mRNA_H-paniculata_contig9118.16947.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 104 bits (260), Expect = 5.530e-24 Identity = 52/88 (59.09%), Postives = 60/88 (68.18%), Query Frame = 1
Query: 1 DSFLPALKEKMPWLEDEEVVAQQDGATHHTRKDMPRKLNELGRDEGWNVNFITQPAQSPDLNINDLGFFASMESRVLRERCGTIDDLV 264
D LPA+KEKMPWL + VV QQDGA+ HT K P LN G GW V +TQPAQSPDLNINDLG FAS++ RV +ID+LV
Sbjct: 277 DVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Match: A0A7S3GU94_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU94_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.290e-22 Identity = 43/125 (34.40%), Postives = 75/125 (60.00%), Query Frame = 1
Query: 22 KEKMPWLEDEEVVAQQDGATHHTRKDMPRKLNELGRDEGWNVNFITQPAQSPDLNINDLGFFASMESRVLRERCGT--IDDLVEAVKNMYDAYDAATLEGVWQSLFKRYNQVSQALGGNEFEVQH 390
KEKMPW+ + + Q DGA HT + +++ EGW++ + Q AQSPDLN+ DLG F S++ +V++ + G ID+L++ V+ +Y Y TL+ +W + ++ +A+G N+++ H
Sbjct: 4 KEKMPWMRNRRLKIQHDGARPHTAGGLEDEVHATASTEGWHITMVRQRAQSPDLNVMDLGLFHSLKVQVIQLKDGAHNIDELIQKVRVVYQQYSRDTLDQIWGHQVACWTEIMRAMGSNQYKAPH 128
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Match: A0A6A4ECW5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4ECW5_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.320e-21 Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 1
Query: 1 DSFLPALKEKMP-WLEDEEVVAQQDGATHHTRKDMPRKLNELGRDEGWNVNFITQPAQSPDLNINDLGFFASMESRVLRERCGTIDDLVEAVKNMYDAYDAATLEGVWQSLFKRYNQVSQALGGNEFEVQHTENKKRQRAGSLPKS 435
+ +PA+K K P W + +V QQD AT H + P L G +GWN+ QPA SPDLN DLG+FAS+++ RE C I L++A++ Y A + L+ + +L V +A G NE+++ H K +R G LP S
Sbjct: 298 EHIIPAIKSKWPVWDKSSPIVIQQDNATPHCQPTDPDILA-AGVADGWNIRLAFQPANSPDLNTLDLGYFASIQALPYREDCCDIVQLIQAIRKSYAALEVYKLDNITLTLQSSMECVMRAAGSNEYKLPHAGKSKIRREGKLPHS 442
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Match: UPI000B8AF499 (uncharacterized protein LOC110800263 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AF499) HSP 1 Score: 95.5 bits (236), Expect = 7.270e-21 Identity = 51/146 (34.93%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 1 DSFLPALKEKMPWLEDEEVVAQQDGATHHTRKDMPRKLNELGRDEGWNVNFITQPAQSPDLNINDLGFFASMESRVLRERCGTIDDLVEAVKNMYDAYDAATLEGVWQSLFKRYNQVSQALGGNEFEVQHTENKKRQRAGSLPKSV 438
+ LPA+K K P +++ QQD A H + R+ E +G+N+ + QPAQSPD+NI DLGFF +++S + ++ L+EAV+N Y A D+ + W L ++ Q GGN ++ H KK +R G LP +
Sbjct: 125 EDLLPAIKSKWPSNACKDIWIQQDNARPHISPN-DREFLEAATQDGFNIRLVNQPAQSPDMNILDLGFFRAIQSIQYKSFPDSVTSLIEAVENAYIALDSKAMNFTWMHLKYCMIEILQVQGGNNYKNPHKGKKKLERLGLLPTEI 269
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Match: A0A6G0WF09_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WF09_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.630e-20 Identity = 50/130 (38.46%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 1 DSFLPALKEKMPWLEDEE--VVAQQDGATHHTRKDMPRKLNELGRDEGWNVNFITQPAQSPDLNINDLGFFASMESRVLRERCGTIDDLVEAVKNMYDAYDAATLEGVWQSLFKRYNQVSQALGGNEFEV 384
D LPA+K K W +E + QQD A H+R D L D GWN+ QPA+SPDLN+ DLGFF S+++ R CGTI++L++AVK + + TLE +++L + + + G N F++
Sbjct: 58 DLVLPAIKHKWAWPSNEHGTIFNQQDNAPAHSRLDDAEILAACNSD-GWNIEMRFQPAKSPDLNVLDLGFFNSIQALQQRFECGTIEELIDAVKISFHELERLTLEKTFRTLHRVMQVIIEFKGDNRFKI 186
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Match: UPI000B797179 (uncharacterized protein LOC110716342 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B797179) HSP 1 Score: 92.8 bits (229), Expect = 3.470e-20 Identity = 53/145 (36.55%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 10 LPALKEKMPWLEDEEVVAQQDGATHHTRKDMPRKLN--ELGRDEGWNVNFITQPAQSPDLNINDLGFFASMESRVLRERCGTIDDLVEAVKNMYDAYDAATLEGVWQSLFKRYNQVSQALGGNEFEVQHTENKKRQRAGSLPKSV 438
+PA+K K P ++VV Q D A H +PR E G+N+ FI QPAQSPDLN+ DL F S++S + +D+LV+ VK+ YD +D + +W +L ++ +A GGN++++ H KK + G LP+ V
Sbjct: 80 IPAIKSKWPESLAKDVVIQWDNARPHK---VPRDAEFIEATTTNGFNIQFIFQPAQSPDLNVLDLALFRSIQSLQYQSFFTDLDELVQKVKDSYDTFDPEVNKYIWVTLQNCMIKILKAEGGNKYKIPHMNKKKLENIGFLPEIV 221
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Match: UPI000B8AB67D (uncharacterized protein LOC110800636 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AB67D) HSP 1 Score: 95.1 bits (235), Expect = 5.710e-20 Identity = 50/146 (34.25%), Postives = 77/146 (52.74%), Query Frame = 1
Query: 1 DSFLPALKEKMPWLEDEEVVAQQDGATHHTRKDMPRKLNELGRDEGWNVNFITQPAQSPDLNINDLGFFASMESRVLRERCGTIDDLVEAVKNMYDAYDAATLEGVWQSLFKRYNQVSQALGGNEFEVQHTENKKRQRAGSLPKSV 438
D LPA++ K PW ++++ QQD + H + L+ EG+N+ I QP QSPDLN+ DLGFF +++S ++ ++ LV+AVK Y+AYD + W L ++ GGN ++ H K G LP +V
Sbjct: 375 DELLPAIRSKWPWFASKDILIQQDNSRPHINPNDAEFLD-AATQEGFNIQLICQPPQSPDLNVLDLGFFRAIQSLQHQKFPRDVEALVKAVKEAYEAYDPKLINYTWLQLQYVMLEILGVKGGNNYKSPHKGKAKMDNLGLLPDTV 519
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Match: UPI000B797FC7 (uncharacterized protein LOC110699849 n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B797FC7) HSP 1 Score: 94.0 bits (232), Expect = 6.060e-20 Identity = 54/145 (37.24%), Postives = 82/145 (56.55%), Query Frame = 1
Query: 10 LPALKEKMPWLEDEEVVAQQDGATHHTRKDMPRKLN--ELGRDEGWNVNFITQPAQSPDLNINDLGFFASMESRVLRERCGTIDDLVEAVKNMYDAYDAATLEGVWQSLFKRYNQVSQALGGNEFEVQHTENKKRQRAGSLPKSV 438
+PA+K K P ++VV Q D A H +PR E G+N+ FI QPAQSPDLN+ DLG F S++S + +D+LV+ VK+ YD +D + +W +L ++ +A GGN++++ H KK + G LP+ V
Sbjct: 193 IPAIKSKWPESLAKDVVIQWDNARPHQ---VPRDAEFIEATTTNGFNIQFIFQPAQSPDLNVLDLGLFRSIQSLQYQFFPKDLDELVQKVKDSYDTFDPEVNKYIWVTLQNCMIKILKAKGGNKYKIPHMNKKKLENIGILPEIV 334
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Match: UPI000B778AD2 (uncharacterized protein LOC110722901 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B778AD2) HSP 1 Score: 90.5 bits (223), Expect = 1.790e-19 Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 1 DSFLPALKEKMPWLEDEEVVAQQDGATHHTRKDMPRKLNELGRDEGWNVNFITQPAQSPDLNINDLGFFASMESRVLRERCGTIDDLVEAVKNMYDAYDAATLEGVWQSLFKRYNQVSQALGGNEFEVQHTENKKRQRAGSLPKSV 438
+ +PA++ P + + QQD A H D P L E +D G++++ I QPAQSPDLN+ DLGFF ++++ +E ++++LVE+V Y +YD + W ++ + GGN F+ H K+ QR G LP V
Sbjct: 63 EEVMPAIRATWPENSCKTIWIQQDNARPHINIDDPEFLEEANKD-GFDMHLICQPAQSPDLNVLDLGFFRAIQAIQHQEFPESVEELVESVLTSYASYDPRIINMTWLHSMYVMEEIMKVKGGNNFKNPHKGKKRLQRLGLLPSYV 207
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Match: A0A6G0WUD8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUD8_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 3.360e-19 Identity = 50/130 (38.46%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 1 DSFLPALKEKMPWLEDEE--VVAQQDGATHHTRKDMPRKLNELGRDEGWNVNFITQPAQSPDLNINDLGFFASMESRVLRERCGTIDDLVEAVKNMYDAYDAATLEGVWQSLFKRYNQVSQALGGNEFEV 384
D LPA+K K W +E + QQD A H+R D L D GWN+ QPA+SPDLN+ DLGFF S+++ R CGTI++L++AVK + + TLE +++L + + + G N F++
Sbjct: 257 DLVLPAIKNKWVWPSNEHGTIFVQQDNAPAHSRLDDAEILAACNSD-GWNIEMRFQPAKSPDLNVLDLGFFNSIQALQQRLECGTIEELIDAVKISFHDLERLTLEKTFRTLHRVVQVIIEFKGDNRFKI 385 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9118.16947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9118.16947.1 >prot_H-paniculata_contig9118.16947.1 ID=prot_H-paniculata_contig9118.16947.1|Name=mRNA_H-paniculata_contig9118.16947.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp MPWLEDEEVVAQQDGATHHTRKDMPRKLNELGRDEGWNVNFITQPAQSPDback to top mRNA from alignment at H-paniculata_contig9118:12..452+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9118.16947.1 ID=mRNA_H-paniculata_contig9118.16947.1|Name=mRNA_H-paniculata_contig9118.16947.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=441bp|location=Sequence derived from alignment at H-paniculata_contig9118:12..452+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9118:12..452+ >mRNA_H-paniculata_contig9118.16947.1 ID=mRNA_H-paniculata_contig9118.16947.1|Name=mRNA_H-paniculata_contig9118.16947.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=822bp|location=Sequence derived from alignment at H-paniculata_contig9118:12..452+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |