mRNA_H-paniculata_contig8970.16826.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Match: A0A6H5L056_9PHAE (NUC194 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L056_9PHAE) HSP 1 Score: 926 bits (2393), Expect = 1.050e-306 Identity = 534/908 (58.81%), Postives = 629/908 (69.27%), Query Frame = 1
Query: 1 FMCFLKSRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGVLQRLVVLARHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQRGRPGDFSKLFRRVYPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQTDNDDTLALLDCLAEEAAAEEGGPLRELCARGVVEFLRYAIKQSSKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALVDRYALRLLHVAMVSLRRAHHDHSALGVADAASAAVDRSLRIIHHSVAELGDRADLLKPKNARGQLSSVQEMAQWAWDEVGAVETRFRRKCMAILLALCPLVVGT-PGLPPPPSE-EGTREWIWKCLKSARGDGVTEAVRVFEKTRTKATAAADPAVVGTLMRDSWGCVFALGGADEGREQASAERNRCELIATAADCYQFACETGVITPDELFLQSSS-------------LTSSGDCTSDQEGKSAGGGSSKKRKVGDNQDEQGMGSTPPRVLRSLAVVMERYGKFLRYFPFQSLV-----DGDD-----DGGMYRDKGKGKGE-ASRSAHDFAPKPLLDDPGALPPEREATRLARAVLIRRAFNLMAACLSGSDKPND-MAAVLVREGLWGEETQRLVVYSLAWPWAGGLLPRASDGDEVGKFLPAAAERLLSHWKILDRNVGEGSPRLYTILQDLLRLQNSNQ-----VAESSSMKITDSQDLCQWLLSSSLSSHEALSRPSLDRTSSTGMVNVAELKRLSDHRHP-PPDDELTGRVVRAYRAFARAGIFDTTASSGATDGTARSLAFVLWFTILSLPEGLRPASAQRASAALRLSIELGLPTIVAPRGEISTDSLLLGLLDVSPAAGGVQGGGEDRAGKVGGATKGALLYRRFPDIVHEVLLKAG 2625
F+ L RN L+A+DAS ALSDSLAWDT PRI L+VP++D+ +PLT+C+DGVLQRLV LA HEG RQTKTLAAECLHALVVYMVGCTATDPSSGQ+GRPGDFSKLFRRV+PAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQT+NDDTLALLDCL E AAAE+GGPLRE+CA+GVVEFLRYAIKQS+KRQQAEGP AVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETAL++RYALRLLHVA++SLRRAHHDHSALGVADAAS+AVDR+LR++H SV E GDR DLL+ ++ RG+L SV+EMA WAWD VGAVETRFRRKCMA+LLALCPLVV T GL PSE +GTR W+W+ L+ + G+TEAVRVFE + +++ A + AV G F G ++G E E + IATAADCY FA +TG+IT ELFL ++ G + PRV+RSLA V+ER+GKFL FPFQSL DGD G + G A+R A + + ++DDPG LP ER +L+RAVL+RR F L+A CLS D MAA LV+EGLW +V+YSL WPWAG LLPRASDGDEV +FLPAA ERLL HWK LD G G+ L LQ LLR++ S + A S S D+ DLCQW+L+ SLSS +ALSRP + S+ R + R P PPDDELTGRV+RAYR+FA AG+F + G G A LA LW T+L LPEGLRPAS RA ALRLS++LGLPT ++ S+L GLLD+ PA V A VGGAT+G+L YRRF + +H+ LL+ G
Sbjct: 624 FLGRLGGRNHLVATDASQALSDSLAWDTTPRILLKVPFKDRQNPLTICLDGVLQRLVELALHEGTRQTKTLAAECLHALVVYMVGCTATDPSSGQQGRPGDFSKLFRRVFPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQTENDDTLALLDCLGEGAAAEDGGPLREVCAKGVVEFLRYAIKQSTKRQQAEGPAAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALLNRYALRLLHVALISLRRAHHDHSALGVADAASSAVDRALRVVHESVTEKGDRGDLLRKRDERGELRSVEEMAGWAWDRVGAVETRFRRKCMAVLLALCPLVVETFDGLDETPSENDGTRTWVWRRLEESGRAGITEAVRVFESSASQSQAFSSAAVGGGG--------FKAIGCEQGAELRENETMEWDRIATAADCYNFARDTGIITAAELFLGAAKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGSEAAEPRVIRSLAGVVERFGKFLEDFPFQSLAGAEERDGDACVVQRGGARHPTVANVSGTVAARLAAEASGPLVVDDPGLLPTERATAQLSRAVLLRRGFTLLAGCLSDDGARRDEMAAFLVKEGLWSRRAHLVVIYSLVWPWAGELLPRASDGDEVEQFLPAAVERLLKHWKTLDNAAGPGNG-LSETLQSLLRVRVSKEDSARLSAASPSSGEDDAVDLCQWILAQSLSSQQALSRPFV----SSRAGRKPSTARSNARRSPTPPDDELTGRVIRAYRSFANAGLFGSVGDGGG-GGKAFRLASGLWSTVLRLPEGLRPASEHRAKTALRLSMDLGLPTTTGATTGVA--SILAGLLDLHPAKRAVA----SSAVGVGGATRGSLFYRRFSEPIHDALLRRG 1511
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Match: D8LKP7_ECTSI (Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP7_ECTSI) HSP 1 Score: 920 bits (2377), Expect = 2.360e-304 Identity = 533/912 (58.44%), Postives = 626/912 (68.64%), Query Frame = 1
Query: 1 FMCFLKSRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGVLQRLVVLARHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQRGRPGDFSKLFRRVYPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQTDNDDTLALLDCLAEEAAAEEGGPLRELCARGVVEFLRYAIKQSSKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALVDRYALRLLHVAMVSLRRAHHDHSALGVADAASAAVDRSLRIIHHSVAELGDRADLLKPKNARGQLSSVQEMAQWAWDEVGAVETRFRRKCMAILLALCPLVVGT-PGLPPPPSE-EGTREWIWKCLKSARGDGVTEAVRVFEKTRTKATAAADPAVVGTLMRDSWGCVFALGGADEGREQASAERNRCELIATAADCYQFACETGVITPDELFLQSSS-------------LTSSGDCTSDQEGKSAGGGSSKKRKVGDNQDEQGMGSTPPRVLRSLAVVMERYGKFLRYFPFQSLV---DGDDDGGMYRDKG-------KGKGEASRSAHDFAPKPLL-DDPGALPPEREATRLARAVLIRRAFNLMAACLSGSDKPND-MAAVLVREGLWGEETQRLVVYSLAWPWAGGLLPRASDGDEVGKFLPAAAERLLSHWKILDRNVGEGSPRLYTILQDLLRLQNSNQ-----VAESSSMKITDSQDLCQWLLSSSLSSHEALSRPSLD----RTSSTGMVNVAELKRLSDHRHP-PPDDELTGRVVRAYRAFARAGIFDTTASSGATDGTARSLAFVLWFTILSLPEGLRPASAQRASAALRLSIELGLPTIVAPRGEISTDSLLLGLLDVSPAAGGVQGGGEDRAGKVGGATKGALLYRRFPDIVHEVLLKAG 2625
F+ L RN L+A+DAS ALSDSLAWDT PRI L VP++D+ +PLT+C+DGVLQRLV LA HEGARQTKTLAAECLHALVVYMVGCTATDPSSGQ+GRPGDFSKLFRRV+PAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQT+NDDTLALLDCL E AAAEEGGPLRE+CA+GVVEFLRYAIKQS+KRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETAL++RYALRLLHVA++SLRRAHHDHSALGVADAAS+AVDR+LR++H S+ E GDR DLL+ ++ RG+L SV+EMA WAWD VGAVETRFRRKCM +LLALCPLVV T GL PSE +G R W+W+ L+ + G+TEAVRVFE + +++ A + AV G G A+GG ++G E E + IATAADCY FA +TG+IT ELFL + G + P V+RSLA V+ER+GKFL FPFQSL + D D G+ + G G + A +PL+ DDPG LP ER A +L+RAVL+RR F L+A CLS D MAA LV+EGLW +V+Y L WPWAG LPRASDGDEV +FLPAA ERLL HWK LD G G+ L LQ LLR++ S + A S S D+ DLCQW+L+ SLSS +ALSRP + R ST N R P PPDDELTGRV+RAYR+FA +G+F + G G A LA LW T++ LPEGLRPAS RA LRLS++LGLPT I S+L GLLD+ PA + A VGGAT+G+L YRRF + +H+ LL+ G
Sbjct: 965 FLGRLGGRNHLVATDASKALSDSLAWDTTPRILLNVPFKDRQNPLTICLDGVLQRLVELALHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQQGRPGDFSKLFRRVFPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQTENDDTLALLDCLGEGAAAEEGGPLREVCAKGVVEFLRYAIKQSTKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALLNRYALRLLHVALISLRRAHHDHSALGVADAASSAVDRALRVVHESITEKGDRGDLLRKRDERGELRSVEEMAGWAWDRVGAVETRFRRKCMTVLLALCPLVVETFDGLDETPSENDGARTWVWRRLEESGRAGITEAVRVFESSASQSQAFSSAAVGG-------GGFKAIGG-EQGAELRENETMEWDRIATAADCYNFARDTGIITAAELFLGAPKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGSEAAEPLVVRSLAGVVERFGKFLEDFPFQSLAGEEERDGDAGVVQGDGLRHPTVANVSGTVAARLAAEASRPLVVDDPGLLPTERAAAQLSRAVLLRRGFTLLAGCLSDDGARRDEMAAFLVKEGLWSRRAHLVVIYCLVWPWAGEFLPRASDGDEVEQFLPAAVERLLKHWKTLDNAAGPGNG-LSETLQSLLRVRVSKEDSARLSAASPSSGEDDAVDLCQWILAQSLSSQQALSRPFVSGRAGRKPSTARSNA--------RRSPTPPDDELTGRVIRAYRSFANSGLFGSVGGGG---GEAFRLASGLWSTVVRLPEGLRPASEHRAKTVLRLSMDLGLPTTTG--ATIGAASILAGLLDLHPA----KRAAAASAVGVGGATRGSLFYRRFSEPIHDALLRRG 1850
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Match: A0A670I656_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I656_PODMU) HSP 1 Score: 210 bits (534), Expect = 3.900e-52 Identity = 146/457 (31.95%), Postives = 226/457 (49.45%), Query Frame = 1
Query: 19 SRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGVLQRLVVLARHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQRGRPGDFSKLFRRVYPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQT-DNDDTLALLDCLAEEAAAEEGGPLRELCARGVVEFLRYAIKQSSKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALVDRYALRLLHVAMVSLRRAHHDHSALGVADAASAAVDRSLRIIHHSVAELGDRADLLKPKNARGQLSSVQEMAQWAWDEVGAVETRFRRKCMAILLALCPLVVGTPGLPPPPSEEGTREWIWKCLKSARGDGVTEAVRVFEKTRTKATAAADPAVVGTLMRDSWGCVFALGGADEGREQAS--AERNRCELIATAADCYQFACETGVITPDELFLQSSSLTSSG 1380
+RN + A+ + ++WDT R+ VP+ D M P+ + +D L R+ LA RQTK A E LH++VVYM+G A P GQ+ P F L++ +P +LRLA D+D+ TR L+ L M+L+ WF+ + ++ DT+ALL+ + E LR+ C + V EFL+++IKQS+ +QQ PV +L R++SLA HP+ +RLG +AFN + R REE+ALVD++ L V + SL H D +LG A AVD RII H + L P+ ++++ W + G +T R K M + L PL+ P + W+ L+ G++ ++ E G ++ + A + +E S A +++ + DCY E G+I P+E+ L SS LTS G
Sbjct: 794 NRNLVTAASTEENMKKFVSWDTEKRLSFAVPFAD-MKPV-IYLDLFLPRVTELALSASDRQTKVAACELLHSIVVYMLGKAAQIPE-GQQASPPMFH-LYKHTFPVLLRLACDVDQVTRQLYGTLVMELIHWFTNNKKFESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQSTPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQFVFEALVVYLESLALTHGDEKSLGTAQQCCDAVDHLKRIIKHKASSLNKENQRRIPRGFPQTSICLEDVVMWLLMQCGRPQTECRHKVMELFFELVPLL---------PDNKSPSSWLGDVLQK---QGISFLIKKIEG--------------GGCEGENISGILAHPTLHDLQETFSLRAVVQWMDMLLASLDCYNTFIEQGMIKPNEM-LGSSFLTSLG 1219
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Match: A0A670I613_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I613_PODMU) HSP 1 Score: 210 bits (534), Expect = 3.920e-52 Identity = 146/457 (31.95%), Postives = 226/457 (49.45%), Query Frame = 1
Query: 19 SRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGVLQRLVVLARHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQRGRPGDFSKLFRRVYPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQT-DNDDTLALLDCLAEEAAAEEGGPLRELCARGVVEFLRYAIKQSSKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALVDRYALRLLHVAMVSLRRAHHDHSALGVADAASAAVDRSLRIIHHSVAELGDRADLLKPKNARGQLSSVQEMAQWAWDEVGAVETRFRRKCMAILLALCPLVVGTPGLPPPPSEEGTREWIWKCLKSARGDGVTEAVRVFEKTRTKATAAADPAVVGTLMRDSWGCVFALGGADEGREQAS--AERNRCELIATAADCYQFACETGVITPDELFLQSSSLTSSG 1380
+RN + A+ + ++WDT R+ VP+ D M P+ + +D L R+ LA RQTK A E LH++VVYM+G A P GQ+ P F L++ +P +LRLA D+D+ TR L+ L M+L+ WF+ + ++ DT+ALL+ + E LR+ C + V EFL+++IKQS+ +QQ PV +L R++SLA HP+ +RLG +AFN + R REE+ALVD++ L V + SL H D +LG A AVD RII H + L P+ ++++ W + G +T R K M + L PL+ P + W+ L+ G++ ++ E G ++ + A + +E S A +++ + DCY E G+I P+E+ L SS LTS G
Sbjct: 835 NRNLVTAASTEENMKKFVSWDTEKRLSFAVPFAD-MKPV-IYLDLFLPRVTELALSASDRQTKVAACELLHSIVVYMLGKAAQIPE-GQQASPPMFH-LYKHTFPVLLRLACDVDQVTRQLYGTLVMELIHWFTNNKKFESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQSTPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQFVFEALVVYLESLALTHGDEKSLGTAQQCCDAVDHLKRIIKHKASSLNKENQRRIPRGFPQTSICLEDVVMWLLMQCGRPQTECRHKVMELFFELVPLL---------PDNKSPSSWLGDVLQK---QGISFLIKKIEG--------------GGCEGENISGILAHPTLHDLQETFSLRAVVQWMDMLLASLDCYNTFIEQGMIKPNEM-LGSSFLTSLG 1260
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Match: A0A670I625_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I625_PODMU) HSP 1 Score: 210 bits (534), Expect = 3.920e-52 Identity = 146/457 (31.95%), Postives = 226/457 (49.45%), Query Frame = 1
Query: 19 SRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGVLQRLVVLARHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQRGRPGDFSKLFRRVYPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQT-DNDDTLALLDCLAEEAAAEEGGPLRELCARGVVEFLRYAIKQSSKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALVDRYALRLLHVAMVSLRRAHHDHSALGVADAASAAVDRSLRIIHHSVAELGDRADLLKPKNARGQLSSVQEMAQWAWDEVGAVETRFRRKCMAILLALCPLVVGTPGLPPPPSEEGTREWIWKCLKSARGDGVTEAVRVFEKTRTKATAAADPAVVGTLMRDSWGCVFALGGADEGREQAS--AERNRCELIATAADCYQFACETGVITPDELFLQSSSLTSSG 1380
+RN + A+ + ++WDT R+ VP+ D M P+ + +D L R+ LA RQTK A E LH++VVYM+G A P GQ+ P F L++ +P +LRLA D+D+ TR L+ L M+L+ WF+ + ++ DT+ALL+ + E LR+ C + V EFL+++IKQS+ +QQ PV +L R++SLA HP+ +RLG +AFN + R REE+ALVD++ L V + SL H D +LG A AVD RII H + L P+ ++++ W + G +T R K M + L PL+ P + W+ L+ G++ ++ E G ++ + A + +E S A +++ + DCY E G+I P+E+ L SS LTS G
Sbjct: 835 NRNLVTAASTEENMKKFVSWDTEKRLSFAVPFAD-MKPV-IYLDLFLPRVTELALSASDRQTKVAACELLHSIVVYMLGKAAQIPE-GQQASPPMFH-LYKHTFPVLLRLACDVDQVTRQLYGTLVMELIHWFTNNKKFESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQSTPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQFVFEALVVYLESLALTHGDEKSLGTAQQCCDAVDHLKRIIKHKASSLNKENQRRIPRGFPQTSICLEDVVMWLLMQCGRPQTECRHKVMELFFELVPLL---------PDNKSPSSWLGDVLQK---QGISFLIKKIEG--------------GGCEGENISGILAHPTLHDLQETFSLRAVVQWMDMLLASLDCYNTFIEQGMIKPNEM-LGSSFLTSLG 1260
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Match: A0A670I696_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I696_PODMU) HSP 1 Score: 208 bits (530), Expect = 1.230e-51 Identity = 145/460 (31.52%), Postives = 226/460 (49.13%), Query Frame = 1
Query: 19 SRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGVLQRLVVLARHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQRGRPGDFSKLFRRVYPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQT-DNDDTLALLDCLAEEAAAEEGGPLRELCARGVVEFLRYAIKQSSKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALVDRYALRLLHVAMVSLRRAHHDHSALGVADAASAAVDRSLRIIHHSVAELGDRADLLKPKNARGQLSSVQEMAQWAWDEVGAVETRFRRKCMAILLALCPLVVGTPGLPPPPSEEGTREWIWKCLKSARGDGVTEAVRVFEKTRTKATAAADPAVVGTLMRDSWGCVFALGGADEGREQAS--AERNRCELIATAADCYQFACETGVITPDELF---LQSSSLTSSG 1380
+RN + A+ + ++WDT R+ VP+ D M P+ + +D L R+ LA RQTK A E LH++VVYM+G A P GQ+ P F L++ +P +LRLA D+D+ TR L+ L M+L+ WF+ + ++ DT+ALL+ + E LR+ C + V EFL+++IKQS+ +QQ PV +L R++SLA HP+ +RLG +AFN + R REE+ALVD++ L V + SL H D +LG A AVD RII H + L P+ ++++ W + G +T R K M + L PL+ P + W+ L+ G++ ++ E G ++ + A + +E S A +++ + DCY E G+I P+E+ + SS LTS G
Sbjct: 833 NRNLVTAASTEENMKKFVSWDTEKRLSFAVPFAD-MKPV-IYLDLFLPRVTELALSASDRQTKVAACELLHSIVVYMLGKAAQIPE-GQQASPPMFH-LYKHTFPVLLRLACDVDQVTRQLYGTLVMELIHWFTNNKKFESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQSTPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQFVFEALVVYLESLALTHGDEKSLGTAQQCCDAVDHLKRIIKHKASSLNKENQRRIPRGFPQTSICLEDVVMWLLMQCGRPQTECRHKVMELFFELVPLL---------PDNKSPSSWLGDVLQK---QGISFLIKKIEG--------------GGCEGENISGILAHPTLHDLQETFSLRAVVQWMDMLLASLDCYNTFIEQGMIKPNEMLATNIGSSFLTSLG 1262
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Match: A0A670I629_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I629_PODMU) HSP 1 Score: 208 bits (530), Expect = 1.230e-51 Identity = 145/460 (31.52%), Postives = 226/460 (49.13%), Query Frame = 1
Query: 19 SRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGVLQRLVVLARHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQRGRPGDFSKLFRRVYPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQT-DNDDTLALLDCLAEEAAAEEGGPLRELCARGVVEFLRYAIKQSSKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALVDRYALRLLHVAMVSLRRAHHDHSALGVADAASAAVDRSLRIIHHSVAELGDRADLLKPKNARGQLSSVQEMAQWAWDEVGAVETRFRRKCMAILLALCPLVVGTPGLPPPPSEEGTREWIWKCLKSARGDGVTEAVRVFEKTRTKATAAADPAVVGTLMRDSWGCVFALGGADEGREQAS--AERNRCELIATAADCYQFACETGVITPDELF---LQSSSLTSSG 1380
+RN + A+ + ++WDT R+ VP+ D M P+ + +D L R+ LA RQTK A E LH++VVYM+G A P GQ+ P F L++ +P +LRLA D+D+ TR L+ L M+L+ WF+ + ++ DT+ALL+ + E LR+ C + V EFL+++IKQS+ +QQ PV +L R++SLA HP+ +RLG +AFN + R REE+ALVD++ L V + SL H D +LG A AVD RII H + L P+ ++++ W + G +T R K M + L PL+ P + W+ L+ G++ ++ E G ++ + A + +E S A +++ + DCY E G+I P+E+ + SS LTS G
Sbjct: 822 NRNLVTAASTEENMKKFVSWDTEKRLSFAVPFAD-MKPV-IYLDLFLPRVTELALSASDRQTKVAACELLHSIVVYMLGKAAQIPE-GQQASPPMFH-LYKHTFPVLLRLACDVDQVTRQLYGTLVMELIHWFTNNKKFESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQSTPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQFVFEALVVYLESLALTHGDEKSLGTAQQCCDAVDHLKRIIKHKASSLNKENQRRIPRGFPQTSICLEDVVMWLLMQCGRPQTECRHKVMELFFELVPLL---------PDNKSPSSWLGDVLQK---QGISFLIKKIEG--------------GGCEGENISGILAHPTLHDLQETFSLRAVVQWMDMLLASLDCYNTFIEQGMIKPNEMLATNIGSSFLTSLG 1251
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Match: A0A670I5Y9_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I5Y9_PODMU) HSP 1 Score: 208 bits (530), Expect = 1.240e-51 Identity = 145/460 (31.52%), Postives = 226/460 (49.13%), Query Frame = 1
Query: 19 SRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGVLQRLVVLARHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQRGRPGDFSKLFRRVYPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQT-DNDDTLALLDCLAEEAAAEEGGPLRELCARGVVEFLRYAIKQSSKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALVDRYALRLLHVAMVSLRRAHHDHSALGVADAASAAVDRSLRIIHHSVAELGDRADLLKPKNARGQLSSVQEMAQWAWDEVGAVETRFRRKCMAILLALCPLVVGTPGLPPPPSEEGTREWIWKCLKSARGDGVTEAVRVFEKTRTKATAAADPAVVGTLMRDSWGCVFALGGADEGREQAS--AERNRCELIATAADCYQFACETGVITPDELF---LQSSSLTSSG 1380
+RN + A+ + ++WDT R+ VP+ D M P+ + +D L R+ LA RQTK A E LH++VVYM+G A P GQ+ P F L++ +P +LRLA D+D+ TR L+ L M+L+ WF+ + ++ DT+ALL+ + E LR+ C + V EFL+++IKQS+ +QQ PV +L R++SLA HP+ +RLG +AFN + R REE+ALVD++ L V + SL H D +LG A AVD RII H + L P+ ++++ W + G +T R K M + L PL+ P + W+ L+ G++ ++ E G ++ + A + +E S A +++ + DCY E G+I P+E+ + SS LTS G
Sbjct: 836 NRNLVTAASTEENMKKFVSWDTEKRLSFAVPFAD-MKPV-IYLDLFLPRVTELALSASDRQTKVAACELLHSIVVYMLGKAAQIPE-GQQASPPMFH-LYKHTFPVLLRLACDVDQVTRQLYGTLVMELIHWFTNNKKFESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQSTPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQFVFEALVVYLESLALTHGDEKSLGTAQQCCDAVDHLKRIIKHKASSLNKENQRRIPRGFPQTSICLEDVVMWLLMQCGRPQTECRHKVMELFFELVPLL---------PDNKSPSSWLGDVLQK---QGISFLIKKIEG--------------GGCEGENISGILAHPTLHDLQETFSLRAVVQWMDMLLASLDCYNTFIEQGMIKPNEMLATNIGSSFLTSLG 1265
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Match: UPI0010A04E80 (DNA-dependent protein kinase catalytic subunit n=3 Tax=Lacertinae TaxID=162266 RepID=UPI0010A04E80) HSP 1 Score: 208 bits (530), Expect = 1.240e-51 Identity = 145/460 (31.52%), Postives = 226/460 (49.13%), Query Frame = 1
Query: 19 SRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGVLQRLVVLARHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQRGRPGDFSKLFRRVYPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQT-DNDDTLALLDCLAEEAAAEEGGPLRELCARGVVEFLRYAIKQSSKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALVDRYALRLLHVAMVSLRRAHHDHSALGVADAASAAVDRSLRIIHHSVAELGDRADLLKPKNARGQLSSVQEMAQWAWDEVGAVETRFRRKCMAILLALCPLVVGTPGLPPPPSEEGTREWIWKCLKSARGDGVTEAVRVFEKTRTKATAAADPAVVGTLMRDSWGCVFALGGADEGREQAS--AERNRCELIATAADCYQFACETGVITPDELF---LQSSSLTSSG 1380
+RN + A+ + ++WDT R+ VP+ D M P+ + +D L R+ LA RQTK A E LH++VVYM+G A P GQ+ P F L++ +P +LRLA D+D+ TR L+ L M+L+ WF+ + ++ DT+ALL+ + E LR+ C + V EFL+++IKQS+ +QQ PV +L R++SLA HP+ +RLG +AFN + R REE+ALVD++ L V + SL H D +LG A AVD RII H + L P+ ++++ W + G +T R K M + L PL+ P + W+ L+ G++ ++ E G ++ + A + +E S A +++ + DCY E G+I P+E+ + SS LTS G
Sbjct: 875 NRNLVTAASTEENMKKFVSWDTEKRLSFAVPFAD-MKPV-IYLDLFLPRVTELALSASDRQTKVAACELLHSIVVYMLGKAAQIPE-GQQASPPMFH-LYKHTFPVLLRLACDVDQVTRQLYGTLVMELIHWFTNNKKFESQDTVALLEAILEGIVDPVDSALRDFCGQCVREFLKWSIKQSTPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQFVFEALVVYLESLALTHGDEKSLGTAQQCCDAVDHLKRIIKHKASSLNKENQRRIPRGFPQTSICLEDVVMWLLMQCGRPQTECRHKVMELFFELVPLL---------PDNKSPSSWLGDVLQK---QGISFLIKKIEG--------------GGCEGENISGILAHPTLHDLQETFSLRAVVQWMDMLLASLDCYNTFIEQGMIKPNEMLATNIGSSFLTSLG 1304
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Match: A0A670I667_PODMU (DNA-dependent protein kinase catalytic subunit n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670I667_PODMU) HSP 1 Score: 207 bits (527), Expect = 2.910e-51 Identity = 145/457 (31.73%), Postives = 225/457 (49.23%), Query Frame = 1
Query: 19 SRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGVLQRLVVLARHEGARQTKTLAAECLHALVVYMVGCTATDPSSGQRGRPGDFSKLFRRVYPAVLRLAVDLDETTRTLFSKLSMQLVRWFSQAQT-DNDDTLALLDCLAEEAAAEEGGPLRELCARGVVEFLRYAIKQSSKRQQAEGPVAVDALLTRVFSLATHPDKNRRLGGLMAFNQLCRPLREETALVDRYALRLLHVAMVSLRRAHHDHSALGVADAASAAVDRSLRIIHHSVAELGDRADLLKPKNARGQLSSVQEMAQWAWDEVGAVETRFRRKCMAILLALCPLVVGTPGLPPPPSEEGTREWIWKCLKSARGDGVTEAVRVFEKTRTKATAAADPAVVGTLMRDSWGCVFALGGADEGREQAS--AERNRCELIATAADCYQFACETGVITPDELFLQSSSLTSSG 1380
+RN + A+ + ++WDT R+ VP+ D M P+ + +D L R+ LA RQTK A E LH++VVYM+G A P GQ+ P F L++ +P +LRLA D+D+ TR L+ L M+L+ WF+ + ++ DT+ALL+ + LR+ C + V EFL+++IKQS+ +QQ PV +L R++SLA HP+ +RLG +AFN + R REE+ALVD++ L V + SL H D +LG A AVD RII H + L P+ ++++ W + G +T R K M + L PL+ P + W+ L+ G++ ++ E G ++ + A + +E S A +++ + DCY E G+I P+E+ L SS LTS G
Sbjct: 837 NRNLVTAASTEENMKKFVSWDTEKRLSFAVPFAD-MKPV-IYLDLFLPRVTELALSASDRQTKVAACELLHSIVVYMLGKAAQIPE-GQQASPPMFH-LYKHTFPVLLRLACDVDQVTRQLYGTLVMELIHWFTNNKKFESQDTVALLEAILVGIVDPVDSALRDFCGQCVREFLKWSIKQSTPQQQERSPVNTKSLFKRLYSLALHPNAFKRLGSSLAFNNIYREFREESALVDQFVFEALVVYLESLALTHGDEKSLGTAQQCCDAVDHLKRIIKHKASSLNKENQRRIPRGFPQTSICLEDVVMWLLMQCGRPQTECRHKVMELFFELVPLL---------PDNKSPSSWLGDVLQK---QGISFLIKKIEG--------------GGCEGENISGILAHPTLHDLQETFSLRAVVQWMDMLLASLDCYNTFIEQGMIKPNEM-LGSSFLTSLG 1262 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8970.16826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8970.16826.1 >prot_H-paniculata_contig8970.16826.1 ID=prot_H-paniculata_contig8970.16826.1|Name=mRNA_H-paniculata_contig8970.16826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=874bp MCFLKSRNQLMASDASLALSDSLAWDTVPRIFLEVPYRDQMDPLTVCMDGback to top mRNA from alignment at H-paniculata_contig8970:589..8609- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8970.16826.1 ID=mRNA_H-paniculata_contig8970.16826.1|Name=mRNA_H-paniculata_contig8970.16826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8021bp|location=Sequence derived from alignment at H-paniculata_contig8970:589..8609- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8970:589..8609- >mRNA_H-paniculata_contig8970.16826.1 ID=mRNA_H-paniculata_contig8970.16826.1|Name=mRNA_H-paniculata_contig8970.16826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5244bp|location=Sequence derived from alignment at H-paniculata_contig8970:589..8609- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |