mRNA_H-paniculata_contig900.16856.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig900.16856.1
Unique NamemRNA_H-paniculata_contig900.16856.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Match: D8LF00_ECTSI (Isochorismatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF00_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 2.120e-119
Identity = 181/274 (66.06%), Postives = 222/274 (81.02%), Query Frame = 1
Query:  298 GGTALLIVDPQMDFHEGGSLDVPGATADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDK--SGSHPTPFTKITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTTGHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGDDSNERGKALLDQMCQLDSILLCGQASSHCVNYSARDLAAAWKHSAASS-DENGVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTVRTCRD 1110
            GGTALLIVDPQ DFHEGG+L + GA+ DAERIAQLV D SE IDEI VTLDSHH +DIAHP FWTD    GS+P PFT I ++D+  G W PV++EH++HCIEYT+KLE G KFTLCVWPEHCLIGT GHAV+P IN+AIQ+WAVA+K++VTYV KGQ+ L+E YSCF AEV V GD++NE+G+ LL ++C  D +++CGQASSHCVN+SARDLAAAWK + A   +E+  R+RM SLVLL+DG SPV GFE EA+ F  DM GMG++VR+C +
Sbjct:   23 GGTALLIVDPQADFHEGGALAIQGASDDAERIAQLVTDQSEHIDEIVVTLDSHHRMDIAHPMFWTDGRGGGSYPAPFTLIKSEDIQNGTWLPVEEEHKEHCIEYTRKLEEGGKFTLCVWPEHCLIGTPGHAVNPVINKAIQEWAVAKKRSVTYVHKGQHPLTEHYSCFAAEVPVAGDEANEKGRILLAKLCARDVVVVCGQASSHCVNFSARDLAAAWKRTTAGGLNEDVARRRMGSLVLLKDGMSPVTGFESEASKFLDDMAGMGISVRSCAE 296          
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Match: A0A7S3PLJ4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PLJ4_9STRA)

HSP 1 Score: 261 bits (666), Expect = 4.290e-75
Identity = 128/273 (46.89%), Postives = 172/273 (63.00%), Query Frame = 1
Query:  298 GGTALLIVDPQMDFHEGGSLDVPGATADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDKSGSHPTPFTKITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTTGHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGD-DSNERGKALLDQMCQLDSILLCGQASSHCVNYSARDLAAAWKHSAASSDENGVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTVRTCRDA 1113
            GG  LL++DPQ DFH GGSL +  A  DAERI++L+ ++ EKID I+VTLDSH    IAHP FW ++   HPTPFT +T KDV  G+W P + EHR   + Y  +LE    F L +WPEHCLIGT GH V   I EA+Q W  A++K V+Y++KG  + +E YS  KAEV V G+ D  +  + LLD++ + D +L+CGQASSHCVN++ RD+A  W  S+           ++ L +LRD  SPVPGFE+    F  DM   G+ + +   A
Sbjct:   19 GGVGLLLIDPQNDFHPGGSLAIADADKDAERISKLIKENLEKIDHIYVTLDSHQKYHIAHPLFWVNEQKVHPTPFTTVTKKDVENGKWKPTRAEHRIWGLHYVSELERKGNFALTIWPEHCLIGTPGHCVRGVIQEALQAWEDAKEKAVSYIVKGNNSKTEHYSAIKAEVIVPGEEDLTDLNRTLLDELSRHDKVLICGQASSHCVNFTVRDIADNWTDSS-----------LKKLYVLRDAMSPVPGFEEAETQFLKDMGKKGLVITSTERA 280          
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Match: A0A2E7CJX7_9PROT (Isochorismatase domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2E7CJX7_9PROT)

HSP 1 Score: 259 bits (663), Expect = 6.960e-75
Identity = 127/262 (48.47%), Postives = 164/262 (62.60%), Query Frame = 1
Query:  310 LLIVDPQMDFHEGGSLDVPGATADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDKSGSHPTPFTKITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTTGHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGDDSNERGKALLDQMCQLDSILLCGQASSHCVNYSARDLAAAWKHSAASSDENGVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTV 1095
            L I+DPQ DFH GGSL VPG+  D+ RIA  + D++  IDEI+V+LDSHH + IAH  FW D++G HP PFT I  +DV  G+WTPV  +  ++   YTK LE   +F +C+WPEHCLIGT GHAV P +N+A+Q+W   + K V Y+ KG   L+E YS   AEV +  D +      LL ++   D+IL+CG+A SHCVNY+ RDLAA W             K   +LVLL D TS VPGFE  AA F  DM  +G  +
Sbjct:   12 LFIIDPQNDFHPGGSLAVPGSNEDSGRIANFIVDNASLIDEIYVSLDSHHRIHIAHGVFWNDQNGEHPPPFTLIKHQDVISGKWTPVNPDLLEYAKHYTKSLEDKGRFIVCIWPEHCLIGTAGHAVVPVLNDALQEWVKIKMKPVEYIHKGMNCLTEMYSALAAEVPLQDDPTTSMNLELLKKLNTADNILICGEAKSHCVNYTMRDLAAHWT------------KEQSALVLLSDCTSAVPGFEDAAAQFEHDMKALGCRI 261          
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Match: A0A835YMN5_9STRA (Isochorismatase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN5_9STRA)

HSP 1 Score: 259 bits (663), Expect = 7.680e-75
Identity = 132/265 (49.81%), Postives = 165/265 (62.26%), Query Frame = 1
Query:  301 GTALLIVDPQMDFHEGGSLDVPGATADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDKSGSHPTPFTKITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTTGHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGDDSNERGKALLDQMCQLDSILLCGQASSHCVNYSARDLAAAWKHSAASSDENGVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTV 1095
            G  LLI+DPQ+DFH GGSL V GA ADAERIA  +  H + ID++ VTLDSHH  DI+ P FW    G+ P PFT IT++ V +G W PV +EH+ HC  Y + LEA  +FT  VWPEHCLIGT G  V P+IN A+QDWA+A+++ V YV KG   L+E +S F AEV +  D       AL+ ++ +   + +CGQA SHCVN S RDL   W   +A+            +VLLRDG SPV GFE EAA F       GVTV
Sbjct:   12 GAVLLIIDPQVDFHPGGSLAVAGADADAERIAAFLRRHEQDIDDVVVTLDSHHRFDISQPGFWVSGEGNPPAPFTAITSEQVKLGLWKPVLEEHQAHCQRYCEALEARGRFTHVVWPEHCLIGTVGQTVEPRINAALQDWALARRRAVHYVAKGANPLTEHFSAFAAEVPLDSDPGTALNAALVARLRRRARVYVCGQALSHCVNRSVRDLVEHWAPRSAAD-----------IVLLRDGASPVAGFEGEAAAFVDAARAAGVTV 265          
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Match: W2Q9Q4_PHYPN (Isochorismatase domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2Q9Q4_PHYPN)

HSP 1 Score: 251 bits (642), Expect = 7.070e-72
Identity = 121/268 (45.15%), Postives = 162/268 (60.45%), Query Frame = 1
Query:  298 GGTALLIVDPQMDFHEGGSLDVPGATADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDKSGSHPTPFTKITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTTGHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGDDSNERGKALLDQMCQLDSILLCGQASSHCVNYSARDLAAAWKHSAASSDENGVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTVRT 1101
            GG  LL++D Q+DFH GGSL +P A  DA RIA  +  HS+K+ ++ +TLDSH    IAH  FW ++ G  P PFT ITA+DVA G W P     +++ + YT  LEA  KFTLC+WPEHCLIG+ GH + P +  A  +W  A  K V Y+MKG  + +E YS  KAE  +  D +    +AL+D +   D +++CG+A SHCVNY+ RDLA AW             +R+  LV+L D  SPVPGFE+    F  DM   G+T+ T
Sbjct:   18 GGLCLLVIDQQVDFHPGGSLAIPTANEDAARIAAFIRQHSDKLKQLVLTLDSHQRYHIAHGIFWENEEGKSPDPFTLITAEDVAAGVWRPRDPSLKEYVLAYTTALEASGKFTLCIWPEHCLIGSPGHNIVPNVLAAAMEWTKASLKPVQYIMKGSNSFTEHYSALKAEFELSYDPTTSLNQALVDTLKLADKVVVCGEAISHCVNYTVRDLADAWP-----------AERIHDLVILTDCASPVPGFEEAGEEFLRDMAAKGLTLTT 274          
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Match: A0A6S9E012_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E012_HETAK)

HSP 1 Score: 251 bits (642), Expect = 7.070e-72
Identity = 130/274 (47.45%), Postives = 170/274 (62.04%), Query Frame = 1
Query:  301 GTALLIVDPQMDFHEGGSLDVPGATADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDKSGSHPTPFTKITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTTGHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGDDSNERGKALLDQMCQLDSILLCGQASSHCVNYSARDLAAAWKHSAASSDENGVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTVRTCRDAFPL 1122
            G  LLI+DPQ DFHEGGSL V GAT D+ RIA L+ +   +IDEI VTLDSHH   I+H  +W + +G     FT+IT + V  G W+P + E ++H   Y ++LE   +F   +WP+HCLIGT GHAV P +NEA+Q+W+VA+ KT+ Y+ KG    +E YS FKAEV +  D S     A+L+++   D +L+CG++ SHCVN+  RDLAAA   SAA   E   R      VLL DGTS V GFE   A    DM  +GV   TC +A  L
Sbjct:    3 GIILLIIDPQNDFHEGGSLAVAGATDDSTRIANLIKECGSEIDEIMVTLDSHHACHISHGVYWKNSAGEPAPDFTEITLQSVKDGTWSPARDEDKEHVEWYLEQLEGTGRFKHIIWPQHCLIGTPGHAVVPVLNEALQEWSVAKHKTIKYLAKGMNVKTEMYSPFKAEVQIPDDPSTGLNTAVLEELAAADRVLVCGESFSHCVNHGLRDLAAAL--SAAGGAEACAR-----AVLLTDGTSCVAGFESAGAQLVEDMRALGVQTATCEEAAKL 269          
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Match: A0A6A3TN12_9STRA (Isochorismatase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TN12_9STRA)

HSP 1 Score: 249 bits (635), Expect = 6.070e-71
Identity = 121/268 (45.15%), Postives = 159/268 (59.33%), Query Frame = 1
Query:  298 GGTALLIVDPQMDFHEGGSLDVPGATADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDKSGSHPTPFTKITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTTGHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGDDSNERGKALLDQMCQLDSILLCGQASSHCVNYSARDLAAAWKHSAASSDENGVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTVRT 1101
            GG  LL++D Q+DFH GGSL +P A  DA RIA  +  H+ ++ ++ +TLDSH    IAH  FW +  G  P PFT ITAKDVA G W P     + + + YT  LEA  KFTLC+WPEHCLIG+ GH + P ++ A  +W     K V YVMKG  + +E YS  KAE  +  D +    +AL+D +   D +++CG+A SHCVNY+ RDL AAW            + R + LV+L D  SPVPGFEK    F  DM   G+T+ T
Sbjct:   17 GGLCLLVIDQQVDFHPGGSLAIPTANEDAARIAAFITKHARQLSQLVLTLDSHQRYHIAHGVFWENAEGQSPEPFTLITAKDVAAGVWRPRDASLKSYVLAYTTALEASGKFTLCIWPEHCLIGSPGHNIVPNVHAAALEWTKCSLKPVQYVMKGCNSFTEHYSALKAEFELPYDPATSLNQALVDSLKLADKVVVCGEAVSHCVNYTVRDLVAAWP-----------QHRCKDLVILTDCASPVPGFEKAGEEFLRDMAAEGLTLTT 273          
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Match: A0A3M6VUV5_9STRA (Isochorismatase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUV5_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.000e-70
Identity = 119/268 (44.40%), Postives = 160/268 (59.70%), Query Frame = 1
Query:  298 GGTALLIVDPQMDFHEGGSLDVPGATADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDKSGSHPTPFTKITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTTGHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGDDSNERGKALLDQMCQLDSILLCGQASSHCVNYSARDLAAAWKHSAASSDENGVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTVRT 1101
            GG  LL++D Q+DFH GGSL +P A  DA RIA  +  HS K+ ++ +TLDSH    IAH  FW +  G  P PFT ITAKDVA G W P     +++ + YT  LEA  KFTLC+WPEHCLIG+ GH + P ++ A  +W     K V YVMKG  + +E YS  KAE  +  D +    ++L++ +   D +++CG+A SHCVNY+ RDL AAW            + R   LV+L D +SPVPG+EK    F  +M   G+T+ T
Sbjct:   23 GGLCLLVIDQQVDFHPGGSLAIPTANEDAARIATFIQKHSRKLKQLVLTLDSHQRYHIAHGIFWENAEGKSPKPFTLITAKDVAAGLWKPRDPNLKEYVLAYTSALEASGKFTLCIWPEHCLIGSPGHNIVPNVHAAAMEWTKLSLKPVQYVMKGANSFTEHYSALKAEFELPYDPTTSLNQSLVESLKLADKVVVCGEAISHCVNYTVRDLVAAWP-----------KDRRSDLVILTDCSSPVPGYEKAGEKFLRNMAAAGLTLTT 279          
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Match: A0A7S2UVL2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVL2_9STRA)

HSP 1 Score: 248 bits (632), Expect = 1.280e-70
Identity = 127/267 (47.57%), Postives = 161/267 (60.30%), Query Frame = 1
Query:  307 ALLIVDPQMDFHEGGSLDVPGATADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDKSGSHPTPFTKITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTTGHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGDDSNERGKALLDQMCQL-DSILLCGQASSHCVNYSARDLAAAWKHSAASSDENGVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTVRTC 1104
            A LI+DPQ DFHEGGSL VPGA  DA RIA L+ D+ +KI  I+VT+D HH + IAH  FWT+     P  FT IT  D+  G W   Q E++ H   YTK LE   +F L +WPEHCL+GT G+A+ P INEAIQDWA+     V Y+ K Q+ L+E YS F+AEV +    S     ALL ++ Q  D +++CGQASSHCV +S RDL   W H +         + +  ++LL DG SPV  FEK    F  +M   GVTV  C
Sbjct:    9 AFLIIDPQNDFHEGGSLAVPGADEDAVRIANLINDNRDKIASIYVTMDCHHRMHIAHKGFWTNDQNEMPAEFTMITNADIKSGLWKAAQPENQMHVEWYTKMLEEKNRFKLTIWPEHCLVGTKGNAIVPSINEAIQDWALEYSTVVNYIQKTQHCLTEMYSVFQAEVPLPDVPSTGLNTALLAELGQTYDRVVVCGQASSHCVAFSVRDLVEHWPHYSGD-------RPISDIILLSDGMSPVATFEKAGEEFVNEMKDKGVTVLKC 268          
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Match: A0A225UP94_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A225UP94_9STRA)

HSP 1 Score: 247 bits (631), Expect = 2.110e-70
Identity = 120/268 (44.78%), Postives = 160/268 (59.70%), Query Frame = 1
Query:  298 GGTALLIVDPQMDFHEGGSLDVPGATADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDKSGSHPTPFTKITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTTGHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGDDSNERGKALLDQMCQLDSILLCGQASSHCVNYSARDLAAAWKHSAASSDENGVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTVRT 1101
            GG  LL++D Q+DFH GGSL +P A  DAERIA  +  H+ ++ ++ +TLDSH    IAH  FW +  G  P PFT ITA+DVA G W P     +++   YT  LEA  KFTLC+WPEHCL+G+ GH + P +  A  +W     K V YVMKG  + +E YS  KAE  +  D +    +AL+D +   D +++CG+A SHCVNY+ RDL AAW            ++R   LV+L D +SPVPGFEK    F  DM   G+T+ T
Sbjct:   17 GGLCLLVIDQQVDFHPGGSLAIPTANEDAERIAAFIRTHASQLKQLVLTLDSHQRYHIAHGIFWENTEGQSPEPFTLITAQDVADGVWRPRDSSLKEYVFAYTTALEASGKFTLCIWPEHCLMGSPGHNIVPNVLAAAVEWTKVSLKPVQYVMKGSNSFTEHYSALKAEFELPYDPTTSLNQALVDTLKLADKVVVCGEAISHCVNYTVRDLVAAWP-----------KERRHDLVILTDCSSPVPGFEKAGEEFLRDMAAEGLTLTT 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig900.16856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF00_ECTSI2.120e-11966.06Isochorismatase domain-containing protein n=2 Tax=... [more]
A0A7S3PLJ4_9STRA4.290e-7546.89Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A2E7CJX7_9PROT6.960e-7548.47Isochorismatase domain-containing protein n=1 Tax=... [more]
A0A835YMN5_9STRA7.680e-7549.81Isochorismatase domain-containing protein n=1 Tax=... [more]
W2Q9Q4_PHYPN7.070e-7245.15Isochorismatase domain-containing protein n=12 Tax... [more]
A0A6S9E012_HETAK7.070e-7247.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6A3TN12_9STRA6.070e-7145.15Isochorismatase domain-containing protein n=3 Tax=... [more]
A0A3M6VUV5_9STRA1.000e-7044.40Isochorismatase domain-containing protein n=1 Tax=... [more]
A0A7S2UVL2_9STRA1.280e-7047.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A225UP94_9STRA2.110e-7044.78Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig900contigH-paniculata_contig900:14915..28800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score384.0
Seed ortholog evalue6.3e-104
Seed eggNOG ortholog2880.D8LF00
Hectar predicted targeting categoryother localisation
EggNOG free text desc.hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
EggNOG OGs2QW5A@2759,COG1335@1
Ec32 ortholog descriptionIsochorismatase-like
Ec32 orthologEc-21_006180.1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size4024
Cds size900
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931124.5653415-UTR-H-paniculata_contig900:14914..151391622931124.5653415-UTR-H-paniculata_contig900:14914..15139Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig900 14915..15139 +
1691481601.3698876-UTR-H-paniculata_contig900:14914..151391691481601.3698876-UTR-H-paniculata_contig900:14914..15139Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig900 14915..15139 +
1622931124.6652358-UTR-H-paniculata_contig900:25901..288001622931124.6652358-UTR-H-paniculata_contig900:25901..28800Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig900 25902..28800 +
1691481601.462498-UTR-H-paniculata_contig900:25901..288001691481601.462498-UTR-H-paniculata_contig900:25901..28800Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig900 25902..28800 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931124.5774336-CDS-H-paniculata_contig900:15139..153731622931124.5774336-CDS-H-paniculata_contig900:15139..15373Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 15140..15373 +
1691481601.3816006-CDS-H-paniculata_contig900:15139..153731691481601.3816006-CDS-H-paniculata_contig900:15139..15373Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 15140..15373 +
1622931124.5890312-CDS-H-paniculata_contig900:15851..159771622931124.5890312-CDS-H-paniculata_contig900:15851..15977Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 15852..15977 +
1691481601.4020534-CDS-H-paniculata_contig900:15851..159771691481601.4020534-CDS-H-paniculata_contig900:15851..15977Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 15852..15977 +
1622931124.6011856-CDS-H-paniculata_contig900:17321..173991622931124.6011856-CDS-H-paniculata_contig900:17321..17399Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 17322..17399 +
1691481601.4137313-CDS-H-paniculata_contig900:17321..173991691481601.4137313-CDS-H-paniculata_contig900:17321..17399Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 17322..17399 +
1622931124.6140783-CDS-H-paniculata_contig900:23580..236231622931124.6140783-CDS-H-paniculata_contig900:23580..23623Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 23581..23623 +
1691481601.4226477-CDS-H-paniculata_contig900:23580..236231691481601.4226477-CDS-H-paniculata_contig900:23580..23623Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 23581..23623 +
1622931124.624893-CDS-H-paniculata_contig900:24190..242721622931124.624893-CDS-H-paniculata_contig900:24190..24272Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 24191..24272 +
1691481601.432308-CDS-H-paniculata_contig900:24190..242721691481601.432308-CDS-H-paniculata_contig900:24190..24272Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 24191..24272 +
1622931124.6386902-CDS-H-paniculata_contig900:25173..254291622931124.6386902-CDS-H-paniculata_contig900:25173..25429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 25174..25429 +
1691481601.4422944-CDS-H-paniculata_contig900:25173..254291691481601.4422944-CDS-H-paniculata_contig900:25173..25429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 25174..25429 +
1622931124.651113-CDS-H-paniculata_contig900:25820..259011622931124.651113-CDS-H-paniculata_contig900:25820..25901Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 25821..25901 +
1691481601.4526553-CDS-H-paniculata_contig900:25820..259011691481601.4526553-CDS-H-paniculata_contig900:25820..25901Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig900 25821..25901 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig900.16856.1prot_H-paniculata_contig900.16856.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig900 15140..25901 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig900.16856.1

>prot_H-paniculata_contig900.16856.1 ID=prot_H-paniculata_contig900.16856.1|Name=mRNA_H-paniculata_contig900.16856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=300bp
MEEGLTGGSAVERSQDTGDSKVVFGGTALLIVDPQMDFHEGGSLDVPGAT
ADAERIAQLVADHSEKIDEIFVTLDSHHCLDIAHPHFWTDKSGSHPTPFT
KITAKDVAVGRWTPVQQEHRDHCIEYTKKLEAGRKFTLCVWPEHCLIGTT
GHAVHPQINEAIQDWAVAQKKTVTYVMKGQYTLSEQYSCFKAEVSVVGDD
SNERGKALLDQMCQLDSILLCGQASSHCVNYSARDLAAAWKHSAASSDEN
GVRKRMQSLVLLRDGTSPVPGFEKEAANFFADMVGMGVTVRTCRDAFPL*
back to top

mRNA from alignment at H-paniculata_contig900:14915..28800+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig900.16856.1 ID=mRNA_H-paniculata_contig900.16856.1|Name=mRNA_H-paniculata_contig900.16856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13886bp|location=Sequence derived from alignment at H-paniculata_contig900:14915..28800+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGTTCTACTCTGGCACCTAGGGCATAAACTAGTGCGGGCGTTGTGTTTA ACAAGTGGTCACGTGCCTTGACAGACTGCACGCTCTAGTTAAAACACGGG AATCAAGGAAGAGGGGAAGAGAGTGCGGGGGAACTACCGTTAGCTGGAGA GAGAGAGCTGCTCATTGACTGCCCCGCAGCAAAGTTTGGAGGGTTCACCT ATTCATACTACTCTGCTGCAGCACGATGGAAGAAGGACTTACTGGTGGAT CTGCAGTGGAACGCTCCCAAGATACTGGAGACAGCAAGGTCGTGTTCGGC GGCACGGCGCTCCTGATTGTGGACCCTCAGATGGACTTCCATGAAGGCGG CTCTCTAGACGTGCCAGGCGCGACTGCAGACGCGGAGCGCATTGCGCAGT TGGTAGCTGATCATAGCGAGAAAATCGATGAGATATTTGTTACGCTTGAC TCCCACCATGTGAGTAGTGTTGGTAATTTTTGAGGTTTCTGTTTCGCAGC TTTTTCGTAATCCAGTACACCGTACATCGAGTAACTTGTAGGTCTGTCTC TGTTCTTCATGATCTATGGGGAGAAGCTAACACTGTAACTTTTGGTGGTA AATTCGATGAGTTGCATGGATTAAAGAGCCTAGGACCTCACAGTGCAGCC AGTGCGCTGTATCTTTTTGTGAGATTCGCTCAGTTGCCCTCCTCGTTGTG GCAGCAGTAGTCGTGAAGGACATACAGAAGCATCAAACAGTCCACGAGAC AGGGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAAGAAAGAGC CAGTTTTTACAGGCATGTTTAGTTTTCTTGTTTTCTTGTCCCTTTGGCCG ACTACACAGAAAACTAGAATGGTTACCATTTTCGAGATGCTTCGCTAGAT CGCTGCTCCTTTTCACCATCCGCACCACGTGTTGCAGTGCTTGGATATTG CGCACCCACATTTTTGGACGGACAAGAGCGGATCTCACCCTACACCGTTT ACTAAGATCACAGCAAAAGATGTCGCCGTTGGGAGGTGGACCCCAGTTCA GCAGGAGCACCGGGTGAGTAGTGAGAGGAAATCAGTCAAGTTTCGTTTTC ATTTTCTAACTGTACAGACTAATTTGGACGGGAAAACCGCAGCACTGTGC CCTGTTGGATTCAATGTTTGCAAAAAAGGATCGTACACCGTTGGATACAA ATATTCCGTATGCGCGAGTGCAGGGCATACGGATTCCTTGCTGCTGTAGT GGGCTCTTTAGGGCCACTTCATGTGCAGAGAGGTCGGACGAAGGGTTCAC TTGGACATGACTTCTCAAGTGGTCTCTCTCTCATCCTGTATTTCCGTTGC CGACTCGAAATACAGTCTGAAGCAACAGTTACTTCGTCATTTTGAGGTTC AAAGAGCGCGATATTTCGGTTGTTACAGTTTTCAGTCCCTTTGCATGTCC TCTGTTCTTTTTCGCATGTCTGCCGTGCCTTCTCGATCTGGCGACTGGAA GCAGCATCTTTGAAACGTTGCCCACGCCTTTTGTGTAGCCAGGGCAGCAT GTGTGCAGAAGTAATTCCTACAGTTGCTCCTGGCAGTGGTGACCCGTCCT GCAGCTATAGCGCAGATTTTTGAGAGAAAGAATGATATCTCAACCTTTTA ACCGAGCCTCTTTACGTTTTCGGGGGTCTCCGTGCCGTGGATATTTTTGT ATTCAACATGTGTCATTCTAACACCGAGACTACCCGCCCTCGAGACAATT ACCCATATAAGTCTGTAGCAGAATAGCAGAGCTCGGTATTTTCTGTCTCA GGTAAGTTGTTAGCTGTTTGTCTTCCTTTTCATTGCCTACTTTTGAATAT AAATCCAACGGCGATTCCTGTGTTTCGTGTTCAGTTATTTTTATCTCGGC GGCGACCAGTTTCCATACTAAAAAAACATGTACACCCGAGGTGTGCTCTA GTGATGCCATCGTAGTGTGTATAGTATATCTGTGTTGTCCTCGTTGCTGC TATGTGAACTGCAAGCTATAAGAACGCACCAGACACCACCTCAATAGACA GGCAGTAAACACAAATATTGTACGGGTACATGGCCTTGGTCAGGATGAAA GTTGGCAGTAAACAAGCAACAGAGAGGCGTATAATCGATGTGATGTTTTG GAATCGTGTCTAGATATGAAAAGCAAGATAAGCCAAGAACAGGATATTAA TAGTTTTTATTTTATTTTATTGACTCTGAAAATGACACGTGTCCACAGAT GAGATCACAGAATAATTAGCTATATGATTACTTTCATGTATAGTGAGTGA GTAGCGCATGTAATTCATGGTGAGTACCCATCCGCCAAGATCAATCATGA CATAATGTCATCTTCAGCGTATCTTCGCTTCACCACATGCTGTGTGATAC CACCCAGGACCATTGCATCGAGTACACCAAGAAACTGGAGGCGGGACGGA AGTTCACCCTGTGCGTGTGGCCAGAGCACTGTTTGGTGAGAGAGCGCACA TATTATGCAGGTGGTTCTATATTTGAGTCCACACTTTTCTATTTAGAAGG GCCTCTAGCGCGCGATTTATTTGGAACCTTTACTGCCGGAGAGTGAATGA GATACAGTCAAGTAAAATAGTGTTCAACATGACTACGGATTGCAAATCTG AAAGCCTTTCGTCTTATGTTGGTTAATGATTTCCGACTGTGGGGCACTAG TGTTCACCACTGGTTGTCGAAAGTTCGAAATTCCTGCGATGGTTTTCGCA GTACCTGGTGTTACTGGAGGGTGCTGCCCGGTCCGTCCGCGAATCTAGGC GAGTCTGGCCCCAGGTTCGTTGCCAACCTCCTGAGGGATGCAACGTTCCA GCGATTTTAGACACTCTCGGGGGGCGATTTGACATGGTGTTTTGAACCCA GATTAGGTCCGGTAAGATAAATTTTAATAACGTCTACTGGTACCTAGTAG TGTGGTTCTTTCAACGTTGCATATGGAGATTTCAACTAGGACAAATTCAA GAGTTATTTCGAGAAACGGTGGTAGACACCTTGGTAGAAAAGCCTCTTTT AGTGAGAGTGGGAGGTAGTTTATTGCTGTTTGGTCTGACGGAGGGCCTTG GGGGACGAAGAGGACAGATGGCAAACGTTTGTGTTCACCACAAGAACTTT ATTAAACCTTCGAGCGCCTGTCTTCGCGCAATCTCTACTTATCTCCACCT GGGACAGGGGAAGACAAGAAATTTATTCGATGCCTCGTGACTCGACGGGT TTGGGCTTTGTGACGTTAACGTAAAGACAAGACCTTTGCAGCTGTTAGTA GGGTAAAGTCGTGAGAGTGCTCGATTGGGCGGCAGACAGCGGGCTAGTGT AGTCTTTGCCCCCCAACCAATCCGTAACAAGAAACATATTTAAACAAAGT TCTATGTAGACGATTAATGAGATGGAGGCGGGGTCGACTGATAGGTGCAA GAGCAAGAGGCTCGAATACCCCAAACCTGACTTCAAGATGGAGAGGATGG GGGAAATGCGAGAGGGACCTGCCCAGCACTCAAAAAGCTGAAAAAGCTGT GGAATATTCTCGAAGAATTTGCTCTGATGGACTCGCGGTACGCAACATAG GCGCGGCAAGATTCATGGCACAAGAGAATCATCGAGTGTTGCAAGAGAGA ACAGCTGAAGGCGCAAGTCAACAGCGCGAGAGGCGCCGGCAGCCTTGGGA GCAGCAACAGAAGGCGCGCGACCAGCAGTGATGAAGTAGAGGAGGAGATG TCTGACTGGATCAACCACAACCGTCAAATGTCCCGTGGCGTCGGTAGGCG GGACGTCTTGCACAAACTGTTGTAGCTTAAGCCAGCGAATGTTCTGAAGG CGCAAGTCAACAGCGCGAAAGGCTCCGGCAGTCTTCGGAGCAATATCGGA GGGCGTGCGTCCAGCAGGGCCTGAGGTGGAGGAGGAGATGTGTGACTGGA TCAACTACAACCGTCAAATGTCCCGCGGCGTCGGTAGGCGGGATGTCTTG CACAAGCTCTTACAGCTTACCTTCTCGGAGGACCTTCGCGAGTTGAACGT CTGTCTTTGGAGTTTTGGATGGTTTCAAACACAAATAGTCGCAAAATTTT AGAACGGTAAAAAGTGAGTCGCTTCAGTATGGTGCCTCGGCCCCAGAGCG AACCTATGTAAAATTCTAGACAGTCGGGGCGGGGCGTCTTGCTCATCTGT CAAACTATTTTGTGGCGCAGCTGTTCCCTGTTTTTGAAACACTTCGTTGG GGCAGTCTTTATGTTGAGTAACGTTGACCCATACACTGGCAGATCTGTTG ATCCCATCTTTATAATGGGACGCAGATACGACATTCCCAATATTTCGTCT GTGACACATTGTACGACAGCAAAGTCGTTCACTAGGATAGCCTAAAACAC CTCTACATTCCTCTCCTGGTGCCCTGTTGTACGAAGTACACAACAGACGT CCCGCGTACTGCGATGGAGGCCTTCAGCTTGGATTTTGCCATTTTCAGCT GTACCTGTGGATGATGACAATTTCTTTTTCCCCCCGTCTCGTACCATCCG ATCGCCTTCTGTGACGGGGATTTTTTTTCGATTTGTACTGACTGCAACAC AGGTGGGCTGGCAAGTATCGTATTTCCTTGTCGTAAAGTTGTAAAGTGAT GGTGAACGGAGTGATAAAAAGCGGTTCGTAGCGAGCAGTTACTACTATTT GTTGACTGCCAACACCATCTCGCACATTCAAATGAACAAGTTGTGTGGTG AGTAACCGATTGCCTGCAAATAGCTACGTCTCACTTAACAATGATTGTTC AAATATCAGCCGTTTTGGTTGAAGTCGTCTGGCGATTTCAAACTTTCTCC ATTTTTAGTTTTGACCACCAGGCACTTTTTTGTTCACTTCTAAAAAATGA GAAAATCGAAAAAGGCGCTCCATTTTCCTCCTTTGATATTGGTTCCTTAT CTCAGGATGGGGGGAAGTTGTTGAAAAACCCGAAGCACCAGAAAACTCCC ATCTCAAGGCGGAGAAATCGACGGGAGTAATAATTTATTTTCCCACTATG ATCCCGAGTTATTGCGGTTGAATAAAAACAGGGCATGTTTGTTTTTTCGA GGGGAGTGTGCTCTTAAGACTAACAATTTAACAGGGGGACCGGACGTGTC GTGGTGTCATTAACCAATATATGTATAATTTTGTCGAAAATTCAAATTAA TAATAATAACCTAGAAAACACTAAAAAATTGATTGTTCAGAAAAGGTGCC ATTTGCGAGTTTTGGGGGATGATGTACCCTACGAATTAAAGAAAAGGCGA CAAACAAACGCTCTCATCGTGCGACGCTGATTTATCTTCTTTTTTTTTTC CAGGAAAACTCTGGTTTTACTGACGTATGTCCGACTGAAAACAAGGGATC CAGCACTGCCCATTCCTAGACGTAAACCTATATATTGCAGTACTGAATTG TAGATAAGGTCCCCCAACACCCGAGAGGTTGAAGAAAAGTTGTGTTCCAT GACGGATTGGTCACGGAAGAGGAAGATATGGCGAGGTGCCACCGGGGTCA TCTAAGCTCGCACGCTACCCTTGCCACAGCGAGGCCGACGCTTAAGGCTT GGGTGGAATCCCGAGCGGCTTCGACGCGTATGGCAGAGGACGGGGATGGA GGTAGTAGGTTGGACGGCGCGGTACCAGGCTGCGCTTTGTGGCTTGACTG TGGGTGATGTAGGTCGAGGGCAACCGTACGCGGGTAGCGCGGGAGTTCTT TGCAAATATCCACCGTTTGCCAGCGATTCGTTCGCCATTAATGCGCATAT ACTTTCAAAGTATGCGTGTAACATGCGAACGTGTCGGTGCGTGTGGTGTG ATGGGATACTCCAGGAGAGCCTCCAAAATGTTTTCCTGAGCTCATTTGGG ATGACTCGACTCACATCGGGAAAAAAATGAACCGCTTCGGACTGATCGTA AACAATCTCCGCGACTCGGCACAACATTTTTGCCTAACAATTACACGATT TTCCATAAAAATAAACTCGGCGGCTACGACCATAGCTCCTTGGCTTGGCA TTTTTTTCCGTGAGGTCCTGTATTCGCCGCGAAAAGAGACATGAATTCCC CCCAACATATCATAATTGGGAAAGTGCTCTTGTCGTTTTGTCTGCAAGTC TTACACTATTTTTGCCCACAGTAGTTTTAGGTTGTTGGCGAAAACAAAGA CCGTTTCACATTTGGATTTCCACGAACGGTTCATCGTTTGTTTTTTTTAA TCGATATTTGGTATTTTTCGTGAAATCCGAGAAATATCCGAAAGTTGAAT TCGAAAATTGAATCCGTAAGGACCTTCAAAACACATGGTGTCTGGTCAGC ACTACCCGAGAATGAAGCTGATGCCTGAAACAAGCTGTGAGTTATTTGTC ATCACTTTTCACTTGTCACTTGTCGATTATTCCACCACCGTTTGTCTGTG AGCTAGCTGGCTGTACATTTTATCCATGCATTGATGTTGCGATCGTTATC TGCATGCCAAGACCGTTCTTTCCTGGCTCCCCCTTTTTTTTTATCATTAT TACTCCCTGAGACCCGTGAGCACAGGGTAAATGGCGATTTCGTGGACCTG CAATAGTACACCGTACTAAAACGAGCAATAAGAACGAATAGAGCCCCATA TTACAGCAAAAAACGAAGTCGCAGAAAAGGTAAATGAACATAATATACAA AAACAGTCAACCAACGCGAAGCGAAAGACACACGCACCAAGGATACGCTG TCCGTCAGGGCCGATCGTTTTGTAGAGAAGAGCAACGAGGCAAAGTACTC TCGCACGTGACGGCTGTGAGTCTTCCCTACCTCGGCTTCGTTGCATGCAT ACATGGAACGAATGGCTCCTTCCTCCACAACACTGTGTCAGTGGGCGGCA CCGACTTTTGCATGCGCCTCCCACACTGTGATAGGGATGCCAAAGTCGTT GATGCCGTCGATGACATATTGTGGCCATTGTCTCGGAGGCCGCCCCCTGC CCCTTGTTCATCCGTCAAGTTCCCTACTTATCATGGCCTTCGGCAGGCGT TGGTCCTCCATGCGCAAAACGCTCCCCACGAACCGAAGTCGCCGCTTCTT CTCGGTCGTCTGGATGCGCTCGCACCCTGCCCTCGGCGGTACGGCTCGAG AAGACAGCGCGTGATTTGTAGGGAAATATGTAAATGTAAATGCCAAGGCC CAATAGAGAGGTGACAAAGACTGCCTGTTTGCTCAACCTCCCTACGGACG GTTCTACGCGTGTGTATTTTTCTCTTTTTTGCCTGTCTTTTATTTAGTCT GGAATATTTTGATTTTTTCGGAACGAAAAACTGGATTTTTTTGCCTATCC ATAGTGATCCTAAACTTTTTCTTTTTTTTTCGATTATTCAAAACATGTTA CCGGCGTGTTATCGGTAAAAAAAGAAGAAGGAAATACAGAGTGGAAAAAA AAGGGGAAAGCACGCATGTCAAGGGCGCCTCTTCGTTAAGTCCCGTTTCC CAAGTAGATTACAGTAAACCCCACTATACATATTCCTATAGCGTACAAGA CGCGAGTAGCACCGGTATGACTAAAAGAAATTATAACTTGAAAAGGAAAA CAAAAACACTGTCCAATAGGCGTCTGATAAATCAGAATTGTCACTTATTT TTGCAGTATCTTTACTCGGCCGGTAGCACAACACTGTCAATGAATTAATT CGTTCGTGCTACTGCTCTCAATTTTTGGTGCGGAGGTTTCACCTGCTGTA TCGCTGGAGACATCCATTGTTCAGATGCAACGCCTCGCAACGCACAGCAT GGACAACTACTTGGGTCACTGGGTCACTTCATTGACCACAACGAACGCCG CAGCTTTATATTTCCGTGTCGTACTCCAGCAACTCGAGGTCATCCCTTGC ACCCCCCCCCCCCCCATCGTTTCGCGGCGGGACTGTCGGATACCTTTTTG TTCCGCAATAGCACTCGACTCTATTAATAATTATTATTCATTGTAATTAT ACCCGTCTCTAAAGGGTTAGGGCTCCCGTTGATCGGGCCTGTGCAGAATC CTCGCCAAGTTCTCACTTGGAAAAACATAAGACGTGACCTTTAATACGTT AAGAATGTAAAGAGCTCCTCCCACTGTTCAGACAGTGCGTGCAGCAAAAG AATGGAGTTTGCACCCAATGCCTGCAGCGCTTGGGGTGGAGAGCCACCGC TGTCCAGGCAGACGGTTTGGTACAGACAGTGCATGCGGCACGAAGAGGTA GCTGCCGGGAGGTTTTGTCCACAGCAACTACAATTATCGATATTTTTTCT CAGAAGCCATTTTTGTTCTGATACTATATTGTGGGGTCAGATGTACCAAG CAGGACAAGCCACTGCTGGCAATTATTGTTGCTATTTAATTATTACGATT CAGACAGTAGCCGGATCCCTCAGACCCATGGGCACAGGGTAAATGGCGAA TCGGGTGGAAATGCAATAGTATAGTATACCCTAACAACAATAGTTATAAA GATGAACTGCCGTGGATAAGATTTTTTTTTAATAAATATTACCACAAAAC CCTCAAGTTCAAAATTCCACTCACGTGTGTTCAGCTGTTCGTTACCTAAT GCTCTCCTCCGTTTGCCCCACGATCTGGTCTGGCTTTCTGGTTATGTGTC CTCTCGGTGCCTTCAGATTGGCACAACGGGCCACGCGGTACACCCTCAGA TCAACGAAGGTGAAGCAATAGAGAAACCCTACACTATGCCGGGGGCTGCT TCCCCATTCGTCAGTGTCAATATATAGTTATTTTTCGGTGGGGTTGCATG GGTTTCGTTTTCCTCAAAGCTCACATCGCAGACCACTATTTGGTTGTGAC CCTCTTCTACCCGTGCTCTAAATTGTAATGTTGCTGTCTTGGAGTCTCAT CATTTGTATACTGGTGTGACTCCAGCGATGGCGTCCTGTTTGTGGTAACA TGTCATGTGCTTAGTGGTCGATGGAGTTAAACAATTGCTGCCTCGCTGAG CGACTTCCGCCGGAATTATTTTCAAGGTGCCGCAACGGACTTATTCGCTT GATGACGTTTGGGAATGCTTGTCGATACCGTCAAACCACTGGTGTCTGGC GTCGCGTCCGGCGATGCGGCCGCCGAAGACTTTTTGCTCGATTATTGCTG TCTGGGTTCAAAACATGGTAAACTCGAGCGTTGTACTTTGCATCGATAAT ACGATCTCCGATTCTTTAATCTCTCTGATTGCTCCATTCTGTCACGTTCG CCCCCCCAACGCACGGACAATGTCAGCTATTCAAGATTGGGCGGTCGCGC AAAAGAAGACCGTGACGTACGTGATGAAGGGACAGTATACCCTCTCCGAG CAGTACAGGTGAGCGAGTTATCCACCGTCATGTATATGCATATTTTCTCT GTACCGTAAGTAAAGATGGTTGAGTTTATAGGGGCACGTAACGATCTCTG ATTGTTTTTGATTCGTTATAACCCTACATGTGCTGGGGGTTGATCCCCAG ACTTTTCACCGAAATTGGCGAAATCCATCGGGAACGCGAGCGGCGGAAGA GAGAAAATCGGCCCAAAAAAGGTACTAATTTTTCCCCATTTCGTTTTTGC CAATGAAAAAGTGGAATATCGGGTAAAAAACTTGGGAAGTGTTCGAAATG AGCGGCCGGTAATTCTGAAACACAAGTCGGAATGCCCGTCGGAATAGGGC ATGTGAGTCTATCAGATGAGACTTTAGCTTTCCGACGATTTGAATCGCAG CCTTCGAACACTCGTAGACTTGGAGATATAATCTGCCAAACACAGCCGAA TTTTCCTGTAGCACGGAGGGAGTATTATTATAGATATCCCAGCGATACTG TCGGATATTTCCACCTCCAGGTTTGTCGGATAGGACGATATCGCCAGCGA AAATAAATCCCGGTCATGAGAACAAATTACAATTGTTCGTGTTGAGATTT TACATGCGCGCAGGTACAATGTTTCGAGGTTCGTTGCAGCAAGTGGGACG AGCTGGCACACGAATAAAGTGAGCGACGAGCGGAACAGAAATTCAAAACG CGTGCTTGCGGAAATAGCGCCCGTTTGATTTACTCCCGTCCCACGCGCTG CGTCCTCTCGAGGACATTCGGTCAATTGCCTGACGATTACAGTATGCAAC CCATGACCACGCCCCCTCCCCCCGTCCAACGCACACCTTGTATATCATGA AATCGAAAGAACCACCTCTTTCCCCCCCACGCGTGTTATAACCCCTCTTA AATCTTTAGCTGCTTCAAGGCTGAAGTATCAGTCGTGGGAGATGACTCCA ACGAACGTGGTAAAGCTTTGCTGGATCAGATGTGTCAGCTAGACTCGATC TTGCTGTGTGGCCAGGCGTCTTCCCACTGCGTGAATTATTCCGCCCGTGA CCTCGCGGCCGCGTGGAAACACAGTGCAGCCAGTTCAGACGAGAATGGAG TGAGAAAGCGCATGCAAAGCTTGGTATTACTGCGGGATGGAACTTCACCA GTACCAGGTTTCGAGGTGCGATTGACGGGGTTTTTGGGATTCGGGAGGTT GGCTTGGGATAACACCGCATGGGAGGGGGGGTTAGTGATGAGCTAAAATG AAGCAGGAAGGTGCTGAATTTGTTCAATAGTGCGACAAGTTACGGACACA GGTATAGTGCTGCCCGAGAGGAAACGGCTAGAGTTGGACACGATGATTCC AAGCGCAATTTATTGTGCTTCATGTTGCAGTGCCCTCCATATGTACCCCA CAAGTAGTATGTCAGCAAGATAGAAGTTCTAAACCCGCCTCAATCAAACG TGTTTTTATTTGTACACTGATAATTGCAACATATTTCCTATGCCACACGT GGTTCGTTCCACCGTGCGTTTCCGCCATATCCGATGCTGGTATCGTTGCC CTCCAGAAAGAAGCGGCCAATTTCTTCGCGGACATGGTAGGGATGGGGGT GACTGTGCGTACGTGCAGGGACGCCTTCCCTCTGTGAGACCTCAGTGAGG TTCCAAAGAGCTATGACGCGTCACCAGTGTATTACCATTTCTTTACTGGT TTCCTCTTCGTTTGGCCATGTCCCCCTCCAGTGTGTCGTATTTGATATGT TTGTGTTGTGATTATAGGGTGTGTGACTCTTCGCTAGATATTTATCGCGT GCTGTTCATCAATCGTGAAACGAGGGGGTTCGGGTTCGAGCATAATTATT TTTAAGTCCGCCCCCCACCCCCCCTCTCTTCGCGTTAAGTTAATACGTCG TATGTTCACGCTGACAATTTCGTCTAGCGTGAAATAAGCGGCAAGAGCTC GCCGAGTTGATGTGCCGTGAGAACGAGATTGTTCTCTACGAGTGTAACTC GGCACGACGCCCAGCGTATCCGATGCAGGCACGTCTTGCTCATCGCTTTT CGGCTGTCGGAGTCTGTGAGCTTACACTACATCATTGATATAGTTTGACA TGAACAAATAATTGTGTTTTTTACCGCCTGGGAAGATAGCGCCACCTACC CATCGAAGCGGTTGTTGTTTGCTGTGTGACGACGGCAACGGTAGAACGGC GCCCTTTTGGTGGAATGTTGAGAGAAATGTGGGCTTTTTCGCTAGAGAAG AACGGAACAACCTTCTTACAGTTGTTGCACTAGCTCGATATTCGTGGCAC GAAATTTCACCGCTTTAAGAACAGTTAAGGCGGTCCGTCTGGTGGGTGCT CTTGGTGTGATTCGGTGGGTTTTTTGAGTGTAGACGGTAGAAGAAAGAAA TCGAAGGGGGGGTAGATTGCGTTTTGTCTTTTATTTGTGTCGGCGATGGA ACTACGCAGTCATGACTTCTTCACTCTACGAAGGTGGGAAAAGGCATAAG GATCGATCGATCGATCTGGATGGGATAGATGGATGGATCGATCATAGCTG CCTGTACACTCCCTCGCCAATCCGTTTGTGTGTGCGTCTTACTGTGTCTT GTGCTCTTTCCACATGTTTTCATGATGGCCCGATTTGCAGTCGATTCATG GAATCCGAGGGGGGGGGGGAGAGTATGGGCGGTTTTGTCAGTAGTCAACT TCGCACACATGCTGTGAAATTGTTGTTTGACATGTGTGGATACCACCAGC ACACTAAGTTGATGAGAGTCCTAGAGAAGTAGATGTAGGATGGGGTGGTC GATCAGGCTGGACAGCAGCACCTCGTTGCAGCATGGAAAATTGCGTCTTT TTGTTCTCCATAAAGGGGTCAGATGGGGAAATATGCCAAGCTTTATTGAC GCGAAGCATTTTCACTATACATCGAGGATAAAGGGCGCGCCCGCCCCGAT ACAGTATACCTGTTGAAGTTTTGACCAGTTTTGCGGTAGAATGCTGCGGA CGGTCTCATCATCGTTGGTTGTTGATTAAATCGTTTCACGCGGTCGTCCG CGGAGTTCGTCCGAGCAAGGGTTCAGGGACAATCGCACAGAGCGAAGCAG CGAAGCAGCGAAGGATGCATCCGGGTGCAAGGTGGATAGTTGCCGGGGCT GTAAGCCAGCTGGAGCGGTTTCCGTAGATCATTTTCTTGAATGCTCTGTT TTCATGATACTTGTTCCGGGTTGGCGGTGTCGTTGCGCGCGTATGGGCTA AAAAAATCTTTACCTGACTGCCCGGTTAGTAGACACCCGCGAGTCCGGTA TGTCGCGGGTCGTAAAACCTGCACGGTGTCGCTTGGTTGCGTTTCATTGT CCCCGTGTTCATTTCTACTTGTGTGCTCGTGAGATGTGATTCATGGTGTG CGTTTCTTCACTGACCGCTGTCTTCGCGTTCGGTGGGGAGGGGGAGAACT CGAATAGATTTGCTTATAAAAGGAAAGGGAAAGGGAAGGAAGATCCTGGT CGCCGAGGTCGTTCTTGTTTCTGCCAATCACGGGCAAAAATGCTGAAAAT AACGACCACTCGGCGTGATGAACTACGGTAAGTGGCGCTGGGGAAACGCT GCGTAGCTTTTGTTTATTTCGCTATCTATTATGGTGTGTGCCACAACAAG CGCCATGCTTGGAGCAATTTTTAGTTGTGACCACCCAGCTAACGCGGTGA TGTCCGTGCATGTGCTGTGTATTCGAGGTGGTGAGGATTTGTATATGTGC ATGTCCGTGAGCGGAGTGTGTGTTACGTGTATCGTGTTCATGTCGCCAAC CTTGCCTCAATGTGTGTGCCAGGAAACCGAGCAGTTGCGCTGAGAGTCGT GTGGGGTTATCTTTCGCGAGTCGAATCATAGTCCGGAGTATCCCCGTGTT TTTTTTCATGTGTGTAATTTTGTTTTATGTAATCAAATGACGGCTGCCTT TCTGCTCCTCCGCTCGCCTGCGGAAAGTTTCTGTGAGCGGGAACACATCC AAAAATACATTTCGGTATTCGGTTTGTTTGTTTCTCGCTTACAAATTGCA TTATTTCGCGCGTGATATAGTCACGCGTGAAGGTTATTTTTCATGTGAAG TGTTTGTGTTAAGCTCGGGAGATTACAAGTCAAGTAGGAGAAGTAGAAAC GCTACATCAAGTTTGGAAGTGTCGTAATGACTGCGTAGCGTGGGAGGATG TAAAACGTGCTATCATCGTGAATTTTACATTTTTTTGTATCTGTCGACGA AGTATCTTTGGGAACAATAATAATCCACTCTCATTAGGCGTCTTGGAGGC AGGGATTGTAGCCCACGGTACATGATGGTGCGGGGAGAAGCGGGGGGGGT GCGGAGGAGGCGATGGAAGAAATACAGGTTTGACGCCTAACCTGCTAAGC CTGTATGGTTGACATAATACATAATATCCTTGTAACATAATAGGCCAAGG TTATGGTCATTTCGGAACTATTTTCAAATACTCAACTCAAGTATCGTCGA AATATGGCATCCAAAATAAGATTTTCCATCTTTCAA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig900:14915..28800+

>mRNA_H-paniculata_contig900.16856.1 ID=mRNA_H-paniculata_contig900.16856.1|Name=mRNA_H-paniculata_contig900.16856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at H-paniculata_contig900:14915..28800+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGAAGGACTTACTGGTGGATCTGCAGTGGAACGCTCCCAAGATAC
TGGAGACAGCAAGGTCGTGTTCGGCGGCACGGCGCTCCTGATTGTGGACC
CTCAGATGGACTTCCATGAAGGCGGCTCTCTAGACGTGCCAGGCGCGACT
GCAGACGCGGAGCGCATTGCGCAGTTGGTAGCTGATCATAGCGAGAAAAT
CGATGAGATATTTGTTACGCTTGACTCCCACCATATGGAAGAAGGACTTA
CTGGTGGATCTGCAGTGGAACGCTCCCAAGATACTGGAGACAGCAAGGTC
GTGTTCGGCGGCACGGCGCTCCTGATTGTGGACCCTCAGATGGACTTCCA
TGAAGGCGGCTCTCTAGACGTGCCAGGCGCGACTGCAGACGCGGAGCGCA
TTGCGCAGTTGGTAGCTGATCATAGCGAGAAAATCGATGAGATATTTGTT
ACGCTTGACTCCCACCATTGCTTGGATATTGCGCACCCACATTTTTGGAC
GGACAAGAGCGGATCTCACCCTACACCGTTTACTAAGATCACAGCAAAAG
ATGTCGCCGTTGGGAGGTGGACCCCAGTTCAGCAGGAGCACCGGTGCTTG
GATATTGCGCACCCACATTTTTGGACGGACAAGAGCGGATCTCACCCTAC
ACCGTTTACTAAGATCACAGCAAAAGATGTCGCCGTTGGGAGGTGGACCC
CAGTTCAGCAGGAGCACCGGGACCATTGCATCGAGTACACCAAGAAACTG
GAGGCGGGACGGAAGTTCACCCTGTGCGTGTGGCCAGAGCACTGTTTGGA
CCATTGCATCGAGTACACCAAGAAACTGGAGGCGGGACGGAAGTTCACCC
TGTGCGTGTGGCCAGAGCACTGTTTGATTGGCACAACGGGCCACGCGGTA
CACCCTCAGATCAACGAAGATTGGCACAACGGGCCACGCGGTACACCCTC
AGATCAACGAAGCTATTCAAGATTGGGCGGTCGCGCAAAAGAAGACCGTG
ACGTACGTGATGAAGGGACAGTATACCCTCTCCGAGCAGTACAGCTATTC
AAGATTGGGCGGTCGCGCAAAAGAAGACCGTGACGTACGTGATGAAGGGA
CAGTATACCCTCTCCGAGCAGTACAGCTGCTTCAAGGCTGAAGTATCAGT
CGTGGGAGATGACTCCAACGAACGTGGTAAAGCTTTGCTGGATCAGATGT
GTCAGCTAGACTCGATCTTGCTGTGTGGCCAGGCGTCTTCCCACTGCGTG
AATTATTCCGCCCGTGACCTCGCGGCCGCGTGGAAACACAGTGCAGCCAG
TTCAGACGAGAATGGAGTGAGAAAGCGCATGCAAAGCTTGGTATTACTGC
GGGATGGAACTTCACCAGTACCAGGTTTCGAGCTGCTTCAAGGCTGAAGT
ATCAGTCGTGGGAGATGACTCCAACGAACGTGGTAAAGCTTTGCTGGATC
AGATGTGTCAGCTAGACTCGATCTTGCTGTGTGGCCAGGCGTCTTCCCAC
TGCGTGAATTATTCCGCCCGTGACCTCGCGGCCGCGTGGAAACACAGTGC
AGCCAGTTCAGACGAGAATGGAGTGAGAAAGCGCATGCAAAGCTTGGTAT
TACTGCGGGATGGAACTTCACCAGTACCAGGTTTCGAGAAAGAAGCGGCC
AATTTCTTCGCGGACATGGTAGGGATGGGGGTGACTGTGCGTACGTGCAG
GGACGCCTTCCCTCTGTGAAAAGAAGCGGCCAATTTCTTCGCGGACATGG
TAGGGATGGGGGTGACTGTGCGTACGTGCAGGGACGCCTTCCCTCTGTGA
back to top