mRNA_H-paniculata_contig9174.16983.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI) HSP 1 Score: 376 bits (966), Expect = 4.440e-118 Identity = 214/301 (71.10%), Postives = 234/301 (77.74%), Query Frame = 1
Query: 1 PSLSGRQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDD--REDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQA-TPDASELLPPEPLSGDE---ATPATFVDTAEGLDAMIQHILGD---------RRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
P G++DYAYNATFPEFR+RAEGCGKQVLEVIQIF+NHV QEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEA+GKGANQQVALMRHQL+TVASAAR GPAKYASMV+NVV++PKPQ F EIDNSR+TPFVP+LR K NAVTPLDLAPIS L T++GM + ED+M+ S G LDFHYPHPYEVEIRAFHYMP Q P S+L+ P PL GDE A ATFVDT E LD+MI ILGD XXXXXX AR C EIA+DLEHHSFR F
Sbjct: 50 PDGEGQEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVSQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEAAGKGANQQVALMRHQLKTVASAARSGPAKYASMVSNVVDMPKPQEAFQEEIDNSRDTPFVPKLREKPNAVTPLDLAPISTLSTSMGMELEGRAEDSMSGS--GLLDFHYPHPYEVEIRAFHYMPAQVKAPLDSQLVRPVPLVGDEGHKAPAATFVDTVEALDSMISDILGDGAPGXXXXXXXXXXXXXXXXXXXXXXXXPAREACREIAVDLEHHSFRTF 348
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A7S3UZH7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UZH7_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.120e-17 Identity = 103/328 (31.40%), Postives = 151/328 (46.04%), Query Frame = 1
Query: 4 SLSG-RQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGEL-GLPEVGDA--GDPEVFQGIADVVETLLEDVDSYLDEA-------SGK-------GANQQVALMRHQLRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLD---LAPISDLP---------TTLGMTDDREDTMAD---------STGGGLDFH----YPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
SL G +DY+Y A+ PEF+ + K+++ +I F + V EL L E+ DA D E F+ +ADVV+ LLE+VDSYLDEA SG AN QV + + +L A G ++ + NI +PQ F + IDNSR +PF+P+L+ K +A+ PL LAP+ LP + DD E + S G L+ H Y +PYE EIR H + + +L P L D+ TP T++++ L + + + EI+IDLE+HS+R F
Sbjct: 37 SLPGDEEDYSYYASLPEFKDKIGNFRKRIVNLIYKFASRVDSSDELFKLHELIDADPADFETFEPVADVVDLLLENVDSYLDEARRHSDNLSGLEKSNPSINANAQVEVSKSELVRDVRAGLNG------VITHDANIQRPQMNFDDAIDNSR-SPFIPKLKHKVHAIVPLPENGLAPM--LPEEKEGESRDSLYHNNDDLEPSSESLSLVEAHVRSLGVDLEKHTQPRYANPYETEIR--HALASPPSWIFQKLEPTRFLELDK-TPCTWINSVYQLKKLCNDLEEE-------------------------IEISIDLENHSYRSF 327
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A1Y1ZAM6_9FUNG (HRDC domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZAM6_9FUNG) HSP 1 Score: 92.8 bits (229), Expect = 1.900e-17 Identity = 81/265 (30.57%), Postives = 121/265 (45.66%), Query Frame = 1
Query: 67 EGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQ-LRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
+ C +VL + + H + ++ D D + G+ DVV+ LLE D LDE +GK N ++ Q +VA A A+Y + A NI +PQ F + IDNS TP++ +++ K NA+ PLD S L T L +++ + M + G + PHPYE E+ Y +L P + T AT+VDT EGL+ M+ + G + EIA+DLEHHS+R F
Sbjct: 55 DNCSSKVLRMSNELLKHAGGDIADTYYDLDDVQDR--YDGVVDVVDNLLEKADVCLDEHTGK-LNASLSTATFQSAASVAKLATDDKAEYHLIHAQ--NILRPQLKFKDTIDNSASTPWIRKIQEKPNALVPLDYGLPSSL-TQLKVSEALANHMKNMGYGDVTMSLPHPYEYELNHQPYPEHVLEGKPEQLYTPF-----DTTSATWVDTEEGLEQMMLKLEGVK-------------------------EIAVDLEHHSYRTF 283
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A8H7PG65_MORIS (HRDC domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PG65_MORIS) HSP 1 Score: 91.3 bits (225), Expect = 6.320e-17 Identity = 89/277 (32.13%), Postives = 122/277 (44.04%), Query Frame = 1
Query: 31 YNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIA-DVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
Y + +F + C ++VL++ + + E D D G+A DVV+ LLE D LDE GK N+ +M VA A G Y + A NI +PQ F + IDNS TPF+P+L K N PLD I+DL + + + + D GL + HPYE EI+ Y P Q + SE + S + T AT+VD E L M +L++A TEIAIDLEHH +R F
Sbjct: 47 YRSLDRDFAKTLDSCSEKVLKLSNSMLKYASVEESESASRFHDVDDVLDRYGVAIDVVDNLLEKADVGLDELRGK-RNRTEPVMNQTDPVVAQVATKGKNDYKMLHAQ--NIIRPQLRFKDTIDNSSNTPFIPKLTFKPNNKVPLD-PNIADLASKIASKNFKLDDAM-----GLK-PFSHPYEYEIKHIEY-PDQLFTEKSEQI----YSPFDDTQATWVDNEETLKEMCS------KLEAA-------------------TEIAIDLEHHDYRSF 283
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A815ZIX0_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A815ZIX0_ADIRI) HSP 1 Score: 88.6 bits (218), Expect = 5.240e-16 Identity = 83/309 (26.86%), Postives = 124/309 (40.13%), Query Frame = 1
Query: 7 LSGRQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASG-KGANQQVALMRHQLRTVASA-------------------ARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFH---YPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGD--EATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
LS D+ + +FP R R + ++L+ + + +LG+ +A E + + D+ + L E + S LDE +G K + +V ++ +R V + + +AS NIPKPQ F +++DNS PF+ +LR K NA TPL + P T + +D H + HPY EI F PD S L P EP E T FVDT + L M+ HI +E+AIDLEHHS+R +
Sbjct: 45 LSRANDHDFLMSFPPLRRRMDAVADRILQNMSKILKQQNLRRDLGITSWKEADHDEKLEKLIDINDVLFERISSSLDEVAGLKKTSTEVKSLKPSVRNVHATWNKETGFVLQNNVFPSNQHHKQRSNTFASNHQQTKNIPKPQLKFSDKVDNSLYAPFITKLRIKPNAKTPLPMVLSQFDPQTFNVL-------------RIDEHPELFAHPYFDEIETFE-------PDESVLKPIEPQKPQPIEETKYLFVDTPDTLKIMMDHIEQQ-------------------------SELAIDLEHHSYRSY 308
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A8H7PPR4_9FUNG (HRDC domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PPR4_9FUNG) HSP 1 Score: 87.4 bits (215), Expect = 1.270e-15 Identity = 84/270 (31.11%), Postives = 120/270 (44.44%), Query Frame = 1
Query: 52 FRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIA-DVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
F + C ++VL++ + + E E P D D IA DVV+ LLE D LDE G+ N+ +M VA A G A Y + A NI +PQ F + IDNS TPF+P+L K ++ T LD I++L + + + D + ++ HPYE EI+ Y P Q + E + + E T AT+VD E L M +L++A TEIA+DLEHH +R F
Sbjct: 52 FAKTLDSCSEKVLKLSNNMLKYASVEEEEAAPRFYDIDDVMDRYNIAIDVVDNLLEKADVGLDELRGQ-RNRTEPIMNQTSPVVAQVATKGKADYKMLHAQ--NIIRPQLRFKDTIDNSSNTPFIPKLTFKPHSKTALDPR-ITELQSLSLTSSHKSDEILAASS------LAHPYEYEIKHIEY-PEQLFEEKPEQI----YTPFEDTKATWVDNEETLKEMCS------KLEAA-------------------TEIAVDLEHHDYRSF 281
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A817VGA2_9BILA (Hypothetical protein n=13 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A817VGA2_9BILA) HSP 1 Score: 87.0 bits (214), Expect = 1.750e-15 Identity = 87/308 (28.25%), Postives = 131/308 (42.53%), Query Frame = 1
Query: 7 LSGRQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASG-KGANQQVALMRHQLRTVASA-------------------ARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDRE-DTMADSTGGGLDFHYP---HPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
LS D+ + +F R R + +++L+ + + +LG+ +A + + + D+ + L E + S LDEA+G K + +V + +R V + + + +A NIPKPQ F +++DN+ TPF+P+LRTK NA+TPL P D R DT+ L+ H HPY EI AF P + E+ P S DE T FVDT + L MI HI + S E+AIDLEHHS+R +
Sbjct: 40 LSRASDHDFLMSFAPLRRRMDTVAEKILQNMNSLLKQQNLRRDLGIVSWKEADYDDKIEKLIDINDILFERISSSLDEAAGLKKISSEVKSLVPSIRNVPATWNKEDGFVLQESIPTFKQQQKRSSSTFAINHQQTKNIPKPQIKFTDKVDNNPHTPFIPKLRTKPNAITPL--------PIMFSQLDSRSSDTLL------LERHPEILLHPYFDEIEAFE--PNENL--LKEVKVQVPKSLDE-TKYLFVDTPDKLKTMIDHI----EIQS---------------------ELAIDLEHHSYRSY 303
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A8H7VL00_9FUNG (HRDC domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VL00_9FUNG) HSP 1 Score: 85.1 bits (209), Expect = 7.440e-15 Identity = 74/277 (26.71%), Postives = 119/277 (42.96%), Query Frame = 1
Query: 49 EFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDP-EVFQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTL------GMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
+F + CG ++L+ + + + + D D + F + DV+++L+E D LDE +G+ + V ++ Q VA ++G K + + NI +PQ F + +DNS TPF+ +++TK +A+ PL + + G+T TM + G PHPYE EI Y + E + EP EAT A +VD E L+ M+ + EIAIDLEHH++R F
Sbjct: 46 QFAKDLDTCGSRILKASNQLLQQCSADTGVQVNNYEDIDDVNDRFGSVVDVIDSLIEKADVCLDEMTGQKGRKNVQQIKQQPTEVAQVSKG---KLEYKLLHASNIIRPQMKFKDPVDNSNNTPFIRKIKTKPHAMVPLSYGMQRNFMSWRKKKMGKGIT---PKTMEEVEEGKATHSLPHPYEYEIEHITYP--EFMFQEKEPIMYEPF---EATTAAWVDDDESLEKMMDELAK-------------------------VQEIAIDLEHHNYRSF 286
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A816LTF3_9BILA (Hypothetical protein n=13 Tax=Rotaria TaxID=231623 RepID=A0A816LTF3_9BILA) HSP 1 Score: 83.2 bits (204), Expect = 3.460e-14 Identity = 80/306 (26.14%), Postives = 127/306 (41.50%), Query Frame = 1
Query: 7 LSGRQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASG-KGANQQVALMRHQLRTVASA-------------------ARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLD--LAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
LS D+ + +F R R + ++VL+ + + +LG+ +A + + + D+ + L E + S LDEA+G K + +V + +R VA+ + + ++ NIPKPQ F +++DN+ + PF+P+LRTK NA+ PL L P + + D + + HPY EI AF P E+ P P S DE T +VDT + L M HI +E+AIDLEHHS+R +
Sbjct: 40 LSRSSDHDFLMSFAPLRRRMDTIAEKVLQNMHSLLQQQNLSRDLGIISWKEADRDDKIEKLIDINDILFERISSSLDEAAGLKKNSSEVKALIPSIRNVAATWNREVGFILQENIPSFKQQNKRNSSTFSINHQQTKNIPKPQLKFTDKVDNNPQIPFIPKLRTKPNAIAPLAMMLLQFDARPFDMLLLDRHPEVLQ------------HPYFEEIEAF--QPNDNL--LKEVTPQLPKSLDE-TKYLYVDTPDKLKTMNDHIENQ-------------------------SELAIDLEHHSYRSY 303
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: V5FU90_BYSSN (Exosome component 3'-5' exonuclease n=1 Tax=Byssochlamys spectabilis (strain No. 5 / NBRC 109023) TaxID=1356009 RepID=V5FU90_BYSSN) HSP 1 Score: 82.4 bits (202), Expect = 6.130e-14 Identity = 72/224 (32.14%), Postives = 98/224 (43.75%), Query Frame = 1
Query: 178 FQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTVASAARGGPAKYASMVANV--VNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHH 843
++G+ DV++TLLE D+ LDE +G ++++ + Q A R P + + + IPKPQ F DN+ PF P LRTK +A+ PL+ E +G G Y +PYE EIRA Y P T PP E+T ATFVDT EGL AM++ + + EIAIDLEHH
Sbjct: 86 WRGVVDVIDTLLEKADACLDEFTG--VIKKLSPSQQQQEGNAPPKRKDPTQKFPTIYDYGPSKIPKPQLQFDRTPDNTDVAPFRPLLRTKPHAIVPLE-----------------ESLQLIDSGKG----YKNPYETEIRASKYPPSTYTSS-----PPIEYLPFESTTATFVDTLEGLKAMLEELKSAK-------------------------EIAIDLEHH 256 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9174.16983.1 >prot_H-paniculata_contig9174.16983.1 ID=prot_H-paniculata_contig9174.16983.1|Name=mRNA_H-paniculata_contig9174.16983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp PSLSGRQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEback to top mRNA from alignment at H-paniculata_contig9174:424..6122- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9174.16983.1 ID=mRNA_H-paniculata_contig9174.16983.1|Name=mRNA_H-paniculata_contig9174.16983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5699bp|location=Sequence derived from alignment at H-paniculata_contig9174:424..6122- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9174:424..6122- >mRNA_H-paniculata_contig9174.16983.1 ID=mRNA_H-paniculata_contig9174.16983.1|Name=mRNA_H-paniculata_contig9174.16983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1716bp|location=Sequence derived from alignment at H-paniculata_contig9174:424..6122- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |