mRNA_H-paniculata_contig9191.16994.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Match: D8LQF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQF1_ECTSI) HSP 1 Score: 446 bits (1148), Expect = 3.940e-154 Identity = 228/288 (79.17%), Postives = 253/288 (87.85%), Query Frame = 1
Query: 1 QVTETKESVRVSFGTEEPLVTSEAVKRRLMEMSREQGRCKSTANIYKASTIYIYIYCESQIPVGSYGGLPLNMLLNNVPHSKLARNFIYQGAAEAVVAAVQDSAVPRRMKLVCTVPELNTQMDTYRVGTMLEMVRELAYSLADVGLNTRILIQPSMGEGIFKSLPLSLSGVMSIMKGMDWEEGLVGSHVRFGNLGDRDDMIEEDDVILVIMPQSIAGYSVHELLVDAVEHAAGRPVVIINPNLKDRPSSGGVMQVRGRGDRIAFAESFKDVYNYRLLYASSVGFFPIK 864
+V E+K++VRVSFG + PL TSEAVKRRLMEMSREQG KSTA IYK IPVGSYGGLP+NMLLNNVPHSK+ARNFIY+GAAEA+V AV+D VPRRMKLVCTVPELN MDTYRVGT+LE+VRELAYS+ADVGLNTRILIQPSMG+G+FKSLPL+LSGVMSIM+GMDWE+GLVGSHV FG LG++DD+ EDDVILVI PQSIAGYS+H LLVD VEHA GRPVVIINPNLKDRPSSGGVMQVRGRG+RIAFAESFKD+YN+RLLY SSV FFPIK
Sbjct: 116 KVQESKQTVRVSFGVDRPLETSEAVKRRLMEMSREQGLTKSTATIYK-------------IPVGSYGGLPVNMLLNNVPHSKMARNFIYRGAAEALVLAVEDPTVPRRMKLVCTVPELNPAMDTYRVGTVLELVRELAYSMADVGLNTRILIQPSMGKGVFKSLPLALSGVMSIMQGMDWEDGLVGSHVNFGQLGNKDDVSAEDDVILVISPQSIAGYSIHPLLVDTVEHANGRPVVIINPNLKDRPSSGGVMQVRGRGERIAFAESFKDIYNFRLLYGSSVAFFPIK 390
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Match: A0A6H5J8I4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8I4_9PHAE) HSP 1 Score: 443 bits (1139), Expect = 1.370e-152 Identity = 227/288 (78.82%), Postives = 251/288 (87.15%), Query Frame = 1
Query: 1 QVTETKESVRVSFGTEEPLVTSEAVKRRLMEMSREQGRCKSTANIYKASTIYIYIYCESQIPVGSYGGLPLNMLLNNVPHSKLARNFIYQGAAEAVVAAVQDSAVPRRMKLVCTVPELNTQMDTYRVGTMLEMVRELAYSLADVGLNTRILIQPSMGEGIFKSLPLSLSGVMSIMKGMDWEEGLVGSHVRFGNLGDRDDMIEEDDVILVIMPQSIAGYSVHELLVDAVEHAAGRPVVIINPNLKDRPSSGGVMQVRGRGDRIAFAESFKDVYNYRLLYASSVGFFPIK 864
+V E+K++VRV FG + PL TSEAVKRRLMEMSREQG KSTA IYK IPVGSYGGLP+NMLLNNVPHSK+ARNFIY+GAAEA+V AV+D VPRRMKLVCTVPELN MDTYRVGT+LE+VRELAYS+ADVGLNTRILIQPSMGEG+FKSLPL+LSGVMSIM+GMDWE+GLVGSHV FG LG++DD+ EDDVILVI PQSIAGYS+H LLVD VE A GRPVVIINPNLKDRPSSGGVMQVRGRG+RIAFAESFKD+YN+RLLY SSV FFPIK
Sbjct: 169 KVQESKQTVRVPFGVDRPLETSEAVKRRLMEMSREQGLTKSTATIYK-------------IPVGSYGGLPVNMLLNNVPHSKMARNFIYRGAAEALVQAVEDPTVPRRMKLVCTVPELNPAMDTYRVGTVLELVRELAYSMADVGLNTRILIQPSMGEGVFKSLPLALSGVMSIMQGMDWEDGLVGSHVNFGQLGNKDDVSAEDDVILVISPQSIAGYSIHPLLVDTVEQANGRPVVIINPNLKDRPSSGGVMQVRGRGERIAFAESFKDIYNFRLLYGSSVAFFPIK 443
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Match: A0A7S2RWW2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWW2_9STRA) HSP 1 Score: 206 bits (525), Expect = 2.120e-59 Identity = 124/282 (43.97%), Postives = 173/282 (61.35%), Query Frame = 1
Query: 58 VTSEAVKRRLMEMSREQGRCKSTANIYKASTIYIYIYCESQIPVG-SYGGLPLNMLLNNVPHSKLARNFIYQGAAEAVVAAVQDS--AVPRRMKLVCTVPELNTQMDTYRVGTMLEMVRELAYSLADVGLNTRILIQPSMGEGIFKSLPLSLSGVMSIMKGMDWE-------EGLVGSHVRFGNLGDRD----DMIEEDDVILVIMPQSIAGYSVHELLVDAVEHAAGRPVVIINPNLKDRPSSGGVMQVRGRGDRIAFAESFKDVYNYRLLYASSVGFFPI 861
+T++ KR L+ M+R G ++TA + + +P+G S +P ++ +NNVP+S+ R F Y G +AV A++D + RM++ PELN MD +RVGT+LE+VRE+A LA G RI +QP MGEGIF +PLSL+GV I++ MDW+ EG+V ++VRFG +G D + DDV +VI PQ+I GYSV LL D + A GRPV++INPNLKD SS M VRGR +R+ FA SFK +Y+YR+LY +FPI
Sbjct: 186 LTADEAKRVLLAMARGCGSYEATAQMMR-------------MPIGESSYDMPDDLWVNNVPNSQSTRFFFYDGIVDAVEEALRDPDPTLTPRMQVKVVPPELNPSMDAFRVGTLLELVREIATRLACSGRRVRICVQPPMGEGIFVGMPLSLNGVRRILELMDWQSEPGEAYEGMVPNYVRFGAVGAEDVDSGKGLAPDDVFIVIAPQNIIGYSVIPLLEDMLAQAKGRPVILINPNLKDIQSSEDRMSVRGRSERLQFAASFKTIYDYRVLYPRPSVYFPI 454
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Match: A0A7S1BB49_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BB49_9STRA) HSP 1 Score: 202 bits (515), Expect = 3.790e-58 Identity = 114/247 (46.15%), Postives = 156/247 (63.16%), Query Frame = 1
Query: 190 GSYGGLPLNMLLNNVPHSKLARNFIYQGAAEAVVAAVQ---DSAVPRRMKLVCTVPELNTQMDTYRVGTMLEMVRELAYSLADVGLNTRILIQPSMGEGIFKSLPLSLSGVMSIMKGMDWEE-------GLVGSHVRFGNLG---------DRDDMI--EEDDVILVIMPQSIAGY--SVHELLVDAVEHAAGRPVVIINPNLKDRPSSGGVMQVRGRGDRIAFAESFKDVYNYRLLYASSVGFFPI 861
G GL N+ LN VPH + R + Y AAEAV+ AVQ + V RM+L C PE+N +MD+YR+GT+LE+VR +A +A+ L R+ +Q SMG GIF P SLSGV +++ MDW+ G+VG +V FGN+G D D + E+DDV L++ PQS+ G S+ E L + V+ A RPV+++NP+L DRPSS G VRGR +RIAFA+SF+ +Y+ R LY SS G+FPI
Sbjct: 200 GERAGLLDNLFLNVVPHGREVRRYFYGMAAEAVLNAVQRCGNGQVTNRMQLTCLFPEMNPEMDSYRIGTLLELVRNIATVIAEQNLRVRVCVQGSMGVGIFTGTPKSLSGVSTLLNRMDWQSEEGERNAGMVGDYVNFGNVGSEHVMDTQIDADGTVLQEQDDVFLLLCPQSMVGVDASIVEPLQEMVKAAGDRPVILLNPSLVDRPSSDGQQGVRGRSERIAFAKSFQTIYHMRCLYDSSTGYFPI 446
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Match: A0A7S1IBG8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IBG8_9EUGL) HSP 1 Score: 189 bits (480), Expect = 2.470e-55 Identity = 101/213 (47.42%), Postives = 138/213 (64.79%), Query Frame = 1
Query: 223 LNNVPHSKLARNFIYQGAAEAVVAAVQDSAVPRRMKLVCTVPELNTQMDTYRVGTMLEMVRELAYSLADVGLNTRILIQPSMGEGIFKSLPLSLSGVMSIMKGMDWEEGLVGSHVRFGNLGDRDDMIEEDDVILVIMPQSIAGYSVHELLVDAVEHAAGRPVVIINPNLKDRPSSGGVMQVRGRGDRIAFAESFKDVYNYRLLYASSVGFFPI 861
LN PH R Y A +++V A+Q A RM++ PELNT+ D +R GTMLEMVR A LA G RI+IQ +G GIF LPLSL+G+M + + MDW++ +VG + +G +G D +E DV L+IMPQ+I GYS+ L + E A + +V+INPNLKD SSGGVM RGR DR+AFA+SF+++Y++RL+Y F+PI
Sbjct: 13 LNKTPHDPEIRQHFYDDARDSLVRALQ--AGETRMQIRTVFPELNTESDVFRAGTMLEMVRHFATFLAADGTRVRIVIQQPLGTGIFLGLPLSLNGLMRMAQKMDWDDSVVGDRISYGQIGA--DQLEGADVFLIIMPQNITGYSIVPYLEEMCEAAGNKAIVLINPNLKDIQSSGGVMSYRGRDDRMAFADSFEEIYHFRLMYQRPF-FYPI 220
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Match: R1FD59_EMIHU (DUF1995 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FD59_EMIHU) HSP 1 Score: 194 bits (492), Expect = 6.660e-54 Identity = 109/234 (46.58%), Postives = 155/234 (66.24%), Query Frame = 1
Query: 205 LPLNMLLNNVPHSKLARNFIYQGAAEAVVAAVQDSAVPRRMKLVCTVPELNTQMDTYRVGTMLEMVRELAYSLADVGLNTRILIQPSMGEGIFKSLPLSLSGVMSIMKGMDWE-------EGLVGSH-----VRFGNLGDRDDMIEEDDVILVIMPQSIAGYSVHELLVDAVEHAA---GRPVVIINPNLKDRPSSGGVMQVRGRGDRIAFAESFKDVYNYRLLYASSVGFFPI 861
LP ++ LN P+ + R +Y A AV AAV D A PRRMKL+ PELN +MD+YRVG+MLE+VR+++ LA GL+TR+ +Q SMGEG+ +P L+GV ++ MDW+ EGL+G+ VRFG +G +++ +DDV+LV+ PQS+ G + L +A+ AA G VV+INP L+DR SS GVM VRGR +R+AFAESF ++Y++RLLY+ + +PI
Sbjct: 296 LPRDLWLNTTPYPREVREMVYSDVAAAVQAAVADPACPRRMKLLVAPPELNMEMDSYRVGSMLELVRKVSLDLAACGLHTRVCVQGSMGEGVLAGVPRVLAGVSKLLGMMDWQAGEGEPNEGLLGAGAADALVRFGAIGG-EEVAPDDDVLLVLAPQSMVGAPIVPPL-EALSEAAVSQGSAVVLINPLLQDRQSSSGVMGVRGRAERLAFAESFAEIYHFRLLYSGTTFMYPI 527
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Match: W7TPW6_9STRA (DUF1995 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPW6_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.250e-53 Identity = 108/273 (39.56%), Postives = 159/273 (58.24%), Query Frame = 1
Query: 31 VSFGTEEPLVTSEAVKRRLMEMSREQGRCKSTANIYKASTIYIYIYCESQIPV--GSYGGLPLNMLLNNVPHSKLARNFIYQGAAEAVVAAVQDSAVPRRMKLVCTVPELNTQMDTYRVGTMLEMVRELAYSLADVGLNTRILIQPSMGEGIFKSLPLSLSGVMSIMKGMDWE-------EGLVGSHVRFGNLGDRDDMIEEDDVILVIMPQSIAGYSVHELLVDAVEHAAGRPVVIINPNLKDRPSSGGVMQVRGRGDRIAFAESFKDVYNY 822
++F T+ V R ++ M+ G STA++YK IPV G + +P N+ +N VP R F Y AV AA++D + P RM + PE N DTYR+GT+LE+VRELA+ G ++ +Q MGEGIFK LP+SL+G I++ MDW+ EG+VG+ + FG +G+ + EEDDV ++I PQ++ G S+ LL A RP +++NP+L+DRPS+G VMQVRGR +R+AF ++FK V+ +
Sbjct: 162 ITFSTQRIRSRPADVIRAMISMASTIGDEDSTASLYK-------------IPVDDGKWV-IPNNLYMNGVPWKPFTRQFFYNRIVRAVDAAIRDPSFPNRMAIKFLTPESNPAFDTYRIGTILELVRELAFHQVSCGKRVKLCVQQKMGEGIFKGLPISLNGCRFILENMDWQSKEGEEKEGVVGTQIHFGEVGEHV-VEEEDDVFILIAPQNVVGVSIIPLLEAMARKAGDRPFIVLNPSLRDRPSAGDVMQVRGREERMAFGKTFKTVFAF 419
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Match: A0A5J4Y9U0_9CHLO (Adenylate kinase family isoform 1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y9U0_9CHLO) HSP 1 Score: 186 bits (473), Expect = 2.050e-53 Identity = 100/221 (45.25%), Postives = 146/221 (66.06%), Query Frame = 1
Query: 205 LPLNMLLNNVPHSKLARNFIYQGAAEAVVAAVQDSAVPRRMKLVCTVPELNTQMDTYRVGTMLEMVRELAYSLADVGLNTRILIQPSMGEGIFKSLPLSLSGVMSIMKGMDWEEGLVGSHVRFGNLGDRDDMIEEDDVILVIMPQSIAGYSVHELLVDAVEHAA--GRPVVIINPNLKDRPSSGGVMQVRGRGDRIAFAESFKDVYNYRLLYASSVGFFPI 861
LP M N++PH + R + Y +A++ A+ D RM++ CT+PELN +MD YR+GT+LEMVRE+AY+LA+ G ++ +Q SMG+G+F+ LPLSLSGV IM MDW G +G V FG +G D I++ +++ PQ++ G ++ L D V+ A G+ V+++NP LKD PS+ GVM VRGR +R+AFA+SF Y++R LY SS +PI
Sbjct: 78 LPTRM--NDIPHHRDKRRWFYNEVTQAMLTALSDGQT--RMRIRCTIPELNPEMDVYRIGTLLEMVREMAYALAEDGKLVKVCVQQSMGQGVFQGLPLSLSGVRKIMNMMDW--GDIGEFVSFGEVGR--DQIDKASYYILVAPQNVVGTTILTNLGDMVDEAESQGKAVILMNPVLKDIPSAAGVMGVRGRAERMAFADSFIQAYHFRHLYLSSQMMYPI 290
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Match: A0A7S0DZM2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DZM2_9CRYP) HSP 1 Score: 184 bits (467), Expect = 2.610e-53 Identity = 108/257 (42.02%), Postives = 158/257 (61.48%), Query Frame = 1
Query: 190 GSYG-GLPLNMLLNNVPHSKLARNFIYQGAAEAVVAAVQDSAVPR----RMKLVCTVPELNTQMDTYRVGTMLEMVRELAYSLADV-GLNTRILIQPSMGEGIFKSLPLSLSGVMSIMKGMDWE-------EGLV------------------GSHVRFGNLGDRDDMIEEDDVILVIMPQSIAGYSVHELLVDAVEHAA-GRPVVIINPNLKDRPSSGGVMQVRGRGDRIAFAESFKDVYNYRLLYASSVGFFPIK 864
GS G +P ++ LN +P + R++ Y+ +AV A+QD+++ R+K+ C PELN +MD++RVGTMLEMVRE+A + V G ++ IQ S+GEGIF +PL L+G+ +M+GMDW+ EGL+ V FG +G R+ + +ED+V ++I PQS+ G SV+E L VE A R V++INP LKDRPSS VM V+GR RIAFA SF++++++RLLY + FPI+
Sbjct: 1 GSRGWSIPDHLFLNEIPCNPEIRDWFYRDVCDAVQVALQDASLLESCAGRLKIECVPPELNPEMDSFRVGTMLEMVREIAIRIGVVMGRRVKVCIQGSLGEGIFTGMPLMLNGMRRVMEGMDWQSREGEMYEGLLINDIINRRTGEVAIPGNKEGRVAFGEVG-REQVEDEDEVFIIIAPQSMVGASVYEPLSQMVEAAGPNRTVILINPRLKDRPSSSNVMSVQGRSQRIAFAASFREIFHFRLLYTGTTFMFPIQ 256
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Match: A0A2K1IJV4_PHYPA (DUF1995 domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IJV4_PHYPA) HSP 1 Score: 185 bits (469), Expect = 1.040e-52 Identity = 95/224 (42.41%), Postives = 147/224 (65.62%), Query Frame = 1
Query: 172 ESQIPVGSYGGLPLNMLLNNVPHSKLARNFIYQGAAEAVVAAVQDSAVPRRMKLVCTVPELNTQMDTYRVGTMLEMVRELAYSLADVGLNTRILIQPSMGEGIFKSLPLSLSGVMSIMKGMDWEEGLV-GSHVRFGNLGDRDDMIEEDDVILVIMPQSIAGYSVHELLVDAVEHAAGRPVVIINPNLKDRPSSGGVMQVRGRGDRIAFAESFKDVYNYRLLYAS 840
E+ V + G+P LN PHS+ R + Y+ A +A A+ D ++K++ T+PELN +MD YR+GT+LE++RELA++ A+ G R+ +Q MGEGIF +PL+LSG +++ MDW E + + +RFG +G ++ + ++DD+ +++ PQ+ G + + L VE A RPV+I+NP LKD P+SGG+MQV GR +R+ FAESF YN+RL+Y S
Sbjct: 70 ETGDKVSGWRGVPTK--LNTCPHSREIRQYFYKDACQAAKNAIDDGK--HKLKVLLTIPELNPEMDVYRIGTLLELIRELAFTFANDGKRVRVCVQGPMGEGIFSGMPLALSGTRPMLERMDWGEYIEKDTFIRFGAVGAKE-VYDDDDMFILMAPQNAVGNCIIDDLKAMVEAAGDRPVIILNPKLKDIPASGGIMQVGGRQERMEFAESFFTCYNFRLMYTS 288 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9191.16994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9191.16994.1 >prot_H-paniculata_contig9191.16994.1 ID=prot_H-paniculata_contig9191.16994.1|Name=mRNA_H-paniculata_contig9191.16994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=288bp QVTETKESVRVSFGTEEPLVTSEAVKRRLMEMSREQGRCKSTANIYKASTback to top mRNA from alignment at H-paniculata_contig9191:865..9663- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9191.16994.1 ID=mRNA_H-paniculata_contig9191.16994.1|Name=mRNA_H-paniculata_contig9191.16994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8799bp|location=Sequence derived from alignment at H-paniculata_contig9191:865..9663- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9191:865..9663- >mRNA_H-paniculata_contig9191.16994.1 ID=mRNA_H-paniculata_contig9191.16994.1|Name=mRNA_H-paniculata_contig9191.16994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1728bp|location=Sequence derived from alignment at H-paniculata_contig9191:865..9663- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |