mRNA_H-paniculata_contig910.16936.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Match: A0A6H5L694_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L694_9PHAE) HSP 1 Score: 499 bits (1284), Expect = 1.930e-165 Identity = 290/529 (54.82%), Postives = 350/529 (66.16%), Query Frame = 2
Query: 545 SVTEVHSLEGLTWRDMRVGQQSAGDIFGR--GKPHWPSMPSFTLAGAXXXXXXXXXXXXXXXXXXXXEP-----------WWRTIG-SDAKARRVWMMLGGVLLAIIVAVSFRGGGEKQ-EGVQSPLSAGTPRRR-------------RDPSDPP------SPLRQRLRDVAEAALAQGITRPMPTTFEIIRDGPPAGRDTGEEDGEGGEGKGGGMDFIVSVISAEALKAKAATATPSSSAASSDPFDPRVLDARMTVEDLPPAHSLVLNKFNTMADHALIITKGFQHQEEALTEYDFAAWYRVVDALPGVGFYNSASEAGASQRHKHMQVIPEDSLWDYRPAAPQAIPVDEPISRLIGNSRDLSKVWRIPEFNFRHALCLVPSVTELVDMQRIEVGDGSDDSARWIAEYLQDRYVNLLEAVGLQ-SMMVAESMKTPPPPLSSSNKQTGSLPPYNAILTTRWLMVVPRSARKWNGVDVNGMGFFGALLVRAKLKGAASDVKEGREAGGDVGVEAVRGPGASAVLEAVTL 2026
S +VHSL+G+TWRDMRVG QSA +F R G+P WPSMPSF+ G E WWR+ S RR WM++GGV++A+++AV+ GGG+ EG +SPLSAGTPR R ++ P SPLRQRL+ VA+ ALA+GIT PM TTFE++R +GEG E +GG MDFIVSVIS EAL+AKAA ATP +SAAS DPFDPRVLD RM VE+LPP+HSLVLNKFNTM +HALIIT FQ Q+EALTE DF AWYRVV+ LPGVGFYNSA +AGASQRHKHMQVIP+D+LWDYRPAA +AIPVDEPISRL+G+SRDLS+VWR+P F F+HA L+PS+ EL E G G DD +R +A +L+ RYV+LL VG S ++A+ P ++S +LPPYNA+LT RWLM+VPRS R+W G+DVNGMGF GALLVR K AG GV +VR PGA AVLE VT
Sbjct: 160 SGVKVHSLDGVTWRDMRVGNQSARALFDRVQGRP-WPSMPSFSFGGILGGEAGITDAMNTTSGNNGVEEGGPSDGGIVDTWWRSFARSPGGVRRFWMVIGGVIVAVLIAVALNGGGDGDVEGDKSPLSAGTPRHRIGGAPSGGXXXXXXXXAEGPGSYAGTSPLRQRLQHVADTALAEGITLPMHTTFEVVR-----------AEGEGEE-EGGAMDFIVSVISGEALEAKAAIATPPASAASDDPFDPRVLDPRMAVEELPPSHSLVLNKFNTMRNHALIITTEFQSQQEALTEEDFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDEPISRLVGSSRDLSRVWRLPTFRFQHAFTLLPSLQELG-----EEGVGDDDPSRRMAAHLRTRYVDLLREVGFDTSSLLAQEPTRTPGDAAASTAPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAF-----------AGEGAGVASVREPGALAVLEGVTF 659
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Match: D8LQY6_ECTSI (Ap4A phosphorylase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY6_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 1.860e-137 Identity = 255/509 (50.10%), Postives = 306/509 (60.12%), Query Frame = 2
Query: 602 QQSAGDIFGRGKPH-WPSMPSFTLAGAXXXXXXXXXXXXXXXXXXXXEP-----------WWRTIG-SDAKARRVWMMLGGVLLAIIVAVSFRGGGEKQ-EGVQSPLSAGTPRRRRDPSDP-------------------PSPLRQRLRDVAEAALAQGITRPMPTTFEIIRDGPPAGRDTGEEDGEGGEGKGGGMDFIVSVISAEALKAKAATATPSSSAASSDPFDPRVLDARMTVEDLPPAHSLVLNKFNTMADHALIITKGFQHQEEALTEYDFAAWYRVVDALPGVGFYNSASEAGASQRHKHMQVIPEDSLWDYRPAAPQAIPVDEPISRLIGNSRDLSKVWRIPEFNFRHALCLVPSVTELVDMQRIEVGDGSDDSARWIAEYLQDRYVNLLEAVGLQ-SMMVAESMKTPPPPLSSSNKQTGSLPPYNAILTTRWLMVVPRSARKWNGVDVNGMGFFGALLVRAKLKGAASDVKEGREAGGDVGVEAVRGPGASAVLEAVTL 2026
+QSA DIF R + WP+MPSF+ G E WWR+ S RR WM++GGVL+A+++AV+ GGG+ EG +SPLSAGTPR R + PSPLRQRL+ VA+ ALA GIT PM TTFE AL+AKAA ATP +SAAS DPFDPRVLD RM +LPP+HSLVLNKFNT+ +HALIIT FQ Q+EALTE DF AWYRVV+ LPGVGFYNSA +AGASQRHKHMQVIP+D+LWDYRPAA +AIPVDEPISRL+G+SRD S+VWR+P F F+HA L+PS+ EL E G G DD +R +A +L+ RYV LL VG S ++A+ P ++S +LPPYNA+LT RWLM+VPRS R+W G+DVNGMGF GALLVR K AG GV +VR PGA AVLE VT
Sbjct: 49 KQSARDIFDRVQGRRWPAMPSFSFGGILGGEAGITDAMNTASGDNGVEEGGPSGGGIVDAWWRSFARSPGGVRRFWMVIGGVLVAVLIAVALNGGGDGDVEGDRSPLSAGTPRHRISGAPGSGGSTSTSGSAEGPGSYAGPSPLRQRLQHVADTALADGITLPMHTTFE-------------------------------------ALEAKAAIATPPASAASDDPFDPRVLDPRM---ELPPSHSLVLNKFNTVRNHALIITTEFQSQQEALTEEDFGAWYRVVEELPGVGFYNSAVDAGASQRHKHMQVIPDDALWDYRPAANEAIPVDEPISRLVGSSRDFSRVWRLPTFRFQHAFTLLPSLQELG-----EEGSGDDDPSRRMAAHLKTRYVELLREVGFDTSSLLAQEPTRTPGDATASTVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAF-----------AGEGAGVASVREPGALAVLEGVTF 501
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Match: A0A836C9Y6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y6_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.700e-40 Identity = 131/384 (34.11%), Postives = 174/384 (45.31%), Query Frame = 2
Query: 923 PSPLRQRLRDVAEAALAQGITRPMPTTFEIIRDGPPAGRDTGEEDGEGGEGKGGGMDFIVSVISAEALKAKAATATPSSSAASS---------------------DPFDPRVLDARMTVED-LPPAHSLVLNKFNTMADHALIITKGFQHQEEALTEYDFAAWYRVVDALPGVGFYNSASEAGASQRHKHMQVIPEDSLWDYRPAAP-QAIPVDEPISRLIGNSRDLSK-------VWRIPEFNFRHALCLVPSVTELVDMQRIEVGDGSDDSARWIAEYLQDRYVNLLEAVGLQSMMVAESMKTPPPPLSSSN----------KQTGSLPPYNAILTTRWLMVVPRSARKWNGVDVNGMGFFGALLVRAKLKGA----ASDVK 1942
P L + A+ A G+ +P+ T+ + DG G+DFIVS +SA KAA + + AA DPF DARM V +PP H LVLNKF T+A HAL++T F+ Q LT DFAAWY VV A VGF+NSA+EAGASQRHKHMQ++P L + P + +P+D IS + ++ ++R+P F F+H L L+P + L+ G L Y LL GL A SS +L P+N +LTTRW++VVPR+ GV+VNG+GF G+LLV A G A DVK
Sbjct: 1171 PRDLPAAITRATHASAAAGLLKPIATSCRRVHDG--------------------GIDFIVSTVSAARQAEKAAKSNLTPGAADGGXXXXXXXXXXXXXXXXXXARDPFARESRDARMVVAPRVPPEHVLVLNKFPTLAGHALLVTDAFREQATPLTAGDFAAWYAVVAAADAVGFFNSAAEAGASQRHKHMQLVP---LASFAPCTQSRGLPIDSAISMATARTSTVTAANDSEAAIFRLPNFKFKHGLTLLPPESALLH--------GXXXXXXXAGMPLLAIYSALLRRTGLLDCAAAPGDCAFAGGAGSSGCGDSGGGSTVAPAAALAPHNVLLTTRWMLVVPRARAGCAGVNVNGLGFMGSLLVHADGDGGGAGGAPDVK 1523
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Match: A0A0P7YTZ2_9CYAN (ATP adenylyltransferase n=4 Tax=Oscillatoriales TaxID=1150 RepID=A0A0P7YTZ2_9CYAN) HSP 1 Score: 155 bits (393), Expect = 5.880e-39 Identity = 113/330 (34.24%), Postives = 163/330 (49.39%), Query Frame = 2
Query: 923 PSPLRQRLRDVAEAALAQGITRPMPTTFEIIRDGPPAGRDTGEEDGEGGEGKGGGMDFIVSVISAEALKAKAATATPSSSAASSDPFDPRV-LDARMTVEDLPPAHSLVLNKFNTMADHALIITKGFQHQEEALTEYDFAAWYRVVDALPGVGFYNSASEAGASQRHKHMQVIPEDSLWDYRPAAPQAIPVDEPISRLIGNSRDLSKVWRIPEFNFRHALCLVPSVTELVDMQRIEVGDGSDDSARWIAEYLQDRYVNLLEAVGLQSMMVAESMKTPPPPLSSSNKQTGSLPPYNAILTTRWLMVVPRSARKWNGVDVNGMGFFGALLVR 1909
P+ L R + + AL G +P+PT FE ++ G + F+V ++ KAKA A + A+ PF+P + D ++ V +L P+H +LNKFN + H LI+T+ F+HQ LT DFAA + + G+GFYN +EAGASQ HKH+Q+IP + D +P++ I++ L K+ R P F F HA+ + S DS+ E LQ +Y LL AVGL TP + +QTG+ YN ++T WLMVVPRS + G+ +N +GF GALLVR
Sbjct: 10 PNTLWPRTLEQTQFALDCGALQPIPTEFEYLQQGE--------------------IRFLVRTLANIDRKAKAKAAETRQAEATGKPFNPFLPYDEKLFVANLSPSHVCLLNKFNVVEHHLLIVTREFEHQNTWLTLADFAALQVGLREIDGLGFYNGGTEAGASQPHKHLQLIPLPLMPDG-----DRLPIEGAIAQTEYAGTGLDKIGRSPGFPFNHAIAPI-----------------SPDSS---PEQLQQQYYRLLNAVGLIDA-------TP-----RTERQTGA---YNLLITRNWLMVVPRSQEGFAGISLNALGFAGALLVR 279
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Match: A0A3D8JZM3_9BURK (Phosphorylase n=1 Tax=Trinickia dinghuensis TaxID=2291023 RepID=A0A3D8JZM3_9BURK) HSP 1 Score: 148 bits (374), Expect = 2.280e-36 Identity = 122/357 (34.17%), Postives = 165/357 (46.22%), Query Frame = 2
Query: 965 ALAQGITRPMPTTFEIIRDGPPAGRDTGEEDGEGGEGKGGGMDFIVSVISAEALKAKAATATPSSSAASSDPFDPRVLDARMTVEDLPPAHSLVLNKFNTMADHALIITKGFQHQEEALTEYDFAAWYRVVDALPGVGFYNSASEAGASQRHKHMQVIPEDSLWDYRPAAPQAIPVDEPISRLIGNSRDLSKVWRIPEFNFRHALC-LVPSVTELVDMQRIEVGDGSDDSARWIAEYLQDRYVNLLEAVGLQSMMVAESMKTPPPPLSSSNKQTGSLPPYNAILTTRWLMVVPRSARKWNGVDVNGMGFFGALLVRAKLKGAASDVKEGREAGGDVGVEAVRGPGASAVLEAVTLPR 2032
ALA G RP+ T + DG G+ F+V +S+ L AK +P + + DPF P D + V D+ P H +LNKFN + H L++T+ F+ QE L DF A + + G+GFYN EAGASQ HKH+Q++P SL D A QA+P+D LI + KV R+P F HA L P E V +Q +E RY LLEAVGL SM V Q+ PYN + T +W+++VPRSA K + + VN +GF G+L VR + ++AVR G +L VTLPR
Sbjct: 22 ALACGALRPIETVQTTLDDG--------------------GIRFVVRQVSS--LAAKPVQDSPVRQSVA-DPFLPH--DPDLFVADVSPTHFALLNKFNVIDHHLLVVTRAFEPQEALLDLDDFTALFACLAQFDGLGFYNGGREAGASQAHKHLQIVPL-SLGD----AAQALPIDA----LIEAATFTEKVGRLPGLPFEHAFTRLTPGSPEQVAVQALE------------------RYRLLLEAVGLGSMDVG-----------GREHQSA---PYNLLATPKWMLLVPRSAEKADDIAVNSLGFAGSLFVRDAQR-----------------LDAVRRIGPMTILRRVTLPR 295
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Match: UPI000E245E60 (phosphorylase n=1 Tax=Trinickia diaoshuihuensis TaxID=2292265 RepID=UPI000E245E60) HSP 1 Score: 147 bits (370), Expect = 8.050e-36 Identity = 112/316 (35.44%), Postives = 158/316 (50.00%), Query Frame = 2
Query: 1085 GMDFIVSVISAEALKAKAATATPSSSAASSDPFDPRVLDARMTVEDLPPAHSLVLNKFNTMADHALIITKGFQHQEEALTEYDFAAWYRVVDALPGVGFYNSASEAGASQRHKHMQVIPEDSLWDYRPAAPQAIPVDEPISRLIGNSRDLSKVWRIPEFNFRHALCLVPSVTELVDMQRIEVGDGSDDSARWIAEYLQDRYVNLLEAVGLQSMMVAESMKTPPPPLSSSNKQTGSLPPYNAILTTRWLMVVPRSARKWNGVDVNGMGFFGALLVRAKLKGAASDVKEGREAGGDVGVEAVRGPGASAVLEAVTLPR 2032
G+ F+V +S+ L K A AT S+ A DPF P D + V D+ P H +LNKFN + H LI+T+ F QE L DFAAW+ ++ G+GFYN +AGASQ HKH+Q++P L D +AIP+D LI + + S + R+P F HA R+ G GS+ + E ++RY LL VGL ++ VA + PYN +LT +W+++VPRSA + +G+ VN +GF G+L V+ A D+ EAVR G +L V LPR
Sbjct: 42 GIRFVVRQVSS--LMRKPA-ATKRSTGACVDPFLPH--DPDLFVADVSPTHFALLNKFNVIDHHLLIVTREFVPQEALLDLDDFAAWFACLNEFDGLGFYNGGRDAGASQPHKHLQIVPLP-LGD----GGEAIPIDT----LIDATANESAIVRLPGLPFEHAFT------------RLTPGSGSE-----MPEQARERYRALLHTVGLGAIDVAG--------------RAHQSAPYNLLLTPKWMLLVPRSAEQVDGIAVNALGFAGSLFVKT-----AQDM------------EAVRAMGPMTLLRRVGLPR 295
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Match: A0A168WQX1_9CYAN (Phosphorylase n=2 Tax=Phormidium TaxID=1198 RepID=A0A168WQX1_9CYAN) HSP 1 Score: 146 bits (368), Expect = 1.670e-35 Identity = 106/331 (32.02%), Postives = 159/331 (48.04%), Query Frame = 2
Query: 920 PPSPLRQRLRDVAEAALAQGITRPMPTTFEIIRDGPPAGRDTGEEDGEGGEGKGGGMDFIVSVISAEALKAKAATATPSSSAASSDPFDPRV-LDARMTVEDLPPAHSLVLNKFNTMADHALIITKGFQHQEEALTEYDFAAWYRVVDALPGVGFYNSASEAGASQRHKHMQVIPEDSLWDYRPAAPQAIPVDEPISRLIGNSRDLSKVWRIPEFNFRHALCLVPSVTELVDMQRIEVGDGSDDSARWIAEYLQDRYVNLLEAVGLQSMMVAESMKTPPPPLSSSNKQTGSLPPYNAILTTRWLMVVPRSARKWNGVDVNGMGFFGALLVR 1909
PP+ L R + + AL G +P+PT F+ ++ G + F+V ++ KAKA A + + PF+P + D ++ V DL +H +LNKFN + H L++T+ F+HQ LT DFAA + + G+GFYN ++AGASQ HKH+Q++P + D +P++ I++ + L+K+ R P F HA+ + T E LQ +Y LL AVGL TP + +QTG+ YN + T WLMVVPRS + G+ +N +GF GALLVR
Sbjct: 9 PPNTLWTRTLEQTQFALDCGALQPIPTEFQYLQQGE--------------------IRFLVRTLANIDRKAKAKAAETRQTQETGKPFNPFLPYDEKLFVADLSASHVCLLNKFNVVEHHLLMVTREFEHQNTWLTVADFAALQVGLREIDGLGFYNGGTDAGASQPHKHLQLVPLPLMPDG-----DRLPIEGAIAQTEYDGTGLNKIGRSPWLPFTHAIAPISPNTS--------------------PEQLQQQYYRLLTAVGLIDA-------TP-----RTEQQTGA---YNLLATRDWLMVVPRSQEGFAGISLNALGFAGALLVR 279
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Match: A0A4V1EII2_9BURK (Phosphorylase n=1 Tax=Burkholderia sp. DHOD12 TaxID=2571746 RepID=A0A4V1EII2_9BURK) HSP 1 Score: 142 bits (357), Expect = 5.850e-34 Identity = 101/278 (36.33%), Postives = 139/278 (50.00%), Query Frame = 2
Query: 1085 GMDFIVSVISAEALKAKAATATPSSSAASS--DPFDPRVLDARMTVEDLPPAHSLVLNKFNTMADHALIITKGFQHQEEALTEYDFAAWYRVVDALPGVGFYNSASEAGASQRHKHMQVIPEDSLWDYRPAAPQAIPVDEPISRLIGNSRDLSKVWRIPEFNFRHALC-LVPSVTELVDMQRIEVGDGSDDSARWIAEYLQDRYVNLLEAVGLQSMMVAESMKTPPPPLSSSNKQTGSLPPYNAILTTRWLMVVPRSARKWNGVDVNGMGFFGALLVR 1909
G+ FIV +S+ A K +A A + SAAS +PF P D + V D+ H +LNKFN + H LI+T+ F QE L DFAAW+ + G+GFYNS SEAGASQ HKH+Q++P P + + PI L+ +R + IP FRHA L P+ D RI + RY LL+AV Q+ + +N +T S PYN ++T W+++VPRSA + V VN +GF G+L VR
Sbjct: 43 GVRFIVREVSSLARKDQARPAPAARSAASPPVNPFLPH--DPNLFVADVSDTHFALLNKFNVIDHHLLIVTRSFIRQETPLNAADFAAWFACLAEFDGLGFYNSGSEAGASQPHKHLQIVP-------LPLGTSGLRL--PIEPLLNTARLQGTIGTIPGLPFRHAFATLDPASVRYPDAGRIA----------------EARYRALLDAVQRQT--------------APANGETPSQLPYNLLVTPSWMLLVPRSAERVESVAVNALGFAGSLFVR 279
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Match: A0A1G8DZC5_9BURK (ATP adenylyltransferase n=1 Tax=Paraburkholderia phenazinium TaxID=60549 RepID=A0A1G8DZC5_9BURK) HSP 1 Score: 141 bits (356), Expect = 7.460e-34 Identity = 108/330 (32.73%), Postives = 154/330 (46.67%), Query Frame = 2
Query: 923 PSPLRQRLRDVAEAALAQGITRPMPTTFEIIRDGPPAGRDTGEEDGEGGEGKGGGMDFIVSVISAEALKAKAATATPSSSAASSDPFDPRV-LDARMTVEDLPPAHSLVLNKFNTMADHALIITKGFQHQEEALTEYDFAAWYRVVDALPGVGFYNSASEAGASQRHKHMQVIPEDSLWDYRPAAPQAIPVDEPISRLIGNSRDLSKVWRIPEFNFRHALCLVPSVTELVDMQRIEVGDGSDDSARWIAEYLQDRYVNLLEAVGLQSMMVAESMKTPPPPLSSSNKQTGSLPPYNAILTTRWLMVVPRSARKWNGVDVNGMGFFGALLVR 1909
P+ LRQ E AL G RP+ TT +I +G G+ FIV +S+ A K +A + + +A F+P + D + V DL H +LNKFN + H LI+T+ F+ QE L DFAA + VGFYN +EAGASQ HKH+Q++P P P+ PI ++ ++R IP +FRHA +++G A A+ + D Y LL+AVGLQ++ V N + PYN ++ RW+++VPRSA GV VN +GF G+L VR
Sbjct: 13 PAILRQ-----TEHALRCGALRPIDTTQALIEEG--------------------GVRFIVRQVSSLARKEEARQTSKAKAAGDHSAFNPFLPYDPDLFVADLSDTHVALLNKFNVIDHHLLIVTRSFKSQEALLDLADFAALVACMAEFDSVGFYNGGAEAGASQPHKHLQMVP-------LPLDASGAPL--PIESVLAHARMEGSTGTIPALDFRHAFA------------HLDLGPSGSPHA---AQTVFDCYCALLKAVGLQAIEV--------------NGELLQSAPYNLLVARRWMLLVPRSAEYVEGVSVNALGFVGSLFVR 279
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Match: UPI000404CAA0 (DUF4922 domain-containing protein n=1 Tax=Burkholderia sp. WSM2230 TaxID=944435 RepID=UPI000404CAA0) HSP 1 Score: 140 bits (353), Expect = 2.000e-33 Identity = 102/326 (31.29%), Postives = 153/326 (46.93%), Query Frame = 2
Query: 965 ALAQGITRPMPTTFEIIRDGPPAGRDTGEEDGEGGEGKGGGMDFIVSVISAEALKAKAATATPSSSAASS--DPFDPRVLDARMTVEDLPPAHSLVLNKFNTMADHALIITKGFQHQEEALTEYDFAAWYRVVDALPGVGFYNSASEAGASQRHKHMQVIPEDSLWDYRPAAPQAIPVDE-----PISRLIGNSRDLSKVWRIPEFNFRHALCLVPSVTELVDMQRIEVGDGSDDSARWIAEYLQDRYVNLLEAVGLQSMMVAESMKTPPPPLSSSNKQTGSLPPYNAILTTRWLMVVPRSARKWNGVDVNGMGFFGALLVRAKLK 1921
ALA G P+ TT I DG G+ F++ +S+ K + A + +A + +PF P DA + V D+ H L+LNKFN + H L++T+ F+ QE L DF A + + G+GFYNS AGASQ HKH+Q++P +P+DE PI L+ +R V +P F HA + T+L D +A D+Y++LL+A GL +++V N + PYN ++TTRW+M+VPR A + G+ VN +GF G+L VR ++
Sbjct: 23 ALACGALHPIQTTRTTIEDG--------------------GVRFLIRQVSSLERKEQDARRRKTDAATNCAINPFLP--CDANLFVADISDTHLLLLNKFNVIDHHLLVVTRRFELQENLLNLADFYALFDCMTQFEGLGFYNSGPAAGASQPHKHLQIVP--------------LPLDESAPHVPIESLLATARTDGAVCTVPGLGFPHAFTRLD--TKLADRPPE------------LARSAFDKYLSLLDAAGLHAVVV--------------NGEARQSAPYNLLVTTRWMMLVPRRAERAEGIAVNALGFAGSLFVRDDMQ 284 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig910.16936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig910.16936.1 >prot_H-paniculata_contig910.16936.1 ID=prot_H-paniculata_contig910.16936.1|Name=mRNA_H-paniculata_contig910.16936.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=527bp MSTREKVMDDPAVMEGAVINEEEDTDDEEESVTEVHSLEGLTWRDMRVGQback to top mRNA from alignment at H-paniculata_contig910:5905..20437- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig910.16936.1 ID=mRNA_H-paniculata_contig910.16936.1|Name=mRNA_H-paniculata_contig910.16936.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14533bp|location=Sequence derived from alignment at H-paniculata_contig910:5905..20437- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig910:5905..20437- >mRNA_H-paniculata_contig910.16936.1 ID=mRNA_H-paniculata_contig910.16936.1|Name=mRNA_H-paniculata_contig910.16936.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3162bp|location=Sequence derived from alignment at H-paniculata_contig910:5905..20437- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |