mRNA_H-paniculata_contig891.16790.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 462 bits (1188), Expect = 3.470e-132 Identity = 320/787 (40.66%), Postives = 430/787 (54.64%), Query Frame = 2
Query: 3869 DYRLMVLSRLLEMDANVDEDHLQKLSRNRSVGWLKECLVGAVASARNPLIPGMTLSSILVKVACKSPEGDRKKLSEVQEGVDDLLLELFERLPQTVRGFDQGMSDCCVLLEPKTNPETTGADLETQGPLTTALNNREQLQTFCTIALLVDYLSHKFHRGLPELRDSGHILDDEAILQNLYLGDVGKVR-GHSHVRLG----------SLDGVGL----DVFGERNLNVDVHSLWSLLVASVTGTTKLLPNRGPFPEVQKLPGLTMLPGAQFIAAVVASNPVRYYRVPSLRMALDLFAYLVMLVVFSVSVLLHKEGALTSWEIGFAVYIAGAAWTEIQEMKLDIITYVKDRWNILDILALTLLAAGFLVRATDGDNPWGRALYALSAPLLFSRLVFFAQLLHFQGPMVQVLFGMARELFQFSMVMLVVILGFAMAFYALVRETDDVFGETYGETWLRVFKAMLGEVSIFEEAMDNNCKSTLEDDLADHDCNPYSPWITVLLVIYLIITSIMLLNLLVAVLTVQHQTVQENVDKEIKVSRIRVFEHYAGVVKNDTLPAPFNILQLAVSLPIGATASLLKNCWPTVGDLMDNGNFMYIAAKIAVGKLVFWPAMSVIVIVGGSLLWLCSLPSVILVVFTHVWRETEVETNFGRNPAKVGWKAAIWAFGSALLCTFLAPLFLFISWIWGILRGLSKVLRSCGGHRVDPNQTKAKDLGD-DPKAI---VEKWLGPLSVPLLREYVENPMSDPAVRQDERTRPTTVEHVKRLRTRLEQHIVQTVNANTDATIEQ 6172
D+ + LS LL+ D L +LSR RS WL+ C + VA + NP +PGMTLS K A +PEG+R+KL +QE VD LLLE+ ERLPQTV+GFD GM+ C + EP+ + E GPL AL R+ +QTFCT LL D+LS +F GLP LRD+ +IL D L NL G G++ G ++ L SLD L D G+ +D + L++ LL LT LPGAQF A + P +YYRVP++RM LDL YL MLV FS VL H++G LT E FA YI TE QEM+ D Y D WNILD+L L L+ G +VR DGDN WGRALYALSAPL+FSRL+FFAQ+L F GPM+QV+F M EL +F +V++VV+LGFAM+F+AL + D T+G T L +FKAMLGEV F N Y T L VIYL++ ++MLLNLL+AVL+ H V+ D+E KVS+ R+ EHY VV LP PFN++QL +SLP+ V D G A+ AVG++ FW A+ + G++LW+ S V TH + + + R VG + C APL+L W+ ++ L K+ C ++ +A + +PK++ +E G L L+ Y+E+P+ DP VR DER + TTVE++K+LR RLE+ I+ ++A D+ IEQ
Sbjct: 528 DWAIGALSCLLQYPTMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSAVFEPELSREDARG---LPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCI----LLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHEDGPLTPGEAAFAFYILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVD-----TFGGTCLTLFKAMLGEVDFF----------------GSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPV------------MVRDRSGQGTAST-RAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSKAQAR----RGALSVG-SLLVRYLIVFFWCVLGAPLYLMAFWLTAPMKWL-KLRPWCWVW----DRRQAPYIASWNPKSVNDLLEGNSGGLVAGDLQMYLEDPIGDPEVRPDERRKQTTVENIKQLRNRLEKTILTHLDAKLDS-IEQ 1262
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 389 bits (998), Expect = 1.040e-107 Identity = 288/831 (34.66%), Postives = 412/831 (49.58%), Query Frame = 2
Query: 3884 VLSRLLEMDANVDEDHLQKLSRNRSVGWL-KECLVGAVASARNPLIPGMTLSSILVKVACKSPEGDRKKLSEVQEGVDDLLLELFERLPQTVRGFDQ--GMSDCCVLLEPKTNPETTGADLETQGPLTTALNNREQLQTFCTIALLVDYLSHKFHRGLPELRDSGHILDDEAILQNLYLGDVGKVRGHSHVRLGSLDGVGLDVFGERNLNVDVHSLWSLLVASVTGTTKLLPNRGPFPEVQKLPGLTMLPGAQFIAAVVASNPVRYYRVPSLRMALDLFAYLVMLVVFSVSVLLHKEGALTSWEIGFA-------------VYIAGAAWTEIQEMKLDIITYVKDRWNILDILALTLLAAGFLVRATDGDNPWGRALYALSAPLLFSRLVFFAQLLHFQGPMVQVLFGMARELFQFSMVMLVVILGFAMAFYALVRETDDVFGETYGETWLRVFKAMLGEVSIFEEAMDNNCKSTLEDDLADHDCNPYSPWITVLLVIYLIITSIMLLNLLVAVLTVQHQTVQENVDKEIKVSRIRVFEHYAGVVKNDTLPAPFNILQLAVSLPIGATASLLKNCW-------------PTV--------GDLMDNGNFMYIAAKIAVGKLVFWPAMSVIVIVGGSLLWLCSLPSVILVVFT-HVWRETEVETN--FG------RNPAKVGWKAAIWAFGSA--------------------------------LLCTFLAPLFLFISWIWGILRGLS------KVLRSCGGHRVDPNQTKAKDLGDDP-KAIVEKWLGPLSVPLLREYVENPMSDPAVRQDERTRPTTVEHVKRLRTRLE 6121
+L L+ A L+ LSR + G + K C + AV SA NP IPG+TLS L + A ++ EG+R+ L E + +D++LLE+FERLPQTVRGF++ G C +LEP+ +G++ + GPL +++ QL+TFC + L++D+LS KF GLP+L D+ +L +E Q YL + G R G+GLD + V L +LL G P LT LPGAQFI A + + P +YY VP++RM LD Y+ M+ S VL H G A ++I A+ E +EMK I Y KD+WN+LD L + L G ++R D + WG A YALSAPL+ +R++FFAQ+L FQGPMVQV+F M L QF VMLVV++GF MA + + R+ +D +G+T L +FKAMLGE F+E Y P T+L+V+YL I ++MLLNLL+A+L+ +H VQEN KVS+ R+ HY VV ND LPAPFN++QL +SL G A C+ P + G++ + + A+ A G+LV+W + + + GG++LW L + H W T E + FG P + FGS LLC AP LF+ W+ +L G K+ D ++ K L +++++K + L E++E+PM+D VRQDE+ + TTVEH+K LR RLE
Sbjct: 493 MLFSLIANSARPSASELKGLSRKAASGDVFKRCCLRAVTSAANPFIPGVTLSIRLTEAAKQASEGERRALFETKSSIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSN-DLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEH--QLWYLEEDGLFRDEH--------GLGLD-------GIPVALLEALLKGVRQGIW------------DNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVED-----FGDTLLGLFKAMLGETGFFDEFSGGR----------------YDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSL--GVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILW--GLSGFFYAQYAWHSWLSTTDEQDCFFGFLLESDEEPDAEDMSKEVVMFGSCGSPLWRMLQGLGIVFRFLLEWIGVVLAWFLTFLLCILGAPCCLFLRWL--VLPGTEFFSWCWKLAACRSTQDPDEDEESPKRLSTPTIESMLKKGRSGVGAEKLLEFLEDPMNDKDVRQDEKEKKTTVEHIKLLRDRLE 1266
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 392 bits (1007), Expect = 5.660e-107 Identity = 286/812 (35.22%), Postives = 409/812 (50.37%), Query Frame = 2
Query: 3869 DYRLMVLSRLLEMDANVDEDHLQKLSRNRSVGWLKECLVGAVASARNPLIPGMTLSSILVKVACKSPEGDRKKLSEVQEGVDDLLLELFERLPQTVRGFDQGMSDCCVLLEPKTNPETTGADLETQGPLTTALNNREQLQTFCTIALLVDYLSHKFHRGLPELRDS-GHILDDEAILQNLYLGDVGKVRGHSHVRLGSLDGVGLDVFGERNLNVDVHSLWSLLVASVTGTTKLLPNRGPFPEVQKLPGLTMLPGAQFIAAVVASNPVRYYRVPSLRMALDLFAYLVMLVVFSVSVLLHKEGALTSW-EIGFAVYIAGAAWTEIQEMKLDIITYVKDRWNILDILALTLLAAGFLVRATDG-DNPWGRALYALSAPLLFSRLVFFAQLLHFQGPMVQVLFGMARELFQFSMVMLVVILGFAMAFYALVRETDDVFGETYGETWLRVFKAMLGEVSIFEEAMDNNCKSTLEDDLADHDCNPYSPWITVLLVIYLIITSIMLLNLLVAVLTVQHQTVQENVDKEIKVSRIRVFEHYAGVVKNDTLPAPFNILQLAVSLPIGATASLLKNCWPT----------------------VGDLMDNGN-------FMYIAAKIAVGKLVFWPAMSVIVIVGGSLLWLCSLPSVILVVFTHVWRETEVETNFGRNPAKVGWKAAIWAFGSALLCTFLAPLFLFISWIWGILRGLSKVLRSCGGH-------------------------RVDPNQTKAKDLGDDPKAIVEKWL----GPLSVPLLREYVENPMSDPAVRQDERTRPTTVEHVKRLRTRLE 6121
D RL VL+ LL+ A L +LS LKE L+GA++SA NP IPGM LS ++ EG++++L+ +Q VD+LLLE+ E +PQTV+GF M DC + EP+T QGPL L+ REQ++T+CTI L++D+++ KF +GLP LRD+ G +L ++ Q LY G GL G+ V L G L +T PGA+FI A S P YY+VP+LRM LDL Y+ M+++F V+LH+ G + W EI F +YI G TE +E+ D Y++D+WN+LD+ +LTLL G + R D+ RALYALSAPL F+R++FFAQ+L QGPM+QV+F M L +F M+ML+V+LGF +FY+L +ET YGE W +F+A LGE D L D + TVLLV+YL++ +IM+LNLLVAVL+ H V N E KV+R R+ +HY VV+ D LP PFN+ Q +LP +L C+ T NGN + A+ G+L FW + I ++ G +LW+ S+ +VV+ +T + + G A++ + A G AP + + W+ G + G+ + +R+ G R P A+ DD + +V L G L+ L+ ++++PMSDP VR+DE TR TTVEH+K LR RLE
Sbjct: 893 DARLSVLAYLLQQGAKPTNKGLLRLSNLVKFPRLKESLLGAISSANNPFIPGMNLSVACTTATRRAMEGEKRRLASMQAAVDELLLEVLEHMPQTVKGFKGEMRDCSAIFEPET---VISRFHGYQGPLHVVLSKREQMETYCTIPLVLDFMTRKFTKGLPSLRDTEGVLLSNKGFTQTLY-------------------GGGLLAEGK------VFFFGMALQRGYAGGA--------------LSSITYFPGARFIIAGFLSRPGSYYKVPALRMCLDLVTYISMMIIFGGFVILHEAGDTSDWLEIVFTMYIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMYGQVDDESSRALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETT-----AYGEVWKAIFRATLGET----------------DYLDDFSGTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFALPF----MVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMISIVKAPVVVW-----QTSGDKSLGGRIARMLLVIFVCAVG--------APFWHLVMWVRGGVAGVRRTMRALGCXXXXXXXXXXXXKRGDGRTTTASITARGSPATIVAEGAEDDMEKVVPIVLQEADGALTTSELQIFLDDPMSDPDVRRDEETRATTVEHIKLLRNRLE 1624
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE) HSP 1 Score: 387 bits (993), Expect = 5.470e-106 Identity = 290/833 (34.81%), Postives = 414/833 (49.70%), Query Frame = 2
Query: 3884 VLSRLLEMDANVDEDHLQKLSRNRSVGWL-KECLVGAVASARNPLIPGMTLSSILVKVACKSPEGDRKKLSEVQEGVDDLLLELFERLPQTVRGFDQ--GMSDCCVLLEPKTNPETTGADLETQGPLTTALNNREQLQTFCTIALLVDYLSHKFHRGLPELRDSGHILDDEAILQNLYLGDVGKVRGHSHVRLGSLDGVGLDVFGERNLNVDVHSLWSLLVASVTGTTKLLPNRGPFPEVQKLPGLTMLPGAQFIAAVVASNPVRYYRVPSLRMALDLFAYLVMLVVFSVSVLLHKEGALTSWEIGFA-------------VYIAGAAWTEIQEMKLDIITYVKDRWNILDILALTLLAAGFLVRATDGDNPWGRALYALSAPLLFSRLVFFAQLLHFQGPMVQVLFGMARELFQFSMVMLVVILGFAMAFYALVRETDDVFGETYGETWLRVFKAMLGEVSIFEEAMDNNCKSTLEDDLADHDCNPYSPWITVLLVIYLIITSIMLLNLLVAVLTVQHQTVQENVDKEIKVSRIRVFEHYAGVVKNDTLPAPFNILQLAVSLPI----------------------GATASLLKNCWPTVGDLMDNGNFMYIAAKIAVGKLVFWPAMSVIVIVGGSLLWLCSLPSVILVVFT-HVWRETEVETN--FG------RNPAKVGWKAAIWAFGSA--------------------------------LLCTFLAPLFLFISWIWGILRGLSKV-----LRSCGGHRVDPNQTKAKDLGDDPKAI---VEKWLGPLSVPLLREYVENPMSDPAVRQDERTRPTTVEHVKRLRTRLE 6121
+L L+ A L++LSR + G + K C + AV SA NP +PG+TLS L + A ++ EG+R+ L + + +D+LLLE+FERLPQTVRGF++ GM C +LEP+ TTG++ + GPL +++ QL+TFC + L++D+LS KF GLP+L D+ +L +E L YL + G R FG + V +LL A + G + + + P LT LPG QFI A + + P +YY VP++RM LD Y+ M+ V S VL H S G ++I A+ E +EMK I Y KD+WN+LD L + L G ++R D + WG A YALSAPL+ +R++FFAQ+L F GPMVQV+F M L QF VMLVV++GF MA + R+ D +G+T L +FKAMLGE IF+E Y P T+L+V+YL I ++MLLNLL+A+L+ +H V EN + KVS+ R+ HY VV ND LPAPFN++QL +SL + AT + W G++ + + +A+ A G+ V+W + + + GG++LW SL + + H W T E N FG P + + FGS LLC AP L + W+ IL G L +C + DP + K + I ++K L E++E+PM+D VRQDE+ R TTVEH+K LR RLE
Sbjct: 510 MLFSLIANSARPSASALKELSRKAASGDIFKRCCLRAVTSAANPFVPGVTLSIRLSEAAKQASEGERRALFDTKSSIDELLLEMFERLPQTVRGFEEQAGMDSCTNVLEPELMRATTGSN-DLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHHLW--YLEEDGLFRDEHG-------------FGSDGIPV------ALLAALLKGVRQGIWDNTPI--------LTFLPGTQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAVLSSFVLFHSTTESDSGLDGIVAHRLSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFHGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVAD-----FGDTLLGLFKAMLGETGIFDEFSGGR----------------YDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFW---GNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLW--SLSGLFYAQYACHSWLSTTDEQNSFFGFLQEGDEEPDEEDTAKDVVVFGSCGSPLWRMLQGVRIVFRSVLQWIGVVLAWFLIFLLCILGAPCCLVLRWL--ILPGTEFFSWCWKLAACRSTQ-DPGEDKKSPMRSSTPTIESMLKKGCCGAGAENLLEFLEDPMNDKDVRQDEKERKTTVEHIKLLRDRLE 1283
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE) HSP 1 Score: 369 bits (947), Expect = 2.570e-103 Identity = 287/799 (35.92%), Postives = 415/799 (51.94%), Query Frame = 2
Query: 3872 YRLMVLSRLLEMDANVDEDHLQKLSRNRSVGW-LKECLVGAVASARNPLIPGMTLSSILVKVACKSPEGDRKKLSEVQEGVDDLLLELFERLPQTVRGFDQGMSDCCVLLEPKTNPETTGADLETQGPLTTALNNREQLQTFCTIALLVDYLSHKFHRGLPELRDSGHILDDEAILQNLYLGDVGKVRGHSHVRLGSL-------------DGVGLDVFGE----RNLNVDVHSLWSLLVASVT--GTTKLLPN-RGPFPEVQ----KLPGLTMLPGAQFIAAVVASNPVRYYRVPSLRMALDLFAYLVMLVVFSVSVLLHKEGALT------SWEIGF-----------AVYIAGAAWTEIQEMKLDIITYVKDRWNILDILALTLLAAGFLVRATDGDNPWGRALYALSAPLLFSRLVFFAQLLHFQGPMVQVLFGMARELFQFSMVMLVVILGFAMAFYALVRETDDVFGETYGETWLRVFKAMLGEVSIFEEAMDNNCKSTLEDDLADHDCNPYSPWITVLLVIYLIITSIMLLNLLVAVLTVQHQTVQENVDKEIKVSRIRVFEHYAGVVKNDTLPAPFNILQLAV---SLPIGATASLLKNCWPTVGDLMDNGNFMYIAAKIAVGKLVFWPAMSVIVIVGGSLLWLCSLPSVILVVFTHVWRETEVETNFGR-NPAKVGWKAAIWAFGSALLCTFLAPLFLFISWIWGILRGLSKVLRSCGGHRVDPNQTKAKDLGDDPKAIVEKWLGPLSVPLLREYVENPMSDPAVRQDERTRPTTVEHVKRLRTRLEQHI 6130
Y L +LS L+ A HL+KL+ + G ++C + AVASA NP IPG+ LS L + A K+ EG+++ +++V V+DLLLE+ E LP++VR F++ M + EP + P D ET P+ L+ R+Q + FC+ L++D++ KF GLP +RD IL D + +L GDV RG+ + LG+ DG +D+ E + D L + A T G+ LL + R P +Q +LP LT P AQFI A +A+ Y+RVP +RM LDL YL +LV S VL + + EI F IAG + E EM + Y++D+WN LD+L L GF+ R D G A YALSAPLL SR +FF Q+ QGPMV +F M L +F VM VV++GF MAF+ L R+ D +GE++L +FKAM GE + F N D +A T+LLV+YL I +I+LLNLLVA+L+ H VQ+N+D+E K S R+ +HY VV ND LPAPFN+LQL V + +G + + ++ G Y A+G +VFW + + +VGG+LLW+ S P + ++WR+ E + R + +G + + F L C AP++LF+ W+ G S+ L + V ++ ++I+ + G + LRE++++PM D VRQDER + TTVEHVK LR RLE I
Sbjct: 264 YGLRLLSSLVASCARPSPSHLKKLAIAHAGGEKFRDCCLDAVASASNPFIPGLVLSIRLAEAAEKTNEGEQRAITDVHARVNDLLLEILEGLPRSVRSFERDMDASGDMFEPASLPSK---DFET--PMEMILSRRQQTEIFCSAPLVMDFIKRKFTLGLPSMRDKKEILADSKEIFHLSGGDV---RGNVCLVLGTFVPITVVDADVRREDGPFIDLKAEDMDKKAARADHGQLSAQAWAHPTLLGSNCLLASFRSPRALLQGANDRLPCLTPFPAAQFIVAGLAARSNDYFRVPVMRMVLDLVVYLGVLVALSTFVLFRSQAEQSRVDGSADEEIVFRKLNWSEATCATAVIAGGMYREWFEMARNYGRYLEDQWNALDLLGLLFFTIGFIARVVDWTQQLGPAFYALSAPLLVSRALFFVQIHPLQGPMV--IFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDS-----FGESFLELFKAMFGETTFF-----NAFSGDTYDAVA-----------TMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVVWPIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVSTP-----LSVYLWRKHHREGDRKRLSLISLGCR---YFFIIPLWCILGAPVYLFVLWL-----GASRRLLCRCNYDVSIAHAESGHFRCTIESILLEGPGGVGAKKLREFLDDPMDDKDVRQDERDKRTTVEHVKLLRNRLENTI 1018
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE) HSP 1 Score: 372 bits (956), Expect = 7.480e-103 Identity = 282/818 (34.47%), Postives = 414/818 (50.61%), Query Frame = 2
Query: 3872 YRLMVLSRLLEMDANVDEDHLQKLSRNRSVGW-LKECLVGAVASARNPLIPGMTLSSILVKVACKSPEGDRKKLSEVQEGVDDLLLELFERLPQTVRGFDQGMSDCCVLLEPKTNPETTGADLETQGPLTTALNNREQLQTFCTIALLVDYLSHKFHRGLPELRDSGHILDDEAILQNLYLG--------------DVGKVRGHSHVRLGSLDGVGLDVFGERNLNVDVHSLWSLLVASVTGTTKLLPN-RGPFPEVQ----KLPGLTMLPGAQFIAAVVASNPVRYYRVPSLRMALDLFAYLVMLVVFSVSVLLHK-------EGALTSWEIGFA-----------VYIAGAAWTEIQEMKLDIITYVKDRWNILDILALTLLAAGFLVRATDGDNPWGRALYALSAPLLFSRLVFFAQLLHFQGPMVQ-----------VLFGMARELFQFSMVMLVVILGFAMAFYALVRETDDVFGETYGETWLRVFKAMLGEVSIFEEAMDNNCKSTLEDDLADHDCNPYSPWITVLLVIYLIITSIMLLNLLVAVLTVQHQTVQENVDKEIKVSRIRVFEHYAGVVKNDTLPAPFNILQLAVSLPIGATASLLKNCWPTVGDLMDN-------GNFMYIAAKIAVGKLVFWPAMSVIVIVGGSLLWLCS-LPSVILVVFTHVWRETEVETNFGRNPAKVGWKAA-IWAFGSALL------CTFLAPLFLFISWIWGILRGLSKVLRSCGGHRVDPNQTKAKDLGDDPKAIVEKWL----GPLSVPLLREYVENPMSDPAVRQDERTRPTTVEHVKRLRTRLE 6121
+ L +LS L+ A HL+KL+ + G K+C + AV SA NP IPG+ LS L + A K+ EG+R+ ++++QE V+ LLLE+ ERLP++VR F++ M DC + EPK + + PL L+ ++Q + FC + L++D+L KF LP LRD +L D + +L G DV + H+ +D + + + + W ++ G+ LL + R P +Q + P LT PGAQ I A +A+ P Y+RVP++RM LDL Y+ M+V S VL H EG+ T ++ F ++I G + E +EM + Y +D+WN LD+L+L L G + R D + G A YAL+APLL SR +FF Q+ QGPM+Q V+F M R L +F VM V++LGF MAF+ L R+ D +GE++L +FKAMLG+ F+ + Y T LLV+YL I ++MLLNLLVA+L+ H V EN+++E KVS R+ +HY VV ND LP PFN+LQL V PI A L C + N Y A+G +VFW + + ++GGSLLW+ S LP++ + WR+ N N ++ +W+ + C F AP++L + W L +VL C + D ++ AK K+ +E L G + LRE++++PM D VRQDE+ R TTVEH+K LR RLE
Sbjct: 446 FGLKLLSSLMACSARPSPSHLKKLAIAHARGEAFKDCCLDAVTSAANPFIPGLVLSIRLAEAAEKANEGERRAITDIQESVNALLLEVLERLPRSVRSFERDMDDCRDMFEPK----FLDVFEDFEKPLEMMLSRQQQRELFCNVPLVMDFLKRKFTLSLPRLRDPKEVLADSNEILHLSRGGVKGDVCLVLDWGVDVDVQKEDGHLNDEQIDXXXXXXXXQADDHASLRPPWKH--PTLFGSKSLLASFRSPRALLQGANDRFPSLTPFPGAQVIVAGLAARPNDYFRVPAMRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGS-TDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQASGETKRFPQRVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDS-----FGESFLDLFKAMLGDTDFFKVFSGDT----------------YDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIV-WPI---AWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIGPVVFWVVLGPVAVIGGSLLWMGSVLPAM------YFWRKHHRLQNKRDNGGGDSKRSMHLWSLFLRYVVIIPCWCVFGAPVYLLLLW----LNASRRVLSRCPCN--DDTRSTAKSRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLE 1219
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 335 bits (860), Expect = 3.140e-92 Identity = 249/663 (37.56%), Postives = 341/663 (51.43%), Query Frame = 2
Query: 3887 LSRLLEMDANVDEDHLQKLSRNRSVGWLKECLVGAVASARNPLIPGMTLS-SILVKVACKSPEGDRKKLSEVQEGVDDLLLELFERLPQTVRGFDQGMSDCCVLLEPKTNPETTGADLETQGPLTTALNNREQLQTFCTIALLVDYLSHKFHRGLPELRDSGHILDDEAILQNLYLGDVGKVRGHSHVRLGSLDGVGLDVFGERNLNVDVHSLWSLLVASVTGTTKLLPNRGPFP-EVQKLPGLTMLPGAQFIAAVVASNPVRYYRVPSLRMALDLFAYLVMLVVFSVSVLLHKEGALTSWEIGFAVYIAGAAWTEIQEMKLDIITYVKDRWNILDILALTLLAAGFLVRATDGDNPWGRALYALSAPLLFSRLVFFAQLLHFQGPMVQVLFGMARELFQFSMVMLVVILGFAMAFYALVRETDDVFGETYGETWLRVFKAMLGEVSIFEEAMDNNCKSTLEDDLADHDCNPYSPWITVLLVIYLIITSIMLLNLLVAVLTVQHQTVQENVDKEIKVSRIRVFEHYAGVVKNDTLPAPFNILQLAVSLPIGATASLLKNCWPTVGDLMDNGNFMYIAAKIAVGKLVFWPAMSVIVIVGGSLLWLCSLPSVILVVFTHVWRETEVETNFGRNPAKVGWKAAIWAFGSALLCTFLAPLFLFISWI 5869
LS LL+ L L R L ECL AVASA+N IP + LS + + + E DR+ L+ +Q VD +L E RLPQ+V G GM+ C LLEP+ +++ +GPL AL ++ TF T L ++++ KF RGLP L+D +L IL+ L + +GH SL +L S+ G LP G + +L LT PGA FIA V + P YY+VP +RMAL+ + L F+ VLL ++G LT E+ FA+Y+ A E EM D+ Y+ DRW LAL + A FL RA D D+ WGR LYA+ +PL++ RL+++AQ++ QG +QVL+GMA EL QF +VM VVILGFAM+F+AL R DV GET L F+AMLGEV +F++ + + DLA TVLLV YL++ +IMLLNLL+AVL+ H V+E V I+VSR RV+ HY VV D LPAPFN+ QL V LP D++ GN Y A+ VG++VFW + I+GG +WL S P + ++ R + + GR + W T PL L +SW+
Sbjct: 334 LSMLLQHGTKPHPTDLVILCRAIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERDRRVLARLQHDVDSILTETLNRLPQSVCGLSGGMAACTALLEPEVADDSS--TYGERGPLARALGCTHRIVTFATTPLCMNFMLLKFTRGLPALKDGHSVL----ILEKSRLDIREEAKGH-------------------------ESLTALCPGSILGG--FLPRVGKLLWDDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVLLFEKGQLTIAEVAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDPDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALFR---DVKGETIRGALLDAFQAMLGEVGLFDDFVGE------KHDLAA----------TVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMV------------DVLFKGN-TYPIARRGVGRIVFWLLLGPGAILGGVFVWLVSTPKALFAIWGK--RSLSIASRLGRTMLCLLW------------ITLGVPLCLVVSWV 915
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 333 bits (855), Expect = 6.050e-91 Identity = 251/663 (37.86%), Postives = 339/663 (51.13%), Query Frame = 2
Query: 3887 LSRLLEMDANVDEDHLQKLSRNRSVGWLKECLVGAVASARNPLIPGMTLS-SILVKVACKSPEGDRKKLSEVQEGVDDLLLELFERLPQTVRGFDQGMSDCCVLLEPKTNPETTGADLETQGPLTTALNNREQLQTFCTIALLVDYLSHKFHRGLPELRDSGHILDDEAILQNLYLGDVGKVRGHSHVRLGSLDGVGLDVFGERNLNVDVHSLWSLLVASVTGTTKLLPNRGPFP-EVQKLPGLTMLPGAQFIAAVVASNPVRYYRVPSLRMALDLFAYLVMLVVFSVSVLLHKEGALTSWEIGFAVYIAGAAWTEIQEMKLDIITYVKDRWNILDILALTLLAAGFLVRATDGDNPWGRALYALSAPLLFSRLVFFAQLLHFQGPMVQVLFGMARELFQFSMVMLVVILGFAMAFYALVRETDDVFGETYGETWLRVFKAMLGEVSIFEEAMDNNCKSTLEDDLADHDCNPYSPWITVLLVIYLIITSIMLLNLLVAVLTVQHQTVQENVDKEIKVSRIRVFEHYAGVVKNDTLPAPFNILQLAVSLPIGATASLLKNCWPTVGDLMDNGNFMYIAAKIAVGKLVFWPAMSVIVIVGGSLLWLCSLPSVILVVFTHVWRETEVETNFGRNPAKVGWKAAIWAFGSALLCTFLAPLFLFISWI 5869
LS LL+ L L R L ECL AVASA+N IP + LS + + + E DR+ L+ +Q VD +L E +RLPQTV G GM+ C LLEP+ +++ +GPL AL ++ TF T L ++++ KF RGLP L D +L IL+ L + +GH SL +L S+ G LP G E +L LT PGA FIA V + P YY+VP +RMALD + L F+ VLL ++G+LT E+ FA+Y+ A E EM D+ Y+ DRW LAL + A FL RA D D+ WGR LYA+ +PL++ RL+++AQ++ QG +QVL+ MA EL QF +VM VVILGFAM+F+AL R DV GET L F+AMLGEV +F++ + + DLA TVLLV YL++ +IMLLNLL+AVL+ H V+E V I+VSR RV+ HY VV D LPAPFN+ QL V LP DL+ N Y A+ VG++VFW + I+GG +WL S P + + R + + GR + W T PL L +SW+
Sbjct: 425 LSMLLQHGTKPHPADLVILCRAIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERDRRVLARLQHDVDSILTETLDRLPQTVCGLSGGMAACTALLEPEEADDSS--TYGERGPLARALGCPHRIVTFATTPLCMNFMLLKFTRGLPALNDGHSVL----ILEKSRLDVREEAKGH-------------------------ESLTALCPGSILGG--FLPRVGKLLWEDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVLLFEKGSLTIAEMAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDSDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFR---DVKGETLRGALLDAFQAMLGEVGLFDDFVGE------KHDLAA----------TVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMV------------DLLFKSN-TYPIARRGVGRIVFWLVLGPGAILGGIFVWLVSTPKALFAICRK--RSLSILSRVGRTMLCLLW------------ITLGVPLCLVVSWV 1006
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Match: A0A6H5KIV5_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIV5_9PHAE) HSP 1 Score: 327 bits (837), Expect = 1.080e-89 Identity = 273/828 (32.97%), Postives = 389/828 (46.98%), Query Frame = 2
Query: 3884 VLSRLLEMDANVDEDHLQKLSRNRSVGWLKECLVGAVASARNPLIPGMTLSSILVKVACKSPEGDRKKLSEVQEGVDDLLLELFERLPQTVRGFDQG------MSDCCVLLEP-KTNP-----------ETTGADLETQGPLTTALNNREQLQTFCTIALLVDYLSHKFHRGLPELRDSGHILDDEAILQNLYLGDVGKVRGHSHVRLGSLDGVGLDVFGERNLNVDVHSLWSLLVASVTGTTKLLPNRGPFPEVQKLPGLTMLPGAQFIAAVVASNPVRYYRVPSLRMALDLFAYLVMLVVFSVSVLLHKEGALTSWEIGFAVYIAGAAWTEIQEMKLDIITYVKDRWNILDILALTLLAAGFLVRATDGDNPWGRALYALSAPLLFSRLVFFAQLLHFQGPMVQV------------------LFGMARELFQFSMVMLVVILGFAMAFYALVRETDDVFG-ETYGETWLRVFKAMLGEVSIFEE--------------AMDNNCKSTLEDDLADHDCNPYSPWI-TVLLVIYLIITSIMLLNLLVAVLTVQHQTVQENVDKEIKVSRIRVFEHYAGVVKNDTLPAPFNILQLAVSLPIGATASLLKNCWPTVGDLMDNGNFMYIAAKIAVGKLVFWPAMSVIVIVGGSLLWLCSLPSVILVVFTHVWRETEVETNFGRNPAKVGWKAAIWAFGSALLCTFLAPLFLFISWIW---------------------GILRGLSKVLRSCGGHRVDPNQTKAKDLGDDPKAIVEKWL----------GPLSVPLLREYVENPMSDPAVRQDERTRPTTVEHVKRLRTRL 6118
V S L++ A + + R ++C + AV SA NPL+ GM LS +L A EG R+ +Q V+DL+LE+FERLPQTV GF +G M C V+ P K P + TG GPL AL R QL+ FCT L++DYL+ F RGLP L D+ EA L + + ++ V++ + DG L V S SV G+ LT+ G QFI A V + P Y VP++RMA+DL YL+ML +F+ VL +KEG + E+ F VY+ GA EI E+ Y+KD WN LD+ AL FLVR D ++ WGRALY APLL R +FFAQ + QGPM++V +F +A EL +F ++LV ++GFAM+F+AL R + V +TY T + + +AMLGE ++++ + + +C+ L + + ++ + LL Y ++ I+LLNLL+AVL+ + V+EN+D E KV+R V HY V D LP P N++Q AVS T ++L G LM ++ A+ G ++FW + ++ GS+LW S P + + F + +V A + AL C PL + W+W G G ++ RS G R P+ DD I+ K L G L+V LRE++ NPM DP V++DE TR TTVEHVK LR L
Sbjct: 156 VFSCLIKHGAAPTPRQVSLVGRKAGFEAARKCFLDAVCSAVNPLLVGMRLSLLLADAAGMGNEGQRQVALRLQNEVEDLVLEVFERLPQTVDGFREGDVGGSGMDACSVVFAPEKIRPRDETIPSHLFQDGTGGTRVDSGPLEMALQARHQLELFCTQPLVLDYLNRAFTRGLPGL-DASETGAQEADQFKLLM------QRNASVQVNAGDGESSGEVSRELLEVLEGS------HSVLGS------------------LTLSAGKQFILAQVVARPAFSYSVPAVRMAVDLLVYLLMLALFAKDVLWYKEGTVEVGEVVFFVYVLGAILVEITELWDGREEYMKDHWNALDVAALAFCGGAFLVRVYDPESLWGRALYCAGAPLLLFRTLFFAQFMPAQGPMIEVKEARGYPSFLRDLGLSLIIFSLAGELLRFCTILLVTMMGFAMSFFALFRHSCTVGSFQTYWSTSIALLRAMLGETKLYDDFTVAAECCYDAVEPSDEFHCEDFLMECCHSVESEHFNGLVGKALLAAYNVVMGIILLNLLIAVLSEAYVDVKENIDTESKVTRTLVIRHYMKAVDQDMLPPPLNLIQHAVS-----TLAML------FGSLMGKTG-VFRKAEFYSGLVLFWFVSGLFAVLAGSILWAISWPRGVFMFFLRR----------SSHSGRVSGSAQL----VALFCGVAMPLLMLYKWLWTSTCGALWRHLVDGGAWSNDGGASAGYDEI-RSDGSRRPRPH--------DD--GIIGKTLERYGGTAGQGGALNVHQLREFLANPMKDPVVQRDEETRETTVEHVKLLRDNL 915
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI) HSP 1 Score: 320 bits (819), Expect = 4.770e-85 Identity = 259/782 (33.12%), Postives = 367/782 (46.93%), Query Frame = 2
Query: 3869 DYRLMVLSRLLEMDANVDEDHLQKLSRNRSVGWLKECLVGAVASARNPLIPGMTLSSILVKVACKSPEGDRKKLSEVQEGVDDLLLELFERLPQTVRGFDQGMSDCCVLLEPKTNPETTGADLETQGPLTTALNNREQLQTFCTIALLVDYLSHKFHRGLPELRDSGHILDDEAILQNLYLGDVGKVRGHSHVRLGSLDGVGLDVFGERNLNVDVHSLWSLLVASVTGTTKLLPNRGPFPEVQKLPGLTMLPGAQFIAAVVASNPVRYYRVPSLRMALDLFAYLVMLVVFSVSVLLHKEGALTSW-EIGFAVYIAGAAWTEIQEMKLDIITYVKDRWNILDILALTLLAAGFLVRATDG-DNPWGRALYALSAPLLFSRLVFFAQLLHFQGPMVQVLFGMARELFQFSMVMLVVILGFAMAFYALVRETDDVFGETYGETWLRVFKAMLGEVSIFEEAMDNNCKSTLEDDLADHDCNPYSPWITVLLVIYLIITSIMLLNLLVAVLTVQHQTVQENVDKEIKVSRIRVFEHYAGVVKNDTLPAPFNILQLAVSLPIGATASLLKNCWPTVGDLMDNGNFMYIAAKIAVGKLVFWPAMSVIVIVGGSLLWLCSLPSVILVVFTHVWRETEVETNFGRNPAKVGWKAAIWAFGSALLCTFLAPLFLFISWIWGILRGLSKVLRSCG----------------GHRVD---------PNQTKAKDLGDDPKAIVEKWL----GPLSVPLLREYVENPMSDPAVRQDERTRPTTVEHVKRLRTRLE 6121
D RL VL+ LL+ A L +L LKE L+GA++SA NP IPGM LS ++ EG++++L+ +Q +D+LLLE+ E +PQTV+GF M DC + EP+T QGPL L+ R+Q++T+CTI L++D++S KF +GLP LRD+ +L L N + G+ +L G GL G V L S G T L +T PGA+FI A + S P YY+VP+LRM LDL Y++M+++F V+LH G W EI F +YI G TE +E+ D Y++D+WN+LD+ +LTLL G + R D+ RALYALSAPL F+R++FF Q+L QGP++QV+F M L +F M+ML+V+LGF +FY+L +ET TYG W +F+A LGE F++ T D +A T LLV+YL++ +IM+LNLLVAVL+ H V + E K AP + W T GD G +IA ++LV+F C AP + + W+ G + G+ + +R+ G G R P T A+ D + +V L G L+ L+ ++++PMSDPAVR+DE TR TTVEH+K LR RLE
Sbjct: 645 DARLSVLAYLLQHGAKPTNKGLLRLCNLVKFPRLKESLLGAISSADNPFIPGMNLSVACTMATRRAMEGEKRRLASMQAAIDELLLEVLEHMPQTVKGFKGEMRDCSAIFEPET---VISRFHGYQGPLHVVLSKRQQMETYCTIPLVLDFMSRKFTKGLPSLRDTEGVL-----LNNTSFTEPGQ----------TLYGDGLLAEGR------VFFFGMALQRSYAGGT--------------LSSITYFPGARFIIAGLLSRPGSYYKVPALRMCLDLVTYILMMIIFGGFVILHDAGDTFDWMEIVFTMYIFGGILTEFREILDDPWEYMRDQWNLLDVASLTLLLGGVIQRMYGQVDDQSSRALYALSAPLAFARILFFVQILPSQGPIIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETT-----TYGVVWKAIFRATLGETDYFDDF-----SGTTFDGVA-----------TALLVVYLVLLTIMMLNLLVAVLSTAHAKVDADAGLEYK--------------------APVVV-------------------WQTSGDKSRGG-------RIA---------------------------RMLLVIFA---------------------------------CAVGAPFWHLVMWVRGGVAGVRRTMRALGCCXXXXXXXXGGAKRVGGRTPTASMTVRGFPATTVAEGAEHDMEKVVPIVLQEADGALATSELQIFLDDPMSDPAVRRDEETRATTVEHIKLLRNRLE 1261 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig891.16790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig891.16790.1 >prot_H-paniculata_contig891.16790.1 ID=prot_H-paniculata_contig891.16790.1|Name=mRNA_H-paniculata_contig891.16790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1887bp MADVCRSKDVHRRTLLTAAVQSGSIEVVMAVSGFMERHNTHDQMVDVCRDback to top mRNA from alignment at H-paniculata_contig891:1116..29564- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig891.16790.1 ID=mRNA_H-paniculata_contig891.16790.1|Name=mRNA_H-paniculata_contig891.16790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=28449bp|location=Sequence derived from alignment at H-paniculata_contig891:1116..29564- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig891:1116..29564- >mRNA_H-paniculata_contig891.16790.1 ID=mRNA_H-paniculata_contig891.16790.1|Name=mRNA_H-paniculata_contig891.16790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=11322bp|location=Sequence derived from alignment at H-paniculata_contig891:1116..29564- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |