|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 2028 |
| Cds size | 1509 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig895.16816.1 >prot_H-paniculata_contig895.16816.1 ID=prot_H-paniculata_contig895.16816.1|Name=mRNA_H-paniculata_contig895.16816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=503bp
MGFSSAPTAATVATTMSHVTPPTVTSHSLGRVSNGNPGDENSSAALDEEG
PDGTTGHGSHAGVGGSKRPLSEAPWGEMFSKRARTSAERQRPALAGGSGG
GSNGGGFMGYGPAGRFSSYPRRDATHDHDVHNGNGNGMVVSTPSASAVGC
SPSSGAGASSPNLPSMHSSSSSSPSSSPLHETTKTRIVLSATSEDADVSP
HAGGESGMSPPSRAPAPMIASGHGDSSANAAARAVAVVVASSFSNSVADD
GGVRSTVGGGDTNSPDREEEYGLEDVQGGIVGVGQSNGGTLEPEYSSPSS
SSNTTFSGNTSSSASTPGSIMGALENGMSDQHQQFRSGMAEGNAGEGAPD
DFTSHSAWDRIKAMIHEQVRRAMQEHLHDLKADRERHTHQFHRLRLHQHR
HQQQQQQQQPRRSSSASEFFPARRDENCTSQGWSASGVAGGSVEEVSPSM
PEDAPTQSLDNMEFRATSALPAAGHGRSHSNSNSNDSFEDFFLRDGQTSG
WL* back to topmRNA from alignment at H-paniculata_contig895:20682..24574+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig895.16816.1 ID=mRNA_H-paniculata_contig895.16816.1|Name=mRNA_H-paniculata_contig895.16816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3893bp|location=Sequence derived from alignment at H-paniculata_contig895:20682..24574+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCAATATCTTCGACACCTCCTAGTCTGTTTCAGCAGCTGACGGCGTCCGG
GTCCTTGGCGAGCATGGGATTCTCGTCTGCCCCGACAGCTGCCACCGTCG
CGACGACTATGTCTCATGTGACCCCCCCGACCGTGACCAGCCACAGCCTG
GGTCGTGTCTCGAACGGTAACCCTGGGGATGAAAATTCCTCTGCCGCGTT
GGATGAAGAGGGCCCGGATGGGACTACGGGTCACGGTTCGCATGCCGGGG
TCGGCGGGTCCAAGAGGCCGCTGAGTGAGGCCCCGTGGGGCGAGATGTTC
AGCAAACGCGCTCGTACATCTGCTGAGAGACAAAGGCCCGCTCTTGCGGG
GGGCAGCGGCGGTGGTAGTAATGGTGGTGGTTTCATGGGCTACGGGCCGG
CAGGAAGGTTCAGCAGCTACCCCCGACGCGATGCTACGCACGACCACGAC
GTCCACAACGGCAACGGTAACGGCATGGTAGTGTCAACACCTTCTGCCTC
CGCGGTCGGGTGCTCGCCCTCCAGTGGCGCGGGCGCGAGCTCGCCCAACC
TACCCTCGATGCATTCGTCTTCATCGTCGTCGCCGTCCTCCTCGCCGCTC
CATGAAACCACGAAGACTCGAATTGTGTTGTCGGCGACGTCAGAGGACGC
CGACGTTTCACCGCACGCTGGGGGTGAGAGTGGAATGTCTCCGCCCTCTA
GAGCTCCGGCGCCTATGATTGCGTCCGGACATGGAGACTCGAGTGCTAAC
GCTGCGGCTAGGGCAGTCGCTGTGGTGGTGGCTTCTTCTTTCTCCAACTC
GGTTGCAGATGATGGCGGTGTGAGGTCGACTGTCGGGGGGGGCGACACGA
ACTCTCCTGATCGCGAGGAAGAGTATGGACTGGAGGACGTGCAGGTAAAT
TGAATGAATCCCTATTGTGACATGGCCTGAAAGTTGCGTGATGCCTGGTG
TAGACGAGGTATGATGACTTCACATCTTGGGTGTGTCGGAAAAATTGAAA
TGCTTAGTGGAAGTATACCAACGTTCTCGTCCGAGATTGATTGGGCTGTA
GATGCCACAATACGATCGTTGAGAGAGCTATGTCATTACGTCAACGCGGG
GAGTTTAGCCGTCTTTTCCATCTCTGTATTATGACGCTTAGGTATTGGAC
GCACACACAAATTGCAACCTCACGGGAAAAAACATAATTCTATCTGACCT
TTTGTCCTCTTTCTCGTCATGGCAATCTGAAGCAGCGATTGTTTCTCGGA
GGTAAGTTGCCCTTAATAAAATACACGTTTTGCCCGCGAGGTTGCTTGAG
TGTATGACGTAACAGCTACGACATGCCACACATTAGTTCCGCTACCTCGC
CCACTGACCCTCCCCATCGTACGATTTATTCACCCGGCGTCACTAATCGC
TCGTTACAGGGAGGAATTGTAGGTGTAGGTCAGTCGAATGGCGGCACACT
AGAACCCGAATATTCCTCTCCAAGTTCGAGTTCAAACACCACATTTTCTG
GAAATACTTCGAGCTCCGCGTCGACTCCAGGATCAATAATGGGAGCTTTA
GAGAACGGCATGTCCGACCAGCACCAGCAGTTCAGGTCAGGCATGGCCGA
GGGCAACGCAGGTGAAGGTGAGACGAAGGGAAGAGTGATGCGTGGTCCAC
GCCCATGTCGTTCGGCGTGCCGTTTTGCGGTGAAACCGGAAGGTGCCGAT
CTGACCGTGGTGGTCACGTTTTTCAAATCGATCTATCTCGAGAACAAGCT
GTTGCGCCGTCGGAAGAACCCGTCAATCAACAGATATCCGCAAAATATTT
CAAATGGCAAACGGTTCACGTACTGTGCACAGATGTAGCGTTCGAAAAGC
TGTCGCACCACGGGTGATAACGTCAGGTGTTACACTCAGCTATACTGACG
ATAGAAATTCGGTTCAGCAGTTGGCCTAAATTTTTATCTTGAGGCAATGT
GTAGATATGAGGACTTTTTTTTTCACGGTGTTTTATGATCGTTATATCTT
AATTACTATCCCTTCATTGTTTTCCCCTCTCGTAATCGCTTTCGGTCATT
CACGCAGCAGGTGCTCCTGACGATTTCACGTCGCACAGTGCCTGGGATCG
AATCAAGGCTATGATTCACGAACAGGTGAACTGTCATATGTTGATTGCGG
CATTCTTGAAATCTTCTGAACCCTCCTGTACTACTCGGTCGCAGTCACAT
TACCGACAGCGCAGTGTCGAGACTTTTTTACCACGAGGTGCATACATCGC
CTCCGGAAAGGCGGGGTTATATAAAGTTGCCTGGTATTCTGATGGAGAGA
ATTTGTTTTTGGGGTGAGCATAGATATAACTCAGTTGCCCATCTTGTAGG
TCAGCCGTAGGCATATCTATGCATACGGTGCGTAGCTTTCTGCACTCATA
CTAAATAGCTACATGTGTCAAGCTGTAGTACCGTAGACAGACAATTCTCG
AACAAGGCAAACGCGAGCTCCTCAGCCGACCTCGTAGTTAGGGCCAAAAG
TTTTGCCGCAAATTCATGCTCCTTTGCGCATGTAAGACAGGTATTGATTC
ATATCTCATATCCGAGGTGATCGCCCAACAGGTTCGAAGGGCAATGCAAG
AACATCTTCATGATTTGAAGGCAGACCGTGAGAGACACACTCATCAATTC
CACCGTCTGAGACTCCATCAGCACCGCCACCAACAACAGCAACAGCAGCA
GCAACCGAGACGCTCAAGCTCAGCATCGGAGTTCTTCCCTGCCAGACGTG
ACGAGAATTGCACTTCGCAGGTACTTTCCTACACACCTGGCTTTTCGATT
ATTCACTTCATGTAGTTTCCCTCGCACGCCTTGAAATTTGTTCTCTGTGT
TTACCTTCGTGGCGTGGGACTTGCCCATGTACCATCTTGTCTCCTCCTGT
TTCGTTGCTAATTTATTTGATAATAAACTTGGATAAAATGTAATGCCCCT
CTCTCCTGCCTTGTCAGGAACTCCAGTTAATTATAAGGATACCCTTGACG
TGTTTCCCCCCTGACTTGACATGCCACACGTCCTGACTTGTTCTGACCTA
AACTGTGCGCCGTGGAGCAGGGTTGGAGCGCGTCAGGTGTCGCGGGTGGG
TCTGTCGAGGAGGTATCCCCATCCATGCCAGAAGATGCTCCTACCCAGTC
CCTAGACAACATGGTGGGTGCCGGTCGTATCGAGAGGCACTACATTACAG
GGTTGTCTTAAGGCTGGAGCAGCAGCGGTCGTGCGCTAATCCATTGATTC
TCATTCAAGTTCTGACGTCCTGAACTTTTTCCTTTTTTTTTTCTGTACAT
TTTTCGTGTAACAGGAATTCCGCGCAACTAGTGCCCTTCCTGCCGCTGGC
CATGGCCGCAGCCATAGCAACAGCAACAGCAATGACTCCTTCGAAGACTT
TTTCTTGAGGGACGGTCAGACCTCAGGTTGGCTGTGAATTCGGGTTCTCG
CTTCCAATCACAACACTGCAAGCATCCAGAGGGAACCGACTCAAGGGTTG
ATATGCTGCTGCTGATGCTGCTGGTACTGCTTCTGTTTTTTCCCGAGCGA
GAGATGCTCGCTGCACGGAAAAAGAAGAAATCAACTGCTTATTCCGGGGT
ACTGTTAGAAAAAAGAAATCGATCGCTCCGGATCAATGAAGTTGATGGAT
GATGGAGCGGGCGTTCGTCTGTCTGTCTCTCACGTGTCAACTGGTGCGGT
GAAGAGGTATTCAAGTAATTCGCTGCGTACATCGATACGCGGAGTAATAT
TTTACGCGTGCATGTTCCCTTTCAGGTATCGATTTCGGGCGCCGCTTGCT
CGGCTAATGCGATAATCTACGTTGGACGGTGGGTCGCACTTCTTGAATAT
ATGTGGGTGCAATTATCACGCGCTCCGTTCTCTTGTTGGGCGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig895:20682..24574+ >mRNA_H-paniculata_contig895.16816.1 ID=mRNA_H-paniculata_contig895.16816.1|Name=mRNA_H-paniculata_contig895.16816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3018bp|location=Sequence derived from alignment at H-paniculata_contig895:20682..24574+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGATTCTCGTCTGCCCCGACAGCTGCCACCGTCGCGACGACTATGTC
TCATGTGACCCCCCCGACCGTGACCAGCCACAGCCTGGGTCGTGTCTCGA
ACGGTAACCCTGGGGATGAAAATTCCTCTGCCGCGTTGGATGAAGAGGGC
CCGGATGGGACTACGGGTCACGGTTCGCATGCCGGGGTCGGCGGGTCCAA
GAGGCCGCTGAGTGAGGCCCCGTGGGGCGAGATGTTCAGCAAACGCGCTC
GTACATCTGCTGAGAGACAAAGGCCCGCTCTTGCGGGGGGCAGCGGCGGT
GGTAGTAATGGTGGTGGTTTCATGGGCTACGGGCCGGCAGGAAGGTTCAG
CAGCTACCCCCGACGCGATGCTACGCACGACCACGACGTCCACAACGGCA
ACGGTAACGGCATGGTAGTGTCAACACCTTCTGCCTCCGCGGTCGGGTGC
TCGCCCTCCAGTGGCGCGGGCGCGAGCTCGCCCAACCTACCCTCGATGCA
TTCGTCTTCATCGTCGTCGCCGTCCTCCTCGCCGCTCCATGAAACCACGA
AGACTCGAATTGTGTTGTCGGCGACGTCAGAGGACGCCGACGTTTCACCG
CACGCTGGGGGTGAGAGTGGAATGTCTCCGCCCTCTAGAGCTCCGGCGCC
TATGATTGCGTCCGGACATGGAGACTCGAGTGCTAACGCTGCGGCTAGGG
CAGTCGCTGTGGTGGTGGCTTCTTCTTTCTCCAACTCGGTTGCAGATGAT
GGCGGTGTGAGGTCGACTGTCGGGGGGGGCGACACGAACTCTCCTGATCG
CGAGGAAGAGTATGGACTGGAGGACGTGCAGATGGGATTCTCGTCTGCCC
CGACAGCTGCCACCGTCGCGACGACTATGTCTCATGTGACCCCCCCGACC
GTGACCAGCCACAGCCTGGGTCGTGTCTCGAACGGTAACCCTGGGGATGA
AAATTCCTCTGCCGCGTTGGATGAAGAGGGCCCGGATGGGACTACGGGTC
ACGGTTCGCATGCCGGGGTCGGCGGGTCCAAGAGGCCGCTGAGTGAGGCC
CCGTGGGGCGAGATGTTCAGCAAACGCGCTCGTACATCTGCTGAGAGACA
AAGGCCCGCTCTTGCGGGGGGCAGCGGCGGTGGTAGTAATGGTGGTGGTT
TCATGGGCTACGGGCCGGCAGGAAGGTTCAGCAGCTACCCCCGACGCGAT
GCTACGCACGACCACGACGTCCACAACGGCAACGGTAACGGCATGGTAGT
GTCAACACCTTCTGCCTCCGCGGTCGGGTGCTCGCCCTCCAGTGGCGCGG
GCGCGAGCTCGCCCAACCTACCCTCGATGCATTCGTCTTCATCGTCGTCG
CCGTCCTCCTCGCCGCTCCATGAAACCACGAAGACTCGAATTGTGTTGTC
GGCGACGTCAGAGGACGCCGACGTTTCACCGCACGCTGGGGGTGAGAGTG
GAATGTCTCCGCCCTCTAGAGCTCCGGCGCCTATGATTGCGTCCGGACAT
GGAGACTCGAGTGCTAACGCTGCGGCTAGGGCAGTCGCTGTGGTGGTGGC
TTCTTCTTTCTCCAACTCGGTTGCAGATGATGGCGGTGTGAGGTCGACTG
TCGGGGGGGGCGACACGAACTCTCCTGATCGCGAGGAAGAGTATGGACTG
GAGGACGTGCAGGGAGGAATTGTAGGTGTAGGTCAGTCGAATGGCGGCAC
ACTAGAACCCGAATATTCCTCTCCAAGTTCGAGTTCAAACACCACATTTT
CTGGAAATACTTCGAGCTCCGCGTCGACTCCAGGATCAATAATGGGAGCT
TTAGAGAACGGCATGTCCGACCAGCACCAGCAGTTCAGGTCAGGCATGGC
CGAGGGCAACGCAGGTGAAGGGAGGAATTGTAGGTGTAGGTCAGTCGAAT
GGCGGCACACTAGAACCCGAATATTCCTCTCCAAGTTCGAGTTCAAACAC
CACATTTTCTGGAAATACTTCGAGCTCCGCGTCGACTCCAGGATCAATAA
TGGGAGCTTTAGAGAACGGCATGTCCGACCAGCACCAGCAGTTCAGGTCA
GGCATGGCCGAGGGCAACGCAGGTGAAGGTGCTCCTGACGATTTCACGTC
GCACAGTGCCTGGGATCGAATCAAGGCTATGATTCACGAACAGGTGCTCC
TGACGATTTCACGTCGCACAGTGCCTGGGATCGAATCAAGGCTATGATTC
ACGAACAGGTTCGAAGGGCAATGCAAGAACATCTTCATGATTTGAAGGCA
GACCGTGAGAGACACACTCATCAATTCCACCGTCTGAGACTCCATCAGCA
CCGCCACCAACAACAGCAACAGCAGCAGCAACCGAGACGCTCAAGCTCAG
CATCGGAGTTCTTCCCTGCCAGACGTGACGAGAATTGCACTTCGCAGGTT
CGAAGGGCAATGCAAGAACATCTTCATGATTTGAAGGCAGACCGTGAGAG
ACACACTCATCAATTCCACCGTCTGAGACTCCATCAGCACCGCCACCAAC
AACAGCAACAGCAGCAGCAACCGAGACGCTCAAGCTCAGCATCGGAGTTC
TTCCCTGCCAGACGTGACGAGAATTGCACTTCGCAGGGTTGGAGCGCGTC
AGGTGTCGCGGGTGGGTCTGTCGAGGAGGTATCCCCATCCATGCCAGAAG
ATGCTCCTACCCAGTCCCTAGACAACATGGGTTGGAGCGCGTCAGGTGTC
GCGGGTGGGTCTGTCGAGGAGGTATCCCCATCCATGCCAGAAGATGCTCC
TACCCAGTCCCTAGACAACATGGAATTCCGCGCAACTAGTGCCCTTCCTG
CCGCTGGCCATGGCCGCAGCCATAGCAACAGCAACAGCAATGACTCCTTC
GAAGACTTTTTCTTGAGGGACGGTCAGACCTCAGGTTGGCTGTGAGAATT
CCGCGCAACTAGTGCCCTTCCTGCCGCTGGCCATGGCCGCAGCCATAGCA
ACAGCAACAGCAATGACTCCTTCGAAGACTTTTTCTTGAGGGACGGTCAG
ACCTCAGGTTGGCTGTGA back to top
|