mRNA_H-paniculata_contig91.16931.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig91.16931.1 vs. uniprot
Match: D7FW07_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW07_ECTSI) HSP 1 Score: 527 bits (1358), Expect = 1.040e-171 Identity = 342/706 (48.44%), Postives = 401/706 (56.80%), Query Frame = 1
Query: 1219 LGQGLHNPSAVTNCLTEAEGLMSGSAAGG--MPRSLPLSTIYQVLGTRIASELDLAYWHVRYTASTRYGAGGVAAN---SPCQIVPPPEVYFLCLASHLPSAAELRASPGL-KNLALRAMLADVFDLPVG-LGQHVGKSRS---DGGTGVDEIEFPVLSNPLLAVTQSAWLETAMLADAKSWVSHFPLRFGEPEGSMRGSDPALPVPIRARCDAVRDWSARLLAFAVPNRLAVDACRRALKACG--------GTASAIVEVGAGLGYWKWVLEGSGTGDSDRIGCEGPRKGGGNDGDVPNSDVSPEASSRGSKQQRTGARATPSRVERGRPVGARTSKAESADVV--LRVLAIDKDAAQLPIPDGDNLFATVETL----------------GRTGGGLERRQQGGQGACSRRGRGKSGKVWRGDSVRSPQAVQAVTAATAFPNNEYHGGAPAWAVVETGGPERLRSVKADAYPVLLLCYPPPSIG-GAGDAAAAACMGANALATFSGKVLLYVGEVGGDTGSPRLEAMLQAEWDLVEAVELPCYSSTANQLMVFVRKGVSLKHGSVIITSATMPRH--------------------------------LPLYRCSSCVCSPRGTGAQL-HRCRLTRAVSYCSERCFSGDLARWQANLEARHIYLPIGAAGGLVGAGEIGPSNFGGGSDRFAQSRRAIRDKKIFKRL 3126
LG LH+P AV CL+ AE L+SG G MP SL S+IY+ LGT IASELDLAYWH RYTA++R+ AGGVAA+ S Q+VPPPEVYF+ LA H+P+ E+RAS L N ALR +L DVFDLPVG G +RS +G EI FPVL NPLLAV QSAWLETA+ A AKSWV HFP RFG+ EG+MRGSDP LP PIR RCDA RDWSARL AFAVPNR A+DAC+RAL ACG + IVEVGAGLGYWKWVLEG G P + RG T V RT A L+ LAIDKD +++P G + + GR GG R++G +G G+ G S R +NEYHGGAPAWAVVE GGPE+LR++ A AYPVLLLCYPPPS+G G G A+ CMGA+ALA FSGKVLLY+GEVGGDTGSPR EA L+A WDLVE VELPC+SSTAN+LMVF RKG G V ++A + + +YRCS C G L HRCRLTR+VS+CSE+C + D RW+ANLEARH++L G A L A + G FGG RDKK+FKRL
Sbjct: 4 LGGALHDPPAVARCLSAAEALLSGDTGGRWVMPDSLRSSSIYKALGTGIASELDLAYWHARYTAASRFDAGGVAADTESSSHQVVPPPEVYFVGLAFHVPAVTEVRASAVLDNNPALRRVLVDVFDLPVGDAGAQRHATRSLPPSSSSGGGEIRFPVLENPLLAVAQSAWLETAVCASAKSWVPHFPPRFGDNEGTMRGSDPGLPPPIRLRCDATRDWSARLFAFAVPNRRALDACKRALDACGVGGXXXXXXXSGGIVEVGAGLGYWKWVLEGLG----------------------------PFPNGRGXXXXXXXXXXTSRGVSLHLGKAGRTLSGGDAKEAPPLKFLAIDKDPSRVPGGTGVSAASXXXXXXXXXXXXXXXXXXXXXGRRGGNKRTRREGSRG----------GRHGEGQSERPT-------------HNEYHGGAPAWAVVEQGGPEQLRALSAAAYPVLLLCYPPPSVGVGTG---ASGCMGADALARFSGKVLLYIGEVGGDTGSPRFEAALRAGWDLVEEVELPCFSSTANRLMVFARKGAFSSGGGVSASTAGSGKKRKDAGAAAARLDTPGKDACPTGDAGGXXXXXGMAMYRCSGCGAKAAAEGGVLLHRCRLTRSVSFCSEKCLTLDAERWRANLEARHVHLAPGTAVEL--ANQSG--KFGG----------VFRDKKLFKRL 641
BLAST of mRNA_H-paniculata_contig91.16931.1 vs. uniprot
Match: A0A836CJJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ1_9STRA) HSP 1 Score: 176 bits (445), Expect = 7.150e-42 Identity = 226/810 (27.90%), Postives = 283/810 (34.94%), Query Frame = 1
Query: 916 SCGHLSVAHELVDAQEEDAGKSPQFRRSIDGRQKKRQAERAQVMSRGGGLRRLFADIRNARAVGASSLFEDSEGVCG-WGTGWFLSMHARRYLKQAREVIAELGQGLHNPSAVTNCLTEAEGLMSGSAAGGMPRSLPL------------------------------STIYQVLGTRIASELDLAYWHVRYTASTRYGAGG----------------VAANSPCQIVPPPEVYFLCLASHLPSAAE----LRASPGLKNLALRAMLADVFDLPVGLGQHVGKSRSDGGTGVDEIEFPVLSNPLLAVTQSAWLETAMLADAKSWVSHFPLRFGEPEGSMRGSDPALPVPIRARCDAVRDWSARLLAFAVPNRLAVDACRRALKAC---------------GGTASAIVEVGAGLGYWKWVL-----EGSGTG-DSDRIGCEGPRKGGGNDGDVPNSDVSPEASSRGSKQ-------------QRTGARATPSRVERGRPVGARTSKAESADVVLRVLAIDKDAAQLPIPDGDNLFATVETLGRTGGGLERRQQGGQGACSRRGRGKSGKVWRGDSVRSPQAVQAVTAATAFPNNEYHGGAPAWAVVETGGPERLRSVKADAYPVLLLCYPPPSIGGAGDAAAAACMGANALATFSGKVLLYVGEVGGDTGSPRLEAMLQAEW-DLVEAVELPCYSSTANQLMVFVRK-----------------GVSLKHGSVIITSATMPRHLPLYRCSSCVCSPRGTGAQLHRCRLTRAVSYCSERCFSGDLARWQANLEARHIYLPIGAA-GGLVGA 3033
SCGH + AH L A +P AQ+ LR FA +RNARA G +D+ G G W GW + ++ + A +V+ + G G CL AA P LPL +T+ G +A+ELD YWH+RY A T A A+ IVPPPEVYF CL+ H+ S A+ L+AS G L L DL + GG G ++ WLE + A W PL EG+MRGSDP LP +R RCD++RDW+ARL+AFAVPN A+ R A GG ++A+VEVGAGLGYWKW S T D D G R P + G S VERG T +A P P+G T+G G G C+ R RG GK + A+V++ P R V+A A+AL F+G ++Y GE GGDTG+P LEA L A W VELP + +TA LMVF R GV + S VC + TG L RCR TRA YCSE C D R Q RH+ P G A GG GA
Sbjct: 37 SCGHRAAAHPLQPGAPPGATVAPA----------------AQL------LRDAFASLRNARAAG-----DDATGEGGRWAGGW-ATPRVQQGVASAADVLHDGGSGAAAAIQRAQCL----------AASAQPLLLPLXXXXXXXXXXXXXXXXXXXPLLLALPEGAAATVMPQAGLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHLKATMDLDL----------QGGGKG-----------------KATWLEMEVAAGYGQWSGGLPLTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRMSYTAYDKDPPPLPGAR--------APXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGG-----TERAXXXXXXXXXXXXXXLFLCYPPPEG--------TMGIAPHG---------GCCAYRDRGAGGKRFLSTVXXXXXXXXXXXXXXXXXXX---------AIVKSPTPPRSHPVRAPTTQT-----------------------ADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVELPAFPNTAACLMVFRRXXXXXXXXXXXXXXXXXAGVVRAFAAAPAAXXXXXXXXXXXXXSCAVC--KATGQGLRRCRRTRAACYCSEACRKTDETRLQVLQLVRHVRAPAGVAVGGSGGA 717
BLAST of mRNA_H-paniculata_contig91.16931.1 vs. uniprot
Match: A0A0L0G853_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G853_9EUKA) HSP 1 Score: 166 bits (420), Expect = 9.490e-39 Identity = 117/319 (36.68%), Postives = 166/319 (52.04%), Query Frame = 1
Query: 1072 LFADIRNARAVGASSLFEDSEGVCGWGTGWFLSMHA------RRYLKQAREV--IAELGQGLHNPSAVTNCLTEAEGLMSG-SAAGGMPRSLP-----LSTIYQVLGTRIASELDLAYWHVRYTASTRYGAGGVAANSPCQIVPPPEVYFLCLASHLPSAAELRASPGLKNLALRAMLADVFDLPVGLGQHVGKSRSDGGTGVDEIEFPVLSNPLLAVTQSAWLETAMLADAKSWVSHFPLRFG-EPEGSMRGSDPALPVPIRARCDAVRDWSARLLAFAVPNRLAVDACRRALKACGGTASAIVEVGAGLGYWKWVLE 1983
LF +RNAR+ G ++ D +G GWG+GW L A ++ L +A E+ + + + LH+ V L A+ ++ A +P + + Q G +A+ELD YWH+ Y+A T + + P ++PPPEVYF CL +H P E+ + + ++R L D D+ + D TG E + SNPLLA Q W+E + A ++SWV +FPL+ E +MRG DP LP PI RCD+VRDWSARL+AFAVPN A D + GT IVEVGAG+GYWK +
Sbjct: 171 LFVVVRNARSFG--NVGADVKGF-GWGSGWVLRRSASAHTTTKKCLSRALELCRLLQNEKDLHSAQTVIRHLQRAKNIVQNPDQAVPLPSKVKGGFGSVDFTAQARGVYVAAELDNVYWHILYSAQTNFHLLQGRSRLPA-VIPPPEVYFTCL-THTPPTKEMMETISITP-SIRKTLFDTMDM-----------KFDAVTG--EPAYCNTSNPLLAALQGTWIEMEICAQSRSWVGNFPLQDSPNAEKTMRGPDPLLPQPISLRCDSVRDWSARLMAFAVPNTRAYDVLSKF-----GT---IVEVGAGVGYWKHYFD 462
BLAST of mRNA_H-paniculata_contig91.16931.1 vs. uniprot
Match: A0A7S4PVP8_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PVP8_9DINO) HSP 1 Score: 71.6 bits (174), Expect = 4.700e-9 Identity = 67/215 (31.16%), Postives = 90/215 (41.86%), Query Frame = 1
Query: 1369 LDLAYWHVRYTASTRYGAGGVAANSPCQIVPPPEVYFLCLASHLPSAAELRASPGLKNL-------ALRAMLADVFDLPVGLGQHVGKSRSDGGTGVDEIEFPVLSNPLLAVTQSAWLETAMLADAKSWVSHFPLRFGE-PE---GSMRGSDPALPVPIRARCDAVRDWSARLLAFAVPNRLAVDACRRALKACGGTASAIVEVGAGLGYWKWVL 1980
LD AY + Y A+ GG A + VPPP YF A+ +S ++ A R + + DLP G+ G G D NPLL + Q+ W E + V P E PE +M+G DP ++ DA R W+ L A+AVPN AV+ RR S +VE+GAG GYW W+L
Sbjct: 78 LDAAYHRLHYLATL---LGGDAEKA----VPPPHRYFADGAAGAWGPGGAASSDAVRRFLDQEAGPAGREVARRLLDLPEAGGR--------GAAGDD--------NPLLVLLQARWREAVVQLAGAGLVPASPEACCEGPEPNPSTMKGRDPLAAPAVQRWRDATRVWACHLYAYAVPNEAAVEVLRRY--------SPLVEIGAGTGYWAWLL 261
BLAST of mRNA_H-paniculata_contig91.16931.1 vs. uniprot
Match: A0A7S4PW50_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PW50_9DINO) HSP 1 Score: 71.6 bits (174), Expect = 4.760e-9 Identity = 67/215 (31.16%), Postives = 90/215 (41.86%), Query Frame = 1
Query: 1369 LDLAYWHVRYTASTRYGAGGVAANSPCQIVPPPEVYFLCLASHLPSAAELRASPGLKNL-------ALRAMLADVFDLPVGLGQHVGKSRSDGGTGVDEIEFPVLSNPLLAVTQSAWLETAMLADAKSWVSHFPLRFGE-PE---GSMRGSDPALPVPIRARCDAVRDWSARLLAFAVPNRLAVDACRRALKACGGTASAIVEVGAGLGYWKWVL 1980
LD AY + Y A+ GG A + VPPP YF A+ +S ++ A R + + DLP G+ G G D NPLL + Q+ W E + V P E PE +M+G DP ++ DA R W+ L A+AVPN AV+ RR S +VE+GAG GYW W+L
Sbjct: 78 LDAAYHRLHYLATL---LGGDAEKA----VPPPHRYFADGAAGAWGPGGAASSDAVRRFLDQEAGPAGREVARRLLDLPEAGGR--------GAAGDD--------NPLLVLLQARWREAVVQLAGAGLVPASPEACCEGPEPNPSTMKGRDPLAAPAVQRWRDATRVWACHLYAYAVPNEAAVEVLRRY--------SPLVEIGAGTGYWAWLL 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig91.16931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig91.16931.1 >prot_H-paniculata_contig91.16931.1 ID=prot_H-paniculata_contig91.16931.1|Name=mRNA_H-paniculata_contig91.16931.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1032bp MGRKRKVEALHSTLLPPALDRVDVGVKKKTEKKTPSASVTARSNNSSSRTback to top mRNA from alignment at H-paniculata_contig91:1753..6142+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig91.16931.1 ID=mRNA_H-paniculata_contig91.16931.1|Name=mRNA_H-paniculata_contig91.16931.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4390bp|location=Sequence derived from alignment at H-paniculata_contig91:1753..6142+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig91:1753..6142+ >mRNA_H-paniculata_contig91.16931.1 ID=mRNA_H-paniculata_contig91.16931.1|Name=mRNA_H-paniculata_contig91.16931.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6192bp|location=Sequence derived from alignment at H-paniculata_contig91:1753..6142+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |