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Homology
BLAST of mRNA_H-paniculata_contig9157.16970.1 vs. uniprot
Match: D8LQZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ7_ECTSI) HSP 1 Score: 179 bits (454), Expect = 5.310e-51 Identity = 92/123 (74.80%), Postives = 105/123 (85.37%), Query Frame = 1
Query: 247 PLSPWEIELAKAAGTWKGPEGVHDEKQRCRQWCQIAKASLQSEERERETDRQNEESGKPVGSKGRRLRLRQLVDAAELNTSFFLVPGLNDKQVIKIQRLVYQVETALSRLDSARARPPPVASF 615
PLSPWE+ELAKAAGTW+G GV DEK+RCRQWC IAKASLQ+EE+ERE D + E GK G R RLRQLVDAAELN+SFFLVPGLNDKQV+++QRLVY+VETA S L++ARARPPPVASF
Sbjct: 87 PLSPWEMELAKAAGTWEGTGGVGDEKERCRQWCMIAKASLQAEEKEREKDNRRGE-GKLTGGTARHQRLRQLVDAAELNSSFFLVPGLNDKQVLRVQRLVYKVETAFSSLEAARARPPPVASF 208
BLAST of mRNA_H-paniculata_contig9157.16970.1 vs. uniprot
Match: A0A6H5L231_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L231_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 1.140e-16 Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 247 PLSPWEIELAKAAGTWKGPEGVHDEKQRCRQWCQIAKASLQSEERERETDRQNEE 411
PLSPWE+ELAKAAGTW+GP GV DEK+RCRQWC IAKASLQ+EE+ERE D++ E
Sbjct: 555 PLSPWEMELAKAAGTWEGPGGVGDEKERCRQWCMIAKASLQAEEKEREKDKRRGE 609
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-07_002240.1 |
| Exons | 5 |
| Model size | 873 |
| Cds size | 846 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9157.16970.1 >prot_H-paniculata_contig9157.16970.1 ID=prot_H-paniculata_contig9157.16970.1|Name=mRNA_H-paniculata_contig9157.16970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp
MFPGAGLGSPTDGAPGPGTGEGVIGGSEVAGASFPPPPPPPPPPPPPPPP
VVTVVTVPPVEPVESPAPVVPEVPLSPWEIELAKAAGTWKGPEGVHDEKQ
RCRQWCQIAKASLQSEERERETDRQNEESGKPVGSKGRRLRLRQLVDAAE
LNTSFFLVPGLNDKQVIKIQRLVYQVETALSRLDSARARPPPVASFNQVT
TTGSSTPSRSNATSSSDAPSSDGANKASPNSSYSTSRGGQHNPGTGTKRA
RSRASDGGDDGSDLDALVNGGGGAGRKRAVGG back to topmRNA from alignment at H-paniculata_contig9157:1737..7432- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig9157.16970.1 ID=mRNA_H-paniculata_contig9157.16970.1|Name=mRNA_H-paniculata_contig9157.16970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5696bp|location=Sequence derived from alignment at H-paniculata_contig9157:1737..7432- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCCCTCCGCCCCCACCCCCACCCCCGATGTTCCCCGGAGCAGGGCTGGG
GAGTCCTACGGACGGTGCTCCTGGTCCGGGGACCGGTTCCGGGGCCAGTT
CGTGGATGGTTCCGGGAAATGGTGCTGCTAGCAGCGGATCTGGGGGCGAT
GGGATGAAGACGAATGTTGTAGCGGCGGGTGAAGGCGAAGGGGTTATAGG
AGGGAGTGAGGTTGCGGGTGCTTCGTTCCCGCCGCCGCCGCCGCCGCCCC
CACCGCCACCTCCGCCGCCTCCTCCGGTGGTGACGGTAGTGACCGTGCCG
CCAGTGGAGCCGGTGGAGTCGCCGGCTCCTGTGGTGCCGGAAGTGCCGTT
GTCCCCGTGGGAGATTGAGCTGGCGAAAGCTGCAGGAACATGGAAGGGAC
CGGAGGGCGTACACGACGAGAAACAGCGGTGCGTGTTTTTGTTTCACGTT
TTAAGCCTTACCTTACCTCTAATAATTATACCTTTTCTATATATTGTCTA
TAACCTTTTTTGGACTCTTGGCTGACTGTTTTCACTTGTAAGCGTGCGGT
CCTAGTTTTCAGGCAGAGGACGTGACGCCTTGGCTGAATCAAAGGTTGGG
TGTTAGACGGGTATGTGTCGAGCCGTACCGGGCTGCCTTACATTCCGATC
GATCTCATTCAGATTACGTTATTACATAGGGATTACACAGGGATCGTGCA
GCGCCCATTTGTATATAAGCTTTTTGGTCACACCCGGTTTCACGGGATTT
GGTCTCGATATGGTATAGTAATTGACAACGAAAAGGAAAGAAACATAGTA
TAGGTCTAGGCTTCTTTCTATGCTTTTTCCATTGGGGTGTAGTGCTCTCG
AAGGTTGGGATGATCGACCCTCTTGAGGTGTTGCATCATGCTTCCAGGGA
GTAATGGGCAAAACGTGGAGGACCCTGCACAAACCACATGTCGCGACACC
TATGAAAACAGGGAGAGGGAAAAAAATATTGCATGGCCACCTCACCACCG
CGCATAGCAACGTACAGAGAAAAGAGGCGGGGTCGTTGATGTTGCTCTAT
TTATGCGCGCTCAGCAGACCTGCCCTTGCTGTCTTCAACCGATGGTTGAT
AACAGAGTACATGCAACTGGTACATACACGTTGACTTAGCGAGAATTCTG
CATGAGAGGAAAGCAAGGGAATGGCGAGTCTTTGGGGGGATTGTGTCTTG
GAGTGTTGCTGTTTCACGTTGCATGCACGCGAATGATTCACTCGTACTCC
CTGTAGACTGCAGTTGGCCGATGGTTGGTTGTCCTTTTTTTGGTAGCCCG
GGTGAAGATCTGAGAGGAAGTCGGTCTCTTTTGCGGCGGATGGATTTAAC
ATGATGTCTTGCAACATGATTGTCCCCTTTGATTAGTATTGTAATCGTTT
TTTATCGTGCACATGCATTTGTGCATGTAGAAAAATGATTGTTGTATACC
CTATTTCAACTCTCCCCCTTCACGTCCACACACAGAGAGATATTAATGAC
GGGATTAGGAACAGTCGAAGGATGCATTAGAGAACCATTTGGATCCTGGG
ATTGCGAAAAGAAGGCTATGTATATGGTTCGAGATAGGAGACAGAAATTG
CCCTGGACACCTGAAGATTAAAATAATGAGGTGGATGAAACATTGCTTAG
TTACAGTGGCAACGTAGGAAAGAGCGATTGGTCATTATCCATCGAAAGTC
GCTCTTATACGGACAAAGCCCCGTCCTCCTGAGGACGCGTTGTCAATGGT
CTCACGACGGCATGCAAAATATTAATGTGCCTCCCTTCACCTCCCCTCCC
GCACACATACACACAAACACATACATCCACCTCCCGTGCCGCTGTCAGGT
GTCGACAATGGTGCCAGATTGCTAAGGCTTCCCTGCAGTCGGAAGAGAGA
GAACGTGAGACAGACAGACAAAATGAAGAAAGCGGCAAGCCGGTGGGAAG
CAAAGGGCGGAGGCTAAGATTAAGGCAACTCGTGGACGCCGCCGAGCTGA
ACACTTCGTTTTTCCTGGTACCCGGGCTGAACGACAAGCAGGTGCAACGA
CCTTGGTCTTTTCGTGTGATTCCTTTTTTTTTTCTTGGATCAAATTTAGT
TTGGCCCGAAGTTGACAATTCCCATTGGTGATTTTGCTTGGACCCCCTCG
TACATTTTCATCGTCTACTGCCGCATATTGCCAGGCGTATTCGATCACCG
TGGTCGAGTCTTGTATTCTATGCCACACCTCAACGGATATGTCGTGACTC
GTGACTAAAAAAACAAAGTTGTCGAACTGGAGAGAAGAAATAATACATGA
GAGAAGTACCTGCGGATGGGACAACGATGTGTATCAGAGTATTCTGCCGT
CATGTCCGGTGTCGACGAGTGAGTGAGATGGCTGACCCCACCTCGCGATA
GTAACAGGCAAGTACCCAGTTGAACGGAAGACTGCGCCTCCGATCGACTG
GCAGACTAATAGGTCGAAAATAAAGAGAACATATGGAAGCAACTAAAATA
AAATGAGAGGAATTTTACGTATGAATGCCCTTCACTGCTGCAGAGTGACA
CAGCATTGATCGGATGCCATGTTTGAGATCTACAAGGAGAAAGTGACACG
AATTTTTACATAGGCCTTGTCTGTGGAAGGGATCACACTTTTGTTCCGAG
GCCATCAGCCAAAAAAGAGAATTCGGCGAAAAAATTGGATTAAAACCGTG
AAAAACGGTATTCAGAGGTCTTAAATTCGAGACTAGAAAATATGTGAAAA
ATCTGGATTTTCACCAATAACTCGAGATGAACGAAAAAACAATTTTTTCA
ACGTGACCACATCGGCAGAAGTGACCGCGGTCATGTACGAAAAGTTTGGT
TATAAAATAATATAATTCTAGCGAGTTATCGTGCCATGAAGATATGCGTG
GAGTATGACCAATTTTATGCGGTATACTTGTATGGTAAACTGTGTTTTTG
CCCATTTCCTGGCCATTTCCGCTTCGCGCATGATTCTTTTTTTATAGTAT
TCGGACAAAAAATGCAGATGAAATACATTTTGTCAGCTGCCGTTTCAACT
GGGGAACCCCCACGTTAACAACATCGGGAAGATACAAAATACAAAATGGG
GCAGTGTTGAGAAATTGTTGGGAGATTATGGTAAGGCATAACAGAGAGAG
AGTTAGAACCAATCCAAAATGAAGACCGCAGTTGCACTTGGAATGACTGT
GTTGTCGGCACCTCGAAAAGGTTTTGCGCGCTCTCCTGTACGCAAAACCA
AAATCGATGTTTCAGGTTGTTTTTAGTCGTTGATTTATTATGTCAAACAT
ATCGACGTGCCCAAGCAGACGCTGCCACGTAAAAATAGTGGCTCACAGTT
ACAGACAGTTAGCTGCTAGCCACCTACTGTACTGTAGGACAAACATAAAC
AAGTCCTTGCTCCCGTGTACTTTAGCTGGGAAAATCTAACCCTAGTGCCT
ATTTACTCATCATTTTCGCCCTCGCATTCGTCTCTCGCCAAAATGTCGGC
CTCGAACCCGGTGAGTTCATGGCCTAACCCTCCCTCCCCCTCCTTATCCC
AATCTTCGCCACAAACACTACCTTGATTTCACCGCTTTACGAAGAAAAAC
GTATCCTCCGCCTTGGATTCGAGGTGACCCCTATCTATCGACCCCCAGTT
CTTCACCGCCACAGCAGATACACCAAAACCCTAACGTGATCAAATCTGCT
GTCAAGAGGAACACCTTTGCGCTGGTTTCACCTTCGTAGCTGTACTCTGG
CCGTGGAGCGCGTTTGAAGTGATGTACTGTATTTTTGGGGCGATCTGGGC
GAATTCATACTTCCCTATCTTGACAGCAGCTTGTTGGATCTATCTTGACA
TATATACTTCATAGGTGATGGGATAATTTGTTGGGCTGTTACGCGGCGAA
AACTGTACCATGAAAAAAGCAAGTGCAAAATTCGCGGAAAAAAGCACGTT
CAAAATTTGAAGGACGTCTCTATAGCGTACTAAATACTATGTCACCCTGT
AGTATTATCGCTGTTCCGTTTTCGTTTGTTGCACTGGGCGTTCCAGTCCA
ATAACGCAGTTGCTGCTGGTGACAAACGAATGATCACCGGTGGTCCCGAA
AGCTCAGCAGCTATCCATAGTACGTACCGTTTTGTCACTTGATCCTCTTC
TGGACTACTTGACACAGGCAACGAGAAATCCGTCCAGCCATTCGTATGCC
AAGTTCTTCACCCTACGCCCGCTCTGGCAATTGTCCCTCACCAGCAATTT
TTGTTTCTGTGATACCTCTGCCCGCTGGCATTCTTGTTGTTCCGTATCCA
GGTCATTAAAATTCAACGGCTCGTGTATCAAGTGGAAACTGCGCTGTCGC
GGCTGGATTCGGCCAGAGCCCGGCCCCCACCCGTGGCTTCCTTCAACCAA
GTGACCACAACGGGCAGCAGGTATGCACATACGATTATGATCATATATAT
ATCAAAATAAGATGGAAGTAGAAAATGCCGCAAAAAGTTAAGTAAACATC
TGGCTCGTGCAGCCTTGCAAGGTAACAGGGCAAATTTTGGATATTTGGCG
CGCTTATTACCTGTTTTGGCTTTACCTGTTGTGTTGTATGGCGTAGACTT
GTAGTTGTTGGTGGCATTGCTGTGTCCTGGTTGGGTGAATGCTTTATGTT
CATAAACTTCTTGTGCCATAAGTAGAGTCGGTTGAATTTACAGACGCACG
TAATTGTCTCCATTAAATATCTATAAAACCCAAAATGTTTGGTGGGTTGA
TGCCCACAATTTTGCGGAAATTGGCGAAATTCGTCGAAAGCATGCGCGCC
CCAAAATAAATGTTGGTCGAAAAAAGTGAGATTTTGCCCCGTTTTGTATT
TTTCATCCTGGAAAAATGTGAATAATGGTAAACGTTAGCCCAAGCTTGAG
CGGTGATTAATCCTGATACACAAATTGGAATGCACTTCGGAATAGTGCGT
ATGACTATCAGATTTCTGTTTCCCAACGATTCCAACCACAGCCTCTTAAT
ATTCTTGGATCTGGAGGTATAATCTGCCACACACACACACACGACTTTAC
GAGATGACACAAAGGTATGTCAGCATGCTTTTTCATTCGGTTCTCATGTT
TTGTCAAGTTTTGTATCTGATCTGGTGGCGTCTATATCATGCAGTGGGAT
CTGCGAAGTTGCCTTGCAATTCTGGGCCTACGGGGATAGCCTTTTTGGTG
TTGTTCCTTGTATTTACTTTGTATTCATGTTTGCCTTGCGACAACTTGCA
GACTCGGATACGGCGACTGAGAAGCGGAGAAAACCCGATGACAGCTGACA
AAGGCAGAAGAATTGGCTCTAGTTGTAGGCCCAGTCAAACTGCTAGCTCT
TCAATTTGAACTGATATATGCTACAGTACTAATCATTATCATGTACGGAC
ACAATTTCAACTATGCTGGCCCCACACTTGTGACGTACCAAAATAGATCC
GCTGGGAGGAGCAGCACGCCATCGCGCAGCAATGCGACCAGCAGCAGCGA
CGCGCCGTCTTCCGACGGCGCTAACAAGGCCTCTCCTAACTCTTCATACT
CTACATCTCGCGGCGGCCAACATAACCCAGGGACCGGCACTAAACGTGCC
CGGTCTAGAGCGTCGGATGGTGGGGATGATGGCAGTGATCTAGACGCCTT
AGTTAACGGTGGGGGGGGTGCGGGCAGAAAGAGGGCGGTAGGCGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig9157:1737..7432- >mRNA_H-paniculata_contig9157.16970.1 ID=mRNA_H-paniculata_contig9157.16970.1|Name=mRNA_H-paniculata_contig9157.16970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at H-paniculata_contig9157:1737..7432- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCCCCGGAGCAGGGCTGGGGAGTCCTACGGACGGTGCTCCTGGTCC
GGGGACCGATGTTCCCCGGAGCAGGGCTGGGGAGTCCTACGGACGGTGCT
CCTGGTCCGGGGACCGGCGAAGGGGTTATAGGAGGGAGTGAGGTTGCGGG
TGCTTCGTTCCCGCCGCCGCCGCCGCCGCCCCCACCGCCACCTCCGCCGC
CTCCTCCGGTGGTGACGGTAGTGACCGTGCCGCCAGTGGAGCCGGTGGAG
TCGCCGGCTCCTGTGGTGCCGGAAGTGCCGTTGTCCCCGTGGGAGATTGA
GCTGGCGAAAGCTGCAGGAACATGGAAGGGACCGGAGGGCGTACACGACG
AGAAACAGCGGCGAAGGGGTTATAGGAGGGAGTGAGGTTGCGGGTGCTTC
GTTCCCGCCGCCGCCGCCGCCGCCCCCACCGCCACCTCCGCCGCCTCCTC
CGGTGGTGACGGTAGTGACCGTGCCGCCAGTGGAGCCGGTGGAGTCGCCG
GCTCCTGTGGTGCCGGAAGTGCCGTTGTCCCCGTGGGAGATTGAGCTGGC
GAAAGCTGCAGGAACATGGAAGGGACCGGAGGGCGTACACGACGAGAAAC
AGCGGTGTCGACAATGGTGCCAGATTGCTAAGGCTTCCCTGCAGTCGGAA
GAGAGAGAACGTGAGACAGACAGACAAAATGAAGAAAGCGGCAAGCCGGT
GGGAAGCAAAGGGCGGAGGCTAAGATTAAGGCAACTCGTGGACGCCGCCG
AGCTGAACACTTCGTTTTTCCTGGTACCCGGGCTGAACGACAAGCAGGTG
TCGACAATGGTGCCAGATTGCTAAGGCTTCCCTGCAGTCGGAAGAGAGAG
AACGTGAGACAGACAGACAAAATGAAGAAAGCGGCAAGCCGGTGGGAAGC
AAAGGGCGGAGGCTAAGATTAAGGCAACTCGTGGACGCCGCCGAGCTGAA
CACTTCGTTTTTCCTGGTACCCGGGCTGAACGACAAGCAGGTCATTAAAA
TTCAACGGCTCGTGTATCAAGTGGAAACTGCGCTGTCGCGGCTGGATTCG
GCCAGAGCCCGGCCCCCACCCGTGGCTTCCTTCAACCAAGTGACCACAAC
GGGCAGCAGGTCATTAAAATTCAACGGCTCGTGTATCAAGTGGAAACTGC
GCTGTCGCGGCTGGATTCGGCCAGAGCCCGGCCCCCACCCGTGGCTTCCT
TCAACCAAGTGACCACAACGGGCAGCAGCACGCCATCGCGCAGCAATGCG
ACCAGCAGCAGCGACGCGCCGTCTTCCGACGGCGCTAACAAGGCCTCTCC
TAACTCTTCATACTCTACATCTCGCGGCGGCCAACATAACCCAGGGACCG
GCACTAAACGTGCCCGGTCTAGAGCGTCGGATGGTGGGGATGATGGCAGT
GATCTAGACGCCTTAGTTAACGGTGGGGGGGGTGCGGGCAGAAAGAGGGC
GGTAGGCGGGCACGCCATCGCGCAGCAATGCGACCAGCAGCAGCGACGCG
CCGTCTTCCGACGGCGCTAACAAGGCCTCTCCTAACTCTTCATACTCTAC
ATCTCGCGGCGGCCAACATAACCCAGGGACCGGCACTAAACGTGCCCGGT
CTAGAGCGTCGGATGGTGGGGATGATGGCAGTGATCTAGACGCCTTAGTT
AACGGTGGGGGGGGTGCGGGCAGAAAGAGGGCGGTAGGCGGG back to top
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