mRNA_H-paniculata_contig91.16933.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig91.16933.1 vs. uniprot
Match: D7FW09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW09_ECTSI) HSP 1 Score: 736 bits (1901), Expect = 1.020e-245 Identity = 496/1144 (43.36%), Postives = 633/1144 (55.33%), Query Frame = 1
Query: 1 ANLEYFLGLYDEAERRSTRAFELGHQDDGSMWLRVARMFVRRYTAHPSNS-RCLPAALEAFSEAFKFKRIDSRPIHHLEMTSVYLKMNETQKAAQILAMIMQRWPVSSVPQDNTAHRH----GDDRAEVELPVPGLILGSVSVFLQMGMCYDNLGRARMANEAYKQVWNTLLEQRDKDLARDAGDSLFPVTNDDDGK----ATGCDELGNILRRARATLGIVSSATSWSTNASNEPAAHSNCHQI-GTLRCRRTSP--GGVPT-----AGRSSNDRFNPLPTEAKLFTPPRSRGDVGSASRAAAEEKAVRD------LAFELWYKDPYTWFRFGQVLLNGGCHSLALTILDKAVGLLPRGLIKQEQGRFGEAYYAAKEARDLEPFGKGVRRLCPRLMALHSEDDRAQYIVESLAAARLQRGWREHRIVRTLKEAVRTQIAALRIQRFMRHWKQCNRWISLRLVVASAMELSGVLATCAGGMGQAARAASEQRLNELARSAFLVQRSCRVFLAQSEVSRRRKAIVTLQAMFRGCERRWEVAAA----LQLRYC-----------------------------PSRENTHAT----KAG----------------NNKKWTSHLSSTANVLRVGVLTRRNAPMDKDCATGCGSANRAAFLWETGSYT----CADDSAKYRDSPSA---H-GGSTNGDHS------DESINKDGAVFELCAIAGYSTANDSRETRDHRPRRSDADESWKMSDISQKSH-----------------PAPSMQ--QWITPAVAPEAALTQALRCSILVVSSPSFNSASACRLLSRLGLPINNTQAPISSDHSPITAEKQDAGTTLYGQKHGNWCHTEPVATRNGLLDGASVHETLETQGENITHLLVHGASPLGDTGLSVLSSAMRSVDTLSRLTTLVIGGHGCRVGTRGITALGKALSSPNCPRLRCLSLSNCCLGRQRY----------NSKITPA------AAAAAHEAWDVFFRHLQRMP-LLSLSLENCGLGNADIQCAANAIQIFPAGRLRCLRLGGNRVGATGLRILLRALTSKRMRLPALWVRRQHPPIIEHDARGVICRAFKEGLLAEVEFERPRQEEGGRSRLEIVEHTAELDDLGRCSRKGSTSHIYV 3054
A+L Y+LGLYDEAE RA ELGH++DGSM LR+ARM VRR A +N+ R L +AL ++SEA KF R+ S +H+LE+TSVYLK+NETQ+AA L+ ++ RWP V +N H DRAEV+LPV +LG S+FLQMG C++ L + +MA EAY+Q WNTLLEQR A ++F T G G DE+G ILR+A+ L S +TS + S + + GT R P G P GR P ++ RGD G +S +++ V D L FELW K+PYTWF FG+V+L GGC++L L L KAV LLP GL +QE+GRFG+A+ AA+EARDL+PFGK VR LCPRLMALHS D R QY ES +A R+QR WR HR++R L + V Q AALRIQRFMR W++ ++LRLV SA+ELS + A MG AA+AA+ RL L SA VQR+ RV +A VSRR++AI LQA RGC RW ++AA L+L Y P RE T K G + ++ + ++ NV ++GV+ RRN PMD CA G N AAFLWE+ CADD D+P+ H G T S S DGAVFE A A S+A R+ R + D S H P P +Q +W+ VAPE A +AL CS L+V+SPSF+S+SA RL SR+G PI P K A G+ N H E R +H + H+L+ G SP+GD GLS LSSA+R L RLTTLVIGG GC+VG RG+ AL ALS+ C +L+ LS+SNCCLGRQ+ S + PA AAA AH AWD FFRHLQR+P L +LS+++ GL N D++ + A+QI PA RLRCLRL GN VG +GLR+LL ALTS+R RLPALW+RRQ P ++E AR + AF++GL AEVEFERP + GGRS L ++E T E +DLGR + K TSHIY+
Sbjct: 25 AHLAYYLGLYDEAEASIERALELGHEEDGSMQLRLARMHVRREKADSANAERHLRSALASYSEAMKFVRVASEAVHYLEVTSVYLKLNETQRAANALSTVLVRWPALLVDAENDGHGSVPVIEGDRAEVDLPVASNVLGGESIFLQMGFCFETLRQDKMAAEAYRQAWNTLLEQRHASAAPAGYGAVFAKTAKSGGGKEVGVVGVDEIGAILRQAQLALAASSRSTSAAGGRSRDSTPEQQLQRSKGTSSTERRPPSSGQQPDQQGVGGGRGGVPSSLPSTADSSCLGRGGGRGDHGDSSCGVTKKETVVDAAKARALGFELWCKNPYTWFSFGEVVLEGGCYALTLAFLAKAVALLPSGLHQQEKGRFGDAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQYTRESQSALRVQRAWRGHRVIRVLHDLVSKQTAALRIQRFMREWRKHGFILALRLVATSALELSKLGAKYTKAMGLAAQAAAADRLQALTASAEAVQRAARVLIAHRRVSRRKEAIAALQAFCRGCRLRWALSAAFEESLRLEYVAHDLRQQRDCGDGGREEGAYTCEEGVEPGPDREGVGNTDREGKRGPSAAPLRPRHGDGCKPHKEEAFAGYNAPLNV-QLGVIARRNFPMDAGCAKGFRPPNLAAFLWESREEAYGSCCADDGTD--DNPTLLVPHLGNETESPRSYVDSAARSSHGDDGAVFEASATAVASSA-----CREDPVRMGSEQNEVDLGDCSPDQHGGGRPPAFDELPASPVSPLPLLQPPRWVPATVAPEGAFHRALACSTLIVNSPSFDSSSARRLFSRMGKPIPAASPPRDEPQQEADDVKGMAAGVRRGKADLNPTHGEEKEKRRLKKHPGCLHAN------GLKHVLLVGESPIGDGGLSELSSAVRC-GWLPRLTTLVIGGPGCKVGPRGVAALATALSTSGCSQLQHLSMSNCCLGRQKQXXXXXXXGCKTSLLNPASVSAEKAAAEAHAAWDCFFRHLQRLPSLATLSIQDAGLENRDVRSLSIALQILPADRLRCLRLNGNCVGESGLRMLLTALTSRRRRLPALWLRRQRPALVESGARDIFEGAFRDGLFAEVEFERPFEVMGGRSHLALIECTTETEDLGRRALKHPTSHIYI 1153
BLAST of mRNA_H-paniculata_contig91.16933.1 vs. uniprot
Match: A0A6H5JP04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP04_9PHAE) HSP 1 Score: 659 bits (1699), Expect = 6.440e-215 Identity = 486/1245 (39.04%), Postives = 627/1245 (50.36%), Query Frame = 1
Query: 1 ANLEYFLGLYDEAERRSTRAFELGHQDDGSMWLRVARMFVRRYTAHPSNS-RCLPAALEAFSEAFKFKRIDSRPIHHLEMTSVYLKMNETQKAAQILAMIMQRWPVSSVPQDNTAHRH----GDDRAEVELPVPGLILGSVSVFLQ--------------------------------MGMCYDNLGRARMANEAYKQVWNTLLEQR------------------DKDLARDAGDSLFPVT-NDDDGKATGC---DELGNILRRARATLGIVSSATSWSTNASNEPAAHSNCHQIGTLRCRRTSPGGVPTAGRSSNDRFNPLPTEAKLFTPPRSRGDVGSASRAAAEEKAVRDLAFELWYKDPYTWFRFGQVLLNGGCHSLALTILDKAVGLLPRGLIKQEQGRFGEAYYAAKEARDLEPFGKGVRRLCPRLMALHSEDDRAQ--YIVESLAAARLQRGWREHRIVRTLKEAVRTQIAALRIQRFMRHWKQCNRWISLRLVVASAMELSGVL---------------------ATCAG-------------GMGQAARAASEQRLNELARSAFLVQRSCRVFLAQSEVSRRRKAIVTLQAMFRGCERRWEVAAAL--------------QLRYCPS---RENTHATKAG------------NNKKWTSHLSSTA-----------------------NVLRVGVLTRRNAPMDKDCATGCGSANRAAFLWET-----GSYTCADDSA------------KYRDSPSAHGGSTNGDHSDESINKDGAVFELCAIAGYSTANDSRETRDHRPRRSDADESWKMSDISQKSH-----------PA------PSMQ--QWITPAVAPEAALTQALRCSILVVSSPSFNSASACRLLSRLGLPINNTQAPISSDHSPITAEKQDAGTTLYGQKHGNWCHTEPVATRNGLLDGASVHETLETQGENITHLLVHGASPLGDTGLSVLSSAMRSVDTLSRLTTLVIGGHGCRVGTRGITALGKALSSPNCPRLRCLSLSNCCLGRQRYN----------------SKITPAAAAAAHEAWDVFFRHLQRMP-LLSLSLENCGLGNADIQCAANAIQIFPAGRLRCLRLGGNRVGATGLRILLRALTSKRMRLPALWVRRQHPPIIEHDARGVICRAFKEGLLAEV---------------------------EFERPRQEEGGRSRLEIVEHTAELDDLGRCSRKGSTSHIYV 3054
A+L Y+LGLYDEAE RA ELGH++DGSM LR+ARM VRR A +++ R L +AL ++SEA KF R+ S IH+LE+TSVYLK+NETQ+AA L+ ++ RWP V +N H DRAEV+LPV +LG S+FLQ MG+C++ L + +MA EAY+Q WNTLLEQR D R ++F T GK G DE+G ILR+A+ L S +TS + S + + G + +T + A++A A L FELW K+PYTWF +G+V+L GGC++L L L KAV LLP GL++QE+GRFG+A+ AA+EARDL+PFGK VR LCPRLMALHS D R Q Y ES +A R+QR WR HR++R L++ V QIAA RIQRFMR W++ ++LRL SA+EL V+ AT A MG A+AA+ RL LA SA VQR+ R +A VSRR++AI LQA FRGC RW ++AA Q R C E H + G +++ LS+T+ NV ++GV+TRRN PMD CA G N AAFLWE+ GS CADD A K ++SP ++ + + S D AVF A A S+A R+ R + D H PA P +Q +W+ VAPE A +AL CS L+VSSPSF+SASA RL SR+G P+ P K A GQ N H E + L+ H T + H+L+ G SP+GD GLS LSSA+R L RLTTLVIGG GC+VG RG+ AL ALS+ C +L+ LS+SNCCLGR + S AAA AH AWD FFRHLQR+P L +LS+++ GL N D++ + A+QI PA RLRCLRL GN VG +GLR+LL AL S+R RLPALW+RRQ P ++E AR + RAF++GL AEV EFERP + GGRS L ++E T E +DLGR + K TSHIY+
Sbjct: 25 AHLAYYLGLYDEAEASIERALELGHEEDGSMQLRLARMHVRREKADSASAERHLRSALASYSEAMKFVRVASEAIHYLEVTSVYLKLNETQRAANALSTVLLRWPALLVDTENDGHGSVPVIEGDRAEVDLPVASYVLGGESIFLQARLTKLASRTRYSLFESEPHRYRIRRSVTPNAMGLCFETLRQDKMAAEAYRQAWNTLLEQRHASAAPAGQKPXXXXXTGDPSKTRTGYGAVFAKTAKSGGGKEVGVVRVDEIGAILRQAQLALAASSRSTSAAGGRSRDSTPEQQLQRSGGVTKNKT----------------------------------IVDAAKARA-------LGFELWCKNPYTWFNYGEVVLEGGCYALTLAFLAKAVALLPSGLLQQEKGRFGDAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQARYTRESQSALRVQRAWRGHRVIRVLRDLVSKQIAAFRIQRFMREWRKHGFILALRLAAISALELRQVVRRRRSRSWVWHERRAAWVDGEATLARIHAPPKLGTNYTKAMGLTAQAAAADRLQALAASAEAVQRAARALIAHRRVSRRKEAIAALQAFFRGCRLRWALSAAFEESLRIESVARDLRQQRDCGDGGREEGAHTCEEGVKPGLDPEGVGNTDREGKRGLSATSLRPRHGDGCKPHKDTFGGYNAPPNV-QLGVITRRNLPMDVSCAKGFRPPNLAAFLWESREDAYGS-RCADDGADDNTALLAPHLGKEKESPRSY---VDAAVARSSHGHDHAVFVASATAVASSA-----CREDLARMGSEQNEVDLGDCLSDQHGGGRPPAFDELPASPVSALPLLQPPRWVPATVAPEGAFHRALACSTLIVSSPSFDSASARRLFSRMGKPMPAASPPRDEPQQETDDVKGMAAGVRRGQVDLNLTHGEE---KERLIK----HPTGCLYANGLEHILLLGESPIGDGGLSELSSAVRC-GWLPRLTTLVIGGPGCKVGPRGVAALATALSTSGCSQLQHLSMSNCCLGRPKGRRXXXXXXXXXXXSNLASVSAEKAAAEAHAAWDCFFRHLQRLPSLATLSIQDAGLENRDVRSLSIALQILPADRLRCLRLNGNCVGESGLRMLLTALRSRRRRLPALWLRRQRPALVESGAREIFERAFRDGLFAEVKRVPHPMNIERIEGKFRAANRNTWWLVEFERPFEVMGGRSHLALIERTTETEDLGRRALKHPTSHIYI 1210 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig91.16933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig91.16933.1 >prot_H-paniculata_contig91.16933.1 ID=prot_H-paniculata_contig91.16933.1|Name=mRNA_H-paniculata_contig91.16933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=989bp MWLRVARMFVRRYTAHPSNSRCLPAALEAFSEAFKFKRIDSRPIHHLEMTback to top mRNA from alignment at H-paniculata_contig91:16628..26353+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig91.16933.1 ID=mRNA_H-paniculata_contig91.16933.1|Name=mRNA_H-paniculata_contig91.16933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9726bp|location=Sequence derived from alignment at H-paniculata_contig91:16628..26353+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig91:16628..26353+ >mRNA_H-paniculata_contig91.16933.1 ID=mRNA_H-paniculata_contig91.16933.1|Name=mRNA_H-paniculata_contig91.16933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5934bp|location=Sequence derived from alignment at H-paniculata_contig91:16628..26353+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |