mRNA_H-paniculata_contig9081.16916.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Match: A0A6H5L2F5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2F5_9PHAE) HSP 1 Score: 330 bits (845), Expect = 1.070e-105 Identity = 156/190 (82.11%), Postives = 179/190 (94.21%), Query Frame = 2
Query: 401 VWNLPNVITMARVVAIPIFATAFYAAFPQRNVWCSGIFAGAALTDWLDGYIARKQGIVTPFGAFLDPVADKLMVSTALILLSERLGPWMTICSAIILCRELTISALREWMAQLGLRDTVKVGNAGKWKAATQMVAISLLLLLEPGASVTLVPVGTFMPLAKGLLYLSTVLTITSGSGYLRAAWPALMGRA 970
+WN+PN++TMARV+AIP+FAT FYA+ P+RN+WCS IFAGAA TDWLDGYIAR+QGIVTPFG+FLDPVADKL+VSTALILLSERLGPWMT+CSAIILCREL ISALREWMAQLGLR+TVKVGNAGKWK ATQM+AI++LLLLEPGA+VTLV T MP+AK LLY+STVLT+TSGSGYL+AAWPALMG+A
Sbjct: 155 LWNVPNILTMARVMAIPVFATIFYASLPRRNIWCSAIFAGAAFTDWLDGYIARRQGIVTPFGSFLDPVADKLLVSTALILLSERLGPWMTVCSAIILCRELAISALREWMAQLGLRETVKVGNAGKWKTATQMMAITMLLLLEPGAAVTLVNPATAMPIAKSLLYVSTVLTVTSGSGYLKAAWPALMGKA 344
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Match: A0A835ZDG0_9STRA (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDG0_9STRA) HSP 1 Score: 250 bits (638), Expect = 2.830e-76 Identity = 118/196 (60.20%), Postives = 153/196 (78.06%), Query Frame = 2
Query: 380 KGSAPPGVWNLPNVITMARVVAIPIFATAFYAAFPQRNVWCSGIFAGAALTDWLDGYIARKQGIVTPFGAFLDPVADKLMVSTALILLSERLGPWMTICSAIILCRELTISALREWMAQLGLRDTVKVGNAGKWKAATQMVAISLLLLLEPGASVTLVPVGTFMPLAKGLLYLSTVLTITSGSGYLRAAWPALMGR 967
+G P +WN+PN++T+AR++ +PI FYA RN+WC+ +FAGAA+TDWLDG+ ARK I +PFGAFLDPVADKL+V+ A+ILLSERLG WMT+C++IILCRE+ +SALREWMAQ+G R VKVG AGK K A QMVA++ LLLL+P A+ ++P F K L+ S VLT+TSG+GYL+AAWPALMG+
Sbjct: 37 EGVNTPTLWNVPNILTLARLICVPILGFLFYAPIANRNIWCAALFAGAAITDWLDGWWARKFNIASPFGAFLDPVADKLIVAVAMILLSERLGEWMTVCTSIILCREIAVSALREWMAQIGARGVVKVGMAGKCKTAAQMVALTTLLLLQPSAAPAILPPVAF-DAGKWLMIFSAVLTVTSGTGYLQAAWPALMGK 231
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Match: A0A7S2V0D2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D2_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.600e-64 Identity = 117/190 (61.58%), Postives = 141/190 (74.21%), Query Frame = 2
Query: 401 VWNLPNVITMARVVAIPIFATAFYAAFPQRNVWCSGIFAGAALTDWLDGYIARKQGIVTPFGAFLDPVADKLMVSTALILLSERLGPWMT-ICSAIILCRELTISALREWMAQLGLRDTVKVGNAGKWKAATQMVAISLLLLLEPGASVTLVPVGTFMPLAKGLLYLSTVLTITSGSGYLRAAWPALMGR 967
+WN+PN++TM RVVAIPIFA FY P RN + IFA A+ TDWLDGY+ARK I +PFGAFLDPVADKLMV++AL+LL+ G W+ + +AIIL RE+T+SALREWMA G R V+VG AGK K A QMV++ LLLL + GA L PV P A LLYLSTVLT+TSG GYL+AAWPAL G+
Sbjct: 27 LWNIPNILTMLRVVAIPIFAFVFYLPVPWRNKATAAIFAVASATDWLDGYLARKWKITSPFGAFLDPVADKLMVASALVLLAGSEGGWVVAVPAAIILAREITVSALREWMAGRGERSKVQVGMAGKVKTACQMVSLILLLLAQKGADCPL-PVSLLHPAALALLYLSTVLTVTSGWGYLQAAWPALSGK 215
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Match: A0A7S2UZN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN3_9STRA) HSP 1 Score: 219 bits (557), Expect = 5.180e-63 Identity = 117/190 (61.58%), Postives = 141/190 (74.21%), Query Frame = 2
Query: 401 VWNLPNVITMARVVAIPIFATAFYAAFPQRNVWCSGIFAGAALTDWLDGYIARKQGIVTPFGAFLDPVADKLMVSTALILLSERLGPWMT-ICSAIILCRELTISALREWMAQLGLRDTVKVGNAGKWKAATQMVAISLLLLLEPGASVTLVPVGTFMPLAKGLLYLSTVLTITSGSGYLRAAWPALMGR 967
+WN+PN++TM RVVAIPIFA FY P RN + IFA A+ TDWLDGY+ARK I +PFGAFLDPVADKLMV++AL+LL+ G W+ + +AIIL RE+T+SALREWMA G R V+VG AGK K A QMV++ LLLL + GA L PV P A LLYLSTVLT+TSG GYL+AAWPAL G+
Sbjct: 140 LWNIPNILTMLRVVAIPIFAFVFYLPVPWRNKATAAIFAVASATDWLDGYLARKWKITSPFGAFLDPVADKLMVASALVLLAGSEGGWVVAVPAAIILAREITVSALREWMAGRGERSKVQVGMAGKVKTACQMVSLILLLLAQKGADCPL-PVSLLHPAALALLYLSTVLTVTSGWGYLQAAWPALSGK 328
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Match: W7TJV8_9STRA (Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJV8_9STRA) HSP 1 Score: 209 bits (532), Expect = 3.890e-59 Identity = 102/194 (52.58%), Postives = 142/194 (73.20%), Query Frame = 2
Query: 395 PGVWNLPNVITMARVVAIPIFATAFYAAFPQRNVWCSGIFAGAALTDWLDGYIARKQGIVTPFGAFLDPVADKLMVSTALILLSERLG-PWMTICSAIILCRELTISALREWMAQLGLRDTVKVGNAGKWKAATQMVAISLLLLLEPGASVTLVPVGTFMPLAKGLLYLSTVLTITSGSGYLRAAWPALMGRAE 973
P +WNLPN++T+ RV++IP+ +Y + RN CSG+F AA+TDWLDGY+AR+ + +P GAFLDPVADKLMV+TAL+L+++RL P +T+ +AII+CRE+ +SALREWMA G RDTV VG GK+K ATQM+A+S+LL ++P + + + GLL S VLT+ S GY++AAWPAL G+A+
Sbjct: 154 PSLWNLPNILTLLRVISIPVLIIIYYTSASWRNAACSGLFVFAAMTDWLDGYLARRMNLSSPLGAFLDPVADKLMVATALVLMADRLNSPVVTVSTAIIICREIGVSALREWMASQGARDTVAVGWWGKFKTATQMLALSVLLYVQPPLASHDALAHKLLEVGVGLLAFSAVLTVYSAVGYVQAAWPALTGKAK 347
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Match: A0A370DFG8_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=6 Tax=Bacteria TaxID=2 RepID=A0A370DFG8_9GAMM) HSP 1 Score: 184 bits (467), Expect = 1.310e-51 Identity = 97/190 (51.05%), Postives = 132/190 (69.47%), Query Frame = 2
Query: 401 VWNLPNVITMARVVAIPIFATAFYAAFPQRNVWCSGIFAGAALTDWLDGYIARKQGIVTPFGAFLDPVADKLMVSTALILLSE-RLGPWMTICSAIILCRELTISALREWMAQLGLRDTVKVGNAGKWKAATQMVAISLLLLLEPGASVTLVPVGTFMPLAKGLLYLSTVLTITSGSGYLRAAWPALMGR 967
+WN+PN++T+ R+V IP+F FY + C+ +FA AA+TDWLDG++AR+ G V+PFGAFLDPVADKLMV+ AL+LL + PW+ + +AII+ RE+TISALREWMA LG R V V GK+K A QM+AI LL++ + + + VG LLY+S +LT+ S YLRAAWP+LMG+
Sbjct: 1 MWNIPNLLTLLRIVLIPVFVLIFYLPVEWARIGCAAVFALAAVTDWLDGFLARRWGQVSPFGAFLDPVADKLMVAVALLLLVQSEPTPWLALPAAIIIGREITISALREWMAALGARAQVAVSVIGKFKTAAQMLAILLLIIQQDLWGLPIHTVGFV------LLYISAILTLWSMVIYLRAAWPSLMGK 184
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Match: A0A831W802_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A831W802_9GAMM) HSP 1 Score: 183 bits (465), Expect = 2.250e-51 Identity = 95/187 (50.80%), Postives = 130/187 (69.52%), Query Frame = 2
Query: 401 VWNLPNVITMARVVAIPIFATAFYAAFPQRNVWCSGIFAGAALTDWLDGYIARKQGIVTPFGAFLDPVADKLMVSTALILL-SERLGPWMTICSAIILCRELTISALREWMAQLGLRDTVKVGNAGKWKAATQMVAISLLLLLEPGASVTLVPVGTFMPLAKGLLYLSTVLTITSGSGYLRAAWPAL 958
+W++PN++T +R++ IP+F FY P + + +F AA TDWLDG++AR+ G+V+P GAFLDPVADKLMV+TAL+LL ++ PWM I +A+I+ RE+TISALREWMA+LG R TV V GK+K ATQM AI+LL+ P + +G LLY++ VLT+ S YLRAAWP+L
Sbjct: 1 MWSIPNLLTFSRIIMIPVFIGLFYLPAPWNHQVAALVFMIAAFTDWLDGFLARRMGLVSPLGAFLDPVADKLMVATALVLLVADNPSPWMAISAAVIIGREITISALREWMAELGSRTTVAVSLIGKFKTATQMGAITLLIYRHPLFGLPTYRIGEI------LLYIAVVLTLWSMMVYLRAAWPSL 181
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Match: A0A257D3X3_9PSED (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pseudomonas sp. PGPPP3 TaxID=2015555 RepID=A0A257D3X3_9PSED) HSP 1 Score: 183 bits (464), Expect = 2.960e-51 Identity = 97/192 (50.52%), Postives = 128/192 (66.67%), Query Frame = 2
Query: 407 NLPNVITMARVVAIPIFATAFYAAFPQRNVWCSGIFAGAALTDWLDGYIARKQGIVTPFGAFLDPVADKLMVSTALILL-SERLGPWMTICSAIILCRELTISALREWMAQLGLRDTVKVGNAGKWKAATQMVAISLLLLLEPGASVTLVPVGTFMPLAKGLLYLSTVLTITSGSGYLRAAWPALMGRAEKK 979
N+PN++T+ RV+ IP+F FY F ++ S +FA AA TDWLDGY+AR+ TPFGAFLDPVADKL+V+ AL+LL E W+T+ +A+I+ RE+ +SALREWMA+LG R V V N GKWK A QM+A+ +LL P S ++ L GLL++S LT+ S + YLRAAWP L EKK
Sbjct: 4 NIPNLLTVLRVLLIPVFVLLFYLPFSWSHLAASAVFAFAAATDWLDGYLARRLQQSTPFGAFLDPVADKLIVAVALVLLVDEHASLWLTLPAAVIISREIVVSALREWMAELGARAQVAVSNVGKWKTAAQMLALVILLANSPQFSF-------WIGLGYGLLFVSAALTLWSMTQYLRAAWPHLSVTTEKK 188
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Match: A0A7S2EJE7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJE7_TRICV) HSP 1 Score: 183 bits (464), Expect = 9.630e-51 Identity = 107/208 (51.44%), Postives = 133/208 (63.94%), Query Frame = 2
Query: 377 GKGSAPPGV---------WN-LPNVITMARVVAIPIFATAFYAAFPQRNVWCSGIFAGAALTDWLDGYIARKQGIVTPFGAFLDPVADKLMVSTALILLSERLGPWMTICSAIILCRELTISALREWMAQLGLRDTVKVGNAGKWKAATQMVAISLLLLLE-PGAS-VTLVPVGTFMPLAKGLLYLSTVLTITSGSGYLRAAWPALMG 964
G G+ PPG W+ +PNV+T R AIP+ FY +V IFA A+ TDWLDGY+AR+ I + FGAFLDPVADKLMVSTALILL+ R GP + + +++IL RE+ +SALREWMAQ GLRD+VKVG GK K A MVA++LLLL+ PG + LLYLS ++T+TSGS Y RAA P LMG
Sbjct: 17 GPGAPPPGPLRRALPSFPWHRVPNVLTYLRCFAIPLLVGLFYTTSEWGHVQTGSIFAVASFTDWLDGYLARRWDITSAFGAFLDPVADKLMVSTALILLAGRHGPAVAVPASVILAREIAVSALREWMAQRGLRDSVKVGFQGKVKTAATMVALTLLLLVPVPGVEGAKFAALAGLQQPGMALLYLSALVTVTSGSVYFRAAAPVLMG 224
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Match: A0A432FZ17_9GAMM (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A432FZ17_9GAMM) HSP 1 Score: 181 bits (458), Expect = 2.680e-50 Identity = 94/196 (47.96%), Postives = 133/196 (67.86%), Query Frame = 2
Query: 401 VWNLPNVITMARVVAIPIFATAFYAAFPQRNVWCSGIFAGAALTDWLDGYIARKQGIVTPFGAFLDPVADKLMVSTALILL-SERLGPWMTICSAIILCRELTISALREWMAQLGLRDTVKVGNAGKWKAATQMVAISLLLLLEPGASVTLVPVGTFMPLAKGLLYLSTVLTITSGSGYLRAAWPALMGRAEKKSS 985
+WNLPN++T++R++ IP+F FY + + + +F AA TDWLDGY+AR+ G+V+P GAFLDPVADKLMV+TAL+L+ ++ W+ + +A+I+ RE+TISALREWMA+LG R V V GK+K A QM AI+LL+ + + GT+ LLY++ VLT+ S + YL AAWP L GR + SS
Sbjct: 1 MWNLPNLLTLSRILMIPVFVALFYLSVSWNHKAAALVFMAAAFTDWLDGYLARRMGLVSPLGAFLDPVADKLMVATALVLVVADNPQVWLAVSAAVIIGREITISALREWMAELGNRAKVAVSWVGKFKTAAQMTAITLLIYRHDLLGLPVYKAGTW------LLYIAVVLTLWSMTVYLIAAWPLLSGREKTSSS 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9081.16916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9081.16916.1 >prot_H-paniculata_contig9081.16916.1 ID=prot_H-paniculata_contig9081.16916.1|Name=mRNA_H-paniculata_contig9081.16916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp MAPRSSAPEEGRAELDAATSQEFSTDVDGEVVGDSVIGSVPPPPPPPMRTback to top mRNA from alignment at H-paniculata_contig9081:764..9127+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9081.16916.1 ID=mRNA_H-paniculata_contig9081.16916.1|Name=mRNA_H-paniculata_contig9081.16916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8364bp|location=Sequence derived from alignment at H-paniculata_contig9081:764..9127+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9081:764..9127+ >mRNA_H-paniculata_contig9081.16916.1 ID=mRNA_H-paniculata_contig9081.16916.1|Name=mRNA_H-paniculata_contig9081.16916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at H-paniculata_contig9081:764..9127+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |