mRNA_H-paniculata_contig9128.16949.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9128.16949.1
Unique NamemRNA_H-paniculata_contig9128.16949.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Match: D7G881_ECTSI (Amino acid-binding ACT n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G881_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 3.790e-73
Identity = 143/291 (49.14%), Postives = 176/291 (60.48%), Query Frame = 2
Query:  113 IPTAFAAKEFQYAHPEAPTVVLRDARREVCMHLRVKGCERVIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDEKDRAQIPAQNHNTPLTKAQRTTARLVAQVAEGLAALHRAGIVHRDVKSHNVMITISRMKS----------------SDLGL-------ESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEVFGDEGYGTPADIFSLGVLIWEAFVQGSLENPLCGLTGQAYWRALKEGVRPPLSPMVPGVVKELIERCWAFEPGDRPMAEEVATNLMQF 916
            I T  AAKEF+Y   +AP  +LR A REVCMHLRV  C  V+A+ GVW+ PRVT+LLEPM+ G  H ++R    ++ +R +     H T     +R  ARLV++ A+GLAALH AGIVHRDVKSHNV++   R  +                SD          ES  EAKLGDLGSA LIP E ++ L EE GTSGW APEV    GYGTPAD+FSLGVLIW+AFV G+LENP+CG +G      L+        P+VP  ++ L ERCWA +P  RP A  VA  L  F
Sbjct:  354 IGTVLAAKEFRYTRADAPESILRQAHREVCMHLRVSDCAHVVAVRGVWVLPRVTILLEPMHGGNLHGFLRARVAEDDERKE----GHET-----RRQRARLVSEAADGLAALHHAGIVHRDVKSHNVLVVRQRQTAFGGAEPVVVRGREHGESDHNCTFLEGIDESGWEAKLGDLGSAALIPLEGQAALTEEIGTSGWTAPEVCEGRGYGTPADVFSLGVLIWDAFVCGALENPMCGRSGDQLTGRLRPRWPQAPFPVVPSDIERLAERCWAPDPEARPTAGAVAAELRAF 635          
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Match: A0A6H5JG30_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG30_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 2.080e-70
Identity = 142/291 (48.80%), Postives = 175/291 (60.14%), Query Frame = 2
Query:  113 IPTAFAAKEFQYAHPEAPTVVLRDARREVCMHLRVKGCERVIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDEKDRAQIPAQNHNTPLTKAQRTTARLVAQVAEGLAALHRAGIVHRDVKSHNVMITISRMKS----SDLGL-------------------ESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEVFGDEGYGTPADIFSLGVLIWEAFVQGSLENPLCGLTGQAYWRALKEGVRPPLSPMVPGVVKELIERCWAFEPGDRPMAEEVATNLMQF 916
            I T  AAKEF+Y   +AP  +LR A REVCMHLRV  C  V+AL GVW+ PRVT+LLEPM+ G  H ++R    +  +R +           + +R  ARLVA+ AEGLAALH AGIVHRDVKSHNV++   R  +      +G+                   ES  EAKLGDLGSA LIP + ++ L EE GTSGW APEV    GYGTPAD+FSLGVLIW+AFV G+LENP+CG +G      L+     P  P+VP  ++ L ERCW  +P  RP A  VA  L  F
Sbjct:  990 IGTVLAAKEFRYMRADAPESILRQAHREVCMHLRVSDCVNVVALRGVWVLPRVTILLEPMHEGNLHGFVRARAAEGHERQEG---------LETRRQRARLVAEAAEGLAALHNAGIVHRDVKSHNVLVVRQRRMAFGGAEPVGVRGCEHGERDQSCTFVDGIDESGWEAKLGDLGSAALIPLKGQAALTEEIGTSGWTAPEVCEGRGYGTPADVFSLGVLIWDAFVCGALENPMCGRSGDQLTGELRPRWPQPPLPVVPSDIERLAERCWVPDPEARPTASAVAAELRAF 1271          
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Match: A0A6A3VGJ6_9STRA (Protein kinase domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VGJ6_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.740e-32
Identity = 90/276 (32.61%), Postives = 147/276 (53.26%), Query Frame = 2
Query:  128 AAKEFQYAHPEAPTVVLRDARREVCMHLRVK---GCERVIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDEKDRAQIPAQNHNTPLTKAQRTTARLVAQVAEGLAALHRAGIVHRDVKSHNVMITISRMKSSDLGLESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEVFGDEGYGTPADIFSLGVLIWEAFVQGSLE---NPLCGLTGQAYWRALKEGVRPPLSPMVPGVVKELIERCWAFEPGDRPMAEEVATNLMQFEKGVDPV 937
            A KEF++ H   P  VLR  R+E  +  R +   G + V+ L GV + PR+ +L+E  + G+    ++    DE    ++  +             A L  ++A G+A LH+  ++HRD+KSHN++I      S DL   S    K+GDLGSA ++  + +S+L+EE G+SG+ APE+F   GY +  D++S G+++WE      L+   NP  G+ G+ +   +++G RP L+         ++E+CW F+P  RP   EV   + Q EK  D +
Sbjct:   67 AVKEFRHQHAVPPVSVLRAFRQEYRILARCRSQNGHQHVVELLGVTLEPRLIILMEYFDRGSLAQCLQ----DEAAWGEMSIKQK-----------ASLGLKIAHGIAWLHKHDMIHRDIKSHNILI------SGDLTTPSPT-VKIGDLGSA-VVHQQHDSLLQEEVGSSGYTAPEIFTRHGYDSKVDVWSFGIVLWE-LASSCLKDRINPFMGMAGEEFVTKVQDGCRPKLAHPHQIWFGSIVEKCWRFDPSQRPCMNEV---IKQLEKISDEL 315          
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Match: A0A8K1C678_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C678_PYTOL)

HSP 1 Score: 137 bits (346), Expect = 3.550e-32
Identity = 106/309 (34.30%), Postives = 147/309 (47.57%), Query Frame = 2
Query:    8 GQGKHSVVYHAEVASTEQELALVATVAKPAESATAIPTAFAAKEFQY---AHPEAPTVVLRDARREVCMHLRVKGCER--VIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDEKDRAQIPAQNHNTPLTKAQRTTARLVAQVAEGLAALHRAGIVHRDVKSHNVMITISRMKSSDLGLESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEVFGDEGYGTPADIFSLGVLIWEAFVQGSL----ENPLCGLTGQAYWRALKEGVRPPLSPMVPGVVKELIERCWAFEPGDRPMAEEVATNL 907
            G+G H+ VYH  +   E  +   A                  KEF+Y   +H   P +VL+  R+EV M LR        +I   GV + PR+ ++ E    G+    ++       D  + P     T L  A+        Q+A GLA LHR  IVHRD+K HNVMI   R   SD        AK+GDLGSA  I     S + EE G++G+ APEVF   GY   ADI+S G+++WE   + S      NP   L G      +++ VRP L P    + +EL+ RCW+F+P  RP A++V   L
Sbjct:  107 GEGVHAAVYHVRIRKGEDGMEEAAM-----------------KEFRYHPTSHGSPPILVLQAFRQEVEMLLRTSRDSNNYLIRFVGVILAPRLAIITEFCADGSLATCMQ-------DSERWPRVTTRTKLVIAR--------QIASGLATLHRQHIVHRDIKPHNVMI---RALQSD-----EPTAKIGDLGSA--IARNPASNVHEETGSAGYTAPEVFLPTGYDESADIWSYGIVVWEMMTRDSSLRRDGNPFRSLCGDDVVTLVRQDVRPALQPEH-SICRELVGRCWSFDPSKRPSADDVVDEL 372          
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Match: A0A2P4YCD7_9STRA (Protein Kinase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YCD7_9STRA)

HSP 1 Score: 139 bits (349), Expect = 3.690e-32
Identity = 88/267 (32.96%), Postives = 135/267 (50.56%), Query Frame = 2
Query:  128 AAKEFQYAHPEAPTVVLRDARREVCMHLRVK---GCERVIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDE--KDRAQIPAQNHNTPLTKAQRTTARLVAQVAEGLAALHRAGIVHRDVKSHNVMITISRMKSSDLGLESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEVFGDEGYGTPADIFSLGVLIWEAFVQGSLE--NPLCGLTGQAYWRALKEGVRPPLSPMVPGVVKELIERCWAFEPGDRPMAEEVATNL 907
            A KEF++ H   P  VLR  R+E  + +R +   GC  V+ L GV + PR+ +L++         Y+ HG L +  KD A     +    +         +  ++ +G+A LH+  IVHRD+K+HN++I        D     S   K+GDLGS  L   + E +L EE G+SG+ APE+F   GY    D++S G+++WE     +    NP  G+ G  +   ++ G RP         VK ++E+CWAFE   RP  +EV + L
Sbjct:  188 AVKEFRHQHAVPPVTVLRAFRQEYQILVRCRNRSGCHHVVELLGVALEPRLVILMD---------YLSHGSLAQCLKDEAAWDRMSIKQKVA--------IGLKIGQGIAWLHKHNIVHRDIKTHNILI-------GDDPTIPSPTVKIGDLGSGALW-NQHEPLLLEEVGSSGYTAPEIFTHNGYNDKVDVWSFGIVLWELTSNSAQNRLNPFVGMAGDEFVSKVQSGCRPNFMHAHQLCVKSIVEKCWAFESSHRPSMDEVVSQL 429          
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Match: A0A225W4W3_9STRA (Protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W4W3_9STRA)

HSP 1 Score: 138 bits (348), Expect = 5.050e-32
Identity = 89/272 (32.72%), Postives = 144/272 (52.94%), Query Frame = 2
Query:  128 AAKEFQYAHPEAPTVVLRDARREV-----CMHLRVKGCERVIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDEKDRAQIPAQNHNTPLTKAQRTTARLVA---QVAEGLAALHRAGIVHRDVKSHNVMITISRMKSSDLGLESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEVFGDEGYGTPADIFSLGVLIWEAFVQG--SLENPLCGLTGQAYWRALKEGVRPPLSPMVPG--VVKELIERCWAFEPGDRPMAEEVATNL 907
            A KEF++ H   P  VLR  ++E      C   R+ GC  V+ L G+ + PR+ +L+E         Y  HG L         AQ  N      Q +  + +    ++ +G+A +H+  ++HRD+KSHN+++        DL + S+   K+GDLGSA ++  ++ES+L EE G+SG+ APE+F   GY    D++S G+++WE       +  NP  G+ G+ + R ++ G RP  SP+ P    ++ ++E+CW F+P  RP   EV   L
Sbjct:  187 AVKEFRHQHACPPVNVLRTFQQEYRILERCQ--RMNGCRHVVGLLGITLEPRLIILME---------YFNHGSL---------AQCMNNEAAWKQMSIKQKITIGLKIGQGIAWMHKNNMIHRDIKSHNILV------GDDLTI-SNPTVKIGDLGSA-VLWNQNESLLTEEVGSSGYTAPEIFTQNGYDEKIDVWSFGIVLWELTSSSPQTRVNPFTGMAGEEFVRKVQNGCRP--SPVHPHQLFIRSVVEKCWIFDPSLRPNMAEVVNQL 428          
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Match: D0MU65_PHYIT (Protein kinase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU65_PHYIT)

HSP 1 Score: 138 bits (347), Expect = 7.350e-32
Identity = 90/266 (33.83%), Postives = 143/266 (53.76%), Query Frame = 2
Query:  128 AAKEFQYAHPEAPTVVLRDARREVCMHLRVK---GCERVIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDEKDRAQIPAQNHNTPLTKAQRTTARLVAQVAEGLAALHRAGIVHRDVKSHNVMITISRMKSSDLGLESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEVFGDEGYGTPADIFSLGVLIWEAFVQGSLEN---PLCGLTGQAYWRALKEGVRPPLSPMVPGVVKELIERCWAFEPGDRPMAEEVATNL 907
            A KEF++ H   P  VLR  ++E  +  R +   G E ++ L GV + PR+ +L+E  +  +    ++    DE    QI         T  Q  +  L  ++A G+A LHR  ++HRD+K+HN++I       +DL   ++   K+GDLGSA ++  + E +L EE G+SG+ APE+F  +GYG+  D++S GV++WE     SL N   P  G+TG+ +   ++ G RP  +      VK ++E+CW   P  RP  +EV   L
Sbjct:  190 AVKEFRHQHAVPPVNVLRAFQQEYRILERCRNQNGQEYIVELLGVILEPRLVILMEYFSHSSLAQCLQ----DEVSWGQI---------TIKQARSLTLGLKIARGIAWLHRHDMIHRDIKTHNILI------GADLATPNA-RVKVGDLGSA-VVWQQHEPLLLEEVGSSGYTAPEIFTHQGYGSKVDVWSFGVVLWEV-ASSSLHNRVNPFTGITGEEFVSKVQSGCRPHFAHTHQLCVKPVVEKCWTLNPSLRPTMDEVVNEL 433          
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Match: A0A2D4BEL8_PYTIN (TKL protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEL8_PYTIN)

HSP 1 Score: 139 bits (349), Expect = 8.240e-31
Identity = 98/272 (36.03%), Postives = 139/272 (51.10%), Query Frame = 2
Query:  128 AAKEFQYAHPEA------PTVVLRDARREVCMHLRVKGC-ERVIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDEKDRAQIPAQNHNTPLTKAQRTTARLVAQVAEGLAALHRAGIVHRDVKSHNVMITISRMKSSDLGLESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEVFGDEGYGTPADIFSLGVLIWEAFVQGSLENPLCGLTGQAYWRALKEGVRPPLSPMVPGVVKELIERCWAFEPGDRPMAEEVATNLMQFEK 922
            A K+F+Y  P        P+ VL   RRE+    R++   E ++ LHG  +TP + ++ E  + G      RH   D    + +              T   +  Q+A+GLAALH A +VHRDVK HNVM+  +R+ S +    ++  AK+GDLGSA +  + D  V  EE G+SG+ APEVF   GY   AD++SLGV++WE  V     NP  G  G    R + EGVRP  +   P  +  L++ CW  +P  RP A EVA  L    +
Sbjct:  749 AVKQFRY-QPRGIDERLPPSRVLAAFRRELETLQRLQNVSESLVRLHGAVLTPTLAIVTELXDDG------RHCMQDTSTWSSVSLA-----------TKLSIATQLAKGLAALHAAHVVHRDVKPHNVML--ARLHSHN---GANVVAKIGDLGSAAVCASPDVRVF-EEIGSSGYTAPEVFQPSGYDARADVWSLGVVLWELLVDSRERNPFVGRAGDDVLRLVHEGVRPSCAD-APAPLVALLQACWLVDPSQRPTAHEVAQALQAIAR 995          
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Match: G4Z7M8_PHYSP (Protein kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z7M8_PHYSP)

HSP 1 Score: 129 bits (325), Expect = 6.660e-29
Identity = 86/266 (32.33%), Postives = 139/266 (52.26%), Query Frame = 2
Query:  128 AAKEFQYAHPEAPTVVLRDARRE--VCMHLRVKGC-ERVIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDEKDRAQIPAQNHNTPLTKAQRTTARLVAQVAEGLAALHRAGIVHRDVKSHNVMITISRMKSSDLGLESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEVFGDEGYGTPADIFSLGVLIWE---AFVQGSLENPLCGLTGQAYWRALKEGVRPPLSPMVPGVVKELIERCWAFEPGDRPMAEEVATNL 907
            A KEF++ H   P  VLR    E  +    RV+G  + ++ L GV + PR+ +L+E  + G+    ++    DE    ++P +             + +  ++A G+A LH+  ++HRD+KSHN++I      S DL    S   K+GDLGSA ++  + E +L EE G+SG+ APE+F   GY +  D++S G+++WE     VQ  L NP  G+ G  +    + G RP L+         ++++CW F+P  RP  +EV   L
Sbjct:  191 AVKEFRHQHAVPPVSVLRAFILEYRILARCRVEGGHQHIVELLGVTVAPRLIILMEYFDRGSLAQCLQ----DEAAWGRLPIKQ-----------VSLVGLKIARGIAWLHKHDMIHRDIKSHNIII------SGDL-TRPSPSVKIGDLGSA-IVRQQQEPLLVEEVGSSGYTAPEIFTRHGYDSKVDVWSFGIVLWELASCCVQDRL-NPFMGMAGDEFVTKAQGGCRPKLAHAHQVWFGPIVKKCWRFDPSQRPDMDEVVKQL 432          
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Match: W2RJI7_PHYPN (TKL protein kinase n=8 Tax=Phytophthora TaxID=4783 RepID=W2RJI7_PHYPN)

HSP 1 Score: 130 bits (328), Expect = 1.370e-28
Identity = 82/265 (30.94%), Postives = 141/265 (53.21%), Query Frame = 2
Query:  128 AAKEFQYAHPEAPTVVLRDARREVCMHLRVK---GCERVIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDEKDRAQIPAQNHNTPLTKAQRTTARLVAQVAEGLAALHRAGIVHRDVKSHNVMITISRMKSSDLGLESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEVFGDEGYGTPADIFSLGVLIWEAFVQG--SLENPLCGLTGQAYWRALKEGVRPPLSPMVPGVVKELIERCWAFEPGDRPMAEEVATNL 907
            A KEF++ H   P  VLR  ++E  +    +   G E ++ LHGV + PR+ +L+E  +    H+ +    L+E    Q+  ++  T           L  ++A G++ LH  G++HRD+K+HN++I        DL   +    K+GDLGSA ++ ++++ +L EE G+SG+ APE+F  +GY    D++S G+++WE       +  NP  G+TG+     ++   RP         VK ++E+CW  +P  RP  +EV ++L
Sbjct:  349 AVKEFRHQHTVPPVNVLRAFQQEYQILKTCRSQNGNEYIVELHGVILEPRLIILMEYFS----HNSLAQCLLNEVTWGQMTMKHKAT-----------LGLKIARGISWLHMHGMIHRDIKTHNILI------GDDLATPNP-RVKIGDLGSA-IVWSQNDPLLLEEVGSSGYTAPEIFTHQGYDRKVDVWSFGIVLWELTASSIRNRVNPFTGVTGEELVSKVQSECRPNFVHAHQLCVKPIVEKCWILDPSQRPTMDEVVSDL 590          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9128.16949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G881_ECTSI3.790e-7349.14Amino acid-binding ACT n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JG30_9PHAE2.080e-7048.80Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6A3VGJ6_9STRA1.740e-3232.61Protein kinase domain-containing protein n=2 Tax=P... [more]
A0A8K1C678_PYTOL3.550e-3234.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4YCD7_9STRA3.690e-3232.96Protein Kinase n=1 Tax=Phytophthora palmivora var.... [more]
A0A225W4W3_9STRA5.050e-3232.72Protein kinase n=1 Tax=Phytophthora megakarya TaxI... [more]
D0MU65_PHYIT7.350e-3233.83Protein kinase n=1 Tax=Phytophthora infestans (str... [more]
A0A2D4BEL8_PYTIN8.240e-3136.03TKL protein kinase n=1 Tax=Pythium insidiosum TaxI... [more]
G4Z7M8_PHYSP6.660e-2932.33Protein kinase domain-containing protein n=1 Tax=P... [more]
W2RJI7_PHYPN1.370e-2830.94TKL protein kinase n=8 Tax=Phytophthora TaxID=4783... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9128contigH-paniculata_contig9128:1349..4434 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.4
Seed ortholog evalue3.7e-57
Seed eggNOG ortholog2880.D7G881
Preferred nameNTRK2
KEGG koko:K01315,ko:K02355,ko:K03176,ko:K04360,ko:K05101,ko:K05122,ko:K05123,ko:K05127,ko:K05129,ko:K08252,ko:K08899,ko:K16353
KEGG Pathwayko04010,ko04014,ko04080,ko04151,ko04210,ko04610,ko04722,ko04750,ko05034,ko05150,ko05164,ko05200,ko05202,ko05216,ko05230,map04010,map04014,map04080,map04151,map04210,map04610,map04722,map04750,map05034,map05150,map05164,map05200,map05202,map05216,map05230
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000165,GO:0000186,GO:0000187,GO:0000902,GO:0000904,GO:0001101,GO:0001501,GO:0001502,GO:0001505,GO:0001558,GO:0001568,GO:0001570,GO:0001654,GO:0001664,GO:0001708,GO:0001725,GO:0001736,GO:0001738,GO:0001745,GO:0001751,GO:0001754,GO:0001756,GO:0001764,GO:0001775,GO:0001838,GO:0001841,GO:0001843,GO:0001932,GO:0001933,GO:0001934,GO:0001941,GO:0001944,GO:0002009,GO:0002039,GO:0002064,GO:0002088,GO:0002165,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002684,GO:0002761,GO:0002763,GO:0003002,GO:0003006,GO:0003008,GO:0003205,GO:0003231,GO:0003279,GO:0003281,GO:0003401,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004675,GO:0004713,GO:0004714,GO:0004888,GO:0005003,GO:0005004,GO:0005030,GO:0005102,GO:0005109,GO:0005126,GO:0005165,GO:0005166,GO:0005215,GO:0005244,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005783,GO:0005791,GO:0005794,GO:0005829,GO:0005856,GO:0005874,GO:0005886,GO:0005887,GO:0005911,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006865,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006954,GO:0006996,GO:0007010,GO:0007154,GO:0007155,GO:0007163,GO:0007164,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007178,GO:0007202,GO:0007223,GO:0007224,GO:0007254,GO:0007267,GO:0007275,GO:0007389,GO:0007399,GO:0007405,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007422,GO:0007423,GO:0007444,GO:0007483,GO:0007484,GO:0007485,GO:0007486,GO:0007507,GO:0007528,GO:0007548,GO:0007552,GO:0007560,GO:0007568,GO:0007600,GO:0007605,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007616,GO:0007623,GO:0007631,GO:0007635,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008284,GO:0008285,GO:0008356,GO:0008361,GO:0008406,GO:0008582,GO:0008584,GO:0009266,GO:0009314,GO:0009415,GO:0009416,GO:0009581,GO:0009582,GO:0009605,GO:0009611,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009897,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0009991,GO:0010001,GO:0010033,GO:0010035,GO:0010243,GO:0010465,GO:0010468,GO:0010517,GO:0010518,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010623,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010769,GO:0010770,GO:0010863,GO:0010941,GO:0010942,GO:0010975,GO:0010976,GO:0010996,GO:0012501,GO:0012505,GO:0012506,GO:0014002,GO:0014013,GO:0014014,GO:0014020,GO:0014047,GO:0014066,GO:0014068,GO:0014069,GO:0014070,GO:0014823,GO:0014850,GO:0015026,GO:0015075,GO:0015267,GO:0015629,GO:0015630,GO:0015711,GO:0015800,GO:0015849,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016048,GO:0016049,GO:0016055,GO:0016301,GO:0016310,GO:0016331,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0017145,GO:0017147,GO:0018108,GO:0018193,GO:0018212,GO:0019048,GO:0019054,GO:0019056,GO:0019199,GO:0019219,GO:0019220,GO:0019222,GO:0019233,GO:0019538,GO:0019722,GO:0019725,GO:0019838,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019932,GO:0021537,GO:0021543,GO:0021545,GO:0021553,GO:0021675,GO:0021782,GO:0021915,GO:0021953,GO:0021954,GO:0021987,GO:0022008,GO:0022414,GO:0022603,GO:0022604,GO:0022610,GO:0022803,GO:0022832,GO:0022836,GO:0022839,GO:0022857,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030010,GO:0030029,GO:0030030,GO:0030036,GO:0030054,GO:0030097,GO:0030098,GO:0030111,GO:0030135,GO:0030136,GO:0030139,GO:0030154,GO:0030165,GO:0030177,GO:0030178,GO:0030182,GO:0030183,GO:0030215,GO:0030307,GO:0030323,GO:0030324,GO:0030326,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030509,GO:0030516,GO:0030538,GO:0030539,GO:0030540,GO:0030659,GO:0030662,GO:0030665,GO:0030666,GO:0030669,GO:0030855,GO:0030859,GO:0030900,GO:0030971,GO:0031090,GO:0031098,GO:0031175,GO:0031224,GO:0031226,GO:0031290,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031435,GO:0031532,GO:0031547,GO:0031594,GO:0031667,GO:0031960,GO:0031982,GO:0031984,GO:0032101,GO:0032103,GO:0032147,GO:0032148,GO:0032222,GO:0032224,GO:0032268,GO:0032269,GO:0032270,GO:0032279,GO:0032432,GO:0032501,GO:0032502,GO:0032526,GO:0032535,GO:0032809,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033135,GO:0033138,GO:0033143,GO:0033145,GO:0033267,GO:0033554,GO:0033555,GO:0033674,GO:0033993,GO:0034097,GO:0034220,GO:0034612,GO:0034613,GO:0035088,GO:0035089,GO:0035094,GO:0035107,GO:0035108,GO:0035112,GO:0035113,GO:0035126,GO:0035148,GO:0035215,GO:0035239,GO:0035260,GO:0035282,GO:0035295,GO:0035556,GO:0035567,GO:0035584,GO:0035690,GO:0035821,GO:0036211,GO:0036445,GO:0036477,GO:0038023,GO:0038083,GO:0038179,GO:0038180,GO:0039656,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0042051,GO:0042052,GO:0042060,GO:0042063,GO:0042113,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042330,GO:0042461,GO:0042462,GO:0042471,GO:0042472,GO:0042490,GO:0042493,GO:0042592,GO:0042641,GO:0042733,GO:0042802,GO:0042803,GO:0042813,GO:0042981,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043087,GO:0043113,GO:0043121,GO:0043122,GO:0043123,GO:0043170,GO:0043195,GO:0043197,GO:0043200,GO:0043204,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043235,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043506,GO:0043507,GO:0043523,GO:0043524,GO:0043525,GO:0043547,GO:0043549,GO:0043583,GO:0043679,GO:0044003,GO:0044068,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044298,GO:0044306,GO:0044309,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045137,GO:0045165,GO:0045196,GO:0045197,GO:0045198,GO:0045200,GO:0045202,GO:0045211,GO:0045321,GO:0045334,GO:0045471,GO:0045595,GO:0045596,GO:0045597,GO:0045637,GO:0045639,GO:0045649,GO:0045651,GO:0045664,GO:0045666,GO:0045685,GO:0045686,GO:0045765,GO:0045766,GO:0045773,GO:0045859,GO:0045860,GO:0045887,GO:0045893,GO:0045927,GO:0045935,GO:0045936,GO:0045937,GO:0045995,GO:0046328,GO:0046330,GO:0046530,GO:0046546,GO:0046548,GO:0046578,GO:0046579,GO:0046649,GO:0046660,GO:0046661,GO:0046677,GO:0046716,GO:0046717,GO:0046777,GO:0046903,GO:0046928,GO:0046942,GO:0046982,GO:0046983,GO:0048011,GO:0048013,GO:0048015,GO:0048017,GO:0048103,GO:0048167,GO:0048265,GO:0048266,GO:0048403,GO:0048406,GO:0048468,GO:0048483,GO:0048485,GO:0048511,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048588,GO:0048589,GO:0048592,GO:0048598,GO:0048608,GO:0048638,GO:0048639,GO:0048646,GO:0048663,GO:0048665,GO:0048666,GO:0048667,GO:0048668,GO:0048670,GO:0048672,GO:0048678,GO:0048679,GO:0048680,GO:0048686,GO:0048687,GO:0048690,GO:0048691,GO:0048699,GO:0048705,GO:0048707,GO:0048708,GO:0048709,GO:0048710,GO:0048712,GO:0048729,GO:0048731,GO:0048736,GO:0048749,GO:0048786,GO:0048803,GO:0048804,GO:0048805,GO:0048806,GO:0048807,GO:0048808,GO:0048812,GO:0048839,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048934,GO:0048935,GO:0050730,GO:0050731,GO:0050767,GO:0050768,GO:0050769,GO:0050770,GO:0050772,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050803,GO:0050804,GO:0050806,GO:0050807,GO:0050808,GO:0050839,GO:0050877,GO:0050890,GO:0050896,GO:0050900,GO:0050906,GO:0050920,GO:0050921,GO:0050926,GO:0050927,GO:0050951,GO:0050954,GO:0050961,GO:0050965,GO:0050966,GO:0050974,GO:0050982,GO:0051046,GO:0051049,GO:0051056,GO:0051057,GO:0051090,GO:0051091,GO:0051092,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051216,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051270,GO:0051272,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051384,GO:0051385,GO:0051403,GO:0051412,GO:0051493,GO:0051495,GO:0051588,GO:0051599,GO:0051602,GO:0051606,GO:0051641,GO:0051668,GO:0051674,GO:0051701,GO:0051704,GO:0051716,GO:0051817,GO:0051896,GO:0051960,GO:0051961,GO:0051962,GO:0051963,GO:0051965,GO:0051966,GO:0051968,GO:0052026,GO:0052312,GO:0055057,GO:0055059,GO:0055085,GO:0060008,GO:0060009,GO:0060026,GO:0060041,GO:0060070,GO:0060071,GO:0060076,GO:0060089,GO:0060173,GO:0060175,GO:0060191,GO:0060193,GO:0060249,GO:0060255,GO:0060284,GO:0060291,GO:0060322,GO:0060341,GO:0060384,GO:0060385,GO:0060395,GO:0060429,GO:0060484,GO:0060485,GO:0060541,GO:0060548,GO:0060560,GO:0060562,GO:0060606,GO:0060828,GO:0060976,GO:0061024,GO:0061053,GO:0061097,GO:0061098,GO:0061162,GO:0061245,GO:0061339,GO:0061351,GO:0061366,GO:0061368,GO:0061387,GO:0061448,GO:0061458,GO:0061564,GO:0065007,GO:0065008,GO:0065009,GO:0070302,GO:0070304,GO:0070306,GO:0070372,GO:0070374,GO:0070570,GO:0070572,GO:0070727,GO:0070848,GO:0070887,GO:0071229,GO:0071230,GO:0071300,GO:0071310,GO:0071316,GO:0071340,GO:0071345,GO:0071356,GO:0071363,GO:0071396,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071772,GO:0071773,GO:0071840,GO:0071900,GO:0071902,GO:0071936,GO:0071944,GO:0072089,GO:0072175,GO:0072358,GO:0072359,GO:0072499,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090090,GO:0090102,GO:0090103,GO:0090162,GO:0090175,GO:0090178,GO:0090179,GO:0090263,GO:0090596,GO:0090598,GO:0090630,GO:0097060,GO:0097237,GO:0097305,GO:0097447,GO:0097458,GO:0097485,GO:0097517,GO:0097529,GO:0097708,GO:0098552,GO:0098588,GO:0098590,GO:0098722,GO:0098743,GO:0098791,GO:0098793,GO:0098794,GO:0098805,GO:0098984,GO:0099080,GO:0099081,GO:0099173,GO:0099175,GO:0099177,GO:0099512,GO:0099513,GO:0099536,GO:0099537,GO:0099538,GO:0099540,GO:0099550,GO:0099551,GO:0099572,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:0198738,GO:1900019,GO:1900020,GO:1900274,GO:1901214,GO:1901215,GO:1901216,GO:1901342,GO:1901564,GO:1901626,GO:1901628,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902105,GO:1902107,GO:1902531,GO:1902533,GO:1902680,GO:1903034,GO:1903036,GO:1903506,GO:1903508,GO:1903530,GO:1903706,GO:1903708,GO:1903827,GO:1903829,GO:1903859,GO:1903909,GO:1903911,GO:1903995,GO:1903997,GO:1904018,GO:1904393,GO:1904395,GO:1904396,GO:1904398,GO:1904929,GO:1905114,GO:1905276,GO:1905330,GO:1905475,GO:1905477,GO:1905517,GO:1990089,GO:1990090,GO:1990416,GO:1990782,GO:2000026,GO:2000027,GO:2000112,GO:2000145,GO:2000147,GO:2000209,GO:2000249,GO:2000251,GO:2000322,GO:2000324,GO:2000539,GO:2000541,GO:2000811,GO:2001141
EggNOG free text desc.transmembrane receptor protein tyrosine kinase activity
EggNOG OGsCOG0515@1,KOG1026@2759
Ec32 ortholog descriptionAmino acid-binding ACT
Ec32 orthologEc-12_001120.1
EC2.7.10.1,3.4.21.7
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko01002,ko01009,ko01020,ko03012,ko03029,ko04050,ko04147,ko04516
Exons4
Model size1706
Cds size759
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9128.16949.1prot_H-paniculata_contig9128.16949.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9128 2155..3695 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931137.690838-UTR-H-paniculata_contig9128:1348..16451622931137.690838-UTR-H-paniculata_contig9128:1348..1645Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9128 1349..1645 -
1691481607.5755942-UTR-H-paniculata_contig9128:1348..16451691481607.5755942-UTR-H-paniculata_contig9128:1348..1645Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9128 1349..1645 -
1622931137.7113903-UTR-H-paniculata_contig9128:1706..21541622931137.7113903-UTR-H-paniculata_contig9128:1706..2154Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9128 1707..2154 -
1691481607.5912473-UTR-H-paniculata_contig9128:1706..21541691481607.5912473-UTR-H-paniculata_contig9128:1706..2154Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9128 1707..2154 -
1622931137.78373-UTR-H-paniculata_contig9128:3695..38541622931137.78373-UTR-H-paniculata_contig9128:3695..3854Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9128 3696..3854 -
1691481607.6219492-UTR-H-paniculata_contig9128:3695..38541691481607.6219492-UTR-H-paniculata_contig9128:3695..3854Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9128 3696..3854 -
1622931137.7995894-UTR-H-paniculata_contig9128:4391..44341622931137.7995894-UTR-H-paniculata_contig9128:4391..4434Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9128 4392..4434 -
1691481607.6322384-UTR-H-paniculata_contig9128:4391..44341691481607.6322384-UTR-H-paniculata_contig9128:4391..4434Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9128 4392..4434 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931137.7427058-CDS-H-paniculata_contig9128:2154..24661622931137.7427058-CDS-H-paniculata_contig9128:2154..2466Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9128 2155..2466 -
1691481607.6027148-CDS-H-paniculata_contig9128:2154..24661691481607.6027148-CDS-H-paniculata_contig9128:2154..2466Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9128 2155..2466 -
1622931137.76408-CDS-H-paniculata_contig9128:3248..36951622931137.76408-CDS-H-paniculata_contig9128:3248..3695Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9128 3249..3695 -
1691481607.6120656-CDS-H-paniculata_contig9128:3248..36951691481607.6120656-CDS-H-paniculata_contig9128:3248..3695Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9128 3249..3695 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9128.16949.1

>prot_H-paniculata_contig9128.16949.1 ID=prot_H-paniculata_contig9128.16949.1|Name=mRNA_H-paniculata_contig9128.16949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp
MHLRVKGCERVIALHGVWITPRVTLLLEPMNAGTFHHYIRHGGLDEKDRA
QIPAQNHNTPLTKAQRTTARLVAQVAEGLAALHRAGIVHRDVKSHNVMIT
ISRMKSSDLGLESSCEAKLGDLGSADLIPTEDESVLREEAGTSGWVAPEV
FGDEGYGTPADIFSLGVLIWEAFVQGSLENPLCGLTGQAYWRALKEGVRP
PLSPMVPGVVKELIERCWAFEPGDRPMAEEVATNLMQFEKGVDPVRRRCC
VA*
back to top

mRNA from alignment at H-paniculata_contig9128:1349..4434-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9128.16949.1 ID=mRNA_H-paniculata_contig9128.16949.1|Name=mRNA_H-paniculata_contig9128.16949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3086bp|location=Sequence derived from alignment at H-paniculata_contig9128:1349..4434- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGTACGGGCAGGGAAAGCACTCGGTGGTGTATCACGCGGAGGTAATAT CGGCGGGGGGTAACGGGGTAACAAGAAAAGACCAGTCAAATGGCGACATC CGAGATCCATCGAAAAAACATGTTCGTCTCGGACGATAGAAGATAATGCG GAAGACAGGAAACTATAGCCCCAATTATGGCAAGGGGATGACCGCTGATG TTGTCAGGGCGGGAAAGTCGGGAGAAATTTTGATGAGTCTCTGCAAGAAC CCCGGCATGTGGAACGGTGCCTTCTGCGTTGGTGATGACAGATATATTAG TATATGCCACCAAACCTCGAGGGGTAGGTACGAGACCCGGAATATTCCAC GGGCGGCGGGGGGAACTTTCATGTCCTTCTCCTCCGGGGACATTATTGTA CAATCCCCTATTCAAAATGTTAGGACATTGCTTCACCAAAATGTTACATC AGATAAGGAGGCCAATGCAGCCTATACAGGGGATGTTACAACAGAATCCC CTGAGTACATTCTGCAGAAGGCATCTAGCAATTAGCATATTTTAAAGCCC CTCGACCGTTAACTGACTGCAATGGAGCAGGTCGCATCCACCGAGCAAGA GTTAGCTTTGGTCGCAACAGTTGCGAAGCCGGCAGAGTCGGCGACAGCAA TACCGACGGCATTTGCTGCGAAAGAGTTCCAATACGCCCACCCCGAGGCA CCGACAGTAGTTCTGCGTGACGCGAGGCGGGAGGTATGTATGCATCTTCG CGTTAAGGGATGCGAGCGCGTGATAGCGCTACATGGGGTCTGGATTACTC CTCGAGTTACGCTGCTGCTGGAACCCATGAACGCGGGCACTTTCCATCAT TATATCCGCCACGGTGGACTCGATGAGAAAGATCGAGCGCAGATTCCTGC ACAAAATCACAACACACCGCTTACGAAGGCACAACGAACGACAGCGCGAC TTGTCGCTCAGGTCGCCGAAGGCCTTGCCGCGTTACATCGCGCTGGGATT GTCCATCGTGACGTAAAGAGTCACAACGTAATGATAACGATATCCCGGAT GAAGTCATCGGACTTGGGGTTAGAATCATCGTGCGAAGCAAAGCTTGGAG ACCTTGGAAGCGCCGATTTGATCCCTACAGAGGATGAATCGGTGCTAAGA GAGGAGGCTGGGACGAGCGGATGGGTTGCACCTGAGGTAACAAAGTTCAT CCGGAGCTGGTTGGTATCTCTTTCATTAACATGTTGATAAACCCACGATA ATCGCGATGTAACTTTACTACTACATGTCGGCTAAATTAGTCGATCTGGC GCCACGCGGCCAGTATATAATCTAGCGAAGATCGACGCCAGGCAGTACGG CCGTTGGGACGGCGGTCTAGTCTTTAGTACTCGTCCCGCTCGTAGGTAAA GCATGGTGCTCGTGGTACGTAAGGTTATAGACGCGTACGGACGTTACCTA ACCTTGAAACTCATGTGTGCAAACCTGCTGAATTGGAGTAAGAAAACCGT GGAACAGGCCGTAGACAACTATACATTAGCGGCGTACCTGACAGTTGTCC ATGCTAGTTAGCACTATCCCGCAAACTCAATAGTGCTATAAAATTTCCAC TTCGCCGACAGCAAGTAAAGCTGGATACCCAGCCCACAGACACAGTGATG AGCACTACACGTACATTGCTAGGAGGGAAAAACGTGGACCCGTAGATAGC GTTTTTTCGCGTCGTGCGGGCTTACTTGCCAAGCTATCACGACCACGCTA ATCGGTATTCCCCACACCCAGGGCCTTCCGACCTATGCCTTATATCAGAG TAGAAGCAATAACCTGTCTGTGTCCACCTAGCTGTAGCAGGAGCAGGTCA TTACTCAGTTCAGTAAATATGAAATAGTAAGTCGTGCTTGTGCACCACCC GCAACAATATTCGAGCCCCCCACCCTATCCCTCTGCCTGGTTCACGGATG GGTGCTTTTATGCCGCAGGTGTTCGGAGATGAAGGCTACGGCACACCGGC AGATATTTTCAGCTTAGGTGTTCTAATTTGGGAGGCTTTCGTTCAGGGGT CGCTGGAAAATCCGCTATGTGGACTCACGGGGCAAGCATACTGGAGAGCG TTGAAAGAAGGAGTGAGGCCACCTTTGTCCCCGATGGTGCCGGGTGTGGT GAAAGAGTTGATAGAGCGTTGCTGGGCGTTTGAGCCAGGGGATCGGCCAA TGGCGGAAGAAGTTGCCACAAACCTTATGCAATTTGAGAAAGGGGTGGAC CCTGTGAGAAGGCGTTGCTGTGTGGCTTGACGTCTCGGCAGAGACACGCA GAGTTGACACTTAGATTGAAAGGGAAACGGTGCCGCAGTTCTCCTATTGG TCAAAATTGTTGGAAGGAGAAATCGGATTGGTCGAAAAAATACCTCTGCT TGACAAGGAACATTTTTTACCCAGGATATTTCTGAGCGGGTGAGATTAAT CCGTAACAAAAATTGATGACGGTGAAGTGTTCTTCAACCCGTGCATATGT GACCACAACATCAGGCACGGCTGCGCAGCTAAGACATACTCGCGGGTTGG GGCGGCATGGTTGTCGTCATTTGACTTCGTTGTGTGTCCAAAAGAGGTCT GGCGGAGCTTCTGCGAACTACTGTATCCGTGGAGAGTCGCGAGAGCAGTC GTTACGAAGTAGAGATACAATCGGGTGCTTCCAGGCTTTGTGCTGGAAAG ATCAACAGGATAGCCGTTTTATATGAATATGAGTATTTTATATGGGAGGG TGCAAAGGCTACGCACCTTAAAGGATGCTCCTGTTGGACCCCATCGAGGC GAAAGAACGAGTCTGTCAGTCTTGCTGTGCGAAAGTTTCTGCTAGACGGT CAAGGTGATGTGTTTCGTGATTTCACAGTGTTATATGCAGCGATAACGTT GAAGAATTCAAAGGACTCGGTACCGTTTTTGATGATATAGTGTAGGTAGC ATCTGGTTATGATTTTCCAGCGCCATGTAGGCAGTGTTCTAACGTGAAAG TAGAGGGCATCGCGGAACGGCACTACATGGGGTGGGTCAGTAATGTTACG GTCGGAGTTGAGCATGTTTGTAGCGGAGACCTTTCG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig9128:1349..4434-

>mRNA_H-paniculata_contig9128.16949.1 ID=mRNA_H-paniculata_contig9128.16949.1|Name=mRNA_H-paniculata_contig9128.16949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at H-paniculata_contig9128:1349..4434- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCATCTTCGCGTTAAGGGATGCGAGCGCGTGATAGCGCTACATGGGGT
CTGGATTACTCCTCGAGTTACGCTGCTGCTGGAACCCATGAACGCGGGCA
CTTTCCATCATTATATCCGCCACGGTGGACTCGATGAGAAAGATCGAGCG
CAGATTCCTGCACAAAATCACAACACACCGCTTACGAAGGCACAACGAAC
GACAGCGCGACTTGTCGCTCAGGTCGCCGAAGGCCTTGCCGCGTTACATC
GCGCTGGGATTGTCCATCGTGACGTAAAGAGTCACAACGTAATGATAACG
ATATCCCGGATGAAGTCATCGGACTTGGGGTTAGAATCATCGTGCGAAGC
AAAGCTTGGAGACCTTGGAAGCGCCGATTTGATCCCTACAGAGGATGAAT
CGGTGCTAAGAGAGGAGGCTGGGACGAGCGGATGGGTTGCACCTGAGATG
CATCTTCGCGTTAAGGGATGCGAGCGCGTGATAGCGCTACATGGGGTCTG
GATTACTCCTCGAGTTACGCTGCTGCTGGAACCCATGAACGCGGGCACTT
TCCATCATTATATCCGCCACGGTGGACTCGATGAGAAAGATCGAGCGCAG
ATTCCTGCACAAAATCACAACACACCGCTTACGAAGGCACAACGAACGAC
AGCGCGACTTGTCGCTCAGGTCGCCGAAGGCCTTGCCGCGTTACATCGCG
CTGGGATTGTCCATCGTGACGTAAAGAGTCACAACGTAATGATAACGATA
TCCCGGATGAAGTCATCGGACTTGGGGTTAGAATCATCGTGCGAAGCAAA
GCTTGGAGACCTTGGAAGCGCCGATTTGATCCCTACAGAGGATGAATCGG
TGCTAAGAGAGGAGGCTGGGACGAGCGGATGGGTTGCACCTGAGGTGTTC
GGAGATGAAGGCTACGGCACACCGGCAGATATTTTCAGCTTAGGTGTTCT
AATTTGGGAGGCTTTCGTTCAGGGGTCGCTGGAAAATCCGCTATGTGGAC
TCACGGGGCAAGCATACTGGAGAGCGTTGAAAGAAGGAGTGAGGCCACCT
TTGTCCCCGATGGTGCCGGGTGTGGTGAAAGAGTTGATAGAGCGTTGCTG
GGCGTTTGAGCCAGGGGATCGGCCAATGGCGGAAGAAGTTGCCACAAACC
TTATGCAATTTGAGAAAGGGGTGGACCCTGTGAGAAGGCGTTGCTGTGTG
GCTTGAGTGTTCGGAGATGAAGGCTACGGCACACCGGCAGATATTTTCAG
CTTAGGTGTTCTAATTTGGGAGGCTTTCGTTCAGGGGTCGCTGGAAAATC
CGCTATGTGGACTCACGGGGCAAGCATACTGGAGAGCGTTGAAAGAAGGA
GTGAGGCCACCTTTGTCCCCGATGGTGCCGGGTGTGGTGAAAGAGTTGAT
AGAGCGTTGCTGGGCGTTTGAGCCAGGGGATCGGCCAATGGCGGAAGAAG
TTGCCACAAACCTTATGCAATTTGAGAAAGGGGTGGACCCTGTGAGAAGG
CGTTGCTGTGTGGCTTGA
back to top