mRNA_H-paniculata_contig8989.16839.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Match: D7FU09_ECTSI (Photolyase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU09_ECTSI) HSP 1 Score: 256 bits (654), Expect = 3.090e-81 Identity = 132/178 (74.16%), Postives = 140/178 (78.65%), Query Frame = 1
Query: 1 GRILTAEEFQSEASTKFEGLSVEAATRVGRLGPYSAPPNVALTALGTGLFAFLQGRIAETCRNIYPVNPGIVDEGLSENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGVREKEKRGANLTTHYRKLSHPPTKKGGPVLVTQGVKDPLNDAEGRAKLFQSLGPQVDVVRLDGGH 534
GRIL EEFQ+EA+ K+ GLSVE ATR GRLG YSAPPN AL LGTGLFAFLQGRIAETCRN+YPVNPGIVDEGL+ENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFG GPVLVTQGVKDPLNDA+GRA LF++LGPQV VVRLDGGH
Sbjct: 255 GRILDDEEFQTEATVKYGGLSVEEATRGGRLGAYSAPPNAALAVLGTGLFAFLQGRIAETCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFG--------------------------GPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGH 406
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Match: A0A6H5LA65_9PHAE (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA65_9PHAE) HSP 1 Score: 249 bits (637), Expect = 5.240e-76 Identity = 130/178 (73.03%), Postives = 137/178 (76.97%), Query Frame = 1
Query: 1 GRILTAEEFQSEASTKFEGLSVEAATRVGRLGPYSAPPNVALTALGTGLFAFLQGRIAETCRNIYPVNPGIVDEGLSENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGVREKEKRGANLTTHYRKLSHPPTKKGGPVLVTQGVKDPLNDAEGRAKLFQSLGPQVDVVRLDGGH 534
GRIL EEFQ+EA+ K+ GLSVE ATR GRL YSAPPN AL LG GLFAFLQGRIAETCRN+YPVNPGIVDEGL+ENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFG GPVLVTQGVKDPLNDA GRA LF++LGPQV VVRLDGGH
Sbjct: 522 GRILDDEEFQTEATVKYGGLSVEEATRRGRLEAYSAPPNAALAVLGAGLFAFLQGRIAETCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFG--------------------------GPVLVTQGVKDPLNDAGGRATLFEALGPQVSVVRLDGGH 673
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Match: A0A7S2UUB3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUB3_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.200e-48 Identity = 89/178 (50.00%), Postives = 110/178 (61.80%), Query Frame = 1
Query: 1 GRILTAEEFQSEASTKFEGLSVEAATRVGRLGPYSAPPNVALTALGTGLFAFLQGRIAETCRNIYPVNPGIVDEGLSENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGVREKEKRGANLTTHYRKLSHPPTKKGGPVLVTQGVKDPLNDAEGRAKLFQSLGPQVDVVRLDGGH 534
G+ILT E+++ E + G ++E TRVG LGPY APPN L A G +F+FLQGRI +TC N+YP NP V GL+E+ILRDSCDPGA+GVIAAGGKLP R ANE+L KFG GPVLVTQG+ DPLNDA+GR L + P ++ + GH
Sbjct: 168 GKILTPEQYEEELEMQ-GGRTIEEKTRVGDLGPYRAPPNFVLQAFGFLIFSFLQGRIEKTCMNLYPTNPDPVKNGLAESILRDSCDPGAIGVIAAGGKLPTPRPANELLQKFG--------------------------GPVLVTQGILDPLNDAKGRLDLLKKCYPNLEACSIQAGH 318
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Match: A0A836C8C6_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C6_9STRA) HSP 1 Score: 166 bits (421), Expect = 5.710e-48 Identity = 90/178 (50.56%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 1 GRILTAEEFQSEASTKFEGLSVEAATRVGRLGPYSAPPNVALTALGTGLFAFLQGRIAETCRNIYPVNPGIVDEGLSENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGVREKEKRGANLTTHYRKLSHPPTKKGGPVLVTQGVKDPLNDAEGRAKLFQSLGPQVDVVRLDGGH 534
GR+LT + +E KF G++VE AT +L PYSAPPN L+A+ T +FA LQGRI +TC+++YPV P VD GL++NILRDS DPGA+G+ AG KLP+SRSANEML KFG GPVLV QG+ DPLNDA+ R K FQ V+VV + GGH
Sbjct: 98 GRLLTPADLIAEKK-KFGGVTVEEATLTQKLAPYSAPPNAVLSAISTVIFAGLQGRIRQTCKSLYPVRPERVDGGLADNILRDSKDPGALGIFNAGAKLPYSRSANEMLAKFG--------------------------GPVLVAQGLLDPLNDAKARVKQFQEAYEAVEVVPIQGGH 248
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Match: A0A7S4D635_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D635_HETAK) HSP 1 Score: 156 bits (395), Expect = 1.010e-42 Identity = 82/161 (50.93%), Postives = 97/161 (60.25%), Query Frame = 1
Query: 52 EGLSVEAATRVGRLGPYSAPPNVALTALGTGLFAFLQGRIAETCRNIYPVNPGIVDEGLSENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGVREKEKRGANLTTHYRKLSHPPTKKGGPVLVTQGVKDPLNDAEGRAKLFQSLGPQVDVVRLDGGH 534
+G +V A T+ GRLGPY APPN+ L GLF FLQGRI +TC N+YP NP +V +GL+ I RDSCDPGA GVIAAGGKLP R NE+ +FG GPVL QGV DPLNDA GRA ++LG +V VR+D GH
Sbjct: 2 QGGTVLARTQEGRLGPYRAPPNLVLGGFAAGLFYFLQGRIEKTCENLYPTNPSVVKQGLARAIFRDSCDPGATGVIAAGGKLPAPRPLNELFAEFG--------------------------GPVLAVQGVLDPLNDARGRADALEALGAKV--VRIDAGH 134
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Match: I2CPL0_NANGC (Alpha beta hydrolase fold protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPL0_NANGC) HSP 1 Score: 143 bits (361), Expect = 6.960e-39 Identity = 75/178 (42.13%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 1 GRILTAEEFQSEASTKFEGLSVEAATRVGRLGPYSAPPNVALTALGTGLFAFLQGRIAETCRNIYPVNPGIVDEGLSENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGVREKEKRGANLTTHYRKLSHPPTKKGGPVLVTQGVKDPLNDAEGRAKLFQSLGPQVDVVRLDGGH 534
G++ + E + +E +++ G +VE TR L P+S PP LTA GLF +LQ R+ + C+++Y +P V L NI+RDSCDPGA+GV A+GG+LP RS NE++ KFG GPVLV QG+ DPLNDA+GRA L Q+ V+VV ++GGH
Sbjct: 128 GKVTSPEAYAAELASR-AGRTVEETTRSASLPPFSGPPKAVLTAFSAGLFWYLQPRVEQICKDLYRHSPQEVGPRLVNNIVRDSCDPGALGVFASGGRLPSPRSTNELMAKFG--------------------------GPVLVAQGILDPLNDAKGRAALLQAAWEDVEVVEIEGGH 278
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Match: A0A4D9CZF8_9STRA (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZF8_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.330e-36 Identity = 75/178 (42.13%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 1 GRILTAEEFQSEASTKFEGLSVEAATRVGRLGPYSAPPNVALTALGTGLFAFLQGRIAETCRNIYPVNPGIVDEGLSENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGVREKEKRGANLTTHYRKLSHPPTKKGGPVLVTQGVKDPLNDAEGRAKLFQSLGPQVDVVRLDGGH 534
G++ + E + +E +++ G +VE TR L P+S PP LTA GLF +LQ R+ + C+++Y +P V L NI+RDSCDPGA+GV A+GG+LP RS NE++ KFG GPVLV QG+ DPLNDA+GRA L Q+ V+VV ++GGH
Sbjct: 728 GKVTSPEAYAAELTSR-AGRTVEETTRSASLPPFSGPPKAVLTAFSAGLFWYLQPRVEQICKDLYRHSPQEVGPRLVNNIVRDSCDPGALGVFASGGRLPSPRSTNELMAKFG--------------------------GPVLVAQGILDPLNDAKGRAALLQAAWEDVEVVEIEGGH 878
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Match: A0A0G4GX81_VITBC (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GX81_VITBC) HSP 1 Score: 119 bits (298), Expect = 6.570e-28 Identity = 69/180 (38.33%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 1 GRILTAEEFQSEASTKFEGLSVEAATR--VGRLGPYSAPPNVALTALGTGLFAFLQGRIAETCRNIYPVNPGIVDEGLSENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGVREKEKRGANLTTHYRKLSHPPTKKGGPVLVTQGVKDPLNDAEGRAKLFQSLGPQVDVVRLDGGH 534
GR+ T E+ + ++ G ++E ATR L PYSAPP L TGL+ +L+ + C+ +YP N V++G+ + ILRDS DPGA+GVIA+G KLP RS NE++ KFG PVL+ QG+ DPLN+A R + FQ LG ++ L GH
Sbjct: 562 GRVFTPAEYVNVTASL--GGTMEEATRGYAQPLPPYSAPPERLLQLFATGLYLYLKTQTPSICKRLYPTNGTAVEDGIIDCILRDSADPGAIGVIASGAKLPPQRSHNELIAKFGR--------------------------PVLILQGLLDPLNNATARMEAFQRLGDLIETAPLPAGH 713
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Match: A0A7S1GQH1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQH1_CYCTE) HSP 1 Score: 109 bits (272), Expect = 1.880e-26 Identity = 63/157 (40.13%), Postives = 82/157 (52.23%), Query Frame = 1
Query: 76 TRVGRLGPYSAPPNVALTALGTGLFAFLQGRIAETCRNIYPVNPGIVDEGLSENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGK-FGVR---EKEKRGANLTTHYRKLSHPPTKKGGPVLVTQGVKDPLNDAEGRAKLFQSLGPQVDVVRLDGGH 534
T L P P G GL +L+ +IA C +YP NP D+ L++ ILRDS DPGA+ V+ +G KLP R+ANE+L FG KE G + +R GPVLV QG+ DPLND+ RAKL L + V ++GGH
Sbjct: 28 TATDSLPPCDPLPRPLARLAGNGLLQYLRPQIASLCTKLYPTNPSNADKNLADTILRDSLDPGAIHVMISGSKLPSPRTANELLAADFGSSLSSSKENSGGESESVFR----------GPVLVAQGMLDPLNDSPSRAKLLGGLRSDITVTPINGGH 174
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Match: A0A7S1IML3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IML3_9EUGL) HSP 1 Score: 114 bits (285), Expect = 3.530e-26 Identity = 68/182 (37.36%), Postives = 91/182 (50.00%), Query Frame = 1
Query: 1 GRILTAEEFQSEASTKFEGLSVEAATRVGRLGPYSAPPNVALTALGTGLFAFLQGRIAETCRNIYPVNPGIVDEGLSENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGVREKEKRGANLTTHYRKLSHPPTKKGGPVLVTQGVKDPLNDAEGRAK--LFQSLGPQ--VDVVRLDGGH 534
GR++T EE++ E + + G +G Y PN L G LFA+LQ I C+N+YP NP VD+ L+ NI RDS DPGA+GV+ +G KLP R+ NE+ ++G GPVLVTQGV DPL R + L+ S+ P V V L+ GH
Sbjct: 528 GRMITQEEYERELAENGGTVKQRMMGEAGEIGMYKPLPNWLLATGGKALFAYLQPSIGSICKNVYPNNPDAVDDRLTSNIFRDSEDPGALGVMTSGAKLPPPRTKNELFEEYG--------------------------GPVLVTQGVNDPLGGGTARTRFALYNSVLPADIVTAVSLEAGH 683 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8989.16839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8989.16839.1 >prot_H-paniculata_contig8989.16839.1 ID=prot_H-paniculata_contig8989.16839.1|Name=mRNA_H-paniculata_contig8989.16839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp GRILTAEEFQSEASTKFEGLSVEAATRVGRLGPYSAPPNVALTALGTGLFback to top mRNA from alignment at H-paniculata_contig8989:6013..7854+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8989.16839.1 ID=mRNA_H-paniculata_contig8989.16839.1|Name=mRNA_H-paniculata_contig8989.16839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1842bp|location=Sequence derived from alignment at H-paniculata_contig8989:6013..7854+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8989:6013..7854+ >mRNA_H-paniculata_contig8989.16839.1 ID=mRNA_H-paniculata_contig8989.16839.1|Name=mRNA_H-paniculata_contig8989.16839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1080bp|location=Sequence derived from alignment at H-paniculata_contig8989:6013..7854+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |