mRNA_H-paniculata_contig914.16961.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Match: D7FPX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX2_ECTSI) HSP 1 Score: 290 bits (743), Expect = 4.600e-87 Identity = 154/235 (65.53%), Postives = 187/235 (79.57%), Query Frame = 3
Query: 282 QPTLDEELDAIDDVYMDRLPGEGREKVKVFGAWLDADVAGRKAGRGNQAAALIARAERGEQLTKAEEAEVFYEKAIANMRAGKYDTSYSMLEKAVDLAGVDSRRGGEFKLWAVQALQGIGRNAQAVHLLKSMKNHSDRDVRKVSSELLYIAQAPVLKLNDEDFVQFPDVSHLNEGFDKTKWKELAKPSIAPYKKRQRENGG-KVGKDVGQKAGGDPMMLVACVGTILALSYVFLV 983
+P+L+E LDAIDDV+MDRLPGEGREKVK+FGAWLDADVAGRKAG+GN+AA LIAR + GE+LT E+AE+FYE+AIA MR D S ++L+KAVDLAG DSRRGGEFKLWA QALQG+ RN QAV +LKS+K+H D DVRKVS+ELLYIAQAP L LN EDFV FPD S + + +DK K+L KP IAP+KK ++E VG+D G + G DP+M +A + IL LSY+FLV
Sbjct: 60 EPSLEESLDAIDDVFMDRLPGEGREKVKIFGAWLDADVAGRKAGQGNRAAGLIARMKNGEELTDQEKAEIFYEEAIALMRRRDCDASVALLDKAVDLAGADSRRGGEFKLWAAQALQGVNRNNQAVEVLKSLKSHRDFDVRKVSAELLYIAQAPQLALNGEDFVDFPDTSGITDDYDK---KDLGKPKIAPWKKSEKEEDMFYVGEDTGVRPGNDPVMFLAAIVGILGLSYMFLV 291
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Match: A0A835ZHV4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV4_9STRA) HSP 1 Score: 191 bits (486), Expect = 5.280e-51 Identity = 112/235 (47.66%), Postives = 148/235 (62.98%), Query Frame = 3
Query: 288 TLDEELDAIDDVYMDRLPGEGREKVKVFGAWLDADVAGRKAGRGNQAAALIARAERGEQLTKAEEAEVFYEKAIANMRAGKYDTSYSMLEKAVDLAGVDSRRGGEFKLWAVQALQGIGRNAQAVHLLKSMKNHSDRDVRKVSSELLYIAQAPVLKLNDEDFVQFPD--VSHLNEGFDKTKWKELAKPSIAPYKKRQ--RENGGKVGKDVGQKAGGDPMMLVACVGTILALSYVFL 980
TL+EE D +DD+ MDR +GR++VK++GAWLDAD+AGR G N+AAAL A+A GE LT E+ EVFYE+AI M G+YDT+ +L +AV G DSRRGGEFKLW QALQG+ N AV LL+SM+ H DRDVR V+ ELLYIA AP L L D V F + +++ FD ++++EL + PYK Q + V ++ +P L V IL +S + L
Sbjct: 54 TLEEEFDELDDMVMDRPANKGRDQVKIWGAWLDADIAGRNVGSPNKAAALKAKAAAGEALTDREKGEVFYEEAIIYMGKGEYDTAQELLRRAVAFVGEDSRRGGEFKLWLAQALQGVLDNDGAVTLLRSMRTHPDRDVRTVAKELLYIATAPKLDLEAADLVTFGAGLTAGIDDAFDASRYRELKRGPKVPYKDGQLLEKKPAYVVREYQPPPEANPAFLAVAVAVILGVSALVL 288
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Match: A0A7S2V7T9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7T9_9STRA) HSP 1 Score: 172 bits (436), Expect = 4.920e-44 Identity = 88/186 (47.31%), Postives = 131/186 (70.43%), Query Frame = 3
Query: 297 EELDAIDDVYMDRLPGE-GREKVKVFGAWLDADVAGRKAGRGNQAAALIARAERGEQLTKAEEAEVFYEKAIANMRAGKYDTSYSMLEKAVDLAGVDSRRGGEFKLWAVQALQGIGRNAQAVHLLKSMKNHSDRDVRKVSSELLYIAQAPVLKLNDEDFVQFPDVSHLNEGFDKTKWKELAKPSIA 851
+ELD IDD+ M+R P + G +V+V+GAWLD+D+AGRK ++ L ++ +GEQL AE+AE+F+E+A+ M +GKYD S ++++AV+ AG DSRRGG+F+LW Q L G+ A+ LL+ +K H DRDVR V++E+LYI +AP +KL EDFV+FPD S ++E + +T W + K +A
Sbjct: 84 DELDVIDDLSMNRSPNDDGDGRVRVYGAWLDSDIAGRKVA--SKTKELRSKMNKGEQLEDAEKAEIFFEEAVGYMNSGKYDVSVKLIQRAVEYAGWDSRRGGQFELWLAQGLYAEGQIPDAIKLLRGLKVHRDRDVRTVAAEILYIYEAPRMKLRKEDFVEFPDTSLIDEKYAETVWTKGPKIQVA 267
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Match: A0A6V1UNI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UNI6_HETAK) HSP 1 Score: 160 bits (406), Expect = 5.010e-40 Identity = 88/195 (45.13%), Postives = 132/195 (67.69%), Query Frame = 3
Query: 291 LDEELDAIDDVYMDRLPGEGREKVKVFGAWLDADVAGRKAGRGNQAAALIARAERGEQLTKAEEAEVFYEKAIANMRAGKYDTSYSMLEKAVDLAGVDSRRGGEFKLWAVQALQGIGRNAQAVHLLKSMKNHSDRDVRKVSSELLYIAQAPVLKLNDEDFVQFPDVSHLNEGFDKTKWK--ELAKPSIAPYKKRQ 869
L++ELD IDD+ M R E R++VKV+GAWLDAD+AGRKAG + A +A GE+L E E+F+E+A+ M G+Y S +++E+AV AG +S RGG F+LW QA+ GR A LK++ H D ++R+V++ELLYI +AP +KL +DFV+FPD+S + E FD+ ++ E++K S + YK+++
Sbjct: 82 LEKELDLIDDITMGRSEME-RDQVKVYGAWLDADIAGRKAGDNRKIKAKLAS---GERLAPEERGEIFFEEAVKAMNRGRYAESVALIEQAVRYAGRESTRGGGFRLWLAQAVYAQGRREGAREGLKALGTHPDSNIRRVAAELLYIYEAPEIKLTKDDFVEFPDMSTITEKFDRKAFRQGEMSKGSYSNYKEKE 272
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Match: A0A7S2BT75_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BT75_9STRA) HSP 1 Score: 123 bits (309), Expect = 6.670e-28 Identity = 70/172 (40.70%), Postives = 106/172 (61.63%), Query Frame = 3
Query: 291 LDEELDAIDDVYMDRLPGEGREKVKVFGAWLDADVAGRKAGRGNQAAALIARAERGEQLTKAEEAEVFYEKAIANMRAGKYDTSYSMLEKAVDLAG-VDSRRGGEFKLWAVQALQGIGRNAQAVHLLKSMKNHSDRDVRKVSSELLYIAQAPVLKLNDEDFVQFPDVSHLNE 803
++EE+D IDD+ M+R GR+KVK++G WLDAD+ GRKAG+ NQAA L +++ AE + + M+ G+Y + + +AV L G SRRGGE LW QA+ G A A+ LLK ++ H D V KV+ E+ YI +AP L+++ ++ V+ PD+S L++
Sbjct: 13 VEEEMDRIDDLSMNRPANIGRDKVKMWGVWLDADLVGRKAGK-NQAAFLT------DEVDDDTMAERIFSVGVTQMKLGEYAAAGGLFNRAVGLVGGSSSRRGGEIALWEAQAVHANGDVAAALRLLKGLEQHMDSSVGKVAGEIRYIFEAPKLEMDPDNMVKIPDLSRLDD 177
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Match: A0A7S3ZIY9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZIY9_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.930e-21 Identity = 67/166 (40.36%), Postives = 93/166 (56.02%), Query Frame = 3
Query: 297 EELDAIDDVYMDRLPGEGREKVKVFGAWLDADVAGRKAGRGNQAAALIARAE-----RGEQLTKAEEAEVFYEKAIANMRAGKYDTSYSMLEKAVDLAGVDSRRGGEFKLWAVQALQGIGRNAQAVHLLKSMKNHSDRDVRKVSSELLYIAQAPVLKLNDEDFVQF 779
++ DA D + R P EG++ V++FGA LDA AG +A A++ E G + E+AE+FY A+ M G YD +A AGV SRRGG+ +LW QAL GR A+ LL ++K H DRDV KVS EL++I +AP L+L++ V F
Sbjct: 30 QQQDADDKLPEMRAPEEGKQ-VRMFGAKLDAGFAGTRASNPKVIRAVLKAYEDKRDTEGSYASNDEQAEIFYASAVEKMNKGFYDXXXXXXXRASYFAGVASRRGGQMQLWLGQALYAAGRRGDALKLLLALKAHPDRDVAKVSKELVFILKAPELQLDESSRVGF 194
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Match: A0A7S0TAG8_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAG8_9STRA) HSP 1 Score: 101 bits (252), Expect = 6.410e-20 Identity = 61/158 (38.61%), Postives = 87/158 (55.06%), Query Frame = 3
Query: 333 RLPGEGREKVKVFGAWLDADVAG-RKAGRGNQAAALIARAERGEQLTKAEEAEVFYEKAIANMRAGKYDTSYSMLEKAVDLAGVDSRRGGEFKLWAVQALQGIGRNAQAVHLLKSMKNHSDRDVRKVSSELLYIAQAPVLKLNDEDFVQFPDVSHLNE 803
R P E ++V++FGA LDA +AG R R A L E ++ ++AE+FY +A+ M YD + +L +A A SRRGG+ +LW QAL R Q V LL + H DRDVR VS EL++I +AP L LN ++ D+ + N+
Sbjct: 58 RFP-ENEKQVRMFGAKLDASMAGVRAVSRSAILAVLADEEEDSAGVSTEQKAEIFYAEAVERMNRADYDRAVELLNRATSFARPTSRRGGQMQLWLAQALYAANRRPQCVRLLTVLAKHPDRDVRTVSKELMFIVKAPALVLNSSSYMTI-DLDNFND 213
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Match: A0A2V3J3V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V9_9FLOR) HSP 1 Score: 96.7 bits (239), Expect = 4.630e-18 Identity = 64/180 (35.56%), Postives = 97/180 (53.89%), Query Frame = 3
Query: 288 TLDEELDAIDDVYMDRLPGEGREKVKVFGAWLDADVAGRKAGRG----NQAAALIARAERGEQLTK-----AEEA----EVFYEKAIANMRAGKYDTSYSMLEKAVDLAGVDSRRGGEFKLWAVQALQGIGRNAQAVHLLKSMKNHSDRDVRKVSSELLYIAQAPVLKLNDEDFVQFPDV 788
+L +++D +DD+ DR P + VK+FGAWLD +AGRKA + ++A + +A+ Q K AEEA + K + G Y S ++ +A + G SR GG+++LW Q+L G A LL+S++ H+D DVRKVS EL +I AP L+L F + P +
Sbjct: 54 SLPDDIDQMDDILFDRAPNNVNQ-VKLFGAWLDDALAGRKARKNLTPTDKAVSGSDQADASVQSHKKASVSAEEAVEHSSAIFAKGMTMFNKGFYRQSTALFSEAAGIVGHGSRLGGQYQLWHAQSLDAAGDKRNAASLLESLRMHADPDVRKVSRELHFIITAPALELAPGTFFEVPSI 232
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Match: M1VAQ1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VAQ1_CYAM1) HSP 1 Score: 94.0 bits (232), Expect = 9.470e-17 Identity = 69/193 (35.75%), Postives = 102/193 (52.85%), Query Frame = 3
Query: 294 DEELDAIDDVYMDRLPGEGREKVKVFGAWLDADVAGRKAGRGNQAAALIARAERGEQLTKAEEAEVFYEKAIANMRAGKYDTSYSMLEKAVDLAGVDSRRGGEFKLWAVQALQGIGRNAQAVHLLKSMKNHSDRDVRKVSSELLYIAQAPVLKLNDEDFVQFPDVSHLNEGFDKTKWKELAKPSIAPYKKRQR 872
D+E D DD+ D ++ +VFGAWLD V + R Q+AA+ A + T E AE + + + + G Y T+ + +A L G +R GGE+ LW QAL G+NA+A +L+ ++ H DRDVR+V+ LL+I QAP L+L E FV+ + LN+ + I +KKRQR
Sbjct: 118 DDEDDGYDDISSDSDVDPVLDRGRVFGAWLDNQVL--RLDR-IQSAAMQAPGQ-----TLQERAERAFARGVQALTDGHYATASDAIFQASALPGQQTRLGGEYLLWLAQALDAQGKNARAQEVLRRLQYHKDRDVRQVAESLLFILQAPRLRLGPESFVKIDLDALLNQNRAR---------DIPGWKKRQR 293
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Match: A0A7S0NBT2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NBT2_9EUKA) HSP 1 Score: 88.2 bits (217), Expect = 4.060e-15 Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 3
Query: 357 KVKVFGAWLDADVAGRKAGRGNQAAALIARAERGEQLTKAEEAEVFYEKAIANMRAGKYDTSYSMLEKAVDL--AGVDSRRGGEFKLWAVQALQGIGRNAQAVHLLKSMKNHSDRDVRKVSSELLYIAQAPVLKLNDEDFVQ 776
KV+V GA LDADVAG +A L A+ EE E ++ + MR G+Y + + +A+ G+ SR+GGE+ +W QAL G+ +A LLKS + H D DVR V+ +LYI QAP LKL +E+F++
Sbjct: 115 KVRVMGAKLDADVAGTQA--------LDAK-------FATEEHERLFQAGVKGMRKGEYRAATTAFTQAIAAYPGGMTSRKGGEYAVWLAQALHARGQTDEAKELLKSFEKHPDGDVRSVADSVLYIYQAPELKLGEENFMR 241 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig914.16961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig914.16961.1 >prot_H-paniculata_contig914.16961.1 ID=prot_H-paniculata_contig914.16961.1|Name=mRNA_H-paniculata_contig914.16961.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=311bp MTASSSAFLLHSPSHPYIALGRLLSVGSLPTTPRVPPYPRATNHVHRYVRback to top mRNA from alignment at H-paniculata_contig914:11611..21637- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig914.16961.1 ID=mRNA_H-paniculata_contig914.16961.1|Name=mRNA_H-paniculata_contig914.16961.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10027bp|location=Sequence derived from alignment at H-paniculata_contig914:11611..21637- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig914:11611..21637- >mRNA_H-paniculata_contig914.16961.1 ID=mRNA_H-paniculata_contig914.16961.1|Name=mRNA_H-paniculata_contig914.16961.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1866bp|location=Sequence derived from alignment at H-paniculata_contig914:11611..21637- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |