mRNA_H-paniculata_contig9018.16863.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Match: A0A6H5KAF7_9PHAE (FAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF7_9PHAE) HSP 1 Score: 226 bits (577), Expect = 2.750e-66 Identity = 113/127 (88.98%), Postives = 116/127 (91.34%), Query Frame = 1
Query: 1 VYVQLLRCIQPEVKELVHAALDILVPALPFRLTPPEFMKAIKWTLKIMYEEGHALPQLIHMWHIIVRQPALFYSCGNHFVVQMVNSLSRLGLPPSCPRENRQLAVSLADLMIKWEVHRRERTRTRCA 381
VYVQLLRCIQPEVKELVHAALDILVPALPFRLT EFMKAIKWT KIMYEEGHALPQLIHMWH+IVR PALFYSC +HFV QMVNSLSRLGLPP+CPRENRQLAVSLADLMIKWE H RE TR R A
Sbjct: 1345 VYVQLLRCIQPEVKELVHAALDILVPALPFRLTTGEFMKAIKWTKKIMYEEGHALPQLIHMWHMIVRHPALFYSCRSHFVGQMVNSLSRLGLPPNCPRENRQLAVSLADLMIKWEAHGRELTRLRRA 1471
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI) HSP 1 Score: 226 bits (577), Expect = 2.760e-66 Identity = 113/127 (88.98%), Postives = 116/127 (91.34%), Query Frame = 1
Query: 1 VYVQLLRCIQPEVKELVHAALDILVPALPFRLTPPEFMKAIKWTLKIMYEEGHALPQLIHMWHIIVRQPALFYSCGNHFVVQMVNSLSRLGLPPSCPRENRQLAVSLADLMIKWEVHRRERTRTRCA 381
VYVQLLRCIQPEVKELVHAALDILVPALPFRLT EFMKAIKWT KIMYEEGHALPQLIHMWH+IVR PALFYSC +HFV QMVNSLSRLGLPP+CPRENRQLAVSLADLMIKWE H RE TR R A
Sbjct: 2376 VYVQLLRCIQPEVKELVHAALDILVPALPFRLTTGEFMKAIKWTKKIMYEEGHALPQLIHMWHMIVRHPALFYSCRSHFVGQMVNSLSRLGLPPNCPRENRQLAVSLADLMIKWEAHGRELTRLRRA 2502
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Match: A0A7S2HDV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HDV8_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.400e-54 Identity = 85/123 (69.11%), Postives = 101/123 (82.11%), Query Frame = 1
Query: 7 VQLLRCIQPEVKELVHAALDILVPALPFRLTPPEFMKAIKWTLKIMYEEGHALPQLIHMWHIIVRQPALFYSCGNHFVVQMVNSLSRLGLPPSCPRENRQLAVSLADLMIKWEVHRRERTRTR 375
V LLR QPE +ELV ALDILVPALP RL P +F+KAIKWT KIMYEEGHALPQLIHMWH++VR PALFY+ F+ QMV SL+RLGLPP+CP +NR LAVSLA+L+I+W++HR ER + R
Sbjct: 1 VALLRAYQPECRELVKTALDILVPALPSRLPPNDFIKAIKWTKKIMYEEGHALPQLIHMWHLLVRHPALFYAYRAQFIPQMVQSLNRLGLPPNCPLDNRTLAVSLAELIIEWQIHREERLKLR 123
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Match: F0YHH3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHH3_AURAN) HSP 1 Score: 167 bits (422), Expect = 2.090e-45 Identity = 82/127 (64.57%), Postives = 99/127 (77.95%), Query Frame = 1
Query: 1 VYVQLLRCIQPEVKELVHAALDILVPALPFRLTPPEFMKAIKWTLKIMYEEGHALPQLIHMWHIIVRQPALFYSCGNHFVVQMVNSLSRLGLPPSCPRENRQLAVSLADLMIKWEVHRRERTRTRCA 381
VYV LLR QPE +ELV ALDIL+PALP RL +F+KAIKWT KIMYEEGHAL QL+HMW ++VR P LFY + F+ QMVNSL+RLGLPP+CP ENRQLAV+LADL++ WE R + ++ R A
Sbjct: 2871 VYVALLRTFQPEARELVKVALDILIPALPKRLPMADFIKAIKWTKKIMYEEGHALAQLVHMWQLVVRHPTLFYPYRSQFMPQMVNSLNRLGLPPNCPVENRQLAVALADLILNWESQRLDDSKPRNA 2997
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Match: A0A8J2WWQ5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWQ5_9STRA) HSP 1 Score: 162 bits (410), Expect = 8.610e-44 Identity = 77/115 (66.96%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 1 VYVQLLRCIQPEVKELVHAALDILVPALPFRLTPPEFMKAIKWTLKIMYEEGHALPQLIHMWHIIVRQPALFYSCGNHFVVQMVNSLSRLGLPPSCPRENRQLAVSLADLMIKWE 345
VYV LLR QPE +ELV ALDIL+PALP RL +F+KA+KWT KIMYEEGHAL QL+HMW ++VR P LF+ + F+ QMVNSL+RLGLPP+CP ENRQLAV+LADL++ WE
Sbjct: 2152 VYVALLRTFQPEARELVKVALDILIPALPKRLPINDFVKAVKWTKKIMYEEGHALAQLVHMWQLVVRHPGLFFPYRSQFMPQMVNSLNRLGLPPNCPVENRQLAVALADLIMNWE 2266
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Match: A0A7R9U8N6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8N6_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.220e-41 Identity = 76/121 (62.81%), Postives = 91/121 (75.21%), Query Frame = 1
Query: 1 VYVQLLRCIQPEVKELVHAALDILVPALPFRLTPPEFMKAIKWTLKIMYEEGHALPQLIHMWHIIVRQPALFYSCGNHFVVQMVNSLSRLGLPPSCPRENRQLAVSLADLMIKWEVHRRER 363
VYV LLR QP+ + LV AALDILVPAL RL +F K+++WT KIMYE+GH LPQL+HMWH+I R P LFYS FV QMVNSL+R+GLPPS ENR LA+ L DL++ WE HRR+R
Sbjct: 2150 VYVALLRTFQPDDRGLVRAALDILVPALQDRLDADDFYKSLRWTRKIMYEDGHTLPQLVHMWHLITRHPTLFYSYRVQFVPQMVNSLNRVGLPPSTHIENRHLAIGLVDLILSWEQHRRDR 2270
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Match: A0A7S1U5K1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5K1_9STRA) HSP 1 Score: 141 bits (355), Expect = 8.380e-41 Identity = 64/90 (71.11%), Postives = 76/90 (84.44%), Query Frame = 1
Query: 106 EFMKAIKWTLKIMYEEGHALPQLIHMWHIIVRQPALFYSCGNHFVVQMVNSLSRLGLPPSCPRENRQLAVSLADLMIKWEVHRRERTRTR 375
EF+K+IKWT KIMYEEGHALPQLIHMW +I R P+LFYS + FV QMVNSL+RLGLPP+CP ENRQLA+SL DL++ WE HRRER + +
Sbjct: 2 EFIKSIKWTKKIMYEEGHALPQLIHMWQLITRHPSLFYSYRSQFVPQMVNSLNRLGLPPNCPIENRQLAISLVDLILSWEHHRRERLKAK 91
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Match: A0A835YLT9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLT9_9STRA) HSP 1 Score: 140 bits (354), Expect = 5.800e-40 Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 1
Query: 1 VYVQLLRCIQPEVKELVHAALDILVPALPFRLTPPEFMKAIKWTLKIMYEEGHALPQLIHMWHIIVRQPALFYSCGNHFVVQMVNSLSRLGLPPSCPRENRQLAVSLADLMIKWE 345
VYV LLR QPEVKELV ALDILVPALP RL P + +K IKWT KIMYEE H + LIH+WH++VR PA+FY F+ Q+V L RLGL +CP E R L+V+L+D+++ WE
Sbjct: 73 VYVALLRTHQPEVKELVRVALDILVPALPRRLGPQDMLKCIKWTRKIMYEESHMMTHLIHIWHMVVRHPAIFYPYRGQFLQQVVTHLPRLGLQHNCPFEQRALSVALSDVVLAWE 187
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Match: A0A7S0EQU9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EQU9_9EUKA) HSP 1 Score: 135 bits (340), Expect = 7.630e-38 Identity = 70/120 (58.33%), Postives = 86/120 (71.67%), Query Frame = 1
Query: 1 VYVQLLRCIQPEVKELVHAALDILVPALPFRLTPPE--FMKAIKWTLKIMYEEGHALPQLIHMWHIIVRQPALFYSCGNHFVVQMVNSLSRLGLPPSCPRENRQLAVSLADLMIKWEVHR 354
VYV LLR QP+ + LV ALDIL PALP RL + + IKWT KI+ EEGH+LPQLIH+W ++VR P LF+S FV QMVNSL+R+GL P+C ENR+LAV LA L+I WE+ R
Sbjct: 62 VYVALLRTFQPDARTLVKQALDILTPALPKRLPAGDHKYPTWIKWTKKIIVEEGHSLPQLIHIWQLVVRHPNLFFSSCAQFVPQMVNSLNRIGLSPNCSIENRKLAVELAQLIISWELQR 181
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Match: A0A1V9ZBZ5_9STRA (Phosphatidylinositol kinase (PIK-L3) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBZ5_9STRA) HSP 1 Score: 145 bits (365), Expect = 9.980e-38 Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 1
Query: 1 VYVQLLRCIQPEVKELVHAALDILVPALPFRLTPPEFMKAIKWTLKIMYEEGHALPQLIHMWHIIVRQPALFYSCGNHFVVQMVNSLSRLGLPPSCPRENRQLAVSLADLMIKWEVHRRER 363
VYV LLR + + + LV A DIL+PALP RL P EF+KAIKWT KI +EEGH L QL+H+W++IVRQP+LFY F+ MVNSL+RL +PPS ++NR+LAVS+ DL+I WE RR+R
Sbjct: 2282 VYVALLRTYEMDSRFLVRKAFDILLPALPTRLPPHEFIKAIKWTKKIAFEEGHILQQLVHIWYLIVRQPSLFYPFRGQFIPLMVNSLNRLAIPPSSTQDNRRLAVSVVDLVIAWETTRRQR 2402 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9018.16863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9018.16863.1 >prot_H-paniculata_contig9018.16863.1 ID=prot_H-paniculata_contig9018.16863.1|Name=mRNA_H-paniculata_contig9018.16863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp VYVQLLRCIQPEVKELVHAALDILVPALPFRLTPPEFMKAIKWTLKIMYEback to top mRNA from alignment at H-paniculata_contig9018:7579..8984- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9018.16863.1 ID=mRNA_H-paniculata_contig9018.16863.1|Name=mRNA_H-paniculata_contig9018.16863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1406bp|location=Sequence derived from alignment at H-paniculata_contig9018:7579..8984- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9018:7579..8984- >mRNA_H-paniculata_contig9018.16863.1 ID=mRNA_H-paniculata_contig9018.16863.1|Name=mRNA_H-paniculata_contig9018.16863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at H-paniculata_contig9018:7579..8984- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |