mRNA_H-paniculata_contig9174.16983.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9174.16983.1
Unique NamemRNA_H-paniculata_contig9174.16983.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 4.440e-118
Identity = 214/301 (71.10%), Postives = 234/301 (77.74%), Query Frame = 1
Query:    1 PSLSGRQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDD--REDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQA-TPDASELLPPEPLSGDE---ATPATFVDTAEGLDAMIQHILGD---------RRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
            P   G++DYAYNATFPEFR+RAEGCGKQVLEVIQIF+NHV QEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEA+GKGANQQVALMRHQL+TVASAAR GPAKYASMV+NVV++PKPQ  F  EIDNSR+TPFVP+LR K NAVTPLDLAPIS L T++GM  +   ED+M+ S  G LDFHYPHPYEVEIRAFHYMP Q   P  S+L+ P PL GDE   A  ATFVDT E LD+MI  ILGD                    XXXXXX   AR  C EIA+DLEHHSFR F
Sbjct:   50 PDGEGQEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVSQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEAAGKGANQQVALMRHQLKTVASAARSGPAKYASMVSNVVDMPKPQEAFQEEIDNSRDTPFVPKLREKPNAVTPLDLAPISTLSTSMGMELEGRAEDSMSGS--GLLDFHYPHPYEVEIRAFHYMPAQVKAPLDSQLVRPVPLVGDEGHKAPAATFVDTVEALDSMISDILGDGAPGXXXXXXXXXXXXXXXXXXXXXXXXPAREACREIAVDLEHHSFRTF 348          
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A7S3UZH7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UZH7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.120e-17
Identity = 103/328 (31.40%), Postives = 151/328 (46.04%), Query Frame = 1
Query:    4 SLSG-RQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGEL-GLPEVGDA--GDPEVFQGIADVVETLLEDVDSYLDEA-------SGK-------GANQQVALMRHQLRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLD---LAPISDLP---------TTLGMTDDREDTMAD---------STGGGLDFH----YPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
            SL G  +DY+Y A+ PEF+ +     K+++ +I  F + V    EL  L E+ DA   D E F+ +ADVV+ LLE+VDSYLDEA       SG         AN QV + + +L     A   G      ++ +  NI +PQ  F + IDNSR +PF+P+L+ K +A+ PL    LAP+  LP         +     DD E +            S G  L+ H    Y +PYE EIR  H +    +    +L P   L  D+ TP T++++   L  +   +  +                          EI+IDLE+HS+R F
Sbjct:   37 SLPGDEEDYSYYASLPEFKDKIGNFRKRIVNLIYKFASRVDSSDELFKLHELIDADPADFETFEPVADVVDLLLENVDSYLDEARRHSDNLSGLEKSNPSINANAQVEVSKSELVRDVRAGLNG------VITHDANIQRPQMNFDDAIDNSR-SPFIPKLKHKVHAIVPLPENGLAPM--LPEEKEGESRDSLYHNNDDLEPSSESLSLVEAHVRSLGVDLEKHTQPRYANPYETEIR--HALASPPSWIFQKLEPTRFLELDK-TPCTWINSVYQLKKLCNDLEEE-------------------------IEISIDLENHSYRSF 327          
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A1Y1ZAM6_9FUNG (HRDC domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZAM6_9FUNG)

HSP 1 Score: 92.8 bits (229), Expect = 1.900e-17
Identity = 81/265 (30.57%), Postives = 121/265 (45.66%), Query Frame = 1
Query:   67 EGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQ-LRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
            + C  +VL +    + H   +      ++ D  D   + G+ DVV+ LLE  D  LDE +GK  N  ++    Q   +VA  A    A+Y  + A   NI +PQ  F + IDNS  TP++ +++ K NA+ PLD    S L T L +++   + M +   G +    PHPYE E+    Y          +L  P      + T AT+VDT EGL+ M+  + G +                         EIA+DLEHHS+R F
Sbjct:   55 DNCSSKVLRMSNELLKHAGGDIADTYYDLDDVQDR--YDGVVDVVDNLLEKADVCLDEHTGK-LNASLSTATFQSAASVAKLATDDKAEYHLIHAQ--NILRPQLKFKDTIDNSASTPWIRKIQEKPNALVPLDYGLPSSL-TQLKVSEALANHMKNMGYGDVTMSLPHPYEYELNHQPYPEHVLEGKPEQLYTPF-----DTTSATWVDTEEGLEQMMLKLEGVK-------------------------EIAVDLEHHSYRTF 283          
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A8H7PG65_MORIS (HRDC domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PG65_MORIS)

HSP 1 Score: 91.3 bits (225), Expect = 6.320e-17
Identity = 89/277 (32.13%), Postives = 122/277 (44.04%), Query Frame = 1
Query:   31 YNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIA-DVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
            Y +   +F    + C ++VL++    + +   E         D  D     G+A DVV+ LLE  D  LDE  GK  N+   +M      VA  A  G   Y  + A   NI +PQ  F + IDNS  TPF+P+L  K N   PLD   I+DL + +   + + D        GL   + HPYE EI+   Y P Q   + SE +     S  + T AT+VD  E L  M        +L++A                   TEIAIDLEHH +R F
Sbjct:   47 YRSLDRDFAKTLDSCSEKVLKLSNSMLKYASVEESESASRFHDVDDVLDRYGVAIDVVDNLLEKADVGLDELRGK-RNRTEPVMNQTDPVVAQVATKGKNDYKMLHAQ--NIIRPQLRFKDTIDNSSNTPFIPKLTFKPNNKVPLD-PNIADLASKIASKNFKLDDAM-----GLK-PFSHPYEYEIKHIEY-PDQLFTEKSEQI----YSPFDDTQATWVDNEETLKEMCS------KLEAA-------------------TEIAIDLEHHDYRSF 283          
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A815ZIX0_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A815ZIX0_ADIRI)

HSP 1 Score: 88.6 bits (218), Expect = 5.240e-16
Identity = 83/309 (26.86%), Postives = 124/309 (40.13%), Query Frame = 1
Query:    7 LSGRQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASG-KGANQQVALMRHQLRTVASA-------------------ARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFH---YPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGD--EATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
            LS   D+ +  +FP  R R +    ++L+ +   +       +LG+    +A   E  + + D+ + L E + S LDE +G K  + +V  ++  +R V +                     +     +AS      NIPKPQ  F +++DNS   PF+ +LR K NA TPL +      P T  +               +D H   + HPY  EI  F        PD S L P EP      E T   FVDT + L  M+ HI                            +E+AIDLEHHS+R +
Sbjct:   45 LSRANDHDFLMSFPPLRRRMDAVADRILQNMSKILKQQNLRRDLGITSWKEADHDEKLEKLIDINDVLFERISSSLDEVAGLKKTSTEVKSLKPSVRNVHATWNKETGFVLQNNVFPSNQHHKQRSNTFASNHQQTKNIPKPQLKFSDKVDNSLYAPFITKLRIKPNAKTPLPMVLSQFDPQTFNVL-------------RIDEHPELFAHPYFDEIETFE-------PDESVLKPIEPQKPQPIEETKYLFVDTPDTLKIMMDHIEQQ-------------------------SELAIDLEHHSYRSY 308          
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A8H7PPR4_9FUNG (HRDC domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PPR4_9FUNG)

HSP 1 Score: 87.4 bits (215), Expect = 1.270e-15
Identity = 84/270 (31.11%), Postives = 120/270 (44.44%), Query Frame = 1
Query:   52 FRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIA-DVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
            F    + C ++VL++    + +   E E   P   D  D      IA DVV+ LLE  D  LDE  G+  N+   +M      VA  A  G A Y  + A   NI +PQ  F + IDNS  TPF+P+L  K ++ T LD   I++L +    +  + D +  ++         HPYE EI+   Y P Q   +  E +     +  E T AT+VD  E L  M        +L++A                   TEIA+DLEHH +R F
Sbjct:   52 FAKTLDSCSEKVLKLSNNMLKYASVEEEEAAPRFYDIDDVMDRYNIAIDVVDNLLEKADVGLDELRGQ-RNRTEPIMNQTSPVVAQVATKGKADYKMLHAQ--NIIRPQLRFKDTIDNSSNTPFIPKLTFKPHSKTALDPR-ITELQSLSLTSSHKSDEILAASS------LAHPYEYEIKHIEY-PEQLFEEKPEQI----YTPFEDTKATWVDNEETLKEMCS------KLEAA-------------------TEIAVDLEHHDYRSF 281          
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A817VGA2_9BILA (Hypothetical protein n=13 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A817VGA2_9BILA)

HSP 1 Score: 87.0 bits (214), Expect = 1.750e-15
Identity = 87/308 (28.25%), Postives = 131/308 (42.53%), Query Frame = 1
Query:    7 LSGRQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASG-KGANQQVALMRHQLRTVASA-------------------ARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDRE-DTMADSTGGGLDFHYP---HPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
            LS   D+ +  +F   R R +   +++L+ +   +       +LG+    +A   +  + + D+ + L E + S LDEA+G K  + +V  +   +R V +                     +   + +A       NIPKPQ  F +++DN+  TPF+P+LRTK NA+TPL        P      D R  DT+       L+ H     HPY  EI AF   P +      E+    P S DE T   FVDT + L  MI HI     + S                     E+AIDLEHHS+R +
Sbjct:   40 LSRASDHDFLMSFAPLRRRMDTVAEKILQNMNSLLKQQNLRRDLGIVSWKEADYDDKIEKLIDINDILFERISSSLDEAAGLKKISSEVKSLVPSIRNVPATWNKEDGFVLQESIPTFKQQQKRSSSTFAINHQQTKNIPKPQIKFTDKVDNNPHTPFIPKLRTKPNAITPL--------PIMFSQLDSRSSDTLL------LERHPEILLHPYFDEIEAFE--PNENL--LKEVKVQVPKSLDE-TKYLFVDTPDKLKTMIDHI----EIQS---------------------ELAIDLEHHSYRSY 303          
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A8H7VL00_9FUNG (HRDC domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VL00_9FUNG)

HSP 1 Score: 85.1 bits (209), Expect = 7.440e-15
Identity = 74/277 (26.71%), Postives = 119/277 (42.96%), Query Frame = 1
Query:   49 EFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDP-EVFQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTVASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTL------GMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
            +F    + CG ++L+     +     +  + +    D  D  + F  + DV+++L+E  D  LDE +G+   + V  ++ Q   VA  ++G   K    + +  NI +PQ  F + +DNS  TPF+ +++TK +A+ PL      +  +        G+T     TM +   G      PHPYE EI    Y   +      E +  EP    EAT A +VD  E L+ M+  +                             EIAIDLEHH++R F
Sbjct:   46 QFAKDLDTCGSRILKASNQLLQQCSADTGVQVNNYEDIDDVNDRFGSVVDVIDSLIEKADVCLDEMTGQKGRKNVQQIKQQPTEVAQVSKG---KLEYKLLHASNIIRPQMKFKDPVDNSNNTPFIRKIKTKPHAMVPLSYGMQRNFMSWRKKKMGKGIT---PKTMEEVEEGKATHSLPHPYEYEIEHITYP--EFMFQEKEPIMYEPF---EATTAAWVDDDESLEKMMDELAK-------------------------VQEIAIDLEHHNYRSF 286          
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: A0A816LTF3_9BILA (Hypothetical protein n=13 Tax=Rotaria TaxID=231623 RepID=A0A816LTF3_9BILA)

HSP 1 Score: 83.2 bits (204), Expect = 3.460e-14
Identity = 80/306 (26.14%), Postives = 127/306 (41.50%), Query Frame = 1
Query:    7 LSGRQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEASG-KGANQQVALMRHQLRTVASA-------------------ARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLD--LAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHHSFRFF 858
            LS   D+ +  +F   R R +   ++VL+ +   +       +LG+    +A   +  + + D+ + L E + S LDEA+G K  + +V  +   +R VA+                     +   + ++       NIPKPQ  F +++DN+ + PF+P+LRTK NA+ PL   L      P  + + D   + +             HPY  EI AF   P        E+ P  P S DE T   +VDT + L  M  HI                            +E+AIDLEHHS+R +
Sbjct:   40 LSRSSDHDFLMSFAPLRRRMDTIAEKVLQNMHSLLQQQNLSRDLGIISWKEADRDDKIEKLIDINDILFERISSSLDEAAGLKKNSSEVKALIPSIRNVAATWNREVGFILQENIPSFKQQNKRNSSTFSINHQQTKNIPKPQLKFTDKVDNNPQIPFIPKLRTKPNAIAPLAMMLLQFDARPFDMLLLDRHPEVLQ------------HPYFEEIEAF--QPNDNL--LKEVTPQLPKSLDE-TKYLYVDTPDKLKTMNDHIENQ-------------------------SELAIDLEHHSYRSY 303          
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Match: V5FU90_BYSSN (Exosome component 3'-5' exonuclease n=1 Tax=Byssochlamys spectabilis (strain No. 5 / NBRC 109023) TaxID=1356009 RepID=V5FU90_BYSSN)

HSP 1 Score: 82.4 bits (202), Expect = 6.130e-14
Identity = 72/224 (32.14%), Postives = 98/224 (43.75%), Query Frame = 1
Query:  178 FQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTVASAARGGPAKYASMVANV--VNIPKPQAGFMNEIDNSRETPFVPRLRTKHNAVTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFHYMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLDSAGSGSDXXXXXXDGRARGGCTEIAIDLEHH 843
            ++G+ DV++TLLE  D+ LDE +G    ++++  + Q    A   R  P +    + +     IPKPQ  F    DN+   PF P LRTK +A+ PL+                 E      +G G    Y +PYE EIRA  Y P   T       PP      E+T ATFVDT EGL AM++ +   +                         EIAIDLEHH
Sbjct:   86 WRGVVDVIDTLLEKADACLDEFTG--VIKKLSPSQQQQEGNAPPKRKDPTQKFPTIYDYGPSKIPKPQLQFDRTPDNTDVAPFRPLLRTKPHAIVPLE-----------------ESLQLIDSGKG----YKNPYETEIRASKYPPSTYTSS-----PPIEYLPFESTTATFVDTLEGLKAMLEELKSAK-------------------------EIAIDLEHH 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9174.16983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQE8_ECTSI4.440e-11871.10HRDC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S3UZH7_9STRA1.120e-1731.40Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A1Y1ZAM6_9FUNG1.900e-1730.57HRDC domain-containing protein n=1 Tax=Basidiobolu... [more]
A0A8H7PG65_MORIS6.320e-1732.13HRDC domain-containing protein n=1 Tax=Mortierella... [more]
A0A815ZIX0_ADIRI5.240e-1626.86Hypothetical protein n=3 Tax=Adineta ricciae TaxID... [more]
A0A8H7PPR4_9FUNG1.270e-1531.11HRDC domain-containing protein n=1 Tax=Umbelopsis ... [more]
A0A817VGA2_9BILA1.750e-1528.25Hypothetical protein n=13 Tax=unclassified Rotaria... [more]
A0A8H7VL00_9FUNG7.440e-1526.71HRDC domain-containing protein n=1 Tax=Mucor circi... [more]
A0A816LTF3_9BILA3.460e-1426.14Hypothetical protein n=13 Tax=Rotaria TaxID=231623... [more]
V5FU90_BYSSN6.130e-1432.14Exosome component 3'-5' exonuclease n=1 Tax=Byssoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9174contigH-paniculata_contig9174:424..6122 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.4
Seed ortholog evalue1.5e-102
Seed eggNOG ortholog2880.D8LQE8
KEGG rclassRC02795
KEGG koko:K02335,ko:K12591,ko:K12951,ko:K17680
KEGG TC3.A.3
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03018,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03018,map03030,map03410,map03420,map03440
Hectar predicted targeting categoryother localisation
GOsGO:0000175,GO:0000178,GO:0000460,GO:0000785,GO:0000956,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007549,GO:0008150,GO:0008152,GO:0008298,GO:0008334,GO:0008408,GO:0008409,GO:0009048,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010639,GO:0016070,GO:0016071,GO:0016072,GO:0016075,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022613,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032204,GO:0032205,GO:0032210,GO:0032211,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033554,GO:0034061,GO:0034470,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0034661,GO:0035327,GO:0040029,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043633,GO:0043634,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045934,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051179,GO:0051641,GO:0051716,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071030,GO:0071033,GO:0071034,GO:0071035,GO:0071043,GO:0071044,GO:0071046,GO:0071048,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1904356,GO:1904357,GO:1904872,GO:1905354,GO:2000112,GO:2000113,GO:2000278,GO:2000279,GO:2001251
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsCOG0349@1,KOG2206@2759
EC2.7.7.7,3.6.4.12
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019,ko03029,ko03032,ko03400
Exons5
Model size858
Cds size858
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9174.16983.1prot_H-paniculata_contig9174.16983.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9174 424..6122 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931142.7272255-CDS-H-paniculata_contig9174:423..6621622931142.7272255-CDS-H-paniculata_contig9174:423..662Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9174 424..662 -
1691481610.0480158-CDS-H-paniculata_contig9174:423..6621691481610.0480158-CDS-H-paniculata_contig9174:423..662Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9174 424..662 -
1622931142.7456834-CDS-H-paniculata_contig9174:1498..16431622931142.7456834-CDS-H-paniculata_contig9174:1498..1643Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9174 1499..1643 -
1691481610.0633426-CDS-H-paniculata_contig9174:1498..16431691481610.0633426-CDS-H-paniculata_contig9174:1498..1643Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9174 1499..1643 -
1622931142.7628176-CDS-H-paniculata_contig9174:2143..23501622931142.7628176-CDS-H-paniculata_contig9174:2143..2350Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9174 2144..2350 -
1691481610.072553-CDS-H-paniculata_contig9174:2143..23501691481610.072553-CDS-H-paniculata_contig9174:2143..2350Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9174 2144..2350 -
1622931142.7774863-CDS-H-paniculata_contig9174:5383..54671622931142.7774863-CDS-H-paniculata_contig9174:5383..5467Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9174 5384..5467 -
1691481610.080659-CDS-H-paniculata_contig9174:5383..54671691481610.080659-CDS-H-paniculata_contig9174:5383..5467Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9174 5384..5467 -
1622931142.8018172-CDS-H-paniculata_contig9174:5939..61221622931142.8018172-CDS-H-paniculata_contig9174:5939..6122Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9174 5940..6122 -
1691481610.0930994-CDS-H-paniculata_contig9174:5939..61221691481610.0930994-CDS-H-paniculata_contig9174:5939..6122Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9174 5940..6122 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9174.16983.1

>prot_H-paniculata_contig9174.16983.1 ID=prot_H-paniculata_contig9174.16983.1|Name=mRNA_H-paniculata_contig9174.16983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp
PSLSGRQDYAYNATFPEFRARAEGCGKQVLEVIQIFVNHVQQEGELGLPE
VGDAGDPEVFQGIADVVETLLEDVDSYLDEASGKGANQQVALMRHQLRTV
ASAARGGPAKYASMVANVVNIPKPQAGFMNEIDNSRETPFVPRLRTKHNA
VTPLDLAPISDLPTTLGMTDDREDTMADSTGGGLDFHYPHPYEVEIRAFH
YMPGQATPDASELLPPEPLSGDEATPATFVDTAEGLDAMIQHILGDRRLD
SAGSGSDDDDGDDDGRARGGCTEIAIDLEHHSFRFF
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mRNA from alignment at H-paniculata_contig9174:424..6122-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9174.16983.1 ID=mRNA_H-paniculata_contig9174.16983.1|Name=mRNA_H-paniculata_contig9174.16983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5699bp|location=Sequence derived from alignment at H-paniculata_contig9174:424..6122- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCTCCCTCTCCGGCCGTCAGGACTACGCGTACAACGCCACTTTTCCTGA GTTTAGGGCAAGGGCGGAGGGGTGCGGAAAGCAAGTGCTGGAGGTGATCC AGATTTTTGTGAACCATGTACAGCAGGAGGGGGAGCTTGGGCTGCCGGAA GTTGGAGACGCTGGTGATCCAGAGGTCTTTCAGGTGTGTTTCATTTCGTT TGTTTTTTTTGTTTTTTTTCTTGTATTTAAGTTGCCACCTACGTATATTC ATTACTATGTTGTAGTGGTAGTAGTAGTCGTATTCACACATGAGCCCAAT CCTTTAAACCCTTGGATGAATCGATGAAACTGCAATAAAACGGTTGGAGC CCTCGAAAACAGAAAAAAATTGTATATATATAATGAAAAGATGAAAAATG TGAAATCTAAGCAAAAAAAAATGATAACTTTTTATAGTGGATCATAAAGA CGAGGGATTTTTTTTTTTTCCAAGACTCCAAAAATATGAAAAAAAACAAA ACAAAAAAAAACACGATGAAAGGAGGAGGCTGAGGAGATTGGTTTGCTTT TTTTTTTTTCTCTCGTTCTTTTCACAGTCAATTGACAGCGCTAACTGCAT GCTTTTCTTTGTTGTTTTGTCGGCGCGGTGGATTGTCGTCTCTTGGTGTT GACAGGGTATAGCGGATGTGGTGGAGACCCTGCTGGAGGATGTCGATTCT TACCTGGATGAGGCGTCCGGGAAAGGCGCCAATCAGCAGGTACAAAAATG TACTGGTGGGGAGCGGGGGGGGGGGGCAAGTCAGTAGTCCCACTCGCTCG TGAAGGTTGGAATGGCGGCGGTATCTTCTTCCGAGTATTGTTTTCCGTTC TGTACATGGGCAATGCTGCCGCGTAGTACCTTTTGTCGAAAGTGTGCATC CCCCCGGATAAATACGAATACTTGCAAATGATTTTCACAAAAATCTGAAG GTATCTGTCTGAGTTTTAGAATAAGCTGGTGTGTTTCATATGCCTTTCCC GGACCATCCACGACTGCTAATAATACTCGTAAATCGAATGAACAGGGGTG GGTGCTTTATTCCATGTGTCAGCTCATTCTGAGACTCAGGCGAATACTGT CACTTTTTGGTGAAAAGTCATTTGCAAGTATTCGCATTTGTCCAGGAGGT GAGAAGGTGTACGATTACTCGCGTTCTGTTCGGAAGATCTCAAATGTTGC GTGGTCATCAGTTCTCGTCCGCCCTATCGGCACGGCCCTCAATTATTTGT CAGGTCTCTTGGCACGATCCCAATTGGACACACGGTGATATCATTGTAGA GGATTTTGATGCGAGTAACCGAAGCAGATATGATGACTGTTTTTGACCGT TGCCATGGCCTCCCCTCCTGTGTTGGCCGTGCTCGATGCCTCGTGGCTTC GACGGGTTTGGGCTTGTAAGTCGAGCGTAAAGACAAAAGGTTTGGAGCTT TTATTAGGGTGACAGAATGGGTAGGGGGGGGGAGGGGCATTGGCTCACTT AGTCCTTGCCCTCAACCAGTCCGTATCAAGAAACAGATTCTACGTAGATT CGAGCCGGATTCATGTCAAGAAATAAGAATCAGAGCAAAAAACCTCCGAG AATACAATCTATATCACGCGCATATTCAGGCTGAATCATAGGATCTAGAT GAGAAAAAACCACATAACATGCGTACAATTGGACAGGTCGTTGGTGGAAG GGGTTGATGACACATGCAGCTTGGCGGTATAACCTCAGCATAGCATGACT ATACCTGTATTTTGTGACGGAAAATTCTCATGGAAATGAAACATATGAAT GTCTTGTTGGGGTTCTGTTGGCACGTGTCACTGATAATGGCTGCGTTTTT ATTATCGTAATCCAGGACTGGAGTGTTCGCGTGTACAGCCAACAGTAAGC TCCTCGTTTCGGACCCCAGTCCCCGCCTATGCCGACGTCTCGTTACACGA TGAATTCCGTTTTGACAATCAGTGACAATTGGTGTCTCTCATGGAATATA TGACTTTTGAAAAGGAACTACCTTCCGTAACGAGGCGTTTGTGTGGGTGA ACGGGGGTCTGGAGGGTGTCGGCGACGAGCAGTTCACTGTCAGCAACATG CAAAGAGAAGCCGAAATTTACAGAACAAATTCGTTTTAGGCAAACACTCT TTCTGGTGTGAACGCTACTGCCTAGACGTGAGAGTGAAAGCCTACAGCAA AGCAACCAATTTACCGCTGGAATTAGCGGGTTCGGCATACATGTCCCTGG CGACAATACCTATCGAAACTCTGCAGTCGTTGTGGACATGGCCATGCCTG CCACCTACCACCAGTCTATTCTGTATGTACTAGGTACTACTGTTTGTGCT GGACTGTCTGTCTGAACACCGACGGCCGAGGCTCTCTATCCCCATACCCA TGTCATTGGGTGTCATATTTCCCAGTTGTTGAGGTATGGCTTAAATGGGG ATAAGATAGAAACAGACGTCAACTACGGTACAAGGCTTCAACTTGGCTGT CGTATACGCTTTTATCTTTGGCTTTTTATCTACCGGAGTCTCGCTAAGTG CGCCGACCTCCCTTCCCCCCCTCTGATCTTTGGTGTTTGAAATGGAGTGA ATAATATAAACGATTATAATCGATTCCTTTTCGGACAAGAACGGTGATGG AAACATGAATTTGGAACAACGCTTCAAGCACCCCCAAGACAAGCAAGAAT TCCCTTTGGGAAGGGGCGTATATCCCTCCTTGGCACCTTGCCCGACCACT TCAAACATTTTCAGCCAAAAAGCGTCCTTCCTTCTGTCTTTGTTGTTGTC ATAAGTGCGGGCCTGATCATACGGGTGTCTCTTGAACCGTGTCTGTTCGT ATACCGACCGGTTAAAAGACCATTCGACGAAATGCCCTTGAATTTCAACC TTTTTAGTCCAACCAAAGACCGATTTTGTCGGATTTCTTGGCCGTTTGAA CCGCAGCCATAACCGGTTTTGTCCGACAGAGATAGGCAGGAAATATGGCT GACTGCTCAACAATGAATTTACCGATACGCTGCCAGAGTGCACGAAACTG CCCGCAGCTGGTCGGAAACGGAGTACCACGTCATTCGAATTTTATTGCTA CGGAACAGTGCCAATCTATTCGCAAATAGTCGCTGTTCTGGGTTATACAT ACTTCCTCGCTCATTGATAACCCTCTCGCACGGCATGGGCATTGTACCGT GTAAATTTATCAATTGATATGCCCTCAAGGATTTGTCAAAGTGCGCATCC GCGGAAGACATGGTACCCACTATTTATACCCTCCCCCCCCCCGCTCCTGC CCCTTTTTTGACCAAGTGAACGGAAAAATAGAAAAAAAAGCTTTGAGCTA CTTTTTTCTGCGCGTGTTGCACAATCTGAAATATTTTTTGGGGGTAAAAA ATAAAATTGGAAGTAGCGGACATATATAGATACGACGGAGAAGTACGGAC GTTCTTGATTTAATTTAATTTTTTTTTGTAGACCCTCAAATCCGGTAACC TTGTTTTTGTTTAGGCTTGGGAAACGAACAAATGAAAGGACAAACTAAGA AAACAAGCACACAAACATTAAAAACAGAAGTAAGGTTGACCTAATGTGCC ATCATATATATATATTTTACCGTCAGGAGATAACGGCAAAATCTGTTCTG ATATTTCTAATGGGAATGTTTCGTCCAGCTCTCGTATGACACCGGTCCGA TTTTCGAAAATCTTGAGAAGACCCTTGAACTTGATGCCCTTGTCATTTTT TTTTTTGTTAAACACAATGAAGGTTGCGCTAATGCGTCACCAGCTGCGGA CCGTGGCGTCGGCGGCGCGCGGCGGACCGGCGAAGTACGCCTCCATGGTG GCCAACGTTGTGAACATTCCCAAGCCGCAGGCAGGCTTCATGAATGAGAT CGACAATAGCCGCGAGACACCCTTCGTCCCCAGACTGCGCACCAAGCACA ATGCTGTCACTCCGCTAGACCTAGCGCCGGTGAGGACGATTTTGGAACTG TTGTCAATATGATGCGTTGTTTTGTTTTGTTTTTTCCAGCCCCGTAAAAC ATCTATATCTCTGCAGGAGGTGCCCATAGAGGTGAGTTTGTGGATCCGCG TGATTGCTCGTCAAGGGGAATGTGGAAATTGCGGGGCGGAAGGAGGCGTT GTTGCATACGAGAGAGTCGGCCGTGGTCGTGTATCCATCCCCGTGTTCTC CGTGGGGCCTGTTGAATCGCTTAAAAATACTCCATGCCCTGGTTTCCATG AATTTTTGTGTCCATTTTCATCCGTGTTGTGTGGTGTTGTTGACGCTGTG CGTGGCTTTTTCCCTTCCAGTTTTTTTGTTTTGAGTTTTTGTTGTCGTTT TTTAAGGTGCATCTTATCTTATTTTGAACTTATTCACCCATGTTTTTTGT TCTTGCTTTTTTCTGAGGTTCTGTCCCCTCGGTTGTTTCGATGTTTTTTT GTTTTTTTTTGTTCTCGGTAAATTGCCAGATTTCTGACTTGCCAACCACC CTGGGCATGACCGACGATCGTGAGGATACCATGGCGGATAGCACCGGAGG CGGCCTAGACTTCCACTACCCTCATCCTTACGAGGTCGAGATCCGAGCGT TCCATTACATGCCCGGCCAGGCGAGTCAACTTTGATCAAATCTCTTGTGG ATTTAAGCTTACCAAAAAATCCTTGTAGTACTAGAGCCAAGAAAGGCTTA ACAAACAGTCCTTGTGCACGGAGACGTACACGCCAGAGATCGTAAGATTA GTTTCTTTTTTTTCCCACAATACTTCAGTTCGGCTTCTCAGACTCGTGGT CAGAGGCCAAAATCTCTACTCTGTTGTCTCTTGTACGCCGTGGTTTATGA ATGTCAATAGCCACAAACCAGGGGATTGGTGGTATATTGTTTGTTTCGAC ATCAGGCTTGAGACATTAGATGTATTTTTTTCAAGTCCCCGGCATGGGTC ATGGGTCCCCACCCTCTGCCTCGCGGCGAAGCAGCCGCTACATTGTCCTT CATTTGCGGCGGCCCTCAGACCCGACTCGGCGATAAGCCGTGAAAATATT CAAATATTTTCTGGCGCCAAGGTTCGCCGAGACAGCCTTTCGGGGAAGCG CCGTAGGTACTTCAGACCGCAGTACCGATAGTACGGTCTCTCCGTACAGT TGAGCGATGTGAGTTGTGAATGATCTGATCCGATTGGTCCCAACCGTGCA ATCTTTCTTAGACAGCCGTGAATCAGCGAGAAGTGGCAGATAATCGAACA ACAACCTCTTGTGGATTCAAGTTGACTAGAAATATTAAATAGTGCTCCAA AAGGTTACCAAGCAGGTGTTGTTGTATACGAGGGTGCAAAGAAGCCGTAG TATCGTGCTCTTTAGTGTTCGGTGTGGTGGTGCCTGGACGTGAAGGATTA TTTTTATCAACAACCCAAACCCACCACCCACCACCACTATCAATAAACAA CAGGTGCAAGCTCCGGATGCCTCCGAGCTCCTGCCGCCCGAGCCTCTCTC CGGGGATGAGGCCACCCCAGCCACGTTCGTGGACACTGCTGAAGGCCTGG ACGCCATGATCCAGCACATCCTAGGAGACAGGCGTCTTGATTCCGCAGGA AGCGGGAGCGATGATGATGATGGTGATGATGACGGGAGGGCTAGGGGTGG ATGCACAGAAATCGCCATTGACCTGGAGCATCACTCTTTCAGGTTTTTC
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Coding sequence (CDS) from alignment at H-paniculata_contig9174:424..6122-

>mRNA_H-paniculata_contig9174.16983.1 ID=mRNA_H-paniculata_contig9174.16983.1|Name=mRNA_H-paniculata_contig9174.16983.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1716bp|location=Sequence derived from alignment at H-paniculata_contig9174:424..6122- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCTCCCTCTCCGGCCGTCAGGACTACGCGTACAACGCCACTTTTCCTGA
GTTTAGGGCAAGGGCGGAGGGGTGCGGAAAGCAAGTGCTGGAGGTGATCC
AGATTTTTGTGAACCATGTACAGCAGGAGGGGGAGCTTGGGCTGCCGGAA
GTTGGAGACGCTGGTGATCCAGAGGTCTTTCAGCCCTCCCTCTCCGGCCG
TCAGGACTACGCGTACAACGCCACTTTTCCTGAGTTTAGGGCAAGGGCGG
AGGGGTGCGGAAAGCAAGTGCTGGAGGTGATCCAGATTTTTGTGAACCAT
GTACAGCAGGAGGGGGAGCTTGGGCTGCCGGAAGTTGGAGACGCTGGTGA
TCCAGAGGTCTTTCAGGGTATAGCGGATGTGGTGGAGACCCTGCTGGAGG
ATGTCGATTCTTACCTGGATGAGGCGTCCGGGAAAGGCGCCAATCAGCAG
GGTATAGCGGATGTGGTGGAGACCCTGCTGGAGGATGTCGATTCTTACCT
GGATGAGGCGTCCGGGAAAGGCGCCAATCAGCAGGTTGCGCTAATGCGTC
ACCAGCTGCGGACCGTGGCGTCGGCGGCGCGCGGCGGACCGGCGAAGTAC
GCCTCCATGGTGGCCAACGTTGTGAACATTCCCAAGCCGCAGGCAGGCTT
CATGAATGAGATCGACAATAGCCGCGAGACACCCTTCGTCCCCAGACTGC
GCACCAAGCACAATGCTGTCACTCCGCTAGACCTAGCGCCGGTTGCGCTA
ATGCGTCACCAGCTGCGGACCGTGGCGTCGGCGGCGCGCGGCGGACCGGC
GAAGTACGCCTCCATGGTGGCCAACGTTGTGAACATTCCCAAGCCGCAGG
CAGGCTTCATGAATGAGATCGACAATAGCCGCGAGACACCCTTCGTCCCC
AGACTGCGCACCAAGCACAATGCTGTCACTCCGCTAGACCTAGCGCCGAT
TTCTGACTTGCCAACCACCCTGGGCATGACCGACGATCGTGAGGATACCA
TGGCGGATAGCACCGGAGGCGGCCTAGACTTCCACTACCCTCATCCTTAC
GAGGTCGAGATCCGAGCGTTCCATTACATGCCCGGCCAGGCGAATTTCTG
ACTTGCCAACCACCCTGGGCATGACCGACGATCGTGAGGATACCATGGCG
GATAGCACCGGAGGCGGCCTAGACTTCCACTACCCTCATCCTTACGAGGT
CGAGATCCGAGCGTTCCATTACATGCCCGGCCAGGCGACTCCGGATGCCT
CCGAGCTCCTGCCGCCCGAGCCTCTCTCCGGGGATGAGGCCACCCCAGCC
ACGTTCGTGGACACTGCTGAAGGCCTGGACGCCATGATCCAGCACATCCT
AGGAGACAGGCGTCTTGATTCCGCAGGAAGCGGGAGCGATGATGATGATG
GTGATGATGACGGGAGGGCTAGGGGTGGATGCACAGAAATCGCCATTGAC
CTGGAGCATCACTCTTTCAGGTTTTTCCTCCGGATGCCTCCGAGCTCCTG
CCGCCCGAGCCTCTCTCCGGGGATGAGGCCACCCCAGCCACGTTCGTGGA
CACTGCTGAAGGCCTGGACGCCATGATCCAGCACATCCTAGGAGACAGGC
GTCTTGATTCCGCAGGAAGCGGGAGCGATGATGATGATGGTGATGATGAC
GGGAGGGCTAGGGGTGGATGCACAGAAATCGCCATTGACCTGGAGCATCA
CTCTTTCAGGTTTTTC
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