mRNA_H-paniculata_contig9019.16864.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Match: D8LU88_ECTSI (Ubiquitin domain-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU88_ECTSI) HSP 1 Score: 1014 bits (2621), Expect = 0.000e+0 Identity = 637/1159 (54.96%), Postives = 731/1159 (63.07%), Query Frame = 2
Query: 1460 PRPPAEYAVV------TASTYVIAAVNRFGDAGGMSPLARRLGSGWAPFTEVLETMRLGKSLWAHASSRGIKEINWTLKECVPAALLAAPPESMRAATKAEIAECVSCVRELASTSSVSRGAP---PPVLMQELEQLELGMAMKVFRCPSLERRLAGLMHICGRVTLAEQREQDAANRTGGSLPMLSLGNDKS-AWVTAATMEQWLVDVGFLGELFGSSMHVELAKRSQPILAFLAKRNAVSTSQLDLLWNSTVGKHEAVVRVMCSVVVDLVPFLSPHKRLHLFSCLAQTPFYKYTAQTLDLVYQFTMKALQAQRIVKA-PAGKVGDDSSSAPHTSALSTSHSHPQHGAKLQSDDPATVAGAKGFRRGQVLHCREREWMGYGYGLLWHFVQDAHEQAADGGGSRSPTIIRSPNKPRLGEGASRVEVSSVAHQHRGGGNDTVSPELTSLAARYLVSLLKEPEVAHELWPLITRCMDNIVARRSVPSSLEVLRRAIATLPAHEAKSWFGASRSKENSVPGALETLQRIQRLLPALLEELESYHTAVGSHYGATSTPPANPVTDQSSHLPTDDTLGAVRGGSAAERGRSGADGKSDDRPINKSSAAATSTAAPTAGGVATCGPGGSPRWSAGLSEQAQTRLNHGRVRVNGVMTRYTHLQHVQARLDFLMFALTNSSLCLTEAHVDLIWSILVEEALTPKAADLVLTWLRKACATVGDAAIPAQQVGGGAGSASPIPALRSIEDMSGDSLGSLTGVVGPLPALPEAVLTHLFENKLAAVSFDDHGIRPDVAVLFRLLFIHFNCRSKAIRPDAKASG---------------------GNSAESAFALGVAGGGWVRHGMELEGLDTMWEIVLNATGSRASRTAAALLVELHHRLGPKLKSKAAKIRAGFVDTCLSHLRASVSSMAKLR-----AAPPLVFPVSGGDGLSGDRNPVDESGASNAVKGSDVQGRDGGSTRFGRRRSSSLQSPTDRQHKRGR------SRAASVEGRDLERAGELEVESAG---LGDARGMV---------------VESLRRRVGRCVLVLASFVDRGKEEENNTATGTEAVVRVSVQAGPQSLQVLEVRLPGSTTLGELRYDVARHFRIPAESLELVKEVKRKGNTVTEKLEQDGASLEAIGLI 4753
PR P+ +V TAS + +FG+AGGM+ LA+RL G F EVLET R+GK+L +ASSR +KE NWTLKEC AALL+ PPESMRAATK EIAECVS VR+LA T S A P VL+QELEQLEL MAMKVFRCPSLERRLAGLMHICG VTLAE+ A T GSLP G ++ AW TA ME WLV+VGFL ELFG SMHVELAKRS+PILAFLAKRNAVSTSQLDLLW+STVGKHEAVVRVM VV++LVPFLSPHKRLHLFSC+A+TPF KYT QTL LVY FT+KAL+A R K+ PA K G DS + PH SA ++S Q GA D + RRGQVLHCREREW GYGYGLLW FVQDA +Q NK R G G+ GG TVS L SLAA YLVSLLKEPEV+ ELWPL+TRCM+N+VARRSVP+SLEVLRRAIATLPAHEAKSWFG SRSKENSVPGALETLQR Q LLP LLEEL+ YH +V S+YG +GA RP + G + RW GLSEQ Q LNHGRVRV GV TRY+HLQH+QA+L FLMFALTNSSL L EAHVDL+W +LVE ALTP+AADL L WLR+ CATVGDA+ PAQ GG G+VGPLPALPEA LT+LFE KLA SF G RP+VA LF LLF+H NCR+KAIR D KA+ G S A V GGGWVRHG++L+GLDT+WE+VL+A GS+AS A+ L+VELH RLGPKLKSKAA+I AGFVDTCL +L+ SVS + LR AA P D GS + GS F RRRSSSL P ++GR SR+ SVEGRD+ RA +LE E G +G RG + SL RR GRC+L+LA FV + KEEEN A+GT V RVSV+ GP + VL+VRLP ST LG+LR +VAR FR+PAE LEL + V+RKGN TE L+QDGASLEA+GL+
Sbjct: 264 PRSPSSLFLVEFESGRTASLDLSRLNIKFGEAGGMATLAQRLTGGRPSFGEVLETFRVGKALRTYASSRAVKETNWTLKECAAAALLSVPPESMRAATKVEIAECVSSVRDLALTLSGGGSATANSPLVLLQELEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAERGP--GAVTTNGSLP--PAGESRTVAWATARAMEDWLVEVGFLEELFGCSMHVELAKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLVYLFTVKALEAHRTTKSSPASKPGGDSPAGPHASAAASS----QTGATPAGDGKGGL-----LRRGQVLHCREREWEGYGYGLLWLFVQDAPDQGTG-------------NK-RHGGGS-------------GGEKGTVSAALVSLAAGYLVSLLKEPEVSQELWPLMTRCMENVVARRSVPASLEVLRRAIATLPAHEAKSWFGGSRSKENSVPGALETLQRTQGLLPTLLEELKDYHASVASYYGT--------------------VVGA--------------------RPSQQ-------------GXXXXXXXATAVRWGVGLSEQVQAVLNHGRVRVEGVTTRYSHLQHIQAKLGFLMFALTNSSLSLAEAHVDLLWRVLVEGALTPEAADLALVWLRQVCATVGDASTPAQ---GG----------XXXXXXXXXXXXXTAGLVGPLPALPEAALTYLFETKLAVASFHGSGYRPEVAALFGLLFVHVNCRTKAIRRDVKAAAXXXXXXXXXXXXXXXXXXXXXGGVLGSQGAAVVGGGGWVRHGIDLDGLDTLWEVVLDAAGSQASLAASDLIVELHLRLGPKLKSKAARIGAGFVDTCLHYLQVSVSRIRSLRGRAGDAAAPXXXXXXXXXXXDTAVAVADSGRLREGASGSRI-----GSRHF-RRRSSSLP-PEKGSTRQGRMMGGASSRSTSVEGRDVTRAMQLEAEHHGSVVVGSGRGXXXXXXXXXXXXSPQAQIASLHRRAGRCILLLAKFVTKSKEEENGAASGTTRV-RVSVEVGPDRVPVLDVRLPLSTVLGDLRCEVARRFRVPAEFLELGRVVRRKGNATTEVLDQDGASLEALGLV 1308
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Match: A0A6H5L1L9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L9_9PHAE) HSP 1 Score: 536 bits (1380), Expect = 5.580e-168 Identity = 384/865 (44.39%), Postives = 444/865 (51.33%), Query Frame = 2
Query: 527 PLVRVYDGHIKHFWPDDEVALRVGLSGVGWQIEVHDELGEFTSYLLPESISAAGDAEPGPQ-----SGANKWHKAILLSRRS---QGADGQQRHNLDS-GDSPTDRGTVSIDGTAKGKDPAGGANA-----EAQKDSRADADSSIFEVKFDSGRTATLDLCHFSIRWISFLGHGLGNATAAHDGSRLDTNISANGNAGGRSAGGGRLSSSRPPGFVSIEDLSGPLANSQADVGTRVDVWWPRYNSYFRATIECYNPGQKLHTLLYDDGDVSEINMSKRGFHVVGRVRRPSPANVATATATAGAEVMRTKTEPVLCSE------------------RRRPPTLGPRPPAEYAVVTASTYVIAAVNRFGDAGGMSPLARRLGSGWAPFTEVLETMRLGKSLWAHASSRGIKEINWTLKECVPAALLAAPPESMRAATKAEIAECVSCVRELASTSSVSRGAP---PPVLMQELEQL---------------ELGMAMKVFRCPSLERRLAGLMHICGRVTLAEQREQDAANRTGGSLPMLSLGNDKSA-WVTAATMEQWLVDVGFLGELFGSSMHVELAKRSQPILAFLAKRNAVSTSQLDLLWNSTVGKHEAVVRVMCSVVVDLVPFLSPHKRLHLFSCLAQTPFYKYTAQTLDLVYQFTMKALQAQRIVKAPAGKVGDDSSSAPHTSALSTSHSHPQHGAKLQSDDPATVAGAKGFRRGQVLHCREREWMGYGYGLLWHFVQDAHEQAADGGGSRSPTIIRSPNKPRLGEGASRVEVSSVAHQHRGGGNDTVSPELTSLAARYLVSLLKEPEVAHELWPLITRCMDNIVARRSVPSSLEVLRRAIATLPAHEAKSWFGASRSKEN 2968
PL++ Y H P A RVG +GW I+V D GE Y SA +P + + AN WH+ ++ R S G D D GD G + T G E + R + SS+F V+F+SGRTATLDL I+W+ F G +++ GSR G + S PPGF +D G L+ DVGTRVDVWWPRYNSYFRATIE Y+P HTL Y+DG++ + +MSKRGF V R +P RRRP L PRPPA+YA AS YV+AAVNRFG+AGGM+ LA+RL G F EVLET R+GK+L AHASSR +KE NWTLKEC AALL+ PPESMRAATK EIAE VS VR+LA T S A P VL+QELE E+G A +VFRCPSLERRLAGLMHICG VTLAE+ A T GSLP G ++A W T ME WLV+VGFL ELFGSSMHVELA VVRVM VV++LVPFLSPHKRLHLFSC+A+TPF KYT QTL L V G+ R VLHCREREW GYGYGLLW FVQDA +Q NK R G G+ GG VS L SLAA YLVSLLKEPEV+ ELWPL+TRCM+N+VARRSVP+SLEVLRRAIATLPAHEAKSWFG SRSKEN
Sbjct: 16 PLLKRYFLH-----PSPPPAGRVGPDAIGWCIDVLDVPGELAQY----QFSAPPLDDPAVEWTALTADANMWHRVTVVGRPSGVGDGGDSSSSTGADVVGDEERREGKYREEATRPGSSXXXXXXXXXXXXETSQQPR--SPSSLFLVEFESGRTATLDLSRLDIKWVQFCG---ADSSGVRQGSR-----------GAQEQXXXXXXSRAPPGFGEWDDGDG-LSYDDNDVGTRVDVWWPRYNSYFRATIERYDPNVGTHTLFYEDGEIRDSDMSKRGFRVCYRPPGWTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWGRRRPSPLAPRPPADYAP-DASMYVLAAVNRFGEAGGMATLAQRLSGGRPSFGEVLETFRIGKALRAHASSRAVKETNWTLKECAAAALLSVPPESMRAATKIEIAESVSSVRDLALTLSGGGSATAHAPLVLLQELEXXXXXXXXXXXXXXXGGEVG-ANEVFRCPSLERRLAGLMHICGLVTLAERGP--GAVTTNGSLP--PAGESRTAAWATPRVMEDWLVEVGFLEELFGSSMHVELA----------------------------------VVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHL-------------------------------------------------------VGGSVYTARKAVLHCREREWEGYGYGLLWLFVQDAPDQGTG-------------NK-RHGGGS-------------GGEKGAVSAALVSLAAGYLVSLLKEPEVSQELWPLMTRCMENVVARRSVPASLEVLRRAIATLPAHEAKSWFGGSRSKEN 732
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Match: A0A6H5KTV6_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV6_9PHAE) HSP 1 Score: 233 bits (593), Expect = 1.350e-57 Identity = 148/304 (48.68%), Postives = 181/304 (59.54%), Query Frame = 2
Query: 3896 VAGGGWVRHGMELEGLDTMWEIVLNATGSRASRTAAALLVELHHRLGPKLKSKAAKIRAGFVDTCLSHLRASVSSMAKLRAAPPLVFPVSGGDGLSGDRNPVDESGASNAVKGSDVQGRDGGSTRFGRRRSSSLQSPTDRQHKRGRSRAASVEGRDLERAGELEVESAG---LGDARGMV---------------VESLRRRVGRCVLVLASFVDRGKEEENNTATGTEAVVRVSVQAGPQSLQVLEVRLPGSTTLGELRYDVARHFRIPAESLELVKEVKRKGNTVTEKLEQDGASLEAIGLI 4753
V+GGGWVRHGM+L+GLDT+WE+VL+A GS+AS A+ L+VELH RLGPKLKSKAA+I AGFVDTCL +L+ SVS M LR D S + G GR G SR+ SVEGRD+ RA +LE E G +G RG + SL RR GRC+L+LA FV R KEEEN A+GT VRVSV+ GP + VL+VRLP +T LG+LR +VAR FR+ AE LEL + V+RKGNT TE L+QDGASLEA+GL+
Sbjct: 45 VSGGGWVRHGMDLDGLDTLWEVVLDAAGSQASLAASDLIVELHLRLGPKLKSKAARIGAGFVDTCLHYLQVSVSRMRSLRGRSA--------DAXXXXXXXXXXSSEEDTAVGVADSGRMMGGAS---------------------SRSTSVEGRDVTRAKQLEAEHQGGVVVGSGRGXXXXXXXXXXXXSPQAQIRSLYRRAGRCILLLAKFVTRSKEEENGDASGT-TTVRVSVEVGPDRVPVLDVRLPLNTVLGDLRCEVARRFRVQAEFLELARVVRRKGNTTTEVLDQDGASLEALGLV 318
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Match: A0A4D9CWC4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWC4_9STRA) HSP 1 Score: 174 bits (440), Expect = 8.930e-40 Identity = 183/686 (26.68%), Postives = 274/686 (39.94%), Query Frame = 2
Query: 1157 LANSQADVGTRVDVWWPRYNSYFRATIECYNPGQKLHTLLYDDGDVSEINMSKRGFHVVGRVRRPSPAN--VATATATAGAEVMRTK-TEPVLCSERRRP--PTLGP------------------------RPPAEYAVVTASTYVIAAVNRFGDAGGMSPLARRLGSGWAPFTE--------VLETMRLGKSLWAHASSRGIKEINWTLKECVPAALLAAPPESMRAATKAEIAECVSCVRELASTSSVSRGAPPPVLMQELEQLELGMAMKVFRCPSLERRLAGLMHICGRVTLAEQREQDAANRTGGSLPMLSLGNDKSAWVTAATMEQWLVDVGFLGELFGSSMHVELAKRSQPILAFLAKRNAVSTSQLDLLWNSTVGKHEAVVRVMCSVVVDLVPFLSPHKRLHLFSCLAQTPFYKYTAQTLDLVYQFTMKALQAQRIVKAPAGKVGDDSSSAPHTSALSTSHSHPQHGAKLQSDDPATVAGAKGFRRG---------------------------------------------------------QVLHCREREWMGYGYGLLWHFVQDAHEQAADGGGSRSPTIIRSPNKPRLGEGASRVEVSSVAHQHRGGGNDTVSPELTSLAARYLVSLLKEPEVAHELWP----LITRCMDNIVARRSVPSSLEVLRRAIATLP 2920
L + DVGTRV VWW + Y+ TI Y+ H + YDDGDV + M + F ++ + S A+ V + +++G E + E ERR P PT P RPPA + V S ++A +N F + GG+ L R +P + + L L ++ + + +KE VP +LA E R TK ++ + +L + VSR + ++ + +A + R P LE+RL GL +I ++A ++T +LP L + + + L ++G++ H+E+ RS +L FLA +A+ + LDLLWN+++GKHEAVVR ++++DL+P LSP R HLFS +A F YTA+TL+L+Y T A A R+ G G D L AT+ G G RG V+H R EW YG+GLLW FV D E +R + P SVA LT +A +VSL++E E E W L+ +C++N+ RSV +SL +L R AT P
Sbjct: 302 LGGNARDVGTRVKVWWGKDQVYYTGTISSYDECTGQHVVAYDDGDVRKYLMRHKEFEILNGPEKTSVASLPVPSRRSSSGEEDSPSPLAETASPGERRGPSLPTSPPXXXXXXXXXXXXXXWPHSLWLAARRPPASHQGV--SCLLVAHINLFVNLGGLRVLGRHFYGRGSPLRSSRPPSLAGIRFYLALLHRLRGRLETQPLSVTVFQMKETVPGRVLALEEEDRRGLTKQDLKTLPQQLHDLLTLLGVSRAS----VISATDSFRFSLACLLLRTPQLEKRLYGLAYI-----------REALSKTA-ALPSLPSSLASPPSLPPSLLLHLLRKTEVFPTVYGATTHLEILSRSPFLLHFLAAHHALHSHHLDLLWNTSLGKHEAVVRAFHALLLDLLPSLSPALRRHLFSRIASLSFRDYTAETLELLYLTTKAAWCATRL-----GLPGSDGEGREPVPGLL-----------------ATLGGKGGRHRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREKGEAPMVVHTRSGEW--YGFGLLWRFVMDEGE-------------VRERHVP------------SVA--------------LTKVAIELMVSLMREEE---EAWGAREGLLLKCVENVRGHRSVLASLTLLARTAATYP 903
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Match: A0A7S3I8R3_9CILI (Hypothetical protein (Fragment) n=1 Tax=Fabrea salina TaxID=342563 RepID=A0A7S3I8R3_9CILI) HSP 1 Score: 87.0 bits (214), Expect = 7.580e-14 Identity = 49/186 (26.34%), Postives = 87/186 (46.77%), Query Frame = 2
Query: 1832 LEQLELGMAMKVFRCPSLERRLAGLMHICGRVTLAEQREQDAANRTGGSLPMLSLGNDKSAWVTAATMEQWLVDVGFLGELFGSSMHVELAKRSQPILAFLAKRNAVSTSQLDLLWNSTVGKHEAVVRVMCSVVVDLVPFLSPHKRLHLFSCLAQTPFYKYTAQTLDLVYQFTMKALQAQRIVKAP 2389
LE EL ++MK P LE+R+ G+ I ++T A+ ++++ G + W+ +A + +W+ +FG H ++ RS ++ FL + + +D++WNS GKHEA + +++ ++V SP + FS L F + +Q L LV Q + KAP
Sbjct: 59 LESFELELSMKCLNSPYLEKRIYGISEIIEKITYAKNKDEEDQKVARGIYTYQYSIFKTAKWLNSAALLEWIDRQNLFEIIFGPRSHPQIVMRSAELIKFLYTNSRFTRDNIDVIWNSAAGKHEAEREALINLIQEVVSCFSPQDLQYFFSKLTSLSFPEIDSQILSLVKSLVK---QMSNLCKAP 241
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Match: A0A7S2SST1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SST1_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.920e-11 Identity = 46/130 (35.38%), Postives = 65/130 (50.00%), Query Frame = 2
Query: 1820 LMQELEQLELGMAMKVFRCPSLERRLAGLMHICGRVTLAEQREQ--DAANRTGGSLPMLSLGNDKSAWVTAATMEQWLVDVGFLGELFGSSMHVELAKRSQPILAFLAKRNAVSTSQLDLLWNSTVGKHE 2203
+ + ++ LEL + K+F LERRL GL + L E+ EQ A R G +G AA + WL + F+ E+ G MH+E+ KRS ++ FLA+ V T LDLLW +T HE
Sbjct: 2 IQEVIDPLELEFSFKMFCASQLERRLQGLAY------LREKAEQIVRADGRHGHMTSPRKIG--------AAYVAAWLAEKHFIDEVLGPHMHIEIIKRSDKLIRFLAEMGQVETRHLDLLWTTTTTSHE 117
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Match: A0A1R2CRI8_9CILI (USP domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CRI8_9CILI) HSP 1 Score: 76.3 bits (186), Expect = 6.550e-10 Identity = 45/180 (25.00%), Postives = 88/180 (48.89%), Query Frame = 2
Query: 1835 EQLELGMAMKVFRCPSLERRLAGLMHICGRVTLAEQREQDAANRTGGSLPMLSLGNDKSAWVTAATMEQWLVDVGFLGELFGSSMHVELAKRSQPILAFLAKRNAVSTSQLDLLWNSTVGKHEAVVRVMCSVVVDLVPFLSPHKRLHLFSCLAQTPFYKYTAQTLDLVYQFTMKALQAQR 2374
+ +ELG+A+K+ +CP +E++L GL I + ++E A K + + +W+V+ L E + H E+ KR +L FLA+ + T LDL+ H++++ + V+ D+ P +S + +L+ L TP Y + L ++Y+F+ +++ +R
Sbjct: 326 DSVELGLALKLLKCPYMEKKLKGLSEIKEIIENISEKESSAKR--------------KYKLLNPEVLAKWIVENKVL-ETVVENAHEEMIKRLSCVLIFLAENKKLKTFHLDLILKYAQNHHDSLLISVYKVITDIAPHISFKLQNYLYKKLTDTPAEDYDEKFLRMIYEFSTRSITRER 490
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Match: A0A1R2BCS9_9CILI (USP domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BCS9_9CILI) HSP 1 Score: 74.7 bits (182), Expect = 1.920e-9 Identity = 42/180 (23.33%), Postives = 90/180 (50.00%), Query Frame = 2
Query: 1835 EQLELGMAMKVFRCPSLERRLAGLMHICGRVTLAEQREQDAANRTGGSLPMLSLGNDKSAWVTAATMEQWLVDVGFLGELFGSSMHVELAKRSQPILAFLAKRNAVSTSQLDLLWNSTVGKHEAVVRVMCSVVVDLVPFLSPHKRLHLFSCLAQTPFYKYTAQTLDLVYQFTMKALQAQR 2374
+ ++LG+A+K+ +CP +E++L GL I + ++E K ++ + + +W+++ L E + H E+ KR + FLA+ + TS LDL+ H++++ + V+ D+ P +S + +L+ L +TP Y + L ++ +F++K++ +R
Sbjct: 326 DSVDLGLALKLLKCPYMEKKLKGLSEIKDFIENISEKESSVKR--------------KYKFLNSEVLARWIIENKVL-ETVVENAHEEMIKRLSCVFIFLAENQKLETSHLDLILKYAQNHHDSLLISVYKVITDISPHISFKLQHYLYKKLIETPAEDYDEKFLRMISEFSIKSISQER 490
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Match: A0A7S2SSX8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSX8_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.080e-9 Identity = 49/135 (36.30%), Postives = 65/135 (48.15%), Query Frame = 2
Query: 3392 QHVQARLDFLMFALTNSSLCLTEAHVDLIWSILVEEALTPKAADLVLTWLRKACATVGDAAIPAQQVGGGAGSASPIPALRSIEDMSGDSLGSLTGVVGPLPALPEAVLTHLFENKLAAVSFDDHGIRPDVAVLF 3796
+ VQARL FL F L++SSL L E V+++W LV+ A+TP D L W +ACA G P S PA GD +GS++ L + VL HLF KL + H +RP A L+
Sbjct: 193 RQVQARLGFLTFLLSHSSLALGERQVEVLWDGLVDRAVTPACEDAALDWFTQACADFGAGVRP-----------STSPAATGEPTDEGDGVGSMS-------VLGDGVLQHLFHKKLRKLMM--HRLRPAAAHLY 307
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Match: A0A7S2STX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STX3_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.070e-8 Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 2
Query: 1157 LANSQADVGTRVDVWWPRYNSYFRATIECYNPGQKLHTLLYDDGDVSEINMSKRGF 1324
+ NS DVG R+ VWWP+Y +Y+R TI ++PG HT+ YDD DV ++ + F
Sbjct: 73 VRNSPEDVGARIQVWWPKYETYYRGTITHFDPGLGKHTVTYDDNDVRVYDLKTKQF 128 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9019.16864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9019.16864.1 >prot_H-paniculata_contig9019.16864.1 ID=prot_H-paniculata_contig9019.16864.1|Name=mRNA_H-paniculata_contig9019.16864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1646bp MRPPPEDEMEVMEESMEKCRQCLIAGPAKEWAHRRLQLTQTLPRVLQGLPback to top mRNA from alignment at H-paniculata_contig9019:94..7031- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9019.16864.1 ID=mRNA_H-paniculata_contig9019.16864.1|Name=mRNA_H-paniculata_contig9019.16864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6938bp|location=Sequence derived from alignment at H-paniculata_contig9019:94..7031- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9019:94..7031- >mRNA_H-paniculata_contig9019.16864.1 ID=mRNA_H-paniculata_contig9019.16864.1|Name=mRNA_H-paniculata_contig9019.16864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=9876bp|location=Sequence derived from alignment at H-paniculata_contig9019:94..7031- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |