mRNA_H-paniculata_contig91.16932.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Match: D7FW08_ECTSI (Proteasome subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW08_ECTSI) HSP 1 Score: 444 bits (1143), Expect = 1.500e-152 Identity = 226/251 (90.04%), Postives = 236/251 (94.02%), Query Frame = 3
Query: 192 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDSRTIRKIVKLDSHITLAFAGLTADARVLIDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSPDGQPQIYQTDPAGTHSAWKANAIGGNNSNNMREFLEKNWANEMDEAGAIKLCMKALLEVVDSGAKNMEIAIVRFEKPIEMMTEEAMSTWAKEIEAEAEESKENASGDVEMT 944
MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQD RTIRKIVK+DSHITLAFAGLTADARVL+DKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFS DG PQIYQTDPAGT+SAWKANAIGG+NSNNMREFLEKNWAN+MDE A KLCMKALLEVVDSGAKNMEIAIVRF K EMMTEE M A E+EAEAEE+KE ++GDV+MT
Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAGDVQMT 251
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Match: A0A835Z7L7_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L7_9STRA) HSP 1 Score: 377 bits (969), Expect = 3.740e-126 Identity = 191/253 (75.49%), Postives = 220/253 (86.96%), Query Frame = 3
Query: 192 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDSRTIRKIVKLDSHITLAFAGLTADARVLIDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSPDGQPQIYQTDPAGTHSAWKANAIGGNNSNNMREFLEKNWANE--MDEAGAIKLCMKALLEVVDSGAKNMEIAIVRFEKPIEMMTEEAMSTWAKEIEAEAEESKENASGDVEMT 944
MA+ YDRAITVFSPDGHLFQVEYAIEAVKRGSSVV V+ D +V+GVERRATAKLQD RTIRKIVK+D+H+TLAFAGLTADARVLIDKARLE QSYRLTCEDAPS+EY+ARFIARTQQ+YTQRGGMRPFGVS +LAGF DGQPQ+YQTDPAGTHSAWKANAIGG +S NMREFLEKN+ E +DEA A+KLC+K LLEVVDSGAKNMEI ++R + P+E M++ M+ +IEAEAEE+K+ ++G T
Sbjct: 1 MAASYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVGVRAADMLVVGVERRATAKLQDPRTIRKIVKVDAHLTLAFAGLTADARVLIDKARLEAQSYRLTCEDAPSLEYMARFIARTQQKYTQRGGMRPFGVSCMLAGFGTDGQPQLYQTDPAGTHSAWKANAIGGKSSKNMREFLEKNYPTEGGLDEAAAVKLCIKTLLEVVDSGAKNMEICLIRRDTPVETMSDTDMAAVVAQIEAEAEEAKKASAGSSMET 253
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Match: A0A6S9E6K7_HETAK (Proteasome subunit alpha type n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E6K7_HETAK) HSP 1 Score: 377 bits (968), Expect = 4.600e-126 Identity = 186/247 (75.30%), Postives = 213/247 (86.23%), Query Frame = 3
Query: 204 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDSRTIRKIVKLDSHITLAFAGLTADARVLIDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSPDGQPQIYQTDPAGTHSAWKANAIGGNNSNNMREFLEKNWANEMDEAGAIKLCMKALLEVVDSGAKNMEIAIVRFEKPIEMMTEEAMSTWAKEIEAEAEESKENASGDVEMT 944
YDRAITVFSPDGHLFQVEYA+EAVKRGSSVV ++GKDCV+LGVER++TAKLQDSRT+RKI K+D+H+TLAFAGLTADARVL++KARLECQSYRLTCEDAPS+EYVARF+ARTQQ+YTQRGGMRPFGVS +LAG DG PQ+YQTDPAGT+SAWK N IGG NS +M+EFLEKNW +MD A KL +K LLEVVDSGAKNME+ +VR +P EMMTEEAMS A EIEAEAEE+K E +
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVKRGSSVVGIRGKDCVILGVERKSTAKLQDSRTVRKICKVDNHLTLAFAGLTADARVLVNKARLECQSYRLTCEDAPSVEYVARFVARTQQKYTQRGGMRPFGVSVMLAGHGVDGAPQLYQTDPAGTYSAWKGNCIGGKNSKSMQEFLEKNWEEDMDAPAAKKLAIKCLLEVVDSGAKNMEVCVVRRGQPNEMMTEEAMSAVAAEIEAEAEEAKAGTGAGEEKS 249
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Match: W7TRL4_9STRA (Proteasome subunit alpha type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL4_9STRA) HSP 1 Score: 358 bits (918), Expect = 1.910e-118 Identity = 174/245 (71.02%), Postives = 212/245 (86.53%), Query Frame = 3
Query: 192 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDSRTIRKIVKLDSHITLAFAGLTADARVLIDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSPDGQPQIYQTDPAGTHSAWKANAIGGNNSNNMREFLEKNWANEMDEAGAIKLCMKALLEVVDSGAKNMEIAIVRFEKPIEMMTEEAMSTWAKEIEAEAEESKENAS 926
MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSS V V+GK V+LGVERRATAKLQD RTI+KI K+D H+TLAFAGLTADARVL++KARLECQSYRLT EDAP++EYVAR+IARTQQ+YTQRGG+RPFGVS ++AG +PDG +YQTDPAGT+SAWKA A+GG NS+NM+E+LEK WA++++E AI+L +K LLEVVDSGAKNME+A++ +P+ M+ E ++ + IEAE EE+K+ AS
Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKAS 245
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Match: A0A7S1FT14_9STRA (Proteasome subunit alpha type n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FT14_9STRA) HSP 1 Score: 342 bits (877), Expect = 2.230e-112 Identity = 169/245 (68.98%), Postives = 205/245 (83.67%), Query Frame = 3
Query: 204 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDSRTIRKIVKLDSHITLAFAGLTADARVLIDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSPDGQPQIYQTDPAGTHSAWKANAIGGNNSNNMREFLEKNWANEMDEAGAIKLCMKALLEVVDSGAKNMEIAIVRFEKPIEMMTEEAMSTWAKEIEAEAEESKENASGDVE 938
YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V ++ D V+L VERRATA+LQDSRTIRKIV +D H+ LAFAGLTADARVL++KAR+ECQSYRLTCEDAPSIEY+AR+IARTQQ+YTQRGG+RPFG++++LAGFS G P +YQTDPAGT+S+WKANA+GG N+ +MREFLEKN + M E A+KL +KALLEVVDSGAKNMEI++ R + ++ EE + KEIEAEAEESK + E
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVRRGSATVGIRASDAVILAVERRATARLQDSRTIRKIVSVDDHVRLAFAGLTADARVLVNKARVECQSYRLTCEDAPSIEYIARYIARTQQKYTQRGGVRPFGITTLLAGFSQSGSPCLYQTDPAGTYSSWKANAVGGRNAKSMREFLEKNCDDSMSETDAVKLAVKALLEVVDSGAKNMEISVSRKNSSV-ILEEEVVDKIVKEIEAEAEESKTGSESKGE 246
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Match: A0A7S2F6I3_9STRA (Proteasome subunit alpha type n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F6I3_9STRA) HSP 1 Score: 342 bits (876), Expect = 6.110e-112 Identity = 174/247 (70.45%), Postives = 205/247 (83.00%), Query Frame = 3
Query: 204 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDSRTIRKIVKLDSHITLAFAGLTADARVLIDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSPDGQPQIYQTDPAGTHSAWKANAIGGNNSNNMREFLEKNWANEMDEAGAIKLCMKALLEVVDSGAKNMEIAIVRFEKPIEMMTEEAMSTWAKEIEAEAEESKENASG-DVEM 941
YDRAITVFSPDG LFQ++YA EAVK+ S+VV V G++ VV+GVER+A AKLQ+SRTIRKIVKLDSH TLAFAGLTADARVLI+KAR ECQSYRLTCEDAPS+EY+ARFIA+TQQRYTQRGG+RPFGVSSILAGF DG P IYQ DP+GT+ AWKANAIGG N MREFLEK W +++EA A+KL +KALLEVVDSG+KNME+ +VR E + +EA++ E+EAE EE+K A+ D EM
Sbjct: 17 YDRAITVFSPDGKLFQIDYAFEAVKKASAVVAVTGENVVVIGVERKAIAKLQESRTIRKIVKLDSHATLAFAGLTADARVLIEKARTECQSYRLTCEDAPSLEYIARFIAKTQQRYTQRGGVRPFGVSSILAGFHTDGSPSIYQIDPSGTYFAWKANAIGGRNFKPMREFLEKEWVPDLEEAQALKLTVKALLEVVDSGSKNMEVVVVRRGAGPETLDDEALTAIVTEVEAEQEEAKVAATTEDAEM 263
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Match: A0A7S3M1D5_9STRA (Proteasome subunit alpha type n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1D5_9STRA) HSP 1 Score: 338 bits (866), Expect = 1.390e-110 Identity = 166/242 (68.60%), Postives = 205/242 (84.71%), Query Frame = 3
Query: 204 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDSRTIRKIVKLDSHITLAFAGLTADARVLIDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSPDGQPQIYQTDPAGTHSAWKANAIGGNNSNNMREFLEKNWANEMDEAGAIKLCMKALLEVVDSGAKNMEIAIVRFEKPIEMMTEEAMSTWAKEIEAEAEESKENASG 929
YDRAITVFSPDGHLFQVEYA+EAVKRGS+VV V+G D VVLGVER+A A+LQD+RTIRKI KLD ++T+AFAG TADARVLI+KAR+E QSYRLTCEDAPSI+Y+AR IA+TQQ YTQRGG+RPFGVSS+++GF+ D PQ+Y TDPAGT+SAWKANAIGG N ++EFLEKNW + EA AI+L +KALLEVVDSG+KNME+A+ R+ +P+ ++ EE + +IE E EE+K+ A+G
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVKRGSAVVGVRGADSVVLGVERKAVAQLQDARTIRKIAKLDENLTIAFAGFTADARVLIEKARIEAQSYRLTCEDAPSIDYMARHIAKTQQSYTQRGGVRPFGVSSMISGFNADKSPQLYLTDPAGTYSAWKANAIGGRNEKAVQEFLEKNWTASLAEADAIRLTVKALLEVVDSGSKNMELAVSRYGQPVRILKEEELEVIIADIEREIEEAKKEAAG 244
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Match: A0A7S2EX89_TRICV (Proteasome subunit alpha type n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EX89_TRICV) HSP 1 Score: 338 bits (866), Expect = 1.600e-110 Identity = 172/253 (67.98%), Postives = 203/253 (80.24%), Query Frame = 3
Query: 204 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDSRTIRKIVKLDSHITLAFAGLTADARVLIDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSPDGQ-----------PQIYQTDPAGTHSAWKANAIGGNNSNNMREFLEKNWANEMDEAGAIKLCMKALLEVVDSGAKNMEIAIVRFEKPIEMMTEEAMSTWAKEIEAEAEESKENASG 929
YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V V+GKDCVVL VERRA AKLQD RTIRKIV +D TLAFAGLTADARVL++KAR+ECQSYRLTCEDAPS+EYVAR++ARTQQ+YTQRGG+RPFG++++LAGFS Q P +YQTDPAGTHS+WKA IGG N+ ++REFLEKN+ + MDE G +KL ++ALLEVVDSGAKNMEI +VR E M E A+ KEIEAE EE K ++G
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLVNKARVECQSYRLTCEDAPSVEYVARYLARTQQKYTQRGGVRPFGIATLLAGFSDPVQGKEDEEDGGSGPVLYQTDPAGTHSSWKAQVIGGRNAKSLREFLEKNYEDGMDEGGCVKLSVRALLEVVDSGAKNMEICVVRRGGVRETMEESAVDAVVKEIEAEQEEGKRGSTG 255
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Match: A0A7S2RQS1_9STRA (Proteasome subunit alpha type n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQS1_9STRA) HSP 1 Score: 337 bits (863), Expect = 4.370e-110 Identity = 165/239 (69.04%), Postives = 197/239 (82.43%), Query Frame = 3
Query: 198 SRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDSRTIRKIVKLDSHITLAFAGLTADARVLIDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSPDGQPQIYQTDPAGTHSAWKANAIGGNNSNNMREFLEKNWANEMDEAGAIKLCMKALLEVVDSGAKNMEIAIVRFEKPIEMMTEEAMSTWAKEIEAEAEESK 914
+RYDRAITVFSPDG LFQ++YA EAVK+ S+VV V+ D V+LGVER+ AKLQD RTIRKIVKLD+H TLAFAGL ADARVLI+K R+ECQSYRLTCEDAPS+EY+ARFIARTQQRYTQRGG+RPFGVSSILAGF+ DG PQIYQ DP+GT+ WKANAIGG N MREFLEK W + +A A KL +KALLEVVDSG+KNME+ ++R +P M++E++ ++EAE EE+K
Sbjct: 2 ARYDRAITVFSPDGKLFQIDYAFEAVKKASAVVAVRAADTVILGVERKTIAKLQDPRTIRKIVKLDTHATLAFAGLNADARVLIEKTRIECQSYRLTCEDAPSLEYIARFIARTQQRYTQRGGVRPFGVSSILAGFNTDGAPQIYQIDPSGTYFGWKANAIGGRNFKGMREFLEKEWQEGLSQAEATKLTVKALLEVVDSGSKNMELVVIRRGEPAATMSDESVQAVVDQVEAEMEEAK 240
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Match: A0A6U2BRH1_9STRA (Proteasome subunit alpha type n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U2BRH1_9STRA) HSP 1 Score: 335 bits (858), Expect = 2.160e-109 Identity = 173/251 (68.92%), Postives = 204/251 (81.27%), Query Frame = 3
Query: 204 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDSRTIRKIVKLDSHITLAFAGLTADARVLIDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSP------DGQPQIYQTDPAGTHSAWKANAIGGNNSNNMREFLEKNWANEMDEAGAIKLCMKALLEVVDSGAKNMEIAIVRFEKPIEMMTEEAMSTWAKEIEAEAEESKE--NASGD 932
YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V V+GKDCVVL VERRA AKLQD RTIRKIV +D TLAFAGLTADARVLI+K R+E QSYRLTCEDAPS+EY+AR+IARTQQ+YTQRGG+RPFG++++LAGFS D +P +YQTDPAGTHS+WKA IGG N+ ++REFLEKN+ ++M+E IKL ++ALLEVVDSGAKNMEI +VR EMM E + KEIE EAEE K +ASGD
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLINKTRVEAQSYRLTCEDAPSVEYMARYIARTQQKYTQRGGVRPFGIATLLAGFSDPEHGKSDAKPVLYQTDPAGTHSSWKAQVIGGRNAKSLREFLEKNYEDDMEEDACIKLGIRALLEVVDSGAKNMEICVVRAGGKREMMEESGVDKIVKEIEEEAEEGKRGSSASGD 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig91.16932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig91.16932.1 >prot_H-paniculata_contig91.16932.1 ID=prot_H-paniculata_contig91.16932.1|Name=mRNA_H-paniculata_contig91.16932.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRback to top mRNA from alignment at H-paniculata_contig91:6627..15422- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig91.16932.1 ID=mRNA_H-paniculata_contig91.16932.1|Name=mRNA_H-paniculata_contig91.16932.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8796bp|location=Sequence derived from alignment at H-paniculata_contig91:6627..15422- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig91:6627..15422- >mRNA_H-paniculata_contig91.16932.1 ID=mRNA_H-paniculata_contig91.16932.1|Name=mRNA_H-paniculata_contig91.16932.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1512bp|location=Sequence derived from alignment at H-paniculata_contig91:6627..15422- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |