mRNA_H-paniculata_contig903.16872.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Match: D7G231_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G231_ECTSI) HSP 1 Score: 417 bits (1072), Expect = 2.710e-129 Identity = 276/645 (42.79%), Postives = 348/645 (53.95%), Query Frame = 2
Query: 1151 PRNASQQKLKELETWLDDIGVDRGGSGGSKGKNPPSVTLKRFPGRGLGLECTRELERGSTVASIPWRMCLSSDPSDAPRGTLRAWAHSLLASTPPPKCDLDGRKQIAVEEDVASVALQLFLEYAAGERSAFAAWVSMLPLDNDDELNLPALWPADDRTALRGTIVLRDTEECLARAVVEQKWVASALARELETAQEGGNVTTMAGEAEADCFVRGWCSPGSGKDMRGRPGLAEWLRVRCTVQSRAYRVGGRYALIPLVDFANHDDGVAYAVSPGDGVFTGTDEVVLSVDRAYQIGEQVCTTYGDMDNAKRLFSFGFVTLTRLGNSVPSEATRQCSTTSVKGSTTDERCTIAERSRRNERSTGVSSSCVDQSLSWYDCQCIDDGRFPITTEAYCDVELPVKCDDPLRSLKVHVLEDFWRKARDENAGSLTAVFRLDRSPHRPLIMKHLVDEYARPFMESALPLLRLVTLTPEDMRCHNLADLKWCVGLFHNPSSDVAGIGKVSRSEHENKAIMPA----RLLVRLKCPVSDHNEQQALRFLQVQCSDRLQAIGLNASDVKTLLEVSGDKGQECRGLGLDPNVGYETFVVSRSRYALCATVRVAEAIAWGLLLNACARGADFGTGSAVEFSLFQEQQTFGGWLQQQC 3073
PR+ S+ LKE+E WLD++GVDR G G PP+ L G+G+GL + ELER STVASIP R+C SSD +DAP GTLRAWAH L AS P K ++ E DVA V LQ+FLE AAGERS A W++ML + LNLPALWP D L+GT+VL+D E CLARA E+ VA+A+ + L GG G +C W +M GRP AEWL RCTVQSRAYRV RY LIPLVDFANHDD VA+AV PGDGVFTG+DEVV DR Y+ GE+VCTTYGDMDNAKRLFSFGFVTL + A+ S+R R G P+ TEA+CDVEL + D LR K VL + + D + +L A+F P P + + LV+ AR F+ES LP++RLV LTPE++ + S D +++ + + ++ A ++L L +S NEQQALR L QC RL ++ DV+TL V+ D + +TF R LCATVRV EAIAW LL ACA + GTG +E+QT+ W ++C
Sbjct: 62 PRS-SKSSLKEIELWLDEVGVDRRGGG----CGPPAARLTSVSGKGIGLTASVELERDSTVASIPRRICFSSDAADAPAGTLRAWAHDLFASIPSSAAAACSEKHLSFEGDVAVVTLQVFLESAAGERSTCAPWMAML--NRKGSLNLPALWPDSDLEGLKGTLVLQDVEACLARAKSERVAVAAAMVKGLRGELGGGGRAGGEGGGFPECP---WLDT---SNMEGRPTFAEWLHARCTVQSRAYRVRRRYLLIPLVDFANHDDDVAFAVCPGDGVFTGSDEVVFVADRTYRPGEEVCTTYGDMDNAKRLFSFGFVTLKQHA---------------------------AQPSQR--RPAG--------------------NMLPLPTEAFCDVELTIAATDELRVFKEAVLRE-RQAGEDLVSPNLGAMF-----PLTPFVSQ-LVEGPARLFVESVLPVMRLVALTPEELTGGDAFGDACDTRSVFGTSFD----SRMTDTSSDKCPVLAAGTGRQVLAHLGSRLSLQNEQQALRLLAEQCRTRLGSLNPTFGDVETLRAVADDSHES------------KTFAACGPRSLLCATVRVGEAIAWYALLKACAEKMEGGTG-------VREEQTWASWTLERC 614
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Match: A0A6H5K108_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K108_9PHAE) HSP 1 Score: 412 bits (1058), Expect = 2.990e-127 Identity = 280/649 (43.14%), Postives = 352/649 (54.24%), Query Frame = 2
Query: 1151 PRNASQQKLKELETWLDDIGVDRGGSGGSKGKNPPSVTLKRFPGRGLGLECTRELERGSTVASIPWRMCLSSDPSDAPRGTLRAWAHSLLASTPPPKCDLDGRKQIAVEEDVASVALQLFLEYAAGERSAFAAWVSMLPLDNDDELNLPALWPADDRTALRGTIVLRDTEECLARAVVEQKWVASALARELETAQEGGNVTTMAGEAEA--DCFVRGWCSPGSGKDMRGRPGLAEWLRVRCTVQSRAYRVGGRYALIPLVDFANHDDGVAYAVSPGDGVFTGTDEVVLSVDRAYQIGEQVCTTYGDMDNAKRLFSFGFVTLTRLGNSVPSEATRQCSTTSVKGSTTDERCTIAERSRRNERSTGVSSSCVDQSLSWYDCQCIDDGRFPITTEAYCDVELPVKCDDPLRSLKVHVLEDFWRKARDE-NAGSLTAVFRLDRSPHRPLIMKHLVDEYARPFMESALPLLRLVTLTPEDMR----CHNLADLKWCVG-LFHNPSSDVAGIGKVSRSEHENKAIMPARLLVRLKCPVSDHNEQQALRFLQVQCSDRLQAIGLNASDVKTLLEVSGDKGQECRGLGLDPNVGYETFVVSRSRYALCATVRVAEAIAWGLLLNACARGADFGTGSAVEFSLFQEQQTFGGWLQQQC 3073
PR+ S+ LKE+E WLD+IGVDR G G PP+ L G+G+GL ELER STVASIP ++C SSD +DAP GTLRAWAH L AS P K ++ E DVA V LQ+FLE AAG S A W++ML + LNLPALWP D L+GT+VL+D E CLARA E+ VASA+ L G GEA +C W P +M GRP AEWL RCTVQSRAYRVG RY LIPLVDFANHDD VA+AV PGDGVFTG+DEVV DR Y+ GE+VCTTYGDMDNAKRLFSFGFVTL + A+ +R R TG + TEA+CDVEL + D LR +K V + R+A D+ ++ SL+AVF P P + + LVD AR F+ES LP+LRLV LTP+++ + D + +G +F + +D + + + + + L L +S NEQQALR L QC RL ++ L SDV+ L V+ D + + F R LCATVRV EAIAW LL AC + TG +E+QT+ W+ ++C
Sbjct: 62 PRS-SKSSLKEMELWLDEIGVDRRGGG----CGPPAARLTWVSGKGIGLTAAVELERDSTVASIPRKICFSSDAADAPAGTLRAWAHDLFASIPSSAAAACSEKHLSFERDVAVVTLQVFLERAAGASSTCAPWMAML--NRKGHLNLPALWPDSDLEGLKGTLVLQDVEACLARAKSERVAVASAMVTGLRGDFGAGG--REGGEAGGFPECT---WLDP---SNMEGRPTFAEWLHARCTVQSRAYRVGRRYLLIPLVDFANHDDDVAFAVCPGDGVFTGSDEVVFVADRTYRPGEEVCTTYGDMDNAKRLFSFGFVTLKQHA---------------------------AQPFQR--RLTG--------------------NMLALPTEAFCDVELTIAATDALRVVKETVFRE--RRAGDDLSSPSLSAVF-----PLTPFVSQ-LVDGPARLFVESVLPVLRLVALTPDELTGGEAFGDAFDTRSALGTIFESMVTDTSSDRCPVLAAGKGRQV-----LAHLGSRLSLQNEQQALRLLAEQCRTRLGSLNLTTSDVEALSAVADDSHES------------KAFAACGPRSLLCATVRVGEAIAWYALLKACDEKMEGCTG-------VREEQTWASWMLERC 614
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Match: D7G230_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G230_ECTSI) HSP 1 Score: 174 bits (442), Expect = 8.470e-47 Identity = 92/155 (59.35%), Postives = 115/155 (74.19%), Query Frame = 1
Query: 109 MNKYQVLGASKSASLQELRGKYQAKARETHPDKQGRHTNESQKAEAAKQFLAVQEAWETLRDADLRQEYDSRLSLQEAHVVVSDEVNADEMEYDQTDEGSYSHECRCGEAYVVSSAELREGFDVVGCLGCSLYIRVVG----PSSGITESAPEND 561
M+KY+VLG +SASLQE++G YQA A +HPDKQ KA+A+++FL +Q AWETLRD DLRQEYD RL LQ ++VVSDEVN D+M +D+ D GS+SHECRCGEAYVV+ EL EGF+V+ C GCSLYIRV+G P++ T AP D
Sbjct: 1 MSKYEVLGVKRSASLQEIKGAYQAAALASHPDKQASLATAELKAQASQRFLLIQAAWETLRDEDLRQEYDCRLDLQARNIVVSDEVNVDDMHFDEADGGSFSHECRCGEAYVVTRDELNEGFEVLDCPGCSLYIRVLGKLAEPAAATT--APATD 153
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Match: A0A836CL58_9STRA (Heat shock protein 40 like protein/ DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL58_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.950e-27 Identity = 65/140 (46.43%), Postives = 88/140 (62.86%), Query Frame = 1
Query: 109 MNKYQVLGASKSASLQELRGKYQAKARETHPDKQGRHTN-ESQKAEAAKQFLAVQEAWETLRDADLRQEYDSRLSLQEAHVVVSDEVNADEMEYDQTDEGSYSHECRCGEAYVVSSAELREGFDVVGCLGCSLYIRVVGP 525
MNKY +LG ++ASL++++ YQ A + HPDK +T + F AVQEAWETLRD + R +YD RL H +S++VNA +M+ ++G H CRCGEAY V+ ELREG +VV C GCSL +RV+ P
Sbjct: 1 MNKYDLLGIPRNASLEQVKRAYQQAALKLHPDKASPNTTGTADDFSRLDPFRAVQEAWETLRDPERRADYDERLEAASKHATISEDVNASDMQL--CEDGVLMHPCRCGEAYEVTQDELREGLNVVPCSGCSLNVRVLPP 138
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Match: A0A225W9C9_9STRA (Heat shock protein 40 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W9C9_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.370e-23 Identity = 61/148 (41.22%), Postives = 92/148 (62.16%), Query Frame = 1
Query: 118 YQVLGASKSASLQELRGKYQAKARETHPDKQGRHTNESQKAEAAKQFLAVQEAWETLRDADLRQEYDSRL-------SLQEAHVVVSDEVNADEMEYD-------QTDEGSYSHECRCGEAYVVSSAELREGFDVVGCLGCSLYIRVV 519
Y+VLG + + S ++R Y AR+ HPDK+ S +QFL VQEA+ETLR A+LR++YD+++ ++ VV+SDEV+ DEM+ + DE ++H+CRCG+ Y ++ EL++G DVV C GCSL+IRV+
Sbjct: 6 YEVLGVAATCSTDDVRRAYHQAARKYHPDKRSNGVTNSPILADEQQFLRVQEAYETLRSAELRRQYDAKILHDELVHKREQEVVVISDEVSLDEMQREVLQGEDGDEDEVIFTHQCRCGDMYEITKEELKDGVDVVPCTGCSLHIRVL 153
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Match: A0A3M6VA91_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA91_9STRA) HSP 1 Score: 107 bits (268), Expect = 2.620e-23 Identity = 63/148 (42.57%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 118 YQVLGASKSASLQELRGKYQAKARETHPDKQGRHTNESQKAEAAK---QFLAVQEAWETLRDADLRQEYDSRLSL-------QEAHVVVSDEVNADEMEYD----QTDEGSYSHECRCGEAYVVSSAELREGFDVVGCLGCSLYIRVV 519
Y+VLG + + S ++R Y AR+ HPDK+ + + AK QFL+VQ A+ETLR+A+LRQ+YD +L ++ VVVSDEV+ +M+ + + DE Y+H+CRCG+ Y ++ EL +G DVV C+GCSL+IRV+
Sbjct: 7 YEVLGVAATCSTDDIRHAYHQVARKYHPDKRLKDVSSDADDSVAKNEQQFLSVQAAYETLRNAELRQQYDDKLQQDKLVRKREQEVVVVSDEVSLADMQREVLQAEDDEVIYTHQCRCGDLYEITEDELHDGVDVVSCIGCSLHIRVL 154
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Match: G4YGH6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YGH6_PHYSP) HSP 1 Score: 106 bits (265), Expect = 5.920e-23 Identity = 65/152 (42.76%), Postives = 93/152 (61.18%), Query Frame = 1
Query: 118 YQVLGASKSASLQELRGKYQAKARETHPDKQGRHTNESQKAEAAKQFLAVQEAWETLRDADLRQEYDSRLSL-------QEAHVVVSDEVNADEMEYD-------QTDEGSYSHECRCGEAYVVSSAELREGFDVVGCLGCSLYIRVVGPSS 531
Y+VLG + + S ++R Y AR HPDK+ N AE +QFL VQEA+ETLR A+LR++YD++L +E VVVSDEV +M+ + DE ++H+CRCG+ Y ++ EL++G DVV C GCSL+IRV+ S+
Sbjct: 8 YEVLGLAATCSADDVRRAYHQAARRYHPDKRANDLN----AEDEQQFLRVQEAYETLRSAELRRQYDAKLQQDELVRKREEEVVVVSDEVPLADMQREVLPGEGGDEDEVLFTHQCRCGDLYEITEEELQDGVDVVPCTGCSLHIRVLQNSA 155
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Match: A0A3R7KH33_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KH33_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.310e-22 Identity = 63/150 (42.00%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 118 YQVLGASKSASLQELRGKYQAKARETHPDKQGRHTN--ESQKAEAAKQFLAVQEAWETLRDADLRQEYDSRLSLQEAH-------VVVSDEVNADEMEYD-------QTDEGSYSHECRCGEAYVVSSAELREGFDVVGCLGCSLYIRVV 519
Y+VLG S S ++R Y AR+ HPDK+ ++ E A +QFL VQEA+ETLR+ADLRQ+YD++++ E + +VVSD + ++M+ + + DE ++H+CRCG+ Y +S EL +G DVV C GCSL+IRV+
Sbjct: 73 YEVLGVSVDCSADDIRRAYHQAARKYHPDKRTTASSGHEDSSAHDVQQFLQVQEAYETLRNADLRQQYDAKMTQDELNRKREEEVIVVSDIIALNDMQREVIGSEDGEDDEVLFTHQCRCGDLYEISEGELLDGVDVVPCTGCSLHIRVL 222
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Match: A0A2P4YPH2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YPH2_9STRA) HSP 1 Score: 103 bits (257), Expect = 8.350e-22 Identity = 66/155 (42.58%), Postives = 96/155 (61.94%), Query Frame = 1
Query: 118 YQVLGASKSASLQELRGKYQAKARETHPDKQGR--HTNESQKA--EAAKQFLAVQEAWETLRDADLRQEYDSRLSLQEAH-------VVVSDEVNADEM-------EYDQTDEGSYSHECRCGEAYVVSSAELREGFDVVGCLGCSLYIRVVGPS 528
Y+VLG + + + ++R Y AR+ HPDK+ +TNE+ + E +QFL VQEA+ETLR ++LR++YD++L E VVVSDEV +M E DE ++H+CRCG+ Y ++S EL++G DVV C GCSL+IRV+ S
Sbjct: 6 YEVLGLAAACTADDVRRAYHQAARKYHPDKRSNDLNTNEASGSVLEDEQQFLRVQEAYETLRSSELRRQYDAKLLQDELMRKREQEVVVVSDEVPLSDMLREVLQGEDGDEDEVIFTHQCRCGDLYEITSEELQDGVDVVPCTGCSLHIRVLHDS 160
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Match: A0A8J5MHS3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5MHS3_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.390e-20 Identity = 63/148 (42.57%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 118 YQVLGASKSASLQELRGKYQAKARETHPDKQGRHTN-ESQKAEAAKQFLAVQEAWETLRDADLRQEYDSRLSL--------QEAHVVVSDEVNAD------EMEYDQTDEGSYSHECRCGEAYVVSSAELREGFDVVGCLGCSLYIRV 516
Y VLG + S + +++R Y AR+ HPDK+ N ++ E +QFL VQEA+ETLR+ +LR+EYD++L QE VV D + AD + E DE Y+H+CRCG+ Y ++ EL++G DVV C GCSL+IRV
Sbjct: 7 YDVLGVAASCNAEDVRRAYHQAARKYHPDKRLNDVNADNTYGEDEQQFLRVQEAYETLRNEELRREYDAKLQQDELVRKREQEVMVVSEDVLLADMQREVLQGEDGDEDEVLYTHQCRCGDLYEITEDELQDGVDVVPCTGCSLHIRV 154 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig903.16872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig903.16872.1 >prot_H-paniculata_contig903.16872.1 ID=prot_H-paniculata_contig903.16872.1|Name=mRNA_H-paniculata_contig903.16872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=756bp MLCSWGMGRAPPRLVVALLAITIFDLCRVDGGSRPALSAAGFYAPRHFNIback to top mRNA from alignment at H-paniculata_contig903:17069..25619- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig903.16872.1 ID=mRNA_H-paniculata_contig903.16872.1|Name=mRNA_H-paniculata_contig903.16872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8551bp|location=Sequence derived from alignment at H-paniculata_contig903:17069..25619- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig903:17069..25619- >mRNA_H-paniculata_contig903.16872.1 ID=mRNA_H-paniculata_contig903.16872.1|Name=mRNA_H-paniculata_contig903.16872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4536bp|location=Sequence derived from alignment at H-paniculata_contig903:17069..25619- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |