mRNA_H-paniculata_contig893.16801.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig893.16801.1
Unique NamemRNA_H-paniculata_contig893.16801.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: D8LKY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY0_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 1.180e-113
Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 3
Query:  822 REGAMSSTSSAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
            R+ ++SS S+APARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKN CVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQS  SRELIQKVTNV+TNP NDHLPLDAASRLCNSDLL RTEQLICFAFHDS TIIET+KEARS NMIVTELYLD
Sbjct:  122 RQPSLSSQSAAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSAASRELIQKVTNVVTNPVNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 316          
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A835ZAP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP1_9STRA)

HSP 1 Score: 293 bits (750), Expect = 3.130e-94
Identity = 150/188 (79.79%), Postives = 165/188 (87.77%), Query Frame = 3
Query:  843 TSSAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
            +S  P   +IPT VAVVG PQ  VEKEYSI+ ILKELAEIQ QGPKNYC+LGTRHCSFLHQQIIELLAYALVLSGNHVFTSGA GTNAATIRGALRAER +LLTVVLPQSL KQS+ S+EL+ +V NVI  PQNDHLPLD ASRLCNSDLL R +QLICFAFHDSHTIIET++EAR+ +MIVTEL+LD
Sbjct:    9 SSPQPTTVKIPTKVAVVGRPQIRVEKEYSIDTILKELAEIQRQGPKNYCILGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAGGTNAATIRGALRAERPDLLTVVLPQSLAKQSDESQELLTQVQNVIDAPQNDHLPLDVASRLCNSDLLSRADQLICFAFHDSHTIIETAREARALDMIVTELFLD 196          
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A6V2EYW5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EYW5_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.110e-73
Identity = 123/173 (71.10%), Postives = 148/173 (85.55%), Query Frame = 3
Query:  891 VGAPQQ-VVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
            VG PQ+ V+EKE S+ +ILKELA IQ QGP+ YCVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ++ S+EL++ VT+++T PQND + LD ASR+CNS LL +T+QLI FAFH+S T+IE SKEA+  +M+VT LYLD
Sbjct:  104 VGDPQKLVIEKEMSVTSILKELAAIQAQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLNKQTKESQELLKDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 276          
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A7R9YDI6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDI6_9STRA)

HSP 1 Score: 240 bits (612), Expect = 5.610e-73
Identity = 126/180 (70.00%), Postives = 145/180 (80.56%), Query Frame = 3
Query:  870 IPTDVAVVGAPQQVVE-KEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
            IP  V +VG PQ V   K Y+I++ILKELA IQ QGPK+YC+LGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGALRA   +LLTVVLPQS+ KQ   S++L+ KV NV+   QND L LD ASRLCNSDLL R EQLI FAFH+S T+IE +KEA+S +M+VT LYLD
Sbjct:   62 IPDVVPIVGEPQAVFTGKNYTIDSILKELAAIQQQGPKSYCILGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTNAAAIRGALRAGAPDLLTVVLPQSISKQPAESQKLLAKVKNVVEMSQNDGLGLDMASRLCNSDLLSRAEQLIAFAFHNSRTVIEATKEAQSRDMVVTVLYLD 241          
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A7S2XNC9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNC9_9STRA)

HSP 1 Score: 240 bits (612), Expect = 4.150e-72
Identity = 123/175 (70.29%), Postives = 150/175 (85.71%), Query Frame = 3
Query:  888 VVGAPQQ--VVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
            +VG PQ+  V EKE+S+ AILKELA IQ QGP+ YCVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAER +LLTVV+PQSL KQ++ S+EL++ VT++IT PQND + LD ASR+CNS LL +++QLI FAFH+S T+IE +KEA+  +M+VT LYLD
Sbjct:  130 LVGDPQRKMVKEKEWSVSAILKELAAIQQQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAERPDLLTVVVPQSLGKQAKESQELLKDVTDLITMPQNDDMSLDVASRICNSYLLSQSDQLISFAFHESTTVIEATKEAKELDMLVTTLYLD 304          
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A7R9WLF4_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLF4_9STRA)

HSP 1 Score: 240 bits (613), Expect = 5.280e-72
Identity = 124/183 (67.76%), Postives = 153/183 (83.61%), Query Frame = 3
Query:  861 RTEIPTDVAVVGAPQ-QVVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
            R E+  + A VG PQ +V EKE S+  ILKELA IQ QGP+ YC+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAER++LLTVVLPQSLEKQ + S+EL++KV ++I  PQND + LD ASR+CNS LL +T+QLI FAFH+S T+IE +KEA++ +M+VT L+LD
Sbjct:  141 RLELQRETANVGKPQLRVKEKEQSVTDILKELAAIQQQGPQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAEREDLLTVVLPQSLEKQPKESQELLEKVDDLIEMPQNDGMSLDVASRICNSYLLSQTDQLISFAFHESTTVIEATKEAKTLDMLVTTLFLD 323          
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A7S2I159_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I159_9STRA)

HSP 1 Score: 239 bits (611), Expect = 9.270e-72
Identity = 121/173 (69.94%), Postives = 148/173 (85.55%), Query Frame = 3
Query:  891 VGAPQQVVEKE-YSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
            VG PQ+++EK+  S+ +ILKELA IQ QGP+ YCVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ++ S+EL++ VT+++T PQND + LD ASR+CNS LL +T+QLI FAFH+S T+IE SKEA+  +M+VT LYLD
Sbjct:  147 VGDPQKLLEKKSMSVTSILKELAAIQAQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLHKQTKESQELLKDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 319          
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A7S2SV08_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV08_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.690e-71
Identity = 121/195 (62.05%), Postives = 153/195 (78.46%), Query Frame = 3
Query:  834 MSSTSSAPARTEIPTD----VAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
            M+ST   P +++ PT     V +VG PQ+ +++ YS+E ILKELA IQ  GP+ YC+LGTRHCSFLHQQIIELL+YALVL+GNH++TSG+ GTNAA IRGALR ER ELLTV+LPQSL KQ   S+EL+++V NV+ N +ND L LD ASRLCNS LL   +QLI FAFHDS+T+IE S+EA+  +++VT LYLD
Sbjct:   83 MASTGGNPLQSQ-PTSSRPPVPIVGEPQRKLDQSYSLEQILKELAAIQQTGPRKYCILGTRHCSFLHQQIIELLSYALVLTGNHIYTSGSQGTNAAAIRGALRGERPELLTVILPQSLTKQPLESQELLKQVKNVVENSKNDDLSLDVASRLCNSKLLVSADQLIAFAFHDSYTVIEASREAQDLDIVVTTLYLD 276          
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A1E7FA35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FA35_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.200e-70
Identity = 113/164 (68.90%), Postives = 141/164 (85.98%), Query Frame = 3
Query:  915 EKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
            E++YS+  ILKELA IQ QGP+ Y +LGTRHCS+LHQQIIELLAYALVLSGNHVFTSGA GT+AA +RGALRAER++LLTVVLPQS+ KQ++ S+EL+ KV +VIT PQND + LD ASR+CNS +L  T+QLI FAFH+S+T++E SKEA++ +M+VT LYLD
Sbjct:    1 ERDYSVTNILKELAAIQQQGPQKYSILGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAGGTHAAAVRGALRAEREDLLTVVLPQSMSKQTKESQELLDKVDDVITMPQNDDMSLDVASRICNSYILSLTDQLISFAFHESNTVVEASKEAKALDMLVTTLYLD 164          
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A448ZCS9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCS9_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.290e-70
Identity = 121/173 (69.94%), Postives = 145/173 (83.82%), Query Frame = 3
Query:  891 VGAPQ-QVVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
            VG PQ +V  K+ S+  ILKELA IQ QGP+ YC+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GTNAAT+RGALRAER++LLTVVLPQSL KQ+  S+EL++KV ++IT PQND L LD ASR+CNS LL  T+QL+ FAFH+S T+IE SKEA+  +M+VT LYLD
Sbjct:  174 VGDPQLRVKVKDKSVTDILKELAAIQQQGPQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAPGTNAATVRGALRAEREDLLTVVLPQSLSKQTSESQELLKKVDDLITMPQNDELSLDVASRICNSYLLSLTDQLVSFAFHESTTVIEASKEAKKLDMLVTTLYLD 346          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKY0_ECTSI1.180e-11392.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAP1_9STRA3.130e-9479.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V2EYW5_9STRA1.110e-7371.10Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7R9YDI6_9STRA5.610e-7370.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XNC9_9STRA4.150e-7270.29Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7R9WLF4_9STRA5.280e-7267.76Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A7S2I159_9STRA9.270e-7269.94Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2SV08_9STRA2.690e-7162.05Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1E7FA35_9STRA1.200e-7068.90Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A448ZCS9_9STRA2.290e-7069.94Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig893contigH-paniculata_contig893:17068..25596 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.1
Seed ortholog evalue3.1e-94
Seed eggNOG ortholog2880.D8LKY0
Hectar predicted targeting categorychloroplast
EggNOG OGs28KAM@1,2QSRD@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1487
Cds size1065
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig893.16801.1prot_H-paniculata_contig893.16801.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig893 17146..25021 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931117.044017-UTR-H-paniculata_contig893:17067..171451622931117.044017-UTR-H-paniculata_contig893:17067..17145Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig893 17068..17145 -
1691481597.8842757-UTR-H-paniculata_contig893:17067..171451691481597.8842757-UTR-H-paniculata_contig893:17067..17145Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig893 17068..17145 -
1622931117.151104-UTR-H-paniculata_contig893:25021..250801622931117.151104-UTR-H-paniculata_contig893:25021..25080Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig893 25022..25080 -
1691481597.9440565-UTR-H-paniculata_contig893:25021..250801691481597.9440565-UTR-H-paniculata_contig893:25021..25080Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig893 25022..25080 -
1622931117.172147-UTR-H-paniculata_contig893:25311..255961622931117.172147-UTR-H-paniculata_contig893:25311..25596Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig893 25312..25596 -
1691481597.95371-UTR-H-paniculata_contig893:25311..255961691481597.95371-UTR-H-paniculata_contig893:25311..25596Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig893 25312..25596 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931117.063692-CDS-H-paniculata_contig893:17145..173401622931117.063692-CDS-H-paniculata_contig893:17145..17340Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig893 17146..17340 -
1691481597.8958857-CDS-H-paniculata_contig893:17145..173401691481597.8958857-CDS-H-paniculata_contig893:17145..17340Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig893 17146..17340 -
1622931117.0837061-CDS-H-paniculata_contig893:17957..180541622931117.0837061-CDS-H-paniculata_contig893:17957..18054Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig893 17958..18054 -
1691481597.907316-CDS-H-paniculata_contig893:17957..180541691481597.907316-CDS-H-paniculata_contig893:17957..18054Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig893 17958..18054 -
1622931117.1013794-CDS-H-paniculata_contig893:20426..205151622931117.1013794-CDS-H-paniculata_contig893:20426..20515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig893 20427..20515 -
1691481597.9183178-CDS-H-paniculata_contig893:20426..205151691481597.9183178-CDS-H-paniculata_contig893:20426..20515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig893 20427..20515 -
1622931117.117853-CDS-H-paniculata_contig893:21387..215071622931117.117853-CDS-H-paniculata_contig893:21387..21507Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig893 21388..21507 -
1691481597.9271097-CDS-H-paniculata_contig893:21387..215071691481597.9271097-CDS-H-paniculata_contig893:21387..21507Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig893 21388..21507 -
1622931117.1348872-CDS-H-paniculata_contig893:24457..250211622931117.1348872-CDS-H-paniculata_contig893:24457..25021Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig893 24458..25021 -
1691481597.9355268-CDS-H-paniculata_contig893:24457..250211691481597.9355268-CDS-H-paniculata_contig893:24457..25021Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig893 24458..25021 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig893.16801.1

>prot_H-paniculata_contig893.16801.1 ID=prot_H-paniculata_contig893.16801.1|Name=mRNA_H-paniculata_contig893.16801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp
MRCSAPLVSLVALIQFPNSSAFLISQHYSHYLIPTLRSTARQQATMRKCS
SGAAAVAILHKSQSSDRFPRDRLRNRSSDVGRASMSSAGADGADPAASVP
SRSGDADIFIQVTAARNVQSSGSVDKVDAGATAAMGDDSAVLVGPARELL
GGMAWTDKRREGAMSSTSSAPARTEIPTDVAVVGAPQQVVEKEYSIEAIL
KELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAM
GTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQN
DHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTE
LYLD*
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mRNA from alignment at H-paniculata_contig893:17068..25596-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig893.16801.1 ID=mRNA_H-paniculata_contig893.16801.1|Name=mRNA_H-paniculata_contig893.16801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8529bp|location=Sequence derived from alignment at H-paniculata_contig893:17068..25596- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AATAAACCCCCAGACTACTTCCCTTCTACTGTCACCTCCTAGCTTTGTGA AAAGGCTACCTTCCACCCGCTTAGGACGAGGCATAAAAAAATTGAATCGA TTGTCCAACTCGTCAGACGCTTGTGTTTTGGATCCCTAGAGTCCCCAACA AACGTGCTGTTTCCTGCTGCCTGTACTGCAACAGTGCAAAGGTGTAGACC AGCAATACATCTCCAGAGTCAGCTGAGGGGCTTTGCTTTGGATCAAAGGG CTACGTACTGCTATCAGGCGTCGTGCAGAAGACAGGTATGCTCGTTGGTT TGTTTGCCGAGGTACGTATGTTTTGCGGGTGAGTGGATGTCTCGCTTGTC GAAAACTCTGGTTTGACTCTCCTCTCGCAGGTTTCCGCGAAACCTATCAT GATCTCTCAGTCTCCCAAAACGCGCATAAACTCTTTCTTCGCACTCCTTT TCGTGACAGTCATTCCTTTATCATGCTAATAATAATATTGCAACCCCTTT CACCCGACGCTCACAGGTGCAACACGCAGAGACAGCAGCTGTCAGCAGGC AGAACGACTACTACAGAGGGGAAGGATGCGGTGCTCAGCACCGCTCGTGT CCTTGGTGGCGCTAATTCAATTTCCAAATTCATCAGCTTTTCTCATCTCA CAGCACTACAGTCACTATCTCATTCCGACGTTGCGCTCTACCGCTCGCCA ACAAGCAACAATGCGCAAATGTTCTTCGGGGGCAGCGGCGGTAGCCATTT TACACAAGTCTCAATCCAGCGACCGATTTCCGCGTGATCGCTTACGGAAT CGTAGCAGCGACGTAGGGCGTGCGAGCATGAGCTCCGCGGGGGCGGACGG GGCCGACCCTGCCGCGTCTGTGCCATCGAGATCAGGTGACGCTGACATTT TCATCCAGGTTACAGCAGCGCGCAACGTGCAGTCCTCCGGTAGCGTAGAT AAAGTTGATGCTGGTGCTACCGCCGCTATGGGGGATGATTCTGCGGTTTT GGTCGGGCCAGCGAGGGAGCTCCTTGGCGGGATGGCGTGGACGGATAAGC GAAGAGAAGGGGCGATGTCTAGCACGTCGAGCGCGCCCGCGCGAACGGAG ATTCCGACAGACGTGGCGGTGGTTGGGGCTCCGCAACAGGTACTATGTGT CCCGATGTAATCGTAATTGTTTCGGAACATTTTTCAGTTTGTAGTCAAGT AACTCCTCAAAACAAATCTCCGCCGATAGTGTCTCAGTACATCGGAGTGC AGTGAGCCGTTATCCATGGTTCGTGGGTTTTGGATAATGACTACATGGGT ATAAGAGAAACATATGATCTTCATGGACGTAATAACTGTGACAGCATGAA TTTAATAGTGGGCGACAGGCAGATTCTGTTATACCTTGATAGTTTCGGCT AGAAACAGGTATAGTGTCAACGAGCTATACAGCGCCGCTCAAATACGCCC ATCTATCTGATTGGCGGAGACAGCTTCGTACGTGACCGTGGCCGAAATGC TCGCCAAATCACCTGGAATTGACTACCTTTTCCCATAGCCTACACCTGGA TGTCGGCAATTACCTGAAACTGGCCGAAATTGTTATACCTGAAACTACCA ACAACAATCCCTTCCACAGTAGCAAAAAGCGCACCCGCACCCCCTGCTTC CTCTTCCCTCCGCAAAATGGCCAGTGGCAGCTCGTACCATTTGCTCGACT CTTTGTCAACCTAATCTCCGACACCCACCCACATGCGGCATGCATCCTAG ACTACTTAGTGGGCAAAAAACTATTTAACCCCACGAAATAGCCACACAAA TCACCCTGAGATAGGCATATAAATGCATGTTGGGCATCCATGAATGACAA TAGCCCGTCACTCACCCCGCCAGCCAGTCAAAACACCATCTCGCCGTATG TTAAGACCAAGAACGAGTAATGTTGTGTGGCAGGAGAGGTTGTAAGGGGT TTCTTACTAGGCAACATGGCGGAGTTCGTGCCGGTTGAATTAGGGCACAG GTTTCAACCCCTGGATAAAGACGACTACTTCGCGCCTTCGCTACGAAAAT GTTAAAACATTCGCTAAGTTTCAGAATGAGCGGACCCCTGTTCATTCGAT TCACGAGTATTATATCCAGTCGTGGATAGTCCGGGGCATATAGAATACAC GAGTTCACTCTGAAACTCAGGCGAATATTTGTTCAAGTGTACATTCAGTG GAAAATGACCATAACATGTGGGAAAACATCGATCGATATGTTTTCCGACC ACCGTCTTGCAGTATGATGATATTATCCCATGTTTCGTTCCAATCCACAA CCCTCGTGTTTTTTCATTGAATGGTTAGTGCTTTACATGAGAACGAGAGT TGCTCTGCTTATGGCAATCGACTGCTTCCGAGTGACAGGCGGTATGTATG GCCTACTTGGCGCACTTTTCTTTCGGTCAGGTCAGAGTGCTGCAAGTCAA TTTTCCACATGGACAGATATGGAACGAGAAATTATTCAAACTTTCCAGCC TGCGGTCTTTTTTTCTTTTTGTACATCGCGTTGCAGATGCATTTAACCCA GGTAAACGTTAGGTTGAGTCTTAGCAGCCTTTGATGTCACAGCAGTAGTA GAATTTAGCACTGCCCAGTTATACGAACATCGTTTTTCGTCAACAGGTGA TCGTTTCACCGACACAATTGTGTGTACTGTATTAGACTGCTGTGTTTCGG CATGTAGATGAGTGGCGCTGGACGCGGTACACTGTAGTGCTGTGTGTAGC CCCCCGCCAAGGACTCGTAACTCCCGATGCAGCTGAACCTTTTGCACGAG ATACCTGTTGGATCTTCACTGCGTGAACAATCGTATGATGTTGAATCAAG TGAAGAATGTACCCATTGTTGATTCGGAGAAAAAAATGATTCCCTGGTGG TTCAAGTATTAGGCATGGGCGCAAAATTCTACCAGGCACAGACCAGCAAT AGCCAATTGCCAATGGCAGATCGGAATTGATTCTCCGCTGCGCTTTAGCG TTGTGATCGTGTAGTCATGCTTGATGTACACAGTCGGTCACTTGGGGTTG AGGTTAATGAGATGCCCTTCTCTGCTGTCAAAATGCTGTGCGAGCGAACC AACCAGCTAACGCCGATGGCTCACGTACGTCAAGCCGGTGGCGTCGATGG CGGATGGCGATGGCCAGGTCGTCTGGACTCAACTCAACAGCCCTGTTGAA TCCCGGATATTGGAATGGAAGACAAGAACGTCAATGATTTAAGAAATGAG ACCCATTGGTGCTAGAACCGCTTGTAGGTAGCGGAGAACATGAAAGCAAT GGATTCTATCTCTTCATCACGTGCGATATTAAAATATCAACAAGTGCAAA TCAACATGCTAGCGATAGTTCAGTCGACCATCACAGCTTACGGTATTGCT CTTTCTTTTCTACTGCTATACCTCATGTATGATGACGAAACAGACCGAAT TTTGAAGATTTGCGTGTTGTTTTTTCGATTTGGCACATGTCTGCGTTTGT TCCGGTCCGGTTCGATCATAGCCATAGTCACGCGAAAACACGAAAGTCTC TCATAATCCATAGGGTAAAGTAGTACTTGATGTTGCTGAATAACTGTTGA AGTCTGTACCCAAATAACTTCCAACGAAAAACCTTCGCCGACATGTATTG TTTGTACAGAATATTCCTCGCAACCATAGTGGTCGGGAACGAAACACGTG CTGCGTAGGCGTAGTTGTGTCTTTACTACTAAACTTTGGTCCCCTACGGC GCGTCTTCCGTTTGGTCAAGAAGTCGAAAATGAACGACTAGCATACTCGA TTCGACATACCGTAAAAGTTTGCGAAGCCTGCATGATACCATGCAAGCGC GCAATCCTCTCACTCAACTACTGTAGATCAATATACTCGAGTAGTAGTAT TGGAAGCTGTTTCGAAAGGAAGACCGCCACCATCACCATCACCGCCACTG CCGCCGCCTGAAGCACACGATATCAGTCGGGTTCGTATCGTCGAAGGATC TTCCTCGCGGGTGTGTTATTGTGTCTGCCTTTGGTGGTCTTAATATGTTT ATCCTTCACCTCGTTCCATGTTATGATACGATTGACCAGGTAGTGGAGAA GGAATATTCTATAGAGGCGATTCTCAAGGAGCTTGCGGAGATTCAAAACC AGGGGCCGAAGAACTACTGTGTCTTGGGCACAAGGCACTGTTCCTTCTTG CACCAGCAGGTAGGTAGCCAACCGTGTTGTGTTTCTGGAGGAACGAACGT TTTCGTTCGAGGTGGAAGCTGTGTTGACACCTCCGAACTCAGCCTGTTCG GGGAGTTCAGTAGACGTTCGTGAAAAAAATGCCATTTGACCTAAAACATT TTCGCTTGGGGCATGTGGATTGGTTGATTGAGATTCACAGCTACTGCGTA AAGCTGTACGATTAGCGTAGTACTTGGTTGTAATATTCAACCTATTAACA TGCGACAGAGGAGAAATAAAGATTTTGATTTCGATTTCGAATAGTAGGGG TTTCAATTTCGGCACAAAATATGTCCCAGCCTGAAAGCCATAGCAGACAC CTCACACGTCTCTGCTTCCTGTGCCTTTCTGTTGGTGTGTTTTCTCTTCT GTTTTATTCTGCTTATTTTGTTGTAAGATGCTATATTTTTGTAGTCTGAG TTTCTGGGGCGGTTTTATTTTCTGCACAAAACCCATTGTCTCCCTGGCTT GTTAATTCTTGTTTTGCTGTCTGCTGTTGCGTTATTTTTATCTCATCTTG CGGTGACACACAAAAAGGACGGCGGTTGCGTTATCCAGCGCGGCAGGTGA CGACTGAACCGTAGCAGCTTTGATACTTGGCTTGTCATTTTCGTTGCTTC AGTACGTCGTTTCCTCTCCGTTAGGCAATGTATCATAAGAATGCTGCTGT AACCTCATTCCTCTTTGTCATATTTTTTATCTCTTTCTGGAAGGACAGCC TCTGTTTGCTTTTCTGCAGTTTGTCATTTTCCGTTGTTGCTGTGGCGTGA CTGTAGCTGTAATTGCGATAACAGTTGTCGTACCTGTGTGTTGGTCGCCC CTCTCCCTCCTCTTTCCGCTGTTGTTTCTAGATCATCGAGCTACTGGCGT ACGCGTTGGTGCTAAGTGGGAACCACGTCTTCACTTCTGGGGCAATGGGA ACTAATGCTGCGACAATCAGGTAAATGCGAAGTATTAACCCGTATGGTAC CGGACCCTATACAACCCCCAGACAATTGCCTGCCTAGAAAAGGTGCCCTG GACGATTTATTCAACATGCGTACACTCCGCGAAGATAAAGGCATTGGGGC GGCGAGATATATGTTAAGGTCATATATCCTCATGTTTGTTCTGGAACCCC CCCCCCCCCATGCCCTTTTCGTGGCGGTTTCGCGGGCGGGACTGTCATAT TATTTTATACTATATTTCAGGGTCTCGGGCCATAGGGGTTAAATGCATCA GAAACTCATCAGGGCTGGTTTGTGCTAGGTTGGGGTTGGAGCTGTAGGTC TCAATACTCGAAAGAGTCAAACAAGAGCGTTATGTAAGCAACCACAGAAG AAAGATTCGCCGGCGATTTTATCCCATGGGCTTTCTATGTCGGGCTGTAT ATGTCCAACTTCACGCTGTTGCCAGTGCCCTGCCGAGTGCGGGACTGTCA GCCCGGCGGGAGAAGAAAAAGCGGAAGAACAGGAACAGTCCACCTTAGAG CTTTGGACCATTCGTTCGTGGCTTGCAAGTGGTAGATGTCATAGAACTTG ATGCTGACAAGAGACGTGAAGTGATAAAAGAGAGAGTCACCGAGGTGACA CGAACAAATATAAAGGAGGGCCTTCTGTGTCAATCTGCAGTCGTGTAGTA TTCCGATCAAGTCACCGCCACCGCCTGGTCCTTAAACCAGTGCATCTGCT TCTATATTTCCCCCTGACCGCAAATGCCCGAAAATCAGTGAGAAAGGTGC CAGCCTTTGACATCGCACGCCGTGATATTATTTTCCAAACCCGATTTTCT CAAGAAGCAAGAGTCTGTACTGTCGAAACAGCAGGTCTATCGAAAGATCT GAACGAAACCTTTCCAACGATACCGCTATCGGTATCATGAGCAAGCACCG TGATTGTCGAGAGAATAATCGCAAAAATAATATTAGGGGTGTTAAGAGCA CGTTCTTAACGTTCCTGGGATTCCTGAGCGTCGGTCCCCTGCACAGCATC CGGAGGCGTTTCCACCCATTTTGAAATGACATGTGTGGAAGATTGGAAAA TTGATATTTCTCGAGAGGTCAACAAGAACAACACTGCGAAATCTAGCTTG TAACGCTGCCCGCGTCAGACGTCGACCTTTGCGCGGTACTTTGTCGCATA TATCAAGTACTATTGGGTAGGCAGGCCACGGTCACATACGCTAGCGGTGT ACCCCATTTAGACCCCATCAAACTGTTGAGTGTTACGCGAGACTTGGGAA ATGGCGCTTGAATGAAATAAGGGCCAGAAAAATTCTGAGAGGGATGTCGT CATCATCTTTATCATCGTCATCATCAGATTACTTGTTCACGTGGATACTG CGCTGATCCGTTTGCCTCTGGTTGCTGCATTTCTTTTGAGTCAACGGTTT GGCTGCACTCTTCATATAAAGTTATTTTGTCATTATCCACTATGATTTCC TATATATGCTTCACTGGTACGCTGTACTTATTCGCGTCCCGTCCGCTTGA AATTGTACCCCGGACCTAGTATGGTTGAAATTTGGGAAAAGCACGAGGTT TAGACAGGGAGGTAAAACATTTTTTTTCAAAACATGAGCAGAGAATAGCT TGTACAAGGTCCACCAGCACGATAGCCATGCAGGTATAGACAATATTATT TGTATGGGTTTTTGAATACAAGCCAACTGAATAAGTGATTGCCACAGTAT AGTGAGTAGTTAAGGCGAAAATGAGTCCATCGCAGTCTCCTTTTGCTCGC CATCGCCCCGAGCGTTCAAAGGTAATTTTTTTTAGACCTAGCGCGGGCAT TTTACCATAGCCCATGTCCCCGAGTGCTTTCAAGAGGTGGATTTGCGACC TGTAGCGACACAACAGCTGCGACATGGTCGGTGTGTGTTTTATTGGCCTG TAATTGTCTCTGTGCAGCTGTGTATGTGTGTCGGGTTTACGTGTTGCGAT TCACGGACCCTGAGCTGCAACAATTAGAGTCAGGGAAAGGTTTCATTTCC TTGCTTACCACCATGAGTTCGTTTGTCAGGATCCCCACTCAGGGGGAAAA TTAAGGGAAAATATTGTGTATTACACTCAATACCTGACCTTGAGTAGAAC CCTGGGCCCTTTCTTTTTGCTGAAACTCTGTAATATTCAAATAAAATCAC CACCTTTCAGTGATCTGATAAATATGACTTGTTCCGATTGTGTTGGTAAC TTGAATATAATTTGGTCATCCCATGAAGGGTCCTGCATGGTTTAGGATGG AGCTTGTCCCGATTTCAGATGCACCTCGTTGAAAAGCTTGTCTGAATCAT GAATCCGTTGCCCTCGTAAACCCTTTTCTCCCCCGCTGGCAGGGGTGCGT TGCGAGCAGAGCGAAAAGAGCTACTGACGGTCGTATTGCCACAAAGCTTG GAGAAGCAGAGCGAGGGATCAAGGGAATTAATTCAAAAGGTAAGGGTGCT AACCTGACAGCGGATGATGTACTTTAGAGCCACGGCTTCTGCTGTTTTTG GTAGTACTTTTGGCTGTTCCGAATGGTCGAGAATTAAAGAAACAAGGTGT ATGAGCCTGATTCCTCAGACCCGTGGGCGCAGGGTAAGTGGCGACCCGTG GTATCCAGTGTTTTATCATGGCAACTCAGCGTTCGCTTGGTGTGTGCTTG ACTATGGTGTGTACGTCCGGTGTTGCGGCAAGTCAGATCCCAAATAACCA CACCATGAGATGTTGCCGTTCATCTGTTGCGGCAAGTCAGATCCTAAATA ACCACACCATGAGATGTTGCCGTTCATCTGTTGCGGCTAGGCAACTCGAA ACTGTATTCGTTTCCTATTTCTCGTTGTAACATGTCATTTTCTTTTGGGT ACTGTGCTATCGCTAGGTTAACCCCTGGACCCTAGTGTGCTGTGGCGGAA AACGAAGAAATAACACGAACCCGCCGCATACGAGCAAACCACGTCTGCGC AGTGTTGCATTACACTACGTTGACCCGAAGCAATTAATGTGCTACAGGAG TTTATCCCGCCAACAAATTGCCCCCCTCCCCCCCCCTCCTGCCCCCCCGG TGTAAGGTAACGAACGTGATCACGAACCCTCAAAATGACCACCTGCCACT CGACGCGGCCTCTCGTCTGTGCAACTCCGACTTGCTCAAGCGCACTGAGC AATTGATTTGCTTCGCCTTTCATGACTCGCACACGATTATCGAAACGTCC AAAGAGGCGAGATCGGCCAACATGATCGTAACAGAACTTTACCTAGACTA ACTTTAGCCGGCACAGGGAGGGACTGAAGCCGGCGATGGGGAGCGGGCGG TGGCATAGCGCGCGGGCGCGCACGTGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig893:17068..25596-

>mRNA_H-paniculata_contig893.16801.1 ID=mRNA_H-paniculata_contig893.16801.1|Name=mRNA_H-paniculata_contig893.16801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2130bp|location=Sequence derived from alignment at H-paniculata_contig893:17068..25596- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGTGCTCAGCACCGCTCGTGTCCTTGGTGGCGCTAATTCAATTTCC
AAATTCATCAGCTTTTCTCATCTCACAGCACTACAGTCACTATCTCATTC
CGACGTTGCGCTCTACCGCTCGCCAACAAGCAACAATGCGCAAATGTTCT
TCGGGGGCAGCGGCGGTAGCCATTTTACACAAGTCTCAATCCAGCGACCG
ATTTCCGCGTGATCGCTTACGGAATCGTAGCAGCGACGTAGGGCGTGCGA
GCATGAGCTCCGCGGGGGCGGACGGGGCCGACCCTGCCGCGTCTGTGCCA
TCGAGATCAGGTGACGCTGACATTTTCATCCAGGTTACAGCAGCGCGCAA
CGTGCAGTCCTCCGGTAGCGTAGATAAAGTTGATGCTGGTGCTACCGCCG
CTATGGGGGATGATTCTGCGGTTTTGGTCGGGCCAGCGAGGGAGCTCCTT
GGCGGGATGGCGTGGACGGATAAGCGAAGAGAAGGGGCGATGTCTAGCAC
GTCGAGCGCGCCCGCGCGAACGGAGATTCCGACAGACGTGGCGGTGGTTG
GGGCTCCGCAACAGATGCGGTGCTCAGCACCGCTCGTGTCCTTGGTGGCG
CTAATTCAATTTCCAAATTCATCAGCTTTTCTCATCTCACAGCACTACAG
TCACTATCTCATTCCGACGTTGCGCTCTACCGCTCGCCAACAAGCAACAA
TGCGCAAATGTTCTTCGGGGGCAGCGGCGGTAGCCATTTTACACAAGTCT
CAATCCAGCGACCGATTTCCGCGTGATCGCTTACGGAATCGTAGCAGCGA
CGTAGGGCGTGCGAGCATGAGCTCCGCGGGGGCGGACGGGGCCGACCCTG
CCGCGTCTGTGCCATCGAGATCAGGTGACGCTGACATTTTCATCCAGGTT
ACAGCAGCGCGCAACGTGCAGTCCTCCGGTAGCGTAGATAAAGTTGATGC
TGGTGCTACCGCCGCTATGGGGGATGATTCTGCGGTTTTGGTCGGGCCAG
CGAGGGAGCTCCTTGGCGGGATGGCGTGGACGGATAAGCGAAGAGAAGGG
GCGATGTCTAGCACGTCGAGCGCGCCCGCGCGAACGGAGATTCCGACAGA
CGTGGCGGTGGTTGGGGCTCCGCAACAGGTAGTGGAGAAGGAATATTCTA
TAGAGGCGATTCTCAAGGAGCTTGCGGAGATTCAAAACCAGGGGCCGAAG
AACTACTGTGTCTTGGGCACAAGGCACTGTTCCTTCTTGCACCAGCAGGT
AGTGGAGAAGGAATATTCTATAGAGGCGATTCTCAAGGAGCTTGCGGAGA
TTCAAAACCAGGGGCCGAAGAACTACTGTGTCTTGGGCACAAGGCACTGT
TCCTTCTTGCACCAGCAGATCATCGAGCTACTGGCGTACGCGTTGGTGCT
AAGTGGGAACCACGTCTTCACTTCTGGGGCAATGGGAACTAATGCTGCGA
CAATCAGATCATCGAGCTACTGGCGTACGCGTTGGTGCTAAGTGGGAACC
ACGTCTTCACTTCTGGGGCAATGGGAACTAATGCTGCGACAATCAGGGGT
GCGTTGCGAGCAGAGCGAAAAGAGCTACTGACGGTCGTATTGCCACAAAG
CTTGGAGAAGCAGAGCGAGGGATCAAGGGAATTAATTCAAAAGGGGTGCG
TTGCGAGCAGAGCGAAAAGAGCTACTGACGGTCGTATTGCCACAAAGCTT
GGAGAAGCAGAGCGAGGGATCAAGGGAATTAATTCAAAAGGTAACGAACG
TGATCACGAACCCTCAAAATGACCACCTGCCACTCGACGCGGCCTCTCGT
CTGTGCAACTCCGACTTGCTCAAGCGCACTGAGCAATTGATTTGCTTCGC
CTTTCATGACTCGCACACGATTATCGAAACGTCCAAAGAGGCGAGATCGG
CCAACATGATCGTAACAGAACTTTACCTAGACTAAGTAACGAACGTGATC
ACGAACCCTCAAAATGACCACCTGCCACTCGACGCGGCCTCTCGTCTGTG
CAACTCCGACTTGCTCAAGCGCACTGAGCAATTGATTTGCTTCGCCTTTC
ATGACTCGCACACGATTATCGAAACGTCCAAAGAGGCGAGATCGGCCAAC
ATGATCGTAACAGAACTTTACCTAGACTAA
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