mRNA_H-paniculata_contig893.16801.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: D8LKY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY0_ECTSI) HSP 1 Score: 347 bits (890), Expect = 1.180e-113 Identity = 180/195 (92.31%), Postives = 186/195 (95.38%), Query Frame = 3
Query: 822 REGAMSSTSSAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
R+ ++SS S+APARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKN CVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQS SRELIQKVTNV+TNP NDHLPLDAASRLCNSDLL RTEQLICFAFHDS TIIET+KEARS NMIVTELYLD
Sbjct: 122 RQPSLSSQSAAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSAASRELIQKVTNVVTNPVNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 316
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A835ZAP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP1_9STRA) HSP 1 Score: 293 bits (750), Expect = 3.130e-94 Identity = 150/188 (79.79%), Postives = 165/188 (87.77%), Query Frame = 3
Query: 843 TSSAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
+S P +IPT VAVVG PQ VEKEYSI+ ILKELAEIQ QGPKNYC+LGTRHCSFLHQQIIELLAYALVLSGNHVFTSGA GTNAATIRGALRAER +LLTVVLPQSL KQS+ S+EL+ +V NVI PQNDHLPLD ASRLCNSDLL R +QLICFAFHDSHTIIET++EAR+ +MIVTEL+LD
Sbjct: 9 SSPQPTTVKIPTKVAVVGRPQIRVEKEYSIDTILKELAEIQRQGPKNYCILGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAGGTNAATIRGALRAERPDLLTVVLPQSLAKQSDESQELLTQVQNVIDAPQNDHLPLDVASRLCNSDLLSRADQLICFAFHDSHTIIETAREARALDMIVTELFLD 196
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A6V2EYW5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EYW5_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.110e-73 Identity = 123/173 (71.10%), Postives = 148/173 (85.55%), Query Frame = 3
Query: 891 VGAPQQ-VVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
VG PQ+ V+EKE S+ +ILKELA IQ QGP+ YCVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ++ S+EL++ VT+++T PQND + LD ASR+CNS LL +T+QLI FAFH+S T+IE SKEA+ +M+VT LYLD
Sbjct: 104 VGDPQKLVIEKEMSVTSILKELAAIQAQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLNKQTKESQELLKDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 276
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A7R9YDI6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDI6_9STRA) HSP 1 Score: 240 bits (612), Expect = 5.610e-73 Identity = 126/180 (70.00%), Postives = 145/180 (80.56%), Query Frame = 3
Query: 870 IPTDVAVVGAPQQVVE-KEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
IP V +VG PQ V K Y+I++ILKELA IQ QGPK+YC+LGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGALRA +LLTVVLPQS+ KQ S++L+ KV NV+ QND L LD ASRLCNSDLL R EQLI FAFH+S T+IE +KEA+S +M+VT LYLD
Sbjct: 62 IPDVVPIVGEPQAVFTGKNYTIDSILKELAAIQQQGPKSYCILGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTNAAAIRGALRAGAPDLLTVVLPQSISKQPAESQKLLAKVKNVVEMSQNDGLGLDMASRLCNSDLLSRAEQLIAFAFHNSRTVIEATKEAQSRDMVVTVLYLD 241
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A7S2XNC9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNC9_9STRA) HSP 1 Score: 240 bits (612), Expect = 4.150e-72 Identity = 123/175 (70.29%), Postives = 150/175 (85.71%), Query Frame = 3
Query: 888 VVGAPQQ--VVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
+VG PQ+ V EKE+S+ AILKELA IQ QGP+ YCVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAER +LLTVV+PQSL KQ++ S+EL++ VT++IT PQND + LD ASR+CNS LL +++QLI FAFH+S T+IE +KEA+ +M+VT LYLD
Sbjct: 130 LVGDPQRKMVKEKEWSVSAILKELAAIQQQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAERPDLLTVVVPQSLGKQAKESQELLKDVTDLITMPQNDDMSLDVASRICNSYLLSQSDQLISFAFHESTTVIEATKEAKELDMLVTTLYLD 304
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A7R9WLF4_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLF4_9STRA) HSP 1 Score: 240 bits (613), Expect = 5.280e-72 Identity = 124/183 (67.76%), Postives = 153/183 (83.61%), Query Frame = 3
Query: 861 RTEIPTDVAVVGAPQ-QVVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
R E+ + A VG PQ +V EKE S+ ILKELA IQ QGP+ YC+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAER++LLTVVLPQSLEKQ + S+EL++KV ++I PQND + LD ASR+CNS LL +T+QLI FAFH+S T+IE +KEA++ +M+VT L+LD
Sbjct: 141 RLELQRETANVGKPQLRVKEKEQSVTDILKELAAIQQQGPQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAEREDLLTVVLPQSLEKQPKESQELLEKVDDLIEMPQNDGMSLDVASRICNSYLLSQTDQLISFAFHESTTVIEATKEAKTLDMLVTTLFLD 323
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A7S2I159_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I159_9STRA) HSP 1 Score: 239 bits (611), Expect = 9.270e-72 Identity = 121/173 (69.94%), Postives = 148/173 (85.55%), Query Frame = 3
Query: 891 VGAPQQVVEKE-YSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
VG PQ+++EK+ S+ +ILKELA IQ QGP+ YCVLGTRHCSFLHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ++ S+EL++ VT+++T PQND + LD ASR+CNS LL +T+QLI FAFH+S T+IE SKEA+ +M+VT LYLD
Sbjct: 147 VGDPQKLLEKKSMSVTSILKELAAIQAQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLHKQTKESQELLKDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 319
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A7S2SV08_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV08_9STRA) HSP 1 Score: 237 bits (604), Expect = 2.690e-71 Identity = 121/195 (62.05%), Postives = 153/195 (78.46%), Query Frame = 3
Query: 834 MSSTSSAPARTEIPTD----VAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
M+ST P +++ PT V +VG PQ+ +++ YS+E ILKELA IQ GP+ YC+LGTRHCSFLHQQIIELL+YALVL+GNH++TSG+ GTNAA IRGALR ER ELLTV+LPQSL KQ S+EL+++V NV+ N +ND L LD ASRLCNS LL +QLI FAFHDS+T+IE S+EA+ +++VT LYLD
Sbjct: 83 MASTGGNPLQSQ-PTSSRPPVPIVGEPQRKLDQSYSLEQILKELAAIQQTGPRKYCILGTRHCSFLHQQIIELLSYALVLTGNHIYTSGSQGTNAAAIRGALRGERPELLTVILPQSLTKQPLESQELLKQVKNVVENSKNDDLSLDVASRLCNSKLLVSADQLIAFAFHDSYTVIEASREAQDLDIVVTTLYLD 276
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A1E7FA35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FA35_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.200e-70 Identity = 113/164 (68.90%), Postives = 141/164 (85.98%), Query Frame = 3
Query: 915 EKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
E++YS+ ILKELA IQ QGP+ Y +LGTRHCS+LHQQIIELLAYALVLSGNHVFTSGA GT+AA +RGALRAER++LLTVVLPQS+ KQ++ S+EL+ KV +VIT PQND + LD ASR+CNS +L T+QLI FAFH+S+T++E SKEA++ +M+VT LYLD
Sbjct: 1 ERDYSVTNILKELAAIQQQGPQKYSILGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAGGTHAAAVRGALRAEREDLLTVVLPQSMSKQTKESQELLDKVDDVITMPQNDDMSLDVASRICNSYILSLTDQLISFAFHESNTVVEASKEAKALDMLVTTLYLD 164
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Match: A0A448ZCS9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCS9_9STRA) HSP 1 Score: 237 bits (604), Expect = 2.290e-70 Identity = 121/173 (69.94%), Postives = 145/173 (83.82%), Query Frame = 3
Query: 891 VGAPQ-QVVEKEYSIEAILKELAEIQNQGPKNYCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSEGSRELIQKVTNVITNPQNDHLPLDAASRLCNSDLLKRTEQLICFAFHDSHTIIETSKEARSANMIVTELYLD 1406
VG PQ +V K+ S+ ILKELA IQ QGP+ YC+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GTNAAT+RGALRAER++LLTVVLPQSL KQ+ S+EL++KV ++IT PQND L LD ASR+CNS LL T+QL+ FAFH+S T+IE SKEA+ +M+VT LYLD
Sbjct: 174 VGDPQLRVKVKDKSVTDILKELAAIQQQGPQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAPGTNAATVRGALRAEREDLLTVVLPQSLSKQTSESQELLKKVDDLITMPQNDELSLDVASRICNSYLLSLTDQLVSFAFHESTTVIEASKEAKKLDMLVTTLYLD 346 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig893.16801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig893.16801.1 >prot_H-paniculata_contig893.16801.1 ID=prot_H-paniculata_contig893.16801.1|Name=mRNA_H-paniculata_contig893.16801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp MRCSAPLVSLVALIQFPNSSAFLISQHYSHYLIPTLRSTARQQATMRKCSback to top mRNA from alignment at H-paniculata_contig893:17068..25596- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig893.16801.1 ID=mRNA_H-paniculata_contig893.16801.1|Name=mRNA_H-paniculata_contig893.16801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8529bp|location=Sequence derived from alignment at H-paniculata_contig893:17068..25596- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig893:17068..25596- >mRNA_H-paniculata_contig893.16801.1 ID=mRNA_H-paniculata_contig893.16801.1|Name=mRNA_H-paniculata_contig893.16801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2130bp|location=Sequence derived from alignment at H-paniculata_contig893:17068..25596- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |