mRNA_H-paniculata_contig8896.16777.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8896.16777.1
Unique NamemRNA_H-paniculata_contig8896.16777.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Match: D7G6M6_ECTSI (Catalase decomposes hydrogen peroxide to molecular oxygen and water n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M6_ECTSI)

HSP 1 Score: 642 bits (1657), Expect = 9.350e-228
Identity = 308/452 (68.14%), Postives = 346/452 (76.55%), Query Frame = 1
Query:    1 FDTLEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGCDGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVAIKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLGTGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHAFGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGAWTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPDIVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPATRCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVPDTFNGKPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAINRGL 1356
            ++ L+ADI  + TDSQDFWPADF NY  LMIRLAWHC+G+YRQSDGRGGCDGGRIRFNPERSW DNTNLDKALTLLQP+KLKYGDAVSWGDLI LTG  AI+SMGGP +GFCAGR DD SGF SLELGP+PEQEAVAPC  NG CE PLGT TVGLIYVNPEG +G+P+P  S   IR+VFGRMGMND+ETVALIGGGHAFGKFHG C TGPGP+PT+ P  PWPGTCG PDSP FG   NTFTSGFEG WTVEP VWDN YFKDLLEY+W     P  + QW PV+K  +TE EDEIPDI+MLTSD+ALLYD  YL +V  FA +   LD AF+ AWYKLTSRDMG   RC G +V PPQDFQ PLPE     PD D  +               S +    +  PSY AL  TLA+QC  ++RSTD+LGGCN ARI+FSP++DWA N+GL
Sbjct:   65 YEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRSMGGPVLGFCAGRLDDASGFDSLELGPSPEQEAVAPCAVNGTCEFPLGTSTVGLIYVNPEGPLGVPDPAGSAADIRDVFGRMGMNDSETVALIGGGHAFGKFHGACATGPGPDPTDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETEDEIPDIIMLTSDIALLYDEEYLALVELFASDLSYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPADLPDTDGAK---------------SAIMSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPERDWAGNQGL 501          
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Match: A0A6H5JXZ4_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ4_9PHAE)

HSP 1 Score: 635 bits (1639), Expect = 1.270e-221
Identity = 307/452 (67.92%), Postives = 344/452 (76.11%), Query Frame = 1
Query:    1 FDTLEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGCDGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVAIKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLGTGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHAFGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGAWTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPDIVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPATRCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVPDTFNGKPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAINRGL 1356
            ++ L+ADI  + TDSQDFWPADF NY  LMIRLAWHC+G+YRQSDGRGGCDGGRIRFNPERSW DNTNLDKALTLLQP+KLKYGDAVSWGDLI LTG  AI+SMGGP +GFCAGR DD SGF SLELGP+PEQEAVAPC  NG CE PLGT TVGLIYVNPEG +G+P+P  S   IR+VF RMGMND+ETVALIGGGHAFGKFHG C TGPG +PT+ P  PWPGTCG PDSP FG   NTFTSGFEG WTVEP VWDN YFKDLLEY+W     P  + QW PV+K  +TE +DEIPDI+MLTSD+ALLYD  YL +V  FA +   LD AF+ AWYKLTSRDMG   RC G +V PPQDFQ PLPE  T  PD           EG       S +    +  PSY AL  TLA+QC  ++RSTDYLGGCN ARI+FSP++DWA N+ L
Sbjct:   65 YEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRSMGGPVLGFCAGRLDDASGFDSLELGPSPEQEAVAPCAVNGTCEFPLGTSTVGLIYVNPEGPLGVPDPAGSAADIRDVFRRMGMNDSETVALIGGGHAFGKFHGACATGPGADPTDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETKDEIPDIIMLTSDIALLYDEEYLALVELFASDLSYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPD----------TEGA-----KSAIMSILSSDPSYPALFVTLAWQCASTYRSTDYLGGCNGARIRFSPERDWAGNQSL 501          
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Match: D7G7J0_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J0_ECTSI)

HSP 1 Score: 622 bits (1605), Expect = 1.070e-219
Identity = 299/452 (66.15%), Postives = 343/452 (75.88%), Query Frame = 1
Query:    1 FDTLEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGCDGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVAIKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLGTGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHAFGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGAWTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPDIVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPATRCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVPDTFNGKPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAINRGL 1356
            ++ ++ADI  +  DS+DFWPADF NY  LMIRLAWHC+GSYR SDGRGGCDGGRIRF PE  W DNTNLDKALTLL P+KLK+GDA+SWGDLI LTG +AI SMGGP +GFCAGRQDD SG+ SLELGPT EQEA APC  NG CE PLGT TVGLIYVNP G MG+PEP  S   IREVF RMGMNDTETVALIGGGHAFGK HG C TGPG +P + P  PWPGTCG PDS  FG G NTFTSGFEGAWT EPTVWDN YF DLLEY+W ++  P G  QW PV+K ++TE +  +PDI+MLTSDVALL D  YL IV +FA NQ++LDVAFSNAWYKL +RDMGP TRC G +VPPPQDFQ PLP+  T  P      +  +A+  +L+ + +            YA+LL TLA+QC  +FRSTDY+GGCN ARI+F PQ +WA N GL
Sbjct:   63 YEAIKADILAVFVDSKDFWPADFGNYAPLMIRLAWHCAGSYRNSDGRGGCDGGRIRFFPEHGWADNTNLDKALTLLTPIKLKHGDAISWGDLITLTGDMAISSMGGPILGFCAGRQDDSSGYDSLELGPTEEQEATAPCAVNGTCEVPLGTSTVGLIYVNPGGPMGVPEPTESAPQIREVFARMGMNDTETVALIGGGHAFGKVHGACPTGPGADPIDAPEDPWPGTCGDPDSDTFGKGDNTFTSGFEGAWTEEPTVWDNHYFIDLLEYDWIQDESPAGNIQWIPVLKEDATETD--VPDIIMLTSDVALLMDTEYLAIVEEFASNQEALDVAFSNAWYKLVTRDMGPYTRCVGTDVPPPQDFQLPLPDKPTDLPS---STEAKRAIGRILEADST------------YASLLVTLAYQCASTFRSTDYMGGCNGARIRFPPQSEWASNAGL 497          
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Match: D7G523_ECTSI (PEROXIDASE_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G523_ECTSI)

HSP 1 Score: 643 bits (1659), Expect = 1.650e-219
Identity = 308/452 (68.14%), Postives = 346/452 (76.55%), Query Frame = 1
Query:    1 FDTLEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGCDGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVAIKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLGTGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHAFGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGAWTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPDIVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPATRCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVPDTFNGKPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAINRGL 1356
            ++ L+ADI  + TDSQDFWPADF NY  LMIRLAWHC+G+YRQSDGRGGCDGGRIRFNPERSW DNTNLDKALTLLQP+KLKYGDAVSWGDLI LTG  AI+SMGGP +GFCAGR DD SGF SLELGP+PEQEAVAPC  NG CE PLGT TVGLIYVNPEG +G+P+P  S   IR+VFGRMGMND+ETVALIGGGHAFGKFHG C TGPGP+PT+ P  PWPGTCG PDSP FG   NTFTSGFEG WTVEP VWDN YFKDLLEY+W     P  + QW PV+K  +TE EDEIPDI+MLTSD+ALLYD  YL +V  FA +   LD AF+ AWYKLTSRDMG   RC G +V PPQDFQ PLPE     PD D  +               S +    +  PSY AL  TLA+QC  ++RSTD+LGGCN ARI+FSP++DWA N+GL
Sbjct:   65 YEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRSMGGPVLGFCAGRLDDASGFDSLELGPSPEQEAVAPCAVNGTCEFPLGTSTVGLIYVNPEGPLGVPDPAGSAADIRDVFGRMGMNDSETVALIGGGHAFGKFHGACATGPGPDPTDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETEDEIPDIIMLTSDIALLYDEEYLALVELFASDLSYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPADLPDTDGAK---------------SAIMSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPERDWASNQGL 501          
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Match: D8LN39_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN39_ECTSI)

HSP 1 Score: 613 bits (1582), Expect = 1.910e-214
Identity = 295/452 (65.27%), Postives = 339/452 (75.00%), Query Frame = 1
Query:    1 FDTLEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGCDGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVAIKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLGTGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHAFGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGAWTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPDIVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPATRCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVPDTFNGKPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAINRGL 1356
            ++ ++ADI ++  DS+DFWPADF NYG L IRLAWHC+GSYR SDGRGGCDGGRIRF PE  W DNTNLDKALTLLQP+KLKYGDA+SW DLI LTG +AI SMGGP +GFCAGRQDDDSG+ SLELGPTPEQEA APC  NG CE PLGT TVGLIYVNP G MG+P+P  S   IREVF RMGMNDTETVALIGGGHAFGK HG C +GPGP+P + P  PWPGTCG PDS  FG   NTFTSGFEGAWT EPTVWDN YF DLLEY+W +   P G  QW PV+K ++TE +  +PDI+MLTSDVALL D  YL IV +FA +Q +LD+AFSNAWYKL +RDMGP +RC G +VPPPQ+FQ PL +     P    Y    +A+  +L  E +            YA L  TLA+QC  +FRSTDY+GGCN ARI+F PQ +WA N GL
Sbjct:  124 YEAIQADIVSMFVDSKDFWPADFGNYGPLFIRLAWHCAGSYRASDGRGGCDGGRIRFFPEHGWADNTNLDKALTLLQPIKLKYGDAISWADLITLTGDMAISSMGGPILGFCAGRQDDDSGYDSLELGPTPEQEATAPCAVNGTCELPLGTSTVGLIYVNPGGPMGVPDPEASAPQIREVFSRMGMNDTETVALIGGGHAFGKVHGACPSGPGPDPFDAPEAPWPGTCGDPDSATFGRAENTFTSGFEGAWTEEPTVWDNSYFVDLLEYDWIQAESPAGNIQWIPVLKEDATETD--VPDIIMLTSDVALLMDPEYLAIVEEFAADQYALDIAFSNAWYKLVTRDMGPHSRCVGTDVPPPQEFQLPLADTPKDLPS---YSGAKEAIGRILSEEST------------YAPLFVTLAYQCASTFRSTDYMGGCNGARIRFPPQSEWASNAGL 558          
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Match: A0A8J4F3U4_9CHLO (PEROXIDASE_4 domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F3U4_9CHLO)

HSP 1 Score: 587 bits (1514), Expect = 5.220e-203
Identity = 284/448 (63.39%), Postives = 332/448 (74.11%), Query Frame = 1
Query:    4 DTLEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGCDGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVAIKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLGTGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHAFGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGAWTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPDIVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPATRCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVPDTFNGKPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAIN 1347
            D ++AD++ L  DS+D WPADF NYG LMIR+AWHC+G+YRQSDGRGGCDGGR RF+PERSW DN NLDKA  LL P+K KYG+A++WGDLI L G  AI+SMGGP +GFCAGR DD  G ASL LGP+ +QE VAPC  NG CEAPLG  T+ LIYVNPEG M +P+P  S   IREVFGRM MND+ETVALIGGGHAFGK HG C TGPGP+P + P  PWPGTCG  + P  G G NTFTSGFEG WT  P  WDNEYF++LL+Y+WE  +GPGG  QWRPV K  S    D + +I+MLT+DVALL D  YLE+V  FA NQ +LD+AFS+AWYKL +RDMGP +RC G  VPPPQ FQ PLP P  +KPD   ++ V KA+   L T  S++  D   GKP Y AL  TLA+QC  +FR TDY GGCN ARI+FSPQKDW  N
Sbjct:   64 DAVKADLKALFLDSKDSWPADFGNYGPLMIRMAWHCAGTYRQSDGRGGCDGGRQRFDPERSWADNVNLDKARGLLWPIKQKYGNALTWGDLIILAGDAAIESMGGPILGFCAGRVDDADGTASLPLGPSLDQEMVAPCSVNGECEAPLGASTMSLIYVNPEGPMAVPDPELSAPQIREVFGRMSMNDSETVALIGGGHAFGKVHGACPTGPGPSPAQQPWNPWPGTCG--EGPMKGKGNNTFTSGFEGPWTTNPIRWDNEYFQNLLKYDWEVHVGPGGHHQWRPVNKDASDP--DPVANIMMLTTDVALLKDPIYLELVKLFAANQTALDIAFSHAWYKLVTRDMGPYSRCLGDQVPPPQPFQAPLPPPPATKPD---FKAVEKAITKALRTASSALPADMVGGKPYYGALFATLAWQCASNFRQTDYTGGCNGARIRFSPQKDWPQN 504          
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Match: A0A8J4G544_9CHLO (PEROXIDASE_4 domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4G544_9CHLO)

HSP 1 Score: 586 bits (1510), Expect = 2.100e-202
Identity = 284/446 (63.68%), Postives = 332/446 (74.44%), Query Frame = 1
Query:   10 LEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGCDGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVAIKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLGTGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHAFGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGAWTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPDIVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPATRCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVPDTFNGKPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAIN 1347
            ++AD++ L  DSQ+ WPADF +YG LMIR+AWHC+GSYR SDGRGGCDG R RF+PERSW DNTNLDKA  LL P+K KYG+A+SWGDL+ L G  AI+SMGGP +GFCAGR DD  G ASL LGP+ +QE VAPC  NG CEAPLG  T+ LIYVNPEG + +P+P  S   IREVF RM MND+ETVALIGGGHAFGK HG C TGPGP+P E P  PWPGTCG  +    G G NTFTSGFEG WT  P  WDNEYF++LL+Y+WE  IGPGG  QW PV KP   + EDE+PDI+MLT+DVALL D  YLE+V  FA NQ +LD+AFS+AWYKL +RDMGP +RC G  VPPPQ FQ+PLP P +   D   Y+ +TKA+   L T   ++V D  NGKP Y AL  TLA+QC  SFR TDY GGCN ARI+F+PQKDW  N
Sbjct:   65 VKADLKALFVDSQESWPADFGHYGPLMIRMAWHCAGSYRLSDGRGGCDGARQRFDPERSWADNTNLDKARGLLWPIKEKYGEALSWGDLMILAGDTAIESMGGPILGFCAGRIDDTDGTASLPLGPSLDQEMVAPCSVNGECEAPLGASTMSLIYVNPEGPLAVPDPELSAPQIREVFARMAMNDSETVALIGGGHAFGKTHGACPTGPGPSPAEQPWNPWPGTCG--NGTMKGKGNNTFTSGFEGPWTTNPIRWDNEYFQNLLKYDWEVYIGPGGHHQWEPVRKP-GADPEDELPDIIMLTTDVALLKDPIYLELVKLFAANQTALDIAFSHAWYKLVTRDMGPYSRCLGNQVPPPQPFQSPLPPPPSVTLD---YKAITKAITKALRTVSPAIVGDQVNGKPYYGALFATLAWQCASSFRQTDYTGGCNGARIRFAPQKDWPQN 504          
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Match: A0A8J4B542_9CHLO (PEROXIDASE_4 domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B542_9CHLO)

HSP 1 Score: 582 bits (1501), Expect = 5.340e-201
Identity = 282/446 (63.23%), Postives = 328/446 (73.54%), Query Frame = 1
Query:   10 LEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGCDGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVAIKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLGTGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHAFGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGAWTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPDIVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPATRCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVPDTFNGKPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAIN 1347
            ++AD++ L  DSQ+ WPADF +YG LMIR+AWHC+GSYR SDGRGGCDG R RF+PERSW DN NLDKA  LL P+K KYGDA+SWGDLI L G  AI+SMGGP +GFCAGR DD  G ASL LGP+ +QE VAPC  NG CEAPLG  T+ LIYVNPEG + +P+P  S   IREVF RM MND+ETVALIGGGHAFGK HG C TGPGPNP + P  PWPGTCG  + P  G G NTFTSGFEG WT  P  WDNEYF +LL+Y+W+  +GPGG  QW PV+K E  + ED++PDI+MLT+DVALL D  YLE+V  FA NQ +LD+AFS+AWYKL +RDMGP +RC G  VPPPQ FQ PLP P    PD   Y+ VTKA+   L     ++  D  NGKP Y AL  TLA+QC  SFR TDY GGCN ARI+ +PQKDW  N
Sbjct:   67 VKADLKALFVDSQESWPADFGHYGPLMIRMAWHCAGSYRLSDGRGGCDGARQRFDPERSWADNVNLDKARGLLWPIKQKYGDALSWGDLIILAGDTAIESMGGPILGFCAGRIDDADGAASLPLGPSLDQEMVAPCSVNGECEAPLGASTMSLIYVNPEGPLAVPDPELSAPQIREVFSRMAMNDSETVALIGGGHAFGKTHGACPTGPGPNPMQQPWNPWPGTCG--EGPMKGKGNNTFTSGFEGPWTTNPIRWDNEYFVNLLKYDWKVYVGPGGHHQWEPVLK-EDADPEDDLPDIIMLTTDVALLKDPIYLELVKLFAANQTALDIAFSHAWYKLVTRDMGPYSRCLGDQVPPPQPFQAPLPPPPAKIPD---YKAVTKAITKALRVISPALPYDPVNGKPYYGALFATLAWQCASSFRQTDYTGGCNGARIRLAPQKDWPQN 506          
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Match: A0A8J4GQV7_9CHLO (PEROXIDASE_4 domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GQV7_9CHLO)

HSP 1 Score: 583 bits (1502), Expect = 1.170e-200
Identity = 282/448 (62.95%), Postives = 331/448 (73.88%), Query Frame = 1
Query:    4 DTLEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGCDGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVAIKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLGTGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHAFGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGAWTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPDIVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPATRCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVPDTFNGKPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAIN 1347
            D ++AD++ L  DS+D WPADF +YG LMIR+AWHC+G+YRQSDGRGGCDGGR RF+PERSW DN NLDKA  LL P+K KYG+A++WGDLI L G  AI+SMGGP +GFCAGR DD  G ASL LGP+ +QE VAPC  NG CEAPLG  T+ LIYVNPEG M +P+P  S   IREVF RM MND+ETVALIGGGHAFGK HG C TGPGP+P E P  PWPGTCG  +    G G NTFTSGFEG WT  P  WDNEYF++LLEY+WE  IGPGG  QWRPV K  S++  + + +I+MLT+DVALL D +YLE+V  FA NQ +LD+AFS+AWYKL +RDMGP +RC G +VPPPQ FQ PLP P   KPD   Y+ V       L T  S++  DT  GKP Y AL  TLA+QC  +FR TDY GGCN ARI+F+PQKDW  N
Sbjct:  101 DAVKADLKALFVDSKDSWPADFGHYGPLMIRMAWHCAGTYRQSDGRGGCDGGRQRFDPERSWADNVNLDKARGLLWPIKQKYGNALTWGDLIILAGDAAIESMGGPILGFCAGRIDDADGTASLPLGPSLDQEMVAPCSVNGDCEAPLGASTMSLIYVNPEGPMAVPDPEKSAPQIREVFARMSMNDSETVALIGGGHAFGKVHGACPTGPGPSPAEQPWNPWPGTCG--NGTMKGKGNNTFTSGFEGPWTTNPIRWDNEYFQNLLEYDWEVHIGPGGHHQWRPV-KKNSSDPSEPVANIMMLTTDVALLKDPSYLELVKLFATNQTALDIAFSHAWYKLVTRDMGPHSRCLGDHVPPPQPFQAPLPPPPAKKPD---YKAVXXXXXXXLRTASSALPGDTVGGKPYYGALFATLAWQCASNFRQTDYTGGCNGARIRFAPQKDWPQN 542          
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Match: K3X7P5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7P5_GLOUD)

HSP 1 Score: 570 bits (1470), Expect = 1.370e-196
Identity = 281/454 (61.89%), Postives = 329/454 (72.47%), Query Frame = 1
Query:    1 FDTLEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGCDGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVAIKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLGTGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHAFGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGAWTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPDIVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPATRCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVPDTFNG--KPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAINRGL 1356
            +D ++AD+  L+TDSQDFWPADF +YGGLMIRLAWHC+GSYR SDGRGGCDGGRIRFNPERSW DNTNLDKAL LL P+K KYGD++SWGDLI L G  AI+SMGGP +GFC GR+DD  G  SL+LGPT EQE VAPC  +G C+APLG  T+GLIYVNPEG MG P+P  SV+ IR+ F RMGM+D ETVALIGGGHAFGK HG C TG GP+P +DPV PWPGTCG  + P+ G G NTFTSGFEGAWT  PT W N YF+ L  + WEK IGPG   QWRPV  P++T      P + MLT+D+ALL+D +Y  I T+FA N  SL+ AFS+AWYKLTSRDMGP  RC G NVPP Q FQ PLP      P    +  V K ++ +L T    +  D   G  K    AL   LA+QC  +FR TDY GGCN A+I+FSPQKDW +N G+
Sbjct:   58 YDAVKADLLVLMTDSQDFWPADFGHYGGLMIRLAWHCNGSYRSSDGRGGCDGGRIRFNPERSWADNTNLDKALRLLDPIKTKYGDSLSWGDLIVLAGNTAIESMGGPVLGFCGGRRDDADGTNSLQLGPTAEQEEVAPCEVDGQCKAPLGPTTLGLIYVNPEGPMGNPDPALSVNDIRDTFNRMGMDDRETVALIGGGHAFGKTHGACPTGAGPDPKQDPVNPWPGTCG--EGPSKGKGNNTFTSGFEGAWTFTPTKWGNGYFRGLTNFQWEKFIGPGSHNQWRPV--PDTT------PPVRMLTADIALLHDPSYKAIATEFASNLTSLNEAFSHAWYKLTSRDMGPVARCRGNNVPPAQPFQNPLPAAPAQLP---KFEAVRKQIKNLLTTAVVGLTSDQNCGGNKVYNGALFVNLAWQCASTFRLTDYAGGCNGAKIRFSPQKDWPLNAGM 498          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8896.16777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6M6_ECTSI9.350e-22868.14Catalase decomposes hydrogen peroxide to molecular... [more]
A0A6H5JXZ4_9PHAE1.270e-22167.92KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7J0_ECTSI1.070e-21966.15Catalase is an enzyme, present in all aerobic cell... [more]
D7G523_ECTSI1.650e-21968.14PEROXIDASE_4 domain-containing protein n=1 Tax=Ect... [more]
D8LN39_ECTSI1.910e-21465.27Catalase is an enzyme, present in all aerobic cell... [more]
A0A8J4F3U4_9CHLO5.220e-20363.39PEROXIDASE_4 domain-containing protein n=1 Tax=Vol... [more]
A0A8J4G544_9CHLO2.100e-20263.68PEROXIDASE_4 domain-containing protein n=1 Tax=Vol... [more]
A0A8J4B542_9CHLO5.340e-20163.23PEROXIDASE_4 domain-containing protein n=2 Tax=Vol... [more]
A0A8J4GQV7_9CHLO1.170e-20062.95PEROXIDASE_4 domain-containing protein n=2 Tax=Vol... [more]
K3X7P5_GLOUD1.370e-19661.89Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8896contigH-paniculata_contig8896:3211..6043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score649.0
Seed ortholog evalue1.6e-183
Seed eggNOG ortholog2880.D7G523
Preferred namekatG
KEGG rclassRC00034,RC00213,RC00767,RC02141
KEGG koko:K03782
KEGG ReactionR00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906
KEGG Pathwayko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009636,GO:0009987,GO:0009991,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019953,GO:0020037,GO:0022414,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034599,GO:0034605,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042594,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0071496,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748
EggNOG free text desc.catalase activity
EggNOG OGs2QTDY@2759,COG0685@1
EC1.11.1.21
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons5
Model size1356
Cds size1356
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8896.16777.1prot_H-paniculata_contig8896.16777.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8896 3211..6043 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931112.5515954-CDS-H-paniculata_contig8896:3210..36301622931112.5515954-CDS-H-paniculata_contig8896:3210..3630Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8896 3211..3630 -
1691481595.7337923-CDS-H-paniculata_contig8896:3210..36301691481595.7337923-CDS-H-paniculata_contig8896:3210..3630Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8896 3211..3630 -
1622931112.570059-CDS-H-paniculata_contig8896:3879..41401622931112.570059-CDS-H-paniculata_contig8896:3879..4140Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8896 3880..4140 -
1691481595.7574165-CDS-H-paniculata_contig8896:3879..41401691481595.7574165-CDS-H-paniculata_contig8896:3879..4140Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8896 3880..4140 -
1622931112.582845-CDS-H-paniculata_contig8896:4344..45991622931112.582845-CDS-H-paniculata_contig8896:4344..4599Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8896 4345..4599 -
1691481595.7673032-CDS-H-paniculata_contig8896:4344..45991691481595.7673032-CDS-H-paniculata_contig8896:4344..4599Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8896 4345..4599 -
1622931112.5954669-CDS-H-paniculata_contig8896:4911..51181622931112.5954669-CDS-H-paniculata_contig8896:4911..5118Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8896 4912..5118 -
1691481595.7778685-CDS-H-paniculata_contig8896:4911..51181691481595.7778685-CDS-H-paniculata_contig8896:4911..5118Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8896 4912..5118 -
1622931112.6231656-CDS-H-paniculata_contig8896:5830..60431622931112.6231656-CDS-H-paniculata_contig8896:5830..6043Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8896 5831..6043 -
1691481595.7951725-CDS-H-paniculata_contig8896:5830..60431691481595.7951725-CDS-H-paniculata_contig8896:5830..6043Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8896 5831..6043 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8896.16777.1

>prot_H-paniculata_contig8896.16777.1 ID=prot_H-paniculata_contig8896.16777.1|Name=mRNA_H-paniculata_contig8896.16777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=452bp
FDTLEADIETLLTDSQDFWPADFCNYGGLMIRLAWHCSGSYRQSDGRGGC
DGGRIRFNPERSWGDNTNLDKALTLLQPLKLKYGDAVSWGDLIALTGTVA
IKSMGGPTIGFCAGRQDDDSGFASLELGPTPEQEAVAPCPENGICEAPLG
TGTVGLIYVNPEGVMGIPEPVNSVDAIREVFGRMGMNDTETVALIGGGHA
FGKFHGPCTTGPGPNPTEDPVTPWPGTCGKPDSPNFGIGRNTFTSGFEGA
WTVEPTVWDNEYFKDLLEYNWEKEIGPGGRFQWRPVVKPESTEREDEIPD
IVMLTSDVALLYDRTYLEIVTDFAENQDSLDVAFSNAWYKLTSRDMGPAT
RCAGPNVPPPQDFQTPLPEPSTSKPDPDMYRKVTKAVEGVLDTEDSSVVP
DTFNGKPSYAALLTTLAFQCMDSFRSTDYLGGCNSARIQFSPQKDWAINR
GL
back to top

mRNA from alignment at H-paniculata_contig8896:3211..6043-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8896.16777.1 ID=mRNA_H-paniculata_contig8896.16777.1|Name=mRNA_H-paniculata_contig8896.16777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2833bp|location=Sequence derived from alignment at H-paniculata_contig8896:3211..6043- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTGACACTCTCGAGGCCGATATCGAGACCCTCCTCACCGACTCGCAGGA CTTTTGGCCCGCTGATTTCTGCAACTACGGAGGCCTCATGATCCGCCTGG CGTGGCACTGCTCAGGGAGCTACCGCCAGTCTGATGGCCGTGGCGGCTGT GACGGTGGCCGTATCCGCTTTAACCCTGAGCGTAGCTGGGGAGATAACAC CAATTTGGACAAGGTACAGGAGATGAGATGTACAGTAATATTATCGTCGA TAAACGACTAGAGTCTCATAGTATAGGAAGGGTAAATTAATACCAAGAAG TAGGGTAGTCGGCTACGGTAGGGGGGGGCGGGGGGCTTGAGCCACTTCTT CAACGAACGACCGTCTCGAAAAGCGGGGTTAAAAACTCTGCAATCCAAAC CACTTCAGGCTTTTCAATGGCGCGCGTTCACGCACTCTAGACGCACACTA TGCGTTATTCGGAATGGCCGTACTGATCAAGGGGTAGAACGCAATGTGCC GAGGGGCTTTCAAAAGTGGCCCAAAACGTTAAAAAAGCGGCTCAGCAACC CCCCCACCCCCCCGATTACCATAGCCCGACTCGGAATTACTTCTATTTCC CCGCGATTGAGCGTTTCGTGTTCACTGTATCAGAGCTACAAAGAGAAGGC GGGTGTGTTCATCTTGGGTACTTTGAAGTAAGTATTTGCCAGGTCTCGTC ATTGTTCTCGTCAATAAAGTGTAACCGTGTACACTGCAGAAATCAAGGTG GCTGGCGGGTGCCAGTGTTGACCGAGCGATTTATTATTATGGGCGATCTC ACCTTTCCCGCTGAACTAGGGAGGTTAGAGATATTCCGTTCCTCTTGTCA AGCAATCAGTTGCCCGAATGTGTCACACAAGACCTCAATCGTTTTCCGGT TGCTGTTTCGTGGTTGGTCCTTCAGGCCCTTACCCTTCTCCAGCCCCTCA AGCTCAAGTATGGCGATGCTGTCTCATGGGGTGATCTCATTGCACTCACT GGCACTGTGGCTATCAAATCTATGGGTGGCCCCACCATCGGCTTCTGTGC CGGTCGTCAGGATGACGACTCGGGGTTCGCTAGTCTCGAGCTCGGCCCCA CCCCTGAGCAGGAGGCCGTTGCGCCGTGCCCGGTAAGAAAAACTCTCGTC TAATTGTCGATAGATCTTTTTCTCGTAAGGACGACTAGGCGCACCACTTT CTTCACACTTATACGTGTGTCGACGCTCACGATCGTTTTTCAATGATGCC CTTCTCTTTTACATGTTTCAGAGATGGTGATTTCAAGTGTCAGCGTAGAT CTATTTCTACTTGTTGTGTAACTCTCTCTGTTCTACATGATACGTAGGAG GAATGGAATATTTGCTCATACCCTGAACCTCCCTGCGACCTCTCACACAC CCTGTTGCCATACTTCCGCCCCACGCCCCGTTCCCATCACGCAGGAGAAC GGAATTTGCGAGGCACCCTTGGGCACCGGTACTGTCGGTCTCATCTATGT AAATCCCGAGGGTGTGATGGGGATTCCCGAGCCCGTGAACAGCGTGGACG CCATCCGTGAGGTGTTCGGCCGTATGGGAATGAACGACACCGAGACCGTG GCTCTCATCGGCGGTGGGCACGCGTTTGGCAAGTTCCACGGTCCGTGCAC CACCGGACCTGGTCCCAACCCTACCGAAGACCCAGTCACTCCGTGGCCGG TACGATCACCAATTATGGTGTAGAGCTAAACCTTCTCGAGAGTAATGTCT GCGCGCTTACAATACAACTAACTCTGATGCAAAGGGACACGTCAGGTAAC CCGGTTCTCCTTTCCAAGAACATGCATACGTTTCCCATGCTCGATTGCGT TATGCTCAGTCCTCTTGCATTCAATGCTGTGTTGTGATATCTGCACTACA CAGGGAACTTGCGGCAAGCCCGACTCTCCCAACTTCGGCATTGGACGGAA CACGTTCACCAGCGGATTTGAGGGCGCCTGGACTGTGGAGCCTACGGTGT GGGACAACGAGTACTTCAAAGACTTGTTGGAGTACAACTGGGAGAAGGAA ATTGGACCCGGTGGTCGCTTCCAATGGAGACCTGTAGTCAAGCCTGAGTC TACCGAGCGTGAGGACGAAATCCCTGACATAGTCATGCTCACATCGGACG TCGCACTTCTTTATGTGAGACTTCAGTCCCTGCGCTACAACCCTAGTACA GATTATTCGATTGTCAAGTCTTATCAGATGGAGAGTTTATGGTGAATGTT GTTGTGAGTTTCGGTACGAGGGCTTGGTGAGGCTTATTTGATTGGCCCCG GTTAGTAATGCCTAGCAATTGGTTTGATGGTGAAGGTACCAATCAATCAC ATCAAGATTTCGGTGATGAAAAAAATATCGACAATATTCCCGTCCTTATT TCATACATTTCAGGACCGCACCTATCTGGAGATCGTAACTGATTTTGCCG AGAACCAAGACAGCCTTGACGTAGCCTTTTCCAACGCCTGGTACAAGCTC ACGTCGCGTGACATGGGACCCGCCACTCGTTGCGCGGGCCCCAACGTCCC GCCCCCCCAAGACTTCCAGACGCCCCTTCCCGAGCCATCTACTTCCAAAC CGGACCCCGACATGTACCGCAAAGTGACGAAGGCGGTTGAAGGAGTTTTG GATACGGAGGATTCCTCCGTCGTCCCAGACACCTTCAACGGTAAGCCTTC GTACGCAGCGCTGCTCACCACCCTCGCGTTCCAGTGCATGGACAGCTTCC GCTCTACTGACTACCTCGGAGGCTGCAACAGCGCCAGGATCCAGTTCTCT CCCCAGAAAGACTGGGCCATCAACAGAGGCCTG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig8896:3211..6043-

>mRNA_H-paniculata_contig8896.16777.1 ID=mRNA_H-paniculata_contig8896.16777.1|Name=mRNA_H-paniculata_contig8896.16777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2712bp|location=Sequence derived from alignment at H-paniculata_contig8896:3211..6043- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTGACACTCTCGAGGCCGATATCGAGACCCTCCTCACCGACTCGCAGGA
CTTTTGGCCCGCTGATTTCTGCAACTACGGAGGCCTCATGATCCGCCTGG
CGTGGCACTGCTCAGGGAGCTACCGCCAGTCTGATGGCCGTGGCGGCTGT
GACGGTGGCCGTATCCGCTTTAACCCTGAGCGTAGCTGGGGAGATAACAC
CAATTTGGACAAGTTTGACACTCTCGAGGCCGATATCGAGACCCTCCTCA
CCGACTCGCAGGACTTTTGGCCCGCTGATTTCTGCAACTACGGAGGCCTC
ATGATCCGCCTGGCGTGGCACTGCTCAGGGAGCTACCGCCAGTCTGATGG
CCGTGGCGGCTGTGACGGTGGCCGTATCCGCTTTAACCCTGAGCGTAGCT
GGGGAGATAACACCAATTTGGACAAGGCCCTTACCCTTCTCCAGCCCCTC
AAGCTCAAGTATGGCGATGCTGTCTCATGGGGTGATCTCATTGCACTCAC
TGGCACTGTGGCTATCAAATCTATGGGTGGCCCCACCATCGGCTTCTGTG
CCGGTCGTCAGGATGACGACTCGGGGTTCGCTAGTCTCGAGCTCGGCCCC
ACCCCTGAGCAGGAGGCCGTTGCGCCGTGCCCGGCCCTTACCCTTCTCCA
GCCCCTCAAGCTCAAGTATGGCGATGCTGTCTCATGGGGTGATCTCATTG
CACTCACTGGCACTGTGGCTATCAAATCTATGGGTGGCCCCACCATCGGC
TTCTGTGCCGGTCGTCAGGATGACGACTCGGGGTTCGCTAGTCTCGAGCT
CGGCCCCACCCCTGAGCAGGAGGCCGTTGCGCCGTGCCCGGAGAACGGAA
TTTGCGAGGCACCCTTGGGCACCGGTACTGTCGGTCTCATCTATGTAAAT
CCCGAGGGTGTGATGGGGATTCCCGAGCCCGTGAACAGCGTGGACGCCAT
CCGTGAGGTGTTCGGCCGTATGGGAATGAACGACACCGAGACCGTGGCTC
TCATCGGCGGTGGGCACGCGTTTGGCAAGTTCCACGGTCCGTGCACCACC
GGACCTGGTCCCAACCCTACCGAAGACCCAGTCACTCCGTGGCCGGAGAA
CGGAATTTGCGAGGCACCCTTGGGCACCGGTACTGTCGGTCTCATCTATG
TAAATCCCGAGGGTGTGATGGGGATTCCCGAGCCCGTGAACAGCGTGGAC
GCCATCCGTGAGGTGTTCGGCCGTATGGGAATGAACGACACCGAGACCGT
GGCTCTCATCGGCGGTGGGCACGCGTTTGGCAAGTTCCACGGTCCGTGCA
CCACCGGACCTGGTCCCAACCCTACCGAAGACCCAGTCACTCCGTGGCCG
GGAACTTGCGGCAAGCCCGACTCTCCCAACTTCGGCATTGGACGGAACAC
GTTCACCAGCGGATTTGAGGGCGCCTGGACTGTGGAGCCTACGGTGTGGG
ACAACGAGTACTTCAAAGACTTGTTGGAGTACAACTGGGAGAAGGAAATT
GGACCCGGTGGTCGCTTCCAATGGAGACCTGTAGTCAAGCCTGAGTCTAC
CGAGCGTGAGGACGAAATCCCTGACATAGTCATGCTCACATCGGACGTCG
CACTTCTTTATGGAACTTGCGGCAAGCCCGACTCTCCCAACTTCGGCATT
GGACGGAACACGTTCACCAGCGGATTTGAGGGCGCCTGGACTGTGGAGCC
TACGGTGTGGGACAACGAGTACTTCAAAGACTTGTTGGAGTACAACTGGG
AGAAGGAAATTGGACCCGGTGGTCGCTTCCAATGGAGACCTGTAGTCAAG
CCTGAGTCTACCGAGCGTGAGGACGAAATCCCTGACATAGTCATGCTCAC
ATCGGACGTCGCACTTCTTTATGACCGCACCTATCTGGAGATCGTAACTG
ATTTTGCCGAGAACCAAGACAGCCTTGACGTAGCCTTTTCCAACGCCTGG
TACAAGCTCACGTCGCGTGACATGGGACCCGCCACTCGTTGCGCGGGCCC
CAACGTCCCGCCCCCCCAAGACTTCCAGACGCCCCTTCCCGAGCCATCTA
CTTCCAAACCGGACCCCGACATGTACCGCAAAGTGACGAAGGCGGTTGAA
GGAGTTTTGGATACGGAGGATTCCTCCGTCGTCCCAGACACCTTCAACGG
TAAGCCTTCGTACGCAGCGCTGCTCACCACCCTCGCGTTCCAGTGCATGG
ACAGCTTCCGCTCTACTGACTACCTCGGAGGCTGCAACAGCGCCAGGATC
CAGTTCTCTCCCCAGAAAGACTGGGCCATCAACAGAGGCCTGGACCGCAC
CTATCTGGAGATCGTAACTGATTTTGCCGAGAACCAAGACAGCCTTGACG
TAGCCTTTTCCAACGCCTGGTACAAGCTCACGTCGCGTGACATGGGACCC
GCCACTCGTTGCGCGGGCCCCAACGTCCCGCCCCCCCAAGACTTCCAGAC
GCCCCTTCCCGAGCCATCTACTTCCAAACCGGACCCCGACATGTACCGCA
AAGTGACGAAGGCGGTTGAAGGAGTTTTGGATACGGAGGATTCCTCCGTC
GTCCCAGACACCTTCAACGGTAAGCCTTCGTACGCAGCGCTGCTCACCAC
CCTCGCGTTCCAGTGCATGGACAGCTTCCGCTCTACTGACTACCTCGGAG
GCTGCAACAGCGCCAGGATCCAGTTCTCTCCCCAGAAAGACTGGGCCATC
AACAGAGGCCTG
back to top