAND-DSRVVVISGRGDHFSAGLDLADNSNFEQIGKVTTDVARRALRFRKLAMAMQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSRSLGENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAATWNGAALQAEDLETAMRAALAKKGTAAPKFSKL 894
            +F+T+ V  PA +V HVE+NRP + NAMN  FW E  E F+++A D D RVV++SG G  F++GLDLADN  F QI     D +R+A +  K     Q SFSA+E+CP+PV+AA+H AC+GG +D++ ACDIR C++DA F + EV VGLAADVGTLQR PRIVGN+SL REL YT R F S EA  +G VSR L +     ++++ A+ +A+ I   SPVAV G+K NL+YSRDHSV +GL+Y A WN   LQ+ED+   M+AA A      P FSKL
Sbjct:   47 EFKTLKVHSPAEFVKHVELNRPERLNAMNMDFWREMVECFDKLAEDEDCRVVILSGSGKAFTSGLDLADNGLF-QIIMADEDCSRKAFKMNKAIPKFQESFSAIEKCPKPVIAAVHSACIGGGIDMISACDIRFCTQDAWFQIKEVDVGLAADVGTLQRFPRIVGNDSLTRELVYTARKFYSDEAKSIGFVSRVLVDKD---QMMKTALDMASTIAAKSPVAVQGSKINLVYSRDHSVPEGLDYNAKWNITMLQSEDV---MKAASAFMNKTKPVFSKL 318
[Close]
BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Match: UPI001F04F430 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04F430)

HSP 1 Score: 271 bits (693), Expect = 2.010e-82
Identity = 146/279 (52.33%), Postives = 195/279 (69.89%), Query Frame = 1 
Query:   61 DFETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAND-DSRVVVISGRGDHFSAGLDLADNSNFEQIGKVTTDVARRALRFRKLAMAMQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSRSLGENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAATWNGAALQAEDLETAMRAALAKKGTAAPKFSKL 894
            DFET+ +++P  +V  V INRP KRNAMN  FW E    FE+IAN+ D RVVV+S  G  F+AGLDL D S+   + +   DV+R+A   RK  +  Q SFS +ERCPQPV+AAIH ACVGG VD++C+CDIR C+ DA F + EV++GLAADVGTLQR+P+IVGNESL REL +T R F + EA   GLVSR   +   ++ ++  A+ +A+ I + SP+A+ GTK+NL YSRDH V++ LEY ATWN + LQ ED+  A++A + K+  +   FSKL
Sbjct:   37 DFETLELTQPRNHVYQVNINRPEKRNAMNQTFWKEMVTCFEKIANESDCRVVVLSAAGKIFTAGLDLMDFSSIV-LQQDDKDVSRKAYNMRKTIVQCQESFSVIERCPQPVIAAIHSACVGGGVDMICSCDIRWCTSDAWFQIKEVELGLAADVGTLQRLPKIVGNESLVRELCFTARKFMAEEAKSFGLVSRIFQD---KESLLNGALDLASHIAKMSPIAITGTKKNLNYSRDHGVDESLEYMATWNMSMLQTEDILKAVQAGMNKEEAS---FSKL 308
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BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Match: A0A835YKC1_9STRA (Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC1_9STRA)

HSP 1 Score: 270 bits (691), Expect = 2.700e-82
Identity = 147/280 (52.50%), Postives = 191/280 (68.21%), Query Frame = 1 
Query:   55 YDDFETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAND-DSRVVVISGRGDHFSAGLDLADNSN-----FEQIGKVTTDVARRALRFRKLAMAMQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSRSLGENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAATWNGAALQAEDLETAMRAALAKKGTAA 876
            Y  FET+ V     +VLHVE+NRP++ NAMN ++W E R +F  IA D + R VVISG G HFSAG+D+              GK  +DVAR AL+ ++L ++MQ SF+ + RCPQPV+AAIHGAC+GGAVDL+ ACD+R CS+ A F V EV VGL ADVGTLQR+PR+VGN+S  R++ Y+ RTFG+AEA   GLVS+    +  ++ ++ AAM  AA I  HSP+AV GTKR+L +S+DHSV DGL + A WN AAL  +DL    R    +KG AA
Sbjct:    5 YVGFETLAVRVAVPHVLHVELNRPNRANAMNAQYWHEMRRLFAAIAVDPEVRAVVISGAGKHFSAGIDMQPGQQPTGNLLSGPGK-NSDVARHALKLQQLVLSMQESFTCITRCPQPVIAAIHGACMGGAVDLITACDMRFCSDCALFSVKEVAVGLCADVGTLQRLPRVVGNQSWVRDICYSARTFGAAEAKEFGLVSKVC--SGGREGILAAAMEAAAVIAAHSPLAVTGTKRSLEWSQDHSVADGLAHVALWNSAALMTKDLMIGARPPDRRKGGAA 281
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BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Match: A0A2B4RA31_STYPI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RA31_STYPI)

HSP 1 Score: 270 bits (690), Expect = 8.720e-82
Identity = 145/279 (51.97%), Postives = 193/279 (69.18%), Query Frame = 1 
Query:   64 FETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAND-DSRVVVISGRGDHFSAGLDLADNSNFEQIGKVTTDVARRALRFRKLAMAMQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSR-SLGENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAATWNGAALQAEDLETAMRAALAKKGTAAPKFSKL 894
            FET+ V+KP  +V+ VE+NRP KRNAMN  FW E  + F +IA+D D R VV++G G  F+AGLDL D  +   +     + +RRA   RKL + +Q SF  +E+CPQPV+AA H ACVGG VD++C+CDIRLCS DA F + E+ +GLAAD+GTLQ+ P+I+GN+SL REL +TGR F + EA + G VSR S G +S  KE +E    +A  I + SPVA+ GTK NL +SRDHS ++GLEY ATWN A LQ ED+  A+++ + K+    P FSKL
Sbjct:   53 FETLAVTKPLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDLMDMGS--NLMSSDLEPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKEIDIGLAADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSRVSPGRDSLVKEALE----LAGQIAKKSPVAMAGTKHNLNFSRDHSAQEGLEYMATWNMAMLQTEDILKAVQSGMNKE---EPVFSKL 322
[Close]
BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Match: A0A401NMA4_SCYTO (Uncharacterized protein n=3 Tax=Galeoidea TaxID=119195 RepID=A0A401NMA4_SCYTO)

HSP 1 Score: 268 bits (686), Expect = 1.070e-81
Identity = 144/279 (51.61%), Postives = 187/279 (67.03%), Query Frame = 1 
Query:   61 DFETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAND-DSRVVVISGRGDHFSAGLDLADNSNFEQIGKVTTDVARRALRFRKLAMAMQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSRSLGENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAATWNGAALQAEDLETAMRAALAKKGTAAPKFSKL 894
            DFET+ VS+    VLHVE+NRP KRNAMN   W E  E F+RIA D D RVVV+SG G  F+AG+DL D +  E +     D AR+A   R   +  Q SF+ +E+C +PV+AA+HGAC+GG +DL+ ACDIRLCS DA F V EV +G+AADVGTLQR+P+++GN SL  EL YT R   + EA   GLVSR   +   ++ +++ A  +A++I   SPV V G K NLIYSRDHSV+DGL Y ATWN + LQ +DL  + +AA+ KK      +SKL
Sbjct:   12 DFETLRVSQARDSVLHVELNRPKKRNAMNKTLWREMVECFQRIAQDTDQRVVVVSGAGKMFTAGIDLLDMAG-EVLQPQGDDTARKAWHMRNTILQYQESFNVIEKCSKPVIAAVHGACIGGGIDLITACDIRLCSRDAWFQVKEVDIGMAADVGTLQRLPKVIGNASLVSELVYTARMMMADEALSCGLVSRLFED---KEAMLDGAFEMASEIASKSPVGVQGAKMNLIYSRDHSVKDGLNYIATWNMSMLQTDDLVKSAQAAMEKKSPKDVPYSKL 286
[Close]
BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Match: A0A1S3K0E9_LINUN (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K0E9_LINUN)

HSP 1 Score: 269 bits (688), Expect = 1.140e-81
Identity = 144/278 (51.80%), Postives = 196/278 (70.50%), Query Frame = 1 
Query:   64 FETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAND-DSRVVVISGRGDHFSAGLDLADNSNFEQIGKVTTDVARRALRFRKLAMAMQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSRSLGENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAATWNGAALQAEDLETAMRAALAKKGTAAPKFSKL 894
            FET+ V+KP  YVL VE+NRP KRNAMN  FW E  E F +++ D D R VV+SG G  F+AG+DL + ++   +  + +DV R++++ +      Q +F+ +E+CP+PV+ A+H ACVGG +DL+ ACDIR CS+DA F V EV VGLAADVGTLQR+P++VGN+SL RELAYT R   + EA R GLVSR L +   ++  +EAA+  AA I   SP+AV G+K +++YSRDHSV++GLE+ A WN A LQ+ED+ TA  AA+ KK     +FSKL
Sbjct:   41 FETLKVTKPREYVLQVELNRPEKRNAMNAAFWREMVECFNKVSTDPDCRSVVVSGAGKLFTAGIDLQEIAS---LMPMESDVGRKSMKLKGAIARYQDTFTCMEKCPKPVIVAVHNACVGGGIDLITACDIRYCSQDAWFQVKEVDVGLAADVGTLQRLPKVVGNDSLARELAYTARKMMADEAMRCGLVSRILPD---RESTIEAAIETAALIASKSPIAVQGSKVSIVYSRDHSVQEGLEHIACWNSAMLQSEDVMTAAMAAVEKKPA---EFSKL 309
[Close]
BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Match: UPI0018F54D84 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X1 n=2 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F54D84)

HSP 1 Score: 269 bits (688), Expect = 1.140e-81
Identity = 145/279 (51.97%), Postives = 187/279 (67.03%), Query Frame = 1 
Query:   61 DFETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAND-DSRVVVISGRGDHFSAGLDLADNSNFEQIGKVTTDVARRALRFRKLAMAMQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSRSLGENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAATWNGAALQAEDLETAMRAALAKKGTAAPKFSKL 894
            DFET+ VS+    VLHVE+NRP KRNAMN   W E  E F+RIA D D RVVV+SG G  F+AG+DL D +  E +     D AR+A   R   +  Q SF+ +E+C +PV+AA+HGAC+GG VDL+ ACDIRLCS DA F V EV +G+AADVGTLQR+P+++GN SL  EL YT R   + EA   GLVSR   +   ++ +++ A  +A++I   SPV V G K NLIYSRDHSV+DGL Y ATWN + LQ +DL  + +AA+ KK      +SKL
Sbjct:   35 DFETLRVSQARDSVLHVELNRPEKRNAMNKTLWREMVECFQRIAQDTDQRVVVVSGAGKMFTAGIDLLDMAG-EVLQPQGDDTARKAWHMRNTILQYQESFNVIEKCSKPVIAAVHGACIGGGVDLITACDIRLCSRDAWFQVKEVDIGMAADVGTLQRLPKVIGNASLVSELVYTARMMMADEAQSCGLVSRLFED---KEAMLDGAFEMASEIASKSPVGVQGAKMNLIYSRDHSVKDGLNYIATWNMSMLQTDDLVKSAQAAMEKKSPKDVSYSKL 309
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9199.17001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBQ0_ECTSI6.240e-12867.21Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ect... [more]
A0A6P8I096_ACTTE4.350e-9055.91delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A7D9IU21_PARCT3.050e-8353.24Delta(3,5)-Delta(2,4)-dienoyl- isomerase, mitochon... [more]
A0A3S1BDV2_ELYCH7.080e-8352.69Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
UPI001F04F4302.010e-8252.33delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A835YKC1_9STRA2.700e-8252.50Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tri... [more]
A0A2B4RA31_STYPI8.720e-8251.97Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A401NMA4_SCYTO1.070e-8151.61Uncharacterized protein n=3 Tax=Galeoidea TaxID=11... [more]
A0A1S3K0E9_LINUN1.140e-8151.80delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
UPI0018F54D841.140e-8151.97delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9199contigH-paniculata_contig9199:4154..8615 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.8
Seed ortholog evalue1.1e-105
Seed eggNOG ortholog2880.D8LBQ0
Preferred nameECH1
KEGG koko:K12663
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0031907,GO:0031974,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051750,GO:0055114,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:1901575
EggNOG free text desc.delta3,5-delta2,4-dienoyl-CoA isomerase activity
EggNOG OGsKOG1681@1,KOG1681@2759
Ec32 ortholog descriptionperoxisomal enoyl-coenzyme A hydratase
Ec32 orthologEc-27_003160.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size1937
Cds size852
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9199.17001.1prot_H-paniculata_contig9199.17001.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9199 5194..8570 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931144.4660156-UTR-H-paniculata_contig9199:4153..51931622931144.4660156-UTR-H-paniculata_contig9199:4153..5193Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9199 4154..5193 -
1691481610.8145938-UTR-H-paniculata_contig9199:4153..51931691481610.8145938-UTR-H-paniculata_contig9199:4153..5193Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9199 4154..5193 -
1622931144.5500293-UTR-H-paniculata_contig9199:8570..86151622931144.5500293-UTR-H-paniculata_contig9199:8570..8615Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9199 8571..8615 -
1691481610.8690083-UTR-H-paniculata_contig9199:8570..86151691481610.8690083-UTR-H-paniculata_contig9199:8570..8615Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9199 8571..8615 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931144.4815855-CDS-H-paniculata_contig9199:5193..55471622931144.4815855-CDS-H-paniculata_contig9199:5193..5547Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9199 5194..5547 -
1691481610.8283412-CDS-H-paniculata_contig9199:5193..55471691481610.8283412-CDS-H-paniculata_contig9199:5193..5547Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9199 5194..5547 -
1622931144.495458-CDS-H-paniculata_contig9199:6115..63071622931144.495458-CDS-H-paniculata_contig9199:6115..6307Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9199 6116..6307 -
1691481610.8384943-CDS-H-paniculata_contig9199:6115..63071691481610.8384943-CDS-H-paniculata_contig9199:6115..6307Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9199 6116..6307 -
1622931144.5204172-CDS-H-paniculata_contig9199:7729..78511622931144.5204172-CDS-H-paniculata_contig9199:7729..7851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9199 7730..7851 -
1691481610.8486438-CDS-H-paniculata_contig9199:7729..78511691481610.8486438-CDS-H-paniculata_contig9199:7729..7851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9199 7730..7851 -
1622931144.5339122-CDS-H-paniculata_contig9199:8386..85701622931144.5339122-CDS-H-paniculata_contig9199:8386..8570Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9199 8387..8570 -
1691481610.8587916-CDS-H-paniculata_contig9199:8386..85701691481610.8587916-CDS-H-paniculata_contig9199:8386..8570Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9199 8387..8570 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9199.17001.1

>prot_H-paniculata_contig9199.17001.1 ID=prot_H-paniculata_contig9199.17001.1|Name=mRNA_H-paniculata_contig9199.17001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=284bp
MVVYDDFETVLVSKPALYVLHVEINRPSKRNAMNPRFWWEFREVFERIAN
DDSRVVVISGRGDHFSAGLDLADNSNFEQIGKVTTDVARRALRFRKLAMA
MQASFSAVERCPQPVVAAIHGACVGGAVDLVCACDIRLCSEDARFCVAEV
KVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGSAEAARMGLVSRSLG
ENSRQKEVVEAAMLVAADIVRHSPVAVFGTKRNLIYSRDHSVEDGLEYAA
TWNGAALQAEDLETAMRAALAKKGTAAPKFSKL*
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mRNA from alignment at H-paniculata_contig9199:4154..8615-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9199.17001.1 ID=mRNA_H-paniculata_contig9199.17001.1|Name=mRNA_H-paniculata_contig9199.17001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4462bp|location=Sequence derived from alignment at H-paniculata_contig9199:4154..8615- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTTCAAGTTTCTCTCTTCCGCCGTGTACTCGAGTCCACACAACGATGGT
CGTGTACGACGACTTTGAAACCGTACTGGTATCGAAACCAGCATTATACG
TTCTCCATGTTGAGATCAACAGACCATCGAAGAGAAATGCTATGAACCCA
AGGTTCTGGTGGGAGTTTCGGGAAGTCTTCGAAAGGATAGCTAACGATGA
TTCGCGAGTGGTCGTTATATCTGGACGAGGTATCGTAACACATCTTGTAT
GTTGATTGTCTGTTATTGCGTTATTGCGAACGCCCCAAAGTAAATAACCA
CCACCACTGTGAGAAAACCGTCTCGATATCGATGATAAAACTAACAAACT
ACATCGCGTTGATGCCGTGCGATTGAGGGTGTTGAAGGTGAAGTAAAATA
GTGTTGCTGGCAGCACGTAAAATGTACAAGCTTGTCACAGACTCGTCTAT
CGAGTTCAACCCACCGTACTGGCTGTTGTCTTACTCGTATTTTAAAAACG
ACGCTGTTATCGAGGTCTGCAGGTTGTAATGCTGCAGGCATTTATTTCAC
CAACGGAGTATTGTGCAGCTTTCAGGACAGGGGTGTTCATATGAATTTAT
ACTGTATACTGCAGTGGTCCAGACAGTTGACGCCTATACAGCAAGTAGCC
TATGAGGACATACATGGACATCACCAACAACTGCTATATACCGACTGTAC
CTGTATTCTTATATTTTCCACTCGCAATCACTACATCGTCTCTTGTTTGG
GTGAATTTGGGCAGGCGATCACTTCTCCGCCGGGCTGGACCTCGCTGACA
ATTCCAATTTCGAGCAGATAGGCAAGGTCACGACTGATGTGGCAAGACGA
GCCCTTCGATTTCGCAAGCTCGCCATGGCAATGCAGGTAGCAACAGATGC
ATGACTAACTTCAAACAATGTTCGCGGCTGTCCCACGTTCGTTTTTTCGT
GTTTACCCAGAGAGTGGCTTGTATTACAATACAGACAGTCAGTACTGTTT
CTCGCCTTTATATAGGAATTAGTAAAAGGCCGCAATTTAAGCCCCCTTTC
TTGAACTGGATTTCCTATGGTTTAGCGAAAGTTGAGCCTCATATTCTTAT
TGAATGATTTCTTGTCAGCGGGCCCGTACTGTTTTGGAGTCAGGGTGGGT
GGGAACCCTTACCTTAATAAGCTGTAGAAAAAGCGTGGGCAACGGGGACA
ACCGTTAGATGTGCTCTCCGCATCACCTAACATATGTTGTACTACTCGCT
GCTGTCCCTGTACCGCCGATATGAAGATTCATTATCAGGAATCACTTGAA
TACAAACTGGAAACTATGTTCCGAAACGACCACCAGGACCACCATCTTTA
CCATACCAACACAAGGATTATCGCTTGCAAATACACACAGCCATGAGTTT
GAGCTGTAGAGCTCTATGACCTCAGCATGAGTGCAAATAATGTTGCATAC
TATGAGCAGTACGCGTGGGACTTCGCAGAGCAGGTACGTATTTTTGTCGA
GTAACCATTTCAAAGTCATGTTACACACACATGTCCATGCACAACAGTAC
CGTATAGTACGATGCAAGTGATGTGGTGATGTTCTTTGGTAAAGGCAGAA
ATCCACGTGCTGTTGTTTCCAATAGTTCAAGAAACCCTGGTGCTTGCTCA
TGAACAGGGGCAAGTCTCATGATATCATCATCCATTGGGTCCCGTGCCAA
TTAATCATGCACTATATTCAAGAGCCCAGTCAGTCAGAACCCATGTCCTT
GCCTTTCAATCGTCGGTGTTGCGTAGACAGATGTGGATCAGACGCAGTAT
ACGTGATTGGGGAGCAAGCAATTGTGATTTTTTTTCTCCATCTCGAGTGT
GCGGTGTCACTAGTACGATTTTCGCATTTTCTTAAGGTGCTGGATACTGA
TTGGTGCAAGCCCACCCTTTCTTCCAAGTTCGCGATTTCCCCGAAGTCAA
GGGATTAGTTTTGGGCAACCTGGTTGCTTTTGGCGAACTTATTCCCCAAG
CCCTTTCGCTGGCGTCCGCGCATCCTCGACAGCCCCTTACGATCCCTGTC
GGGTATCTTCCTAGTTAGGTGCTTCTCTTGCTTTCTGCTCGCCCTAACGG
CGGCATTTCTCTTCCTGTACTATACATTTATCGTCATTCGTTCCGCCTGT
CCATTTTGCCCCTACCGCTTCTTGCGAGTTTACTGGAAGTGCTTTGCACA
GTACATGCTAGCAGAAGCACCTCGCAACTTTATTTTCCTGGCTAGAGTTT
TTTCGCAGCTCAACCACATGTTTTTATTTTCTGTTCTTTCGCGTCGTTCA
TACTGCAGGCATCCTTTTCTGCGGTGGAGCGATGCCCACAGCCCGTAGTC
GCCGCAATCCATGGGGCTTGTGTCGGCGGTGCTGTGGACCTCGTATGCGC
TTGCGACATACGGCTGTGCTCGGAAGATGCGCGCTTCTGCGTTGCCGAGG
TCAAAGTTGGACTTGCGGCGGACGTCGGCACTCTGCAGAGGATGCCAAGG
GTGAGATGAGAAAACGAAACACATTCGTGAACATTTCGAAGTTATGAATT
CATCTCTGAATTGCGAGAGCATACTGTTGAGGTAGCACACAACCGTGCTC
CGCGGAAAGGTGGAGTCCAACAGTGCTGTATAAAGCTGCTGGGATGTAAA
GGAGCGATGCCAAATATTGAAAGTACGTAAATGTAGAGCTGAACAAGCAC
CTGTCTCGAGGTCTATCGATATCTTCCTTCTTCCATGCCGCGCCCGGCGA
TCCACGACAAAACTAATATAGGATGATGTGGGCTGACCAGGCAAAAGTTG
CGTAGATGGATATTTGAGGCGAGCACGTTATGGTCTACGTTTGGAAAAAA
GACTAGAACACTGCTGTGAGATTACTGCTCTGTCCCTCCGGAGATACGTG
GTAAGTGGTCTATCGGCCACTACATTCAAATCATGGGTACGCTTCTCTGC
CCCTTCCGTTTTTTTCGCTGCACTCTTGATTAGTCGCCCATTCTGCACTC
CCCGCTGAACACAAAACATGCAATTTCCGGTCATAATGATTCCCCACTAA
TCTCCATGGATTTCACAGATAGTTGGCAACGAATCTCTGTGCCGGGAACT
AGCCTACACGGGTCGAACGTTCGGGTCGGCTGAGGCTGCGCGCATGGGTT
TGGTTTCCCGGTCCCTCGGCGAGAACTCTCGTCAGAAAGAAGTAGTAGAA
GCCGCGATGCTTGTTGCGGCGGATATTGTGCGACACAGTCCCGTAGCGGT
GTTCGGCACGAAACGAAATCTGATTTACAGCAGGGACCACAGCGTGGAGG
ACGGACTAGAATATGCTGCCACATGGAATGGGGCTGCTCTGCAGGCCGAA
GATCTGGAAACTGCGATGCGGGCAGCGCTGGCCAAGAAAGGAACCGCAGC
GCCCAAGTTTTCCAAGCTTTAGCTTGTCATCTGTTAAGTCTAGATAGTTG
CACTCTGGCCCTGAATCTTGCACACGCGGGACGACTAAGGCTAACAGTCG
TACATCGTCGTCATTTGTGTTTTTTATTAGTCGACTGGTTATTCACACCA
ATGAACTGGTAGTCGACTTCATTGTCGGAGTTCAGTCACACCAATCGACG
AACAACGATTAATTGCGTTTTTAGTCCGCGAATTCGTTTGACGGTTGCTG
AACAGGTATTTTTGTATGGTTTTCCTGCCGGTCGACCAATTTGGATGGGT
TGCGGTAATTTGATTAAAATTGTCGCGAATCTTTGCGCTTTGCCTTTTGG
CGTTAGTTCATTGCATTTTCCGAATTCGGCAATGCCACATTATCGTCTGC
GCGATGTCAAACGAACCAAATTTCAACATTTGAACATAACGGAAAGCGGG
TAAAGGCTTATCACTGAATAGGTATTGAGGTGGAAGGAGGGCTTGGCCGC
CGCCGTGCGGATGGGAGTCTCAGTTCTTTGAGGGGAGTCTGTAGGAAGGG
CGGAGGTATATAAAGGATCACTATTTCTTCTTTCCAAGAGGCTTTGGGGT
TTATTGACTTACCGAGGATGCTTGGATGGTATCAGATTTCTTGTAGCCTC
CCTACACCATTTTCGAGTCTTCACATTCGAAAGATAGCTGGTAGAGTAAA
AACGAGTAAAAACGTTAAATGTCACATGCGGCATGATACGCTGACCTTTG
ACCTTTGCAGCCTTTGAAAGCGTCATACCGCGAACCAGTCGCCTTCTCTC
ACACTCAGGGAAACTTTGGGAGATGCTAGACTGACAGTCGTCGGCGTCTT
CACCAATTGACAATTCATCGCAGTAGTCGACTGTCAGTCTTCGACAATTC
CCGGAAATCAGTCGCACCAGTCGATTGGTAGTCGAGTCCATTTTCGGAAA
TCAGTTGAGCCAGTCGACTGGTACACACGAGGCCAAAGTGGTACCTTGTT
GCAGATATTGTCAATGCCTACGCTGTGGTGAGGTTGGCAGTGTTCACACA
ACGTATTAGGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig9199:4154..8615-

>mRNA_H-paniculata_contig9199.17001.1 ID=mRNA_H-paniculata_contig9199.17001.1|Name=mRNA_H-paniculata_contig9199.17001.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1704bp|location=Sequence derived from alignment at H-paniculata_contig9199:4154..8615- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCGTGTACGACGACTTTGAAACCGTACTGGTATCGAAACCAGCATT
ATACGTTCTCCATGTTGAGATCAACAGACCATCGAAGAGAAATGCTATGA
ACCCAAGGTTCTGGTGGGAGTTTCGGGAAGTCTTCGAAAGGATAGCTAAC
GATGATTCGCGAGTGGTCGTTATATCTGGACGAGATGGTCGTGTACGACG
ACTTTGAAACCGTACTGGTATCGAAACCAGCATTATACGTTCTCCATGTT
GAGATCAACAGACCATCGAAGAGAAATGCTATGAACCCAAGGTTCTGGTG
GGAGTTTCGGGAAGTCTTCGAAAGGATAGCTAACGATGATTCGCGAGTGG
TCGTTATATCTGGACGAGGCGATCACTTCTCCGCCGGGCTGGACCTCGCT
GACAATTCCAATTTCGAGCAGATAGGCAAGGTCACGACTGATGTGGCAAG
ACGAGCCCTTCGATTTCGCAAGCTCGCCATGGCAATGCAGGCGATCACTT
CTCCGCCGGGCTGGACCTCGCTGACAATTCCAATTTCGAGCAGATAGGCA
AGGTCACGACTGATGTGGCAAGACGAGCCCTTCGATTTCGCAAGCTCGCC
ATGGCAATGCAGGCATCCTTTTCTGCGGTGGAGCGATGCCCACAGCCCGT
AGTCGCCGCAATCCATGGGGCTTGTGTCGGCGGTGCTGTGGACCTCGTAT
GCGCTTGCGACATACGGCTGTGCTCGGAAGATGCGCGCTTCTGCGTTGCC
GAGGTCAAAGTTGGACTTGCGGCGGACGTCGGCACTCTGCAGAGGATGCC
AAGGGCATCCTTTTCTGCGGTGGAGCGATGCCCACAGCCCGTAGTCGCCG
CAATCCATGGGGCTTGTGTCGGCGGTGCTGTGGACCTCGTATGCGCTTGC
GACATACGGCTGTGCTCGGAAGATGCGCGCTTCTGCGTTGCCGAGGTCAA
AGTTGGACTTGCGGCGGACGTCGGCACTCTGCAGAGGATGCCAAGGATAG
TTGGCAACGAATCTCTGTGCCGGGAACTAGCCTACACGGGTCGAACGTTC
GGGTCGGCTGAGGCTGCGCGCATGGGTTTGGTTTCCCGGTCCCTCGGCGA
GAACTCTCGTCAGAAAGAAGTAGTAGAAGCCGCGATGCTTGTTGCGGCGG
ATATTGTGCGACACAGTCCCGTAGCGGTGTTCGGCACGAAACGAAATCTG
ATTTACAGCAGGGACCACAGCGTGGAGGACGGACTAGAATATGCTGCCAC
ATGGAATGGGGCTGCTCTGCAGGCCGAAGATCTGGAAACTGCGATGCGGG
CAGCGCTGGCCAAGAAAGGAACCGCAGCGCCCAAGTTTTCCAAGCTTTAG
ATAGTTGGCAACGAATCTCTGTGCCGGGAACTAGCCTACACGGGTCGAAC
GTTCGGGTCGGCTGAGGCTGCGCGCATGGGTTTGGTTTCCCGGTCCCTCG
GCGAGAACTCTCGTCAGAAAGAAGTAGTAGAAGCCGCGATGCTTGTTGCG
GCGGATATTGTGCGACACAGTCCCGTAGCGGTGTTCGGCACGAAACGAAA
TCTGATTTACAGCAGGGACCACAGCGTGGAGGACGGACTAGAATATGCTG
CCACATGGAATGGGGCTGCTCTGCAGGCCGAAGATCTGGAAACTGCGATG
CGGGCAGCGCTGGCCAAGAAAGGAACCGCAGCGCCCAAGTTTTCCAAGCT
TTAG
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