mRNA_H-paniculata_contig9084.16917.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Match: D7FP44_ECTSI (Sirohydrochlorin ferrochelatase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP44_ECTSI) HSP 1 Score: 157 bits (398), Expect = 1.010e-46 Identity = 74/92 (80.43%), Postives = 82/92 (89.13%), Query Frame = 1
Query: 1 QAAHMELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRHPDVAWVVSEPLGLQELMPRVMHAAIEESIAAGSWHKG 276
+AAHMELAEP+IE+AFDRCVAAGA+K+VLHPFFLSPGRHV SDIPALM AA RHP V WVVSEPLGLQELMPRVMHAA+ ES+A G+W G
Sbjct: 122 EAAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPALMVAAAKRHPGVGWVVSEPLGLQELMPRVMHAAVSESVAGGAWRHG 213
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Match: A0A836CEJ2_9STRA (CbiX-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ2_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.160e-36 Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 1
Query: 1 QAAHMELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRHPDVAWVVSEPLGLQELMPRVMHAAIEESIAAGSWHKG 276
+ AHMELAEPTIEQAFD+CVAAGAK +VLHPFFLSPGRHV SDIP L+ AA RHP V W VSEPLGL LMP++M+ A+ ++ W G
Sbjct: 27 EVAHMELAEPTIEQAFDKCVAAGAKAVVLHPFFLSPGRHVSSDIPELLAAAASRHPGVKWKVSEPLGLAPLMPQLMNDAVAAALQEPEWQGG 118
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Match: A0A7G9NWY9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9NWY9_9BACT) HSP 1 Score: 105 bits (261), Expect = 1.010e-26 Identity = 49/82 (59.76%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 7 AHMELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRHPDVAWVVSEPLGLQELMPRVMHAAIEESI 252
AHMELAEPTIEQAFDRCV GAK +V HPFFL PG+H DIP L AA +HP + W+V+ P+G+ E MP VM+ AI+ +
Sbjct: 47 AHMELAEPTIEQAFDRCVQRGAKVVVCHPFFLLPGKHWNQDIPNLTAAAAGKHPGIRWMVTAPIGMNEKMPLVMNDAIDHCL 128
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Match: A0A518DNN6_9BACT (Sirohydrochlorin cobaltochelatase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DNN6_9BACT) HSP 1 Score: 100 bits (248), Expect = 4.710e-25 Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 7 AHMELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRHPDVAWVVSEPLGLQELMPRVMHAAIEESIAAGS 264
AHMELAEPT++ AFDRC+A GA++IV+HP+FL PG H DIP L AA R PDV +VV+EPLGL L+ +V+ I ++A S
Sbjct: 44 AHMELAEPTLQTAFDRCIARGAEQIVVHPYFLLPGNHSREDIPRLAAEAAARRPDVPYVVTEPLGLHPLLGQVIRDRIAAALAENS 129
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Match: UPI001C3CA215 (hypothetical protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3CA215) HSP 1 Score: 99.0 bits (245), Expect = 3.100e-24 Identity = 47/83 (56.63%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 7 AHMELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRHPDVAWVVSEPLGLQELMPRVMHAAIEESIA 255
AHMELAEP+I AFD CVA GA+ +V+ P+FL PGRH DIPAL++ AA RHP VA++V+ P GL LM V+ A +E +A
Sbjct: 47 AHMELAEPSISDAFDACVARGARTVVVSPYFLLPGRHWRQDIPALVEEAAARHPGVAYLVAAPFGLHPLMAEVVSARVEHCLA 129
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Match: A0A4D9D8W1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W1_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.830e-24 Identity = 51/94 (54.26%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 7 AHMELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRHPDVAWVVSEPLGLQELMPRVMHAAIEESIAAGSWHKGDRDD 288
AHMEL EP+I AF RCV GA I+ HPFFLS GRHV DIP L++ AA P V W +S+PLGLQ +PR+M A+EE IA + D D
Sbjct: 94 AHMELCEPSIATAFGRCVERGATFIICHPFFLSRGRHVAEDIPNLLEEAASIFPGVEWALSQPLGLQADIPRLMQQAVEECIAEKNIQSEDHAD 187
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Match: A0A350CGA9_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A350CGA9_9PLAN) HSP 1 Score: 97.1 bits (240), Expect = 9.310e-24 Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 7 AHMELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRHPDVAWVVSEPLGLQELMPRVMHAAIEESI 252
AHMELAEP+I+QAFDRCVA GA++IV+ P+FLSPGRH DIP L++ AA HP+V W+V+ P GL + + + + I+ S+
Sbjct: 45 AHMELAEPSIQQAFDRCVARGARRIVVFPWFLSPGRHWTEDIPGLVEQAAAVHPEVQWLVTPPFGLHQGLLQAVSERIDVSL 126
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Match: A0A518C237_9BACT (Sirohydrochlorin cobaltochelatase n=2 Tax=Bremerella TaxID=2714594 RepID=A0A518C237_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 1.040e-23 Identity = 47/83 (56.63%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 7 AHMELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRHPDVAWVVSEPLGLQELMPRVMHAAIEESIA 255
AHMEL EP+I QAF +CV GA +IV+HP+FLSPGRH DIP L Q AA HP + +V+ PLGL LM +VM IE +A
Sbjct: 48 AHMELVEPSIAQAFQKCVGQGATRIVVHPYFLSPGRHWHEDIPRLAQEAAANHPGITHLVTAPLGLHPLMAKVMQERIETCLA 130
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Match: E1Z3E3_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z3E3_CHLVA) HSP 1 Score: 97.4 bits (241), Expect = 1.180e-23 Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 1 QAAHMELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRHPDVAWVVSEPLGLQELMPRVMHAAIEESIAAGSWHKGDR 282
+ AHMELAEPTIEQA RC AAGA+++V+ P+FLS GRHV DIPAL AA HP V VV+EP+G+ LM +++ + + + G+ H R
Sbjct: 66 EVAHMELAEPTIEQAVGRCAAAGARRVVVAPYFLSRGRHVQQDIPALAAAAAAAHPSVECVVAEPIGIDSLMAQLIESRVRAA-EGGAAHDHSR 158
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Match: W7TSP7_9STRA (Cobalamin (Vitamin B12) biosynthesis CbiX n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSP7_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.450e-23 Identity = 51/94 (54.26%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 7 AHMELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRHPDVAWVVSEPLGLQELMPRVMHAAIEESIAAGSWHKGDRDD 288
AHMEL EP+I AF RCV GA I+ HPFFLS GRHV DIP L++ AA P V W +S+PLGLQ +PR+M A+EE IA + D D
Sbjct: 155 AHMELCEPSIATAFGRCVERGATFIICHPFFLSRGRHVAEDIPNLLEEAASIFPGVEWALSQPLGLQADIPRLMQQAVEECIAEKNIQSEDHAD 248 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9084.16917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9084.16917.1 >prot_H-paniculata_contig9084.16917.1 ID=prot_H-paniculata_contig9084.16917.1|Name=mRNA_H-paniculata_contig9084.16917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp MELAEPTIEQAFDRCVAAGAKKIVLHPFFLSPGRHVMSDIPALMQGAAVRback to top mRNA from alignment at H-paniculata_contig9084:1738..2040+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9084.16917.1 ID=mRNA_H-paniculata_contig9084.16917.1|Name=mRNA_H-paniculata_contig9084.16917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=303bp|location=Sequence derived from alignment at H-paniculata_contig9084:1738..2040+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9084:1738..2040+ >mRNA_H-paniculata_contig9084.16917.1 ID=mRNA_H-paniculata_contig9084.16917.1|Name=mRNA_H-paniculata_contig9084.16917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=582bp|location=Sequence derived from alignment at H-paniculata_contig9084:1738..2040+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |