mRNA_H-paniculata_contig8910.16791.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Match: A0A6H5J883_9PHAE (GT20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J883_9PHAE) HSP 1 Score: 400 bits (1029), Expect = 2.320e-130 Identity = 194/214 (90.65%), Postives = 199/214 (92.99%), Query Frame = 3
Query: 552 YVTVHTASFWAKSFMQEFREVCDGQRESTRKLPTLPVKEVLAAYKNARNRLIISDYDGTLTTLQSLPQLASPPPVVTTLLDSLCRDPKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEAEQWQCIGQDLDLSWKDVVRPIMQYFTERTPGTYIENKD--LTWHYRDADPHFGLWQAKDMQIQMEDVLSNLPLEILQGNRMVEVRHQV 1187
YV VHTA+FWAKSFM EFREVCDGQ+ESTRKLPTLP+KEVL AYK A+NRLIISDYDGTLTTLQSLPQLA PP VVT LDSLCRD KNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEA QWQC GQDLDLSWKDVVRPIMQYFTERTPGTYIENK+ LTWHYRDADPHFGLWQAKDMQI MEDVL NLPLEILQGNRMVEVRHQV
Sbjct: 351 YVVVHTAAFWAKSFMHEFREVCDGQQESTRKLPTLPIKEVLEAYKKAKNRLIISDYDGTLTTLQSLPQLAGPPAVVTNFLDSLCRDYKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEATQWQCSGQDLDLSWKDVVRPIMQYFTERTPGTYIENKESSLTWHYRDADPHFGLWQAKDMQIHMEDVLHNLPLEILQGNRMVEVRHQV 564
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Match: D8LRB5_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB5_ECTSI) HSP 1 Score: 401 bits (1030), Expect = 6.940e-128 Identity = 194/213 (91.08%), Postives = 199/213 (93.43%), Query Frame = 3
Query: 552 YVTVHTASFWAKSFMQEFREVCDGQRESTRKLPTLPVKEVLAAYKNARNRLIISDYDGTLTTLQSLPQLASPPPVVTTLLDSLCRDPKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEAEQWQCIGQDLDLSWKDVVRPIMQYFTERTPGTYIENKD--LTWHYRDADPHFGLWQAKDMQIQMEDVLSNLPLEILQGNRMVEVRHQ 1184
YV VHTA+FWAKSFM EFREVCDGQ+ESTRKLPTLP+KEVL AYK A+NRLIISDYDGTLTTLQSLPQLA PP VVT LDSLCRD KNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEA QWQC GQDLDLSWKDVVRPIMQYFTERTPGTYIENK+ LTWHYRDADPHFGLWQAKDMQI MEDVLSNLPLEILQGNRMVEVRHQ
Sbjct: 534 YVVVHTAAFWAKSFMHEFREVCDGQQESTRKLPTLPIKEVLEAYKKAKNRLIISDYDGTLTTLQSLPQLAGPPAVVTNFLDSLCRDYKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEATQWQCSGQDLDLSWKDVVRPIMQYFTERTPGTYIENKESSLTWHYRDADPHFGLWQAKDMQIHMEDVLSNLPLEILQGNRMVEVRHQ 746
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Match: A0A835Z8I3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8I3_9STRA) HSP 1 Score: 361 bits (926), Expect = 3.190e-114 Identity = 171/213 (80.28%), Postives = 186/213 (87.32%), Query Frame = 3
Query: 552 YVTVHTASFWAKSFMQEFREVCDGQRESTRKLPTLPVKEVLAAYKNARNRLIISDYDGTLTTLQSLPQLASPPPVVTTLLDSLCRDPKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEAEQWQCIGQDLDLSWKDVVRPIMQYFTERTPGTYIENKD--LTWHYRDADPHFGLWQAKDMQIQMEDVLSNLPLEILQGNRMVEVRHQ 1184
YV++HTA FWAKSFMQEFREVCD +++ KLPTLP+KEV AY A+ RLIISDYDGTLT LQSLPQLA PPP VT+LL++LCRDPKN LFIISGRERRFMD W G LR GLAAEYGFYYRLP +QWQC GQ LDL+WK+VV PIMQYFTERTPGTYIENK+ LTWHYRDADPHFGLWQAKDMQI MED LSN+PLEILQGNRMVEVRHQ
Sbjct: 465 YVSMHTACFWAKSFMQEFREVCDKRKKGIDKLPTLPIKEVRHAYAEAKRRLIISDYDGTLTQLQSLPQLAGPPPFVTSLLENLCRDPKNTLFIISGRERRFMDRWFGNLRVGLAAEYGFYYRLPNQDQWQCAGQGLDLTWKNVVHPIMQYFTERTPGTYIENKESSLTWHYRDADPHFGLWQAKDMQINMEDSLSNMPLEILQGNRMVEVRHQ 677
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Match: K8YXH8_NANGC (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YXH8_NANGC) HSP 1 Score: 313 bits (803), Expect = 1.230e-94 Identity = 148/215 (68.84%), Postives = 179/215 (83.26%), Query Frame = 3
Query: 546 SWYVTVHTASFWAKSFMQEFREVCDGQRESTRKLPTLPVKEVLAAYKNARNRLIISDYDGTLTTLQSLPQLASPPPVVTTLLDSLCRDPKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEAEQWQCIGQDLDLSWKDVVRPIMQYFTERTPGTYIENKD--LTWHYRDADPHFGLWQAKDMQIQMEDVLSNLPLEILQGNRMVEVRHQ 1184
S YV+V+TAS WAKSF+ E R VC + + KLP LP +AY+ ARNRLI++DYDGTLT LQS+PQLA+P P +T LLDSL +DP+N + I+SGRE+RFMDTWLGKL+ LAAEYGFYYR+PE E+WQ + ++D SW+D+VRPI++YFTERTPGTYIE K+ LTWHYRDADP+FG WQAKDMQIQ+EDVLSNLPLEI+QGNRMVEVRHQ
Sbjct: 505 SRYVSVNTASSWAKSFVAELRTVC-ANKPNLSKLPRLPFDLARSAYERARNRLIVADYDGTLTQLQSVPQLATPSPYITNLLDSLSKDPRNTVVIVSGREKRFMDTWLGKLKMALAAEYGFYYRMPEEEEWQTMAPEVDTSWRDIVRPILEYFTERTPGTYIEKKESSLTWHYRDADPNFGSWQAKDMQIQLEDVLSNLPLEIIQGNRMVEVRHQ 718
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Match: A0A7S1UK50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK50_9STRA) HSP 1 Score: 301 bits (772), Expect = 1.780e-92 Identity = 144/213 (67.61%), Postives = 174/213 (81.69%), Query Frame = 3
Query: 552 YVTVHTASFWAKSFMQEFREVCDGQRESTRKLPTLPVKEVLAAYKNARNRLIISDYDGTLTTLQSLPQLASPPPVVTTLLDSLCRDPKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEAEQWQCIGQDLDLSWKDVVRPIMQYFTERTPGTYIENKD--LTWHYRDADPHFGLWQAKDMQIQMEDVLSNLPLEILQGNRMVEVRHQ 1184
YV +HTAS+WA+S + +F E+C + T LP L +VL AY++A+ RLIISDYDGTLTTLQSLPQLA+P +T++LD + RDPKN L IISGRERRFMDTWLG+LR GLAAE+G YYRLP WQ + D+D++WK VVRPIM+YF ERTPGTYIE+KD LTWHYRDADPHFG WQAKDMQ+ MEDVL+NLPLEILQGN+++EVRH+
Sbjct: 323 YVKLHTASYWARSLLSDFVEICQTKPHKTG-LPLLQKDDVLEAYRSAKKRLIISDYDGTLTTLQSLPQLATPSHTITSILDVIARDPKNTLLIISGRERRFMDTWLGRLRVGLAAEHGSYYRLPWDVDWQTLCSDVDVTWKKVVRPIMEYFEERTPGTYIEDKDSSLTWHYRDADPHFGSWQAKDMQMHMEDVLTNLPLEILQGNKVLEVRHR 534
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Match: A0A8J2S9Z6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9Z6_9STRA) HSP 1 Score: 301 bits (771), Expect = 9.790e-91 Identity = 140/212 (66.04%), Postives = 174/212 (82.08%), Query Frame = 3
Query: 552 YVTVHTASFWAKSFMQEFREVCDGQRESTRKLPTLPVKEVLAAYKNARNRLIISDYDGTLTTLQSLPQLASPPPVVTTLLDSLCRDPKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEAEQWQCIGQDLDLSWKDVVRPIMQYFTERTPGTYIENKD--LTWHYRDADPHFGLWQAKDMQIQMEDVLSNLPLEILQGNRMVEVRH 1181
YV+ +TAS+WA+SF+ EFR+VC+ KLP LP VL AY+ A RL+++DYDGTLT +QSLP+LA+P PVVT LL +L RDP+N ++++SGRERRFM+ WLG+L+ GLAAE+GF +R P +E+W +G+DLD SWKDVVRPIMQYF ERTPGTYIE+K+ L WHYRDADPHFG WQAKDMQI MEDV+S LPLEI+QGNR+VEVRH
Sbjct: 559 YVSTNTASYWARSFVDEFRDVCE-HPPLLPKLPKLPAGRVLQAYQRASRRLVVTDYDGTLTQMQSLPRLATPAPVVTQLLATLSRDPRNTVYVVSGRERRFMEKWLGRLKVGLAAEFGFCHRAPGSEEWTSLGRDLDTSWKDVVRPIMQYFAERTPGTYIESKESSLAWHYRDADPHFGAWQAKDMQIHMEDVMSTLPLEIIQGNRLVEVRH 769
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Match: F0Y2I9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2I9_AURAN) HSP 1 Score: 282 bits (722), Expect = 4.940e-84 Identity = 138/220 (62.73%), Postives = 171/220 (77.73%), Query Frame = 3
Query: 552 YVTVHTASFWAKSFMQEFREVCDGQRESTRKLPTLPVKEVLAAYKNARN------RLIISDYDGTLTTLQSLPQLASPPPVVTTLLDSLCRDPKNRLFIISGRERRFMDTWLGKLRAGLAAEYGFYYRLPEAEQ--WQCIGQDLDLSWKDVVRPIMQYFTERTPGTYIENKD--LTWHYRDADPHFGLWQAKDMQIQMEDVLSNLPLEILQGNRMVEVRH 1181
YVT +TAS+WA+SF+ EFR+VC+ KLP L E + + RL+++DYDGTLT +QSLPQLA+P PVVT LL +L RD +N ++++SGRERRFMD WLGKL+ GLAAE+G+ +R P+ EQ W+ +G++LD SWKDVVRPIMQYF ERTPGTYIE+K+ L WHYRDADPHFG WQAKDMQI MEDV+SNLPLEI+QGNR+VEVRH
Sbjct: 507 YVTTNTASYWARSFVSEFRDVCE-HPPLLSKLPKLNAAEFRSLVGTPQTSGRIPRRLVVTDYDGTLTQIQSLPQLATPAPVVTQLLATLARDTRNTVYVMSGRERRFMDKWLGKLKVGLAAEFGYCHRAPDDEQGVWKSLGRELDTSWKDVVRPIMQYFAERTPGTYIESKESSLAWHYRDADPHFGAWQAKDMQIHMEDVMSNLPLEIIQGNRLVEVRH 725
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Match: H3G924_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G924_PHYRM) HSP 1 Score: 215 bits (548), Expect = 1.720e-61 Identity = 112/181 (61.88%), Postives = 135/181 (74.59%), Query Frame = 1
Query: 1 QLLGLELFLNRYPEWRGKVTLIQVGVPSRTEVAEYRDLGAQVNELVGRINGNHGTLEYSPVHYINQSISQDELFAIYNVADVCLVTSVRDGMNLVSHEYVAAQSEPRQPVVAGTWAPVLERSDGPGVLILSEFAGSAQSLSGAIRVNPWNTEELANAMHQALTLSRVERELRQHKLYR*IR 543
+LL +E FL+ YPE V LIQ+GVPSRT V EY+ L A VNE+VGRING GTL +SPVHYI++S++ EL A+YN+ADVCLVTS+RDGMNLVSHEYV QS+ +P +GPGVLILSEFAGSAQSLSGAIRVNPWNT ++ANA+ AL L +ERE RQ LYR ++
Sbjct: 286 KLLAMERFLSLYPERCKNVVLIQIGVPSRTGVQEYQHLAASVNEMVGRINGRFGTLTHSPVHYIHRSVAPSELVALYNLADVCLVTSIRDGMNLVSHEYVMCQSQSCEP-----------HREGPGVLILSEFAGSAQSLSGAIRVNPWNTTDMANALGYALELPLMEREYRQTNLYRYVK 455
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Match: K3W821_GLOUD (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W821_GLOUD) HSP 1 Score: 218 bits (556), Expect = 9.920e-60 Identity = 111/181 (61.33%), Postives = 138/181 (76.24%), Query Frame = 1
Query: 1 QLLGLELFLNRYPEWRGKVTLIQVGVPSRTEVAEYRDLGAQVNELVGRINGNHGTLEYSPVHYINQSISQDELFAIYNVADVCLVTSVRDGMNLVSHEYVAAQSEPRQPVVAGTWAPVLERSDGPGVLILSEFAGSAQSLSGAIRVNPWNTEELANAMHQALTLSRVERELRQHKLYR*IR 543
++L +E FL++YPE R V LIQ+ VPSRT V EY+ L A VNE+VGRING GTL+++PVHYI+QS++ EL A+YNVADVCLVTS+RDGMNLVS+EYV QS+P + R +GPGVLILSEFAGSAQSLSGAIRVNPWN ++ANA+ ALTL +ERE RQ L+R ++
Sbjct: 416 RMLAMERFLSKYPERRESVVLIQIAVPSRTGVEEYQQLAASVNEMVGRINGRFGTLQHTPVHYIHQSVTPTELVALYNVADVCLVTSLRDGMNLVSYEYVMCQSKPCEG-----------RREGPGVLILSEFAGSAQSLSGAIRVNPWNNTDMANALEYALTLPAIEREYRQSNLHRYVK 585
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Match: A0A662XFL2_9STRA (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XFL2_9STRA) HSP 1 Score: 218 bits (556), Expect = 1.830e-59 Identity = 113/181 (62.43%), Postives = 134/181 (74.03%), Query Frame = 1
Query: 1 QLLGLELFLNRYPEWRGKVTLIQVGVPSRTEVAEYRDLGAQVNELVGRINGNHGTLEYSPVHYINQSISQDELFAIYNVADVCLVTSVRDGMNLVSHEYVAAQSEPRQPVVAGTWAPVLERSDGPGVLILSEFAGSAQSLSGAIRVNPWNTEELANAMHQALTLSRVERELRQHKLYR*IR 543
+LL +E FL YPE R V LIQ+ VPSRT V EY+ L VNE+VGRING GTL +SPVHYI++S++ EL A+YN+ADVCLVTS+RDGMNLVSHEYV QS P +P R +GPGVLILSEFAGSAQSLSGAIRVNPWNT ++ANA+ AL L +ERE RQ LYR ++
Sbjct: 520 KLLAMERFLAMYPERRQDVILIQIAVPSRTGVEEYQHLAGSVNEMVGRINGRFGTLTHSPVHYIHRSVAPSELVALYNMADVCLVTSIRDGMNLVSHEYVMCQSRPCEP-----------RREGPGVLILSEFAGSAQSLSGAIRVNPWNTSDMANALSYALALPLMEREYRQTNLYRYVK 689 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8910.16791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8910.16791.1 >prot_H-paniculata_contig8910.16791.1 ID=prot_H-paniculata_contig8910.16791.1|Name=mRNA_H-paniculata_contig8910.16791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp MQEFREVCDGQRESTRKLPTLPVKEVLAAYKNARNRLIISDYDGTLTTLQback to top mRNA from alignment at H-paniculata_contig8910:845..9517+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8910.16791.1 ID=mRNA_H-paniculata_contig8910.16791.1|Name=mRNA_H-paniculata_contig8910.16791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8673bp|location=Sequence derived from alignment at H-paniculata_contig8910:845..9517+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8910:845..9517+ >mRNA_H-paniculata_contig8910.16791.1 ID=mRNA_H-paniculata_contig8910.16791.1|Name=mRNA_H-paniculata_contig8910.16791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1194bp|location=Sequence derived from alignment at H-paniculata_contig8910:845..9517+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |