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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 800 |
| Cds size | 579 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig90.16853.1 >prot_H-paniculata_contig90.16853.1 ID=prot_H-paniculata_contig90.16853.1|Name=mRNA_H-paniculata_contig90.16853.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MNDHSTDSAAFLHGTERSGSAASAAAARGFDPGLRAAAVAGEHGGSIAER
VARGMYGTQGVGGLQSLQQQQQQQQQQQYRRQQHLSVGPEGRGLSSLQAV
REAVEVAKAAAAAGDGVGKTGREGATGTMVDVDEPTGGAGRSGPVAIEAV
PSGGGSSAEQPVVSPAPEKMSQLLIEKKDYLQSLLDKNKSVG* back to topmRNA from alignment at H-paniculata_contig90:32425..39601+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig90.16853.1 ID=mRNA_H-paniculata_contig90.16853.1|Name=mRNA_H-paniculata_contig90.16853.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7177bp|location=Sequence derived from alignment at H-paniculata_contig90:32425..39601+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGATGAACGACCACAGCACCGACAGCGCCGCGTTTTTGCATGGGACAGAG
CGGTCGGGATCAGCAGCATCAGCAGCAGCAGCACGAGGGTTTGACCCCGG
GCTCAGGGCGGCGGCAGTGGCGGGCGAGCATGGTGGTTCGATTGCCGAGC
GTGTAGCGCGAGGTATGTACGGAACGCAGGGTGTTGGCGGCTTGCAGAGC
TTGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGTATCGACGGCAGCA
GCACTTGAGCGTCGGTCCCGAAGGACGAGGGTTGTCCTCCCTCCAGGCTG
TGAGGGAAGCGGTTGAGGTGGCGAAGGCGGCGGCAGCGGCGGGGGATGGC
GTAGGAAAAACGGGCAGAGAGGGAGCAACAGGAACGATGGTGGATGTGGA
TGTGAGTGGGGGTGTAGGAGGAGGCGGAGGAGGAGGAGAGAGTGTGCAAT
TTGATGGAGGCGTGGTTAAGGAGGTCGGATTTTCGCAGCAGCAGGTGGCT
GCCCCGTTTTACGGAGGATCGAACATGGTGAACGTGAGTGTTTTTTTCTG
CTGGTGTTGACGTAGTGTTGTGCTTCCCCCCCCCCCCTGCCCTTGGAAAA
TAGTGGCCCATGTGGAGTCAGAGTCAACGTGTTCAAAGAGGTGAAGAAGT
CGTGTGATCAAAGGGCTACGACACCGTTGGGGTAAAAACTGTTTGTAGCT
ATGGTACATAGTCCTTGAAGATATTTGGGGCGCAAGCTGCGTTTACTCCA
GCGCGCAAATAATTGATGATGTGCGTGTATGTGTGTATGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTGTGTCGCCTATACG
TCAGGGAGGGAGATGCGCGGATTGTACAAAACGGAAAAAAAATCATGTTC
CAAGATTTTGTACATAGCGAACGATCATCCAGATCTAGCGCTAGCCTAGT
GCGCATGCGGCGCCACTGCACGCACAAACAATCACATTCAAGTATCGCTA
TAGGCTGTTTCAGAGAAGAACTTCTAAGGACCTTTTACACGGAATGTCAC
TTCGGTTTTTGTGAGTTTTCGCACAAACTTTTGCACACGTATTCCCGACA
CTCGTCCACACTCTGCTAAAGTAAGTATTTTTTTTTTGCATTACTGTTAC
GGATTACTGGTTTTCGGGGGAGTCTTCAGTGTCGGAATAATTTCCAGAAC
CCCCGAAAACCGGTAATCCGTAACAGTAATGCAAAAAAATATTTACTTTA
GCAGAATGCGGACGAGTGTCAGGAATACATGTGCAAACTTTTGCGCGAAA
ACTTACAAACACCCGAAATAGGAACGGCTAAAATGTGAATGCAGTCAAAG
TCGGACAATATTCCCGCTTCTGGAACATCAATTTAACTTCGTCCACAAAC
AAAAATTTGTGTTTCACATGGAGCGCTTACTATAAACGATTTATATATAT
ATTATGTACGAATACTCACTTTTGTTGCAATGCAGCAAAGACCACTGTTC
CGCTCGGATTGTAGACGTCATCGTTCGTATGTGATGCGGGCGCGCGCGAT
CGACAAGAAAACAATCTGCTTCGTTTGGTAGCACGTCATGTTTATTGGGC
AGCCAAAATTTTATCATGTCACGCACGAAGTGTACAGAAGATAAGGCTAT
GAAACTCATCGGAAATTATTACACTCACATCGAATTTACAGGAAAACGAC
GACCACCTCATCATCGAGCTATGGAATTCCGGCAACTTGACAAATAATTA
CAAAGCCCCTATACTTACAAGACCAAACGCACAGTGTACCAACGACTGAA
GAAGTGATAACCAAATCCACGCCTAATCTAGTCGATATGGTTCAAGATGC
TGACTTTCCATGTCAAGGATGTTGCGATGTGCCTTGCAAGCCTTCCGCAT
CTTCTCGATAAGCGTAAAACCGTCCGCTCCTCCGTGCTCCCGGCGTAGCC
GCTCTAGATCGCCGCCAGCGTTATCACGCTTAGTGTACATACACCCTGTG
GTGCGACGAGCGTATTTACGAATTCTCTCCAGCGTCAGAATGCTTCTGGT
TTCGAAAGCCTTGAACATACTGGCTCGCTAATTCTTGGGATTCTCTTCGT
TGATTCTCCGCCGCAATTGTAGCTTAGACTTGCCCCTCGGCACGTGACAT
GAGCCACGAGTATCTACCGAGGTATATGCAAGTGCCGACCACTAATGTGT
GTAGACCACACAAGAGGTGTTTTGTCTAGATCACCACCGCGGTGTGTGCG
TACCATGTTAGTATGAGCGGTCAGCAGCATCGCGACAGCAAATTCGAAAC
ATGCGGCGTAATTACAATAAATTCCGATCCCCGGAGACCCGTTTTTGTGA
AAGCCTCCATACAAATAAACTGTTTGTAAACGTTTTCGCTGGTTCGTACC
TTACGGCTCGTTCCCGAACATTAGTGCCTTTGCACCTCACATCGACCCAC
GCCGATGTGTTCTCTGGATCGTATGGAGCACTCAGATACCTTCGTCATCA
AAATCGGTTGGTTGCAAGTGAAGAAAAGTATGGTTAAAGTGTTTTGCATC
TTATTTCCTCGACCAGCCTGTAGCGGTTTGTGTGAACCCAAGACTCAGGA
CTACCCGCCTGCGACTTTGCAGCGATCCATGTTAGTGCGGTGGGGACCAA
CGCAGCTTGCGATGTTTTCGGTTGGCCGCCTGTTATGTTCGTTCCAGGAG
TCGCCTCACGCTTCGGTGAGAGTGTTCGCTCTTAATCTGTGAACGGCGAA
CATGACTTGGGACAAAACGATGGCGCACGTGAGCCTTATCTCTAATAGAG
AATCGAACACAAGGAAAAAGATTCTCACGCATTACCCTCTATCAGTGACT
TGTTGTGTTCAGAGAATGGAATCGTGGAATATATGCCATGGGCACATGGC
TACATTCCAGGTTGCCTATAAAGATCCCACGTGGATTCGGGCTCCAGCTG
ATGTGGCCGGAGGCCTCAGTTCCTACCCTATAATTTATGTAAAGCAGCGA
GTAAGCGCGAGGATCCCTCGGGAATCTGGGCTCCACTGAACACTTGGAGG
TATGCTGGATACTTGACTTGTCCATAGCTAGACCGCTCGTGATATGTTTT
ATGCGCTTTAATATGGGGAGGGAAAATCGTGCTGTAATACGAAAGTCACG
GTAATTCTAATCCCACTGAAAAGAAGAGAACAAATGTTCACAAGAGTCAG
ATCTAAGGCTCATATATTTTTTCCCTAGGCATTAAGCTCACATTATGGTC
CATATTAATTCCTATGTAATGAGTACTATTATAGTCTTTATTCTCCCGCA
AAAAAAAGGGTTGGGCCGCCTCACCCGAACTAAGGGTGTTTTTATTTCTC
ACCATCGGGCCTCTGCTGTAAGCAAGTGATAGCATATGGTGCTAAATATT
GAACAAGTACAAGTAGAATTACAGTTTTCATGTTAACATTTGCTTGTCAA
GTACAAGCGTACAAGAAAGAGATGTAAAAAAACCAAAAAGATATTTCGAA
AAATTCTATACATATAATGTCCTTCAATCAGAATTGCGTACAAGTAAGTA
TACATGGTTGTAAATATATTTCCTCTCTCCCGTGAGTAAAATAAGTTGTT
ATGATGATGGCACTTGAACATCTCACATTTTATTTTTGATTTTTCAAAGT
TAGAATTTTACACTTTCTGAGGGTTGCATCCCAGAATTTCGCGGAAATTG
GCGGATGTCCACTGGGTGCCCATGCGGTGCAAAACAAAATCGACCGAAAA
GGAGCCATTTTTTGCCCCTCTTTTCGTCCTTTCCCAACGAACAACGGCGG
AAAGCGGAAACTCTCCCCGTGCAAAATGATCGTAACTAGTCCAACCTTGA
GCGGCCATTACTCCTGGTGCACAAATTGATGCCCCCTCCCCACGTTATCA
CCTCTCTATTGCCTGCCTAAGGGGGTGATGACACTCCAACTCGTAAAGGC
ATGCTTATTTACCGGGGATACCCCCAAATATCCCCCTCCCCTCTCCTTCC
AATACCATTCTCGGTGATAACTTTTCGGTGCCAAAATGTCATCACCGGGG
GGGGGGGGGGAAGGGTGTTACACCCTGTCAACTACGATATGGTGGATCTT
CAACGACGGGTCTAATAATCAGGGGAAGATGATAAGGGGATAAACAAAAT
TTCTTGAGGCTTGTCCACCCCTTGCTTTCTCCATGTACCAGGGGCGCACA
ATGTCGGCACATTTTTTTGGATCCTGCAAATGTCAACACAACATTGCGTC
GTTTTCGGTACAAACACGATGCTCTCTCGCTTGTTGATGCTGCCACCCAC
ACTCACTACATTACACATGTTCACGTTTTGGTCAAACAACACTAGAGTGC
GGTCGGTACATGTCCATATACCGTAACACCCTTTGATACCATATCCCCTC
ATATTATTTGGAAATTTAAGTTTTTCGACAATGACGATGCTCATGAAACC
GATAATACTATCATGAGAAAGTTCTCGTTGAGATATTTTGATAGACCCTG
CGGAGTCGGTAGGGCAGGCTCTTTGCTTCTCGAGAAAATTCCGTTTGGAA
AATAATATCAGGGGATGCGACATCGAAGAGTGTTACGATATGCTTCCCCT
GCGAAGCTAGCATAGGCAGGGTGTTATACAACCTCTTCCCATGGCGTTAA
CACGGGCGTTTTGTTATAAAACCTCTGAGGCGTACTATTTTCATTTTTTT
TCAAATTGGCCCCTCACCGGGGAGAGTTGTTGTACAGAGCCCCCCTTGCT
ATAGATACACCGTCACCTTCAGTACTCGAAAGCGTTACCTTCCGGTCCAC
ATCTCACCAATCAATGCCTTGGATTCAAAAACGAACGACAGGTTGTGAAC
GCTGACGCCATGTACTTTAACGCAGTCTAGGACAATTTTGGCATGGTTTC
GGCAATCGTTTTATGGCGAAAAAAAAAGAAACAAACCTCACTTTCAAGAT
TTGTCTGTAAAAGAGCAACATGCTTATTCGTATTACACGTACACAGCTCT
GTGGTGTCGCTGCATGTACCCAAGGCCCTACTTAATGCCTGTTCCTTGTA
CTCGTGTTGCAACACCCTCTCATTGTCTCTTCTTTTTTTCCGAACAAGTG
GGGATGAAAAATGATGATGACCCTCATGTCACGTTATGTCACGTCACGTC
CCTCTTCTTTTTTTACGCTGATCTCGTGTGCAGGACGAAAAAAAACAGCT
GTACAGTAGTCAAACCTTATCTTGAACTATCGAGGAGTATAGCTGTATCA
CTCACTAAATATGGTGTGTGTACCGGGAGTACACATAGATAAAGCTTGGC
ATCGCAAACACAGGCACATGATACACCCCGACGCAGACCCCAGTGAGAAT
CTTGATGCCTGTGATGAGCTCTCAATGCCAAATACATGATAGTTTACAAC
ATGCGTGCATTTTATATTGGCATTGATTAAAGGCCTATACAGACAGCACG
GGCCCAATGATGAGAAAATCTTACTTCGGGTGTGGCTCAAACCCTCATCT
TAGCAAGGATTATGAGCTGTACTGTTTTTACTTCTATACAAGAATTAGGT
TTTGGGCAACGATTTGTGCTCCATTTCTTGCGTCGGCATTCCCATGCACT
GGCCATTTATATGCCCATCAGCACATTGCAGACCCCCGAAGGGGCTGACA
CACACCGTACATCATACCGGAGATGGCTTCCAGCATTGGTTATCTTCGAC
CGTTGTAGCTCAGGCTGACCCCGAAGTGGGTCAATATTTGGCCTCGTTAT
GTATGAGTAGGAGAACACGCGAAGCCTCGTCGCCGTCGTGTATGCTCGTT
CAGCGATGTACTTCGAATTGGCTGATTTGTGTACCTGCTTGGTGCAGATC
CAGGATAAGGAAGGGTCTTATAAATGAATGAGAAAGGGAGTATGTTCGTC
GATCAAAAAGACACGATGATTATGATTTTCAAAGGTAAGAAGACCAGGCG
CAGACTCTGGAAACAGCGAGAAAAAATGTACCGTGCTTTGGGATTCGTTG
CTTGTATTGAACTTTGGAGGGGGGGGGGCAGGGGCAGGGACAGCTCCTGG
TCCGAGTATTGTAAGTGTGCGTAAGTCCTACGACTAGAGATGAAAATGCA
TAATGTGTGTTATAAAAGCCATTATTTTTTGTTTCCTCTGGCGCTTGGTC
CCTGTATGTCCTCCCACCTTACCCCCCAGTTGGTTGTAGAAATTCGCTGA
TAATAGATGTACGTCTGCATTTGCCGGCTTACATTTGACCTCAGAATGGG
ATGTAGTGTATATTATGTACTGAAATTACTGCAGATTGTGACACCCCCCC
TCCCCGTAAAAGCGGGGTTGACCTATTGAGGCGAATGTTCCGCCAGTTGG
ACGTGTTCGTATTTTGTGTCAAGCGTTCGATCATTGCGACATGATACTTG
CTGCATCATGCTTACTACATGGCGCTACGTTTTATGTGTGCATGTCACCC
ATGTCAACGAAATAACACGCTTGTATCCTGGTGGAAGCAGTAAGTAGTAC
ACTCCTCCACTGCTGGTTTCATACCAAGCGGTGCTGTAAGTACTTGTGAG
CCGTCGTGATTAGGGCTGTATGTAATAATGGTCCTTGGAGGTCATTCATG
TAGCACATTCAATGAAAGCCCTCCCTCGCCCCCTCCTCTCCGTTGCATAT
TTCGCCATGCCTCTGAGCTATTGATGCAGTCGTATGCGTGAAGACACTGG
CAAATACGTGTTCATTTCCACCCTGTAATTTTGCCCCATCCTGTCATAAT
TGTCCACCCCTTGATGTTGTGCCTGTAGGAACCAACCGGCGGAGCGGGGA
GGTCCGGTCCGGTGGCAATCGAGGCAGTTCCCAGTGGAGGCGGTTCTTCG
GCGGAGCAACCAGTAGTCAGCCCGGCGCCCGAGAAAATGTCACAGCTGTT
AATCGAAAAGAAAGATTACTTGCAAAGCCTTTTGGACAAAAATAAATCAG
TGGGATAGCAGCACGGGAATATATAGGGCGGCTTTGGGTAAAGAGTGGCT
CTGCGTTCTTCTGTTAATCAAAAAGTGCGCGGGTATTGCAGTGATACAAG
TGCGCATAGCACGGTTTTGTTTTACAACTCGTATTGTTGCGATTAACGCG
GCCCTCGGATAAGGTTACTCTTGGGCGGCACTGGTTTGGCTGTACATGCG
GTACATTTTGGTGGATGCAGATTGGGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig90:32425..39601+ >mRNA_H-paniculata_contig90.16853.1 ID=mRNA_H-paniculata_contig90.16853.1|Name=mRNA_H-paniculata_contig90.16853.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1158bp|location=Sequence derived from alignment at H-paniculata_contig90:32425..39601+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACGACCACAGCACCGACAGCGCCGCGTTTTTGCATGGGACAGAGCG
GTCGGGATCAGCAGCATCAGCAGCAGCAGCACGAGGGTTTGACCCCGGGC
TCAGGGCGGCGGCAGTGGCGGGCGAGCATGGTGGTTCGATTGCCGAGCGT
GTAGCGCGAGGTATGTACGGAACGCAGGGTGTTGGCGGCTTGCAGAGCTT
GCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGTATCGACGGCAGCAGC
ACTTGAGCGTCGGTCCCGAAGGACGAGGGTTGTCCTCCCTCCAGGCTGTG
AGGGAAGCGGTTGAGGTGGCGAAGGCGGCGGCAGCGGCGGGGGATGGCGT
AGGAAAAACGGGCAGAGAGGGAGCAACAGGAACGATGGTGGATGTGGATA
TGAACGACCACAGCACCGACAGCGCCGCGTTTTTGCATGGGACAGAGCGG
TCGGGATCAGCAGCATCAGCAGCAGCAGCACGAGGGTTTGACCCCGGGCT
CAGGGCGGCGGCAGTGGCGGGCGAGCATGGTGGTTCGATTGCCGAGCGTG
TAGCGCGAGGTATGTACGGAACGCAGGGTGTTGGCGGCTTGCAGAGCTTG
CAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGTATCGACGGCAGCAGCA
CTTGAGCGTCGGTCCCGAAGGACGAGGGTTGTCCTCCCTCCAGGCTGTGA
GGGAAGCGGTTGAGGTGGCGAAGGCGGCGGCAGCGGCGGGGGATGGCGTA
GGAAAAACGGGCAGAGAGGGAGCAACAGGAACGATGGTGGATGTGGATGA
ACCAACCGGCGGAGCGGGGAGGTCCGGTCCGGTGGCAATCGAGGCAGTTC
CCAGTGGAGGCGGTTCTTCGGCGGAGCAACCAGTAGTCAGCCCGGCGCCC
GAGAAAATGTCACAGCTGTTAATCGAAAAGAAAGATTACTTGCAAAGCCT
TTTGGACAAAAATAAATCAGTGGGATAGGAACCAACCGGCGGAGCGGGGA
GGTCCGGTCCGGTGGCAATCGAGGCAGTTCCCAGTGGAGGCGGTTCTTCG
GCGGAGCAACCAGTAGTCAGCCCGGCGCCCGAGAAAATGTCACAGCTGTT
AATCGAAAAGAAAGATTACTTGCAAAGCCTTTTGGACAAAAATAAATCAG
TGGGATAG back to top
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