mRNA_H-paniculata_contig890.16783.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Match: A0A6H5K9Y6_9PHAE (dTMP kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9Y6_9PHAE) HSP 1 Score: 159 bits (403), Expect = 4.630e-47 Identity = 77/104 (74.04%), Postives = 86/104 (82.69%), Query Frame = 1
Query: 10 DVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASKPGLDVAWCKDPDRGLPAPDKIIFLDISVEDAMKRGQFGQERYEKDDFQRQVRAKFMTL 321
D +H FS ++ KIRE LK GTT+VCDRYAYSGVAFSASKPGL V WCKDPDRGLPAPDKI+FLDISVEDAMKRGQFG+ERYEK++FQR VRA F+ L
Sbjct: 86 DRCVHLLFSANRWE-AESKIRELLKVGTTVVCDRYAYSGVAFSASKPGLSVRWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLAL 188
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Match: A0A835ZMW1_9STRA (dTMP kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMW1_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.690e-39 Identity = 70/107 (65.42%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 1 EMLDVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASKPGLDVAWCKDPDRGLPAPDKIIFLDISVEDAMKRGQFGQERYEKDDFQRQVRAKFMTL 321
EM D IH FS ++ I RL AG TIVCDRYAYSGVAFSA+KPGL V WCK PD+GLPAPD +I+LD++VE AM+RGQFG+ERYEK DFQR+VR FM L
Sbjct: 75 EMDDQCIHLLFSANRWE-ALSTIERRLAAGLTIVCDRYAYSGVAFSAAKPGLTVDWCKAPDKGLPAPDVVIYLDLAVEAAMERGQFGEERYEKADFQRRVRDNFMAL 180
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Match: A0A7S2H363_9STRA (dTMP kinase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H363_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.140e-37 Identity = 65/107 (60.75%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 1 EMLDVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASKPGLDVAWCKDPDRGLPAPDKIIFLDISVEDAMKRGQFGQERYEKDDFQRQVRAKFMTL 321
+M D IH FS ++ R KI + L+AGTTIVCDRYAYSGVAFS +K GL V WC PDRGLP PD +I+LD+SVEDAM+RG FG+ERYEK++FQR+V F +
Sbjct: 115 DMDDRAIHLLFSANRWE-ARAKIEDTLRAGTTIVCDRYAYSGVAFSGAKEGLSVEWCMAPDRGLPCPDCVIYLDLSVEDAMQRGAFGEERYEKEEFQRRVSDNFKAI 220
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Match: A0A7S2WP01_9STRA (dTMP kinase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WP01_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.680e-36 Identity = 63/107 (58.88%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 1 EMLDVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASKPGLDVAWCKDPDRGLPAPDKIIFLDISVEDAMKRGQFGQERYEKDDFQRQVRAKFMTL 321
+M D IH FS ++ R +I L +G +IVCDRYA+SGVAFSA+KPGL + WC DRGLPAPD +IFLD+S+E+AMKRG+FG+ERYEK++FQR V A F L
Sbjct: 4 DMDDKAIHLLFSANRWE-ARQRIESILLSGKSIVCDRYAFSGVAFSAAKPGLSMQWCASSDRGLPAPDCVIFLDLSIEEAMKRGEFGEERYEKEEFQRTVYANFDKL 109
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Match: A0A2R5GGP8_9STRA (dTMP kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGP8_9STRA) HSP 1 Score: 127 bits (320), Expect = 7.610e-35 Identity = 59/107 (55.14%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 1 EMLDVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASKPGLDVAWCKDPDRGLPAPDKIIFLDISVEDAMKRGQFGQERYEKDDFQRQVRAKFMTL 321
E+ D +H FS ++ + IR++L AGTT++ DRYA+SGV FSA+K G+D+ WCK PD GLPAPD +IFL +++ DAMKRGQFG+ERYEK DFQ +V FM +
Sbjct: 66 ELDDHAVHLLFSANRWESAQA-IRKKLAAGTTLIVDRYAHSGVCFSAAKQGMDIEWCKAPDAGLPAPDAVIFLKLAIADAMKRGQFGEERYEKQDFQTKVLDNFMQM 171
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Match: A0A1Z5K5E1_FISSO (dTMP kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5E1_FISSO) HSP 1 Score: 127 bits (318), Expect = 2.570e-34 Identity = 63/107 (58.88%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 1 EMLDVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASKPGLDVAWCKDPDRGLPAPDKIIFLDISVEDAMKRGQFGQERYEKDDFQRQVRAKFMTL 321
M D IH FS ++ + I E+LKAGT+IVCDRYAYSGVAFSASK +D+ WC+ PDRGLPAPD +IFLD+S E A +RG +GQERYEK + Q++VR +F L
Sbjct: 68 NMDDRAIHLLFSANRWESADM-IVEQLKAGTSIVCDRYAYSGVAFSASKDNMDLEWCQAPDRGLPAPDCVIFLDMSTEQAEERGGYGQERYEKREMQQRVRQRFQEL 173
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Match: L1JWU7_GUITC (dTMP kinase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JWU7_GUITC) HSP 1 Score: 123 bits (309), Expect = 3.380e-33 Identity = 58/107 (54.21%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 1 EMLDVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASKPGLDVAWCKDPDRGLPAPDKIIFLDISVEDAMKRGQFGQERYEKDDFQRQVRAKFMTL 321
++ D +IH FS ++ R IR+RL +G T++ DRYAYSGVAFSA+K LD+ WCK PDRGLPAPD +I+LD+S + A +RG +G+ERYEK++FQ++VR F L
Sbjct: 61 DLDDAVIHLLFSANRWEATR-SIRDRLSSGETLIVDRYAYSGVAFSAAKGTLDIEWCKGPDRGLPAPDCVIYLDVSSDVAKQRGGYGEERYEKEEFQKKVRTCFEAL 166
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Match: A0A7S3H922_9STRA (dTMP kinase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H922_9STRA) HSP 1 Score: 124 bits (310), Expect = 5.140e-33 Identity = 63/107 (58.88%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 1 EMLDVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASKPGLDVAWCKDPDRGLPAPDKIIFLDISVEDAMKRGQFGQERYEKDDFQRQVRAKFMTL 321
M D IH FS ++ I +L G T++CDRYAYSGVAF+++K GLD+ WCK DRGLPAPD II+LDI VEDA KRG FG+ERYEK DFQ++VR +FM L
Sbjct: 90 NMNDQSIHLLFSANRWEQSD-SIESKLANGNTLICDRYAYSGVAFTSAK-GLDLDWCKSCDRGLPAPDCIIYLDIPVEDAAKRGNFGEERYEKIDFQKKVREQFMLL 194
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Match: A7S8M7_NEMVE (dTMP kinase n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7S8M7_NEMVE) HSP 1 Score: 118 bits (296), Expect = 3.240e-31 Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 1
Query: 1 EMLDVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASKPGLDVAWCKDPDRGLPAPDKIIFLDISVEDAMKRGQFGQERYEKDDFQRQVRAKFMTL 321
E+ D IH FS ++ KIR L GTTIV DRYA+SGVAF+++K G D+ WCK PDRGLPAPD +IFLDISV++A +R ++G ERYE DFQR V ++ L
Sbjct: 63 ELDDHAIHLLFSANRWESVS-KIRSLLNTGTTIVVDRYAFSGVAFTSAKKGFDLEWCKAPDRGLPAPDIVIFLDISVDNAAERSEYGGERYETSDFQRSVANRYKEL 168
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Match: A0A087SKT4_AUXPR (dTMP kinase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SKT4_AUXPR) HSP 1 Score: 116 bits (291), Expect = 4.680e-31 Identity = 59/109 (54.13%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 1 EMLDVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASK--PGLDVAWCKDPDRGLPAPDKIIFLDISVEDAMKRGQFGQERYEKDDFQRQVRAKFMTL 321
E D +H FS ++ R + ERL +GTT++ DRYA+SGVAF+A+K PGLD AWC+ PD GLPAPD + FLD+S E A +RG +GQERYE D Q++VR F TL
Sbjct: 11 EADDAAMHLLFSANRWEK-RAAMLERLNSGTTLIVDRYAHSGVAFTAAKGLPGLDTAWCRAPDVGLPAPDTVFFLDLSPEQAAERGGYGQERYETTDLQKKVRQAFGTL 118 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig890.16783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig890.16783.1 >prot_H-paniculata_contig890.16783.1 ID=prot_H-paniculata_contig890.16783.1|Name=mRNA_H-paniculata_contig890.16783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp MLDVLIHAFFSLHKPSPGRLKIRERLKAGTTIVCDRYAYSGVAFSASKPGback to top mRNA from alignment at H-paniculata_contig890:26570..28044+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig890.16783.1 ID=mRNA_H-paniculata_contig890.16783.1|Name=mRNA_H-paniculata_contig890.16783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1475bp|location=Sequence derived from alignment at H-paniculata_contig890:26570..28044+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig890:26570..28044+ >mRNA_H-paniculata_contig890.16783.1 ID=mRNA_H-paniculata_contig890.16783.1|Name=mRNA_H-paniculata_contig890.16783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=636bp|location=Sequence derived from alignment at H-paniculata_contig890:26570..28044+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |