mRNA_H-paniculata_contig8931.16803.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Match: A0A6H5JQA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQA1_9PHAE) HSP 1 Score: 124 bits (311), Expect = 2.250e-29 Identity = 116/261 (44.44%), Postives = 141/261 (54.02%), Query Frame = 1
Query: 13 NNRKRYLILTYAAEYDRVHYPLPLAYVEDGGTRERPSLEHDISRSRE------------AGNANTQD----------NAELRRQVEVLTSRLSAAEARAERGGMREGETGEXXXXXXXXXXXVGQLR------------KLRRANEELQAQFDDLQEAHSNLRADSVAEIRRLRREAREVAKAAEEQSRQADEAMDQVVALREEVEESEKRLRKAETLGRKXXXXXXXXXXXERVTGRAMRAKIQELSTLRA----TAPDP 681
N RYLILTYAAEYDRVHYPLPLA+V+ + +R LE I R RE A N + D N ELRRQVE L +L A + A RG XXXXXXXXXXX KL R+ E+ Q+Q DDL++AH LR +S +EIR+LRREARE AK E +R A +A +QV +L++E+E E+ L +A R+ RV GRAMRAKIQELS LR T P P
Sbjct: 65 NCHNRYLILTYAAEYDRVHYPLPLAFVD---SPQRQQLERTIDRLREELSRRSLETATPARNGSKNDRAAEAQLMAENTELRRQVEALAGQLEEALSLARRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLRSVEDGQSQLDDLRDAHERLRLESASEIRKLRREAREGAKTVEMAARTASQAEEQVASLQDELEACERALAQARDKHRREVERLEKELEEGRVRGRAMRAKIQELSALRGGGATTGPRP 322
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Match: D7FWW4_ECTSI (Protein required for templated centriole assembly n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW4_ECTSI) HSP 1 Score: 116 bits (290), Expect = 4.490e-26 Identity = 100/235 (42.55%), Postives = 124/235 (52.77%), Query Frame = 1
Query: 22 KRYLILTYAAEYDRVHYPLPLAYVEDGGTRERPSLEHDISRSRE------------AGNANTQDNAELRRQVEVLTSRL-----SAAEARAER----GGMREGETGEXXXXXXXXXXXVGQLRKLRRANEELQAQFDDLQEAHSNLRADSVAEIRRLRREAREVAKAAEEQSRQADEAMDQVVALREEVEESEKRLRKAETLGRKXXXXXXXXXXXERVTGRAMRAKIQELSTLR 663
KRYLILTYAAEYDRVHYPLPLA+V+ + +R LE I R RE A N + D A + V + R A E RA + GG R G + R RR EE +Q DDL++AH LR +S +EIR+LRREARE AK E + A +A DQV +L+EE+E E+ L +A R+ ERV GRAMRAKI+ELS LR
Sbjct: 152 KRYLILTYAAEYDRVHYPLPLAFVD---SPQRQQLERTIDRLREELSRRSLETATPARNGSKNDRAAEAQLVAGGSRRRCRWPDGAGERRARKDFSAGGHRGGRSSGGCDEH---------TRSCRREEEEA-SQLDDLRDAHERLRLESTSEIRKLRREAREGAKTVEMAASTAGQAEDQVASLQEELEVCERALAQARDKHRREVDGLDKELEKERVRGRAMRAKIRELSALR 373
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Match: A0A150G4X0_GONPE (VFL3 protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G4X0_GONPE) HSP 1 Score: 60.8 bits (146), Expect = 7.000e-7 Identity = 56/149 (37.58%), Postives = 66/149 (44.30%), Query Frame = 1
Query: 10 ANNRKRYLILTYAAEYDRVHYPLPLAYVEDGGTRERPSLEHDISRSREAGNANTQDNAELRRQVEVLTSRLSAAEARAERGGMREGETGEXXXXXXXXXXXVGQLRKLRRANEELQAQFDDLQEAHSNLRADSVAEIRRLRREAREVAK 456
A N KRYLI+TYAAE+DRVHYPLPL Y E+ P +H L+R + L S + A +A A G R G G LR+LR N L+ Q L E ADS E R L RE R V K
Sbjct: 110 APNNKRYLIMTYAAEFDRVHYPLPLLYEEN------PDPQH------------------LKRIISQLRSEVEALQAEA--GSSRRGGGGAGGSDVSVD------LRRLREENAALRQQIRQL-ERSGGAAADSDPEARELSRELRMVRK 225
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Match: A0A024GF25_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GF25_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 8.250e-7 Identity = 47/143 (32.87%), Postives = 75/143 (52.45%), Query Frame = 1
Query: 13 NNRKRYLILTYAAEYDRVHYPLPLAYVEDGGTRERPSLEHDISR-SREAGNANTQDNAELRRQVEVLTSRLSAAEARAERGGMREGETGEXXXXXXXXXXXVGQLRKLRRANEELQAQFDDLQEAHSNLRADSVAEIRRLRRE 438
++ KRYLILTYA E+DRVHYPLPL +VE T LE + R R+ + T++ LRR++ VL + +A AE+ + QL++L + ++ + +L EAH+ L+ S ++ +L+RE
Sbjct: 134 SDSKRYLILTYAVEFDRVHYPLPLCHVEAPDTE---ILERIVRRLRRQLHDITTEETTALRRKIAVLEDEHRSFKALAEKSSEKNTHGAPDPPQKENF-----QLKELELELQTMKEENHELMEAHTQLQRRSQEDLLQLKRE 268
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Match: A0A836CMQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ7_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.420e-5 Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 16 NRKRYLILTYAAEYDRVHYPLPLAYVEDGGTRERPS-----LEHDISRSREAGNANT----------QDNAELRRQV 201
N KRYLILTYA E+DRVHYPLPLA+ EDG + E L D++ +R A A + Q+NA+LR QV
Sbjct: 129 NTKRYLILTYAVEFDRVHYPLPLAH-EDGASAEALQRVVRRLREDLAAARAAAAAQSESGGAADALRQENAQLRAQV 204
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Match: A0A7S3QTT9_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QTT9_DUNTE) HSP 1 Score: 52.8 bits (125), Expect = 2.890e-5 Identity = 24/29 (82.76%), Postives = 25/29 (86.21%), Query Frame = 1
Query: 10 ANNRKRYLILTYAAEYDRVHYPLPLAYVE 96
A N KRYLILTYAAE+DRVHYPLPL Y E
Sbjct: 10 APNNKRYLILTYAAEFDRVHYPLPLLYEE 38
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Match: A0A8J6CGH8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CGH8_DIALT) HSP 1 Score: 55.8 bits (133), Expect = 3.820e-5 Identity = 58/182 (31.87%), Postives = 85/182 (46.70%), Query Frame = 1
Query: 10 ANNRKRYLILTYAAEYDRVHYPLPLAY-VEDGGTRERPSLEH---DISRSREAGNANTQDNAELRRQVEVLTSRLSAAEARAERGGMREGETGEXXXXXXXXXXXVGQLRKLRRANEELQAQFDDLQEAHSNLRADSVAEIRRLRREAREVAKAAEEQSRQADEAMDQVVALREEVEESEKR 543
+ + KRYLI+TY AEYDRVHYPLPLA+ + + R L ++ R G + A L R+ L ++L A A R G+ E + +LRRAN +L+ EA +R ++ E++ ++RE +A S AD A D A RE E+E+R
Sbjct: 112 STSSKRYLIITYVAEYDRVHYPLPLAFELAPSAAQMRAQLRELRAEVEALRRGGGRAPAECARLERECAELRAKLEKRTADARTAERRLGDAAELE----------ARYDELRRANAQLE-------EALETVRREAHREVKAIKRECARLA------SEHADGAPDGTAA-RELAAEAERR 269
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Match: A0A8K1FMF0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMF0_PYTOL) HSP 1 Score: 55.5 bits (132), Expect = 4.480e-5 Identity = 49/145 (33.79%), Postives = 72/145 (49.66%), Query Frame = 1
Query: 22 KRYLILTYAAEYDRVHYPLPLAYVEDGGTRERPSLEHDISRSREAGNANTQDNA--ELRRQVEVLTSRLSAAEARAERGGMREGETGEXXXXXXXXXXXVGQLRKLRRANEELQAQFDDLQEAHSNLRADSVAEIRRLRREAREV 450
KRYLILTYA E+DRVHYPLPL VE T +L+ I R R+A +T ++ +L+ ++ L + ++ + E G QL L+R E + +L + + LR DS AEI RLR E +++
Sbjct: 139 KRYLILTYAVEFDRVHYPLPLQLVE---TPTPETLQRTIRRLRQALTTSTTESKAPQLQEEIAALREENRCLKNTLQQYCGSDAENGGDARNLRERNGSGDQL-DLQRELEASMQENKELIKIYQQLREDSTAEITRLRAEIKQL 279
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Match: D8UIW0_VOLCA (Uncharacterized protein Vfl3 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UIW0_VOLCA) HSP 1 Score: 55.5 bits (132), Expect = 4.830e-5 Identity = 65/193 (33.68%), Postives = 92/193 (47.67%), Query Frame = 1
Query: 10 ANNRKRYLILTYAAEYDRVHYPLPLAYVEDGGTRERPSLEHDISRSR--------EAGNAN-TQDNAELRRQVEVLTS---RLSAAEARAERGGMREGETGEXXXXXXXXXXXVGQLRKLRRANEELQAQFDDLQEAHSNLRADSVAEIRRLRREAREVAKAAEEQSRQADEAMDQVVALREEVEESEKRLRK 552
A N KRYLI+TYAAE+DRVHYPLPL Y E+ + L+ IS+ R EAGN ++ +AELRR E T +L E R G G L+ R+ + LQA+ L+ A + L + R LRR A+E + EE R + + + +R+ E++E R R+
Sbjct: 109 APNNKRYLIMTYAAEFDRVHYPLPLLYEENPDPQH---LKRVISQLRAEVEALQSEAGNRRGSEASAELRRLREENTGLKHQLKQME--------RVGSPGAGQDQSADARELSRDLKTARKERDLLQAR---LEAAEAELERERGVHRRELRRRAKEQQELIEELGRCKEVIRELKMRVRQLTEDTEMRDRR 287
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Match: A0A7S0K2G7_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K2G7_CAFRO) HSP 1 Score: 54.3 bits (129), Expect = 7.300e-5 Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 1
Query: 13 NNRKRYLILTYAAEYDRVHYPLPLAYVEDGGT----RERPSLEHDISRSREAGNANTQDNAELRRQVEVLTSRLSAAEARAERG 252
++RKRYLILTY E+DRVHYPLPLA+ ++ R L D++ R A AE R+++ L RLS EAR E G
Sbjct: 23 HSRKRYLILTYTVEFDRVHYPLPLAFEDEPSAESMQRTIRRLRRDLAEQRSAAAGAPDPRAE--RELQALRVRLS--EAREEAG 102 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8931.16803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8931.16803.1 >prot_H-paniculata_contig8931.16803.1 ID=prot_H-paniculata_contig8931.16803.1|Name=mRNA_H-paniculata_contig8931.16803.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp SSNANNRKRYLILTYAAEYDRVHYPLPLAYVEDGGTRERPSLEHDISRSRback to top mRNA from alignment at H-paniculata_contig8931:486..4851- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8931.16803.1 ID=mRNA_H-paniculata_contig8931.16803.1|Name=mRNA_H-paniculata_contig8931.16803.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4366bp|location=Sequence derived from alignment at H-paniculata_contig8931:486..4851- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8931:486..4851- >mRNA_H-paniculata_contig8931.16803.1 ID=mRNA_H-paniculata_contig8931.16803.1|Name=mRNA_H-paniculata_contig8931.16803.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1680bp|location=Sequence derived from alignment at H-paniculata_contig8931:486..4851- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |