mRNA_H-paniculata_contig8818.16731.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8818.16731.1
Unique NamemRNA_H-paniculata_contig8818.16731.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Match: D8LBE4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBE4_ECTSI)

HSP 1 Score: 743 bits (1917), Expect = 2.100e-263
Identity = 369/550 (67.09%), Postives = 441/550 (80.18%), Query Frame = 1 
Query:    1 MYSSGPNAWLYVAIGTGIAVLLPAVGLLIRKKKVVPEPIDPEDDLLRGDSIVVYFGSQTGTAESFAQILVAEGRRHGFRMRVVDLEDFSAEEMLETGKAIFLVATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYDHYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLVAQFGGKGGVDGVDKAADIPFSVKVLADDEASDYASTPETGAASSTKFYWQGRDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAVAVQRLCAQLDYNPHAVFVIEHSDNHKPIFPSPCTVQDALLRYVDITSIPRRSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILERFSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEGRVYRGICSTFLSKLEPPSITGRAGAAGEDGATTGDGGRPRCNVFVRASTFRLPSNSALPIIMIGPGTGIAPMRALLQERSWQKAQGESVGRNWLYFGCRC 1650
            M SSG +AW Y+    G+  L+P +  L  K+K     I+ E++    D+I VYFGSQTGTAESFAQ + AEGRRHGF + VVDLE+FSA E+LE GKAIFL+ATYGDGEPTDNA+EF TWL N+  EL SDYLAT+ F VFGLGN QY+HYN +G++T+ G+EKL  QRM+ YGEGDDDNQLEEDFEAW+E +W +LV +FGG GGVDGVDKA D+PFSVK+L   EA+ +A   ET AASS+KFYW G DA V+VNRELRA+   VGSTRH+EIDL GT V YHTADNL +LPLNDA   ++LCAQL Y+P + F++EH DNHKP+FP+PCTV+DA LR++DI +IPRRSLLEQL PY+ DD ER+ +  LSSKEG+++YHR VEEPG TLA+LILERFSSLS+ L H LH+VPHLHPRYYTISSSSS+SPSRVHITVAVLEQ+RS+GR+YRGICS+FLS LEP         A  +GAT  DG   +C VFVR STFRLP++S++PIIMIGPGTG+APMRALLQER+WQK QG SVGRN LYFGCRC
Sbjct:    1 MASSGASAWPYI----GLLALVPGLLFLRPKRKPDEADIEEEEEAAPNDTINVYFGSQTGTAESFAQTIAAEGRRHGFHIDVVDLEEFSASELLEKGKAIFLMATYGDGEPTDNASEFTTWLKNESGELESDYLATVEFTVFGLGNTQYEHYNMVGKSTNEGMEKLGAQRMFEYGEGDDDNQLEEDFEAWREKMWMALVMRFGGMGGVDGVDKAVDLPFSVKMLTAAEAACHAGVSETAAASSSKFYWHGCDAPVVVNRELRAQAPGVGSTRHVEIDLQGTSVGYHTADNLAILPLNDATTAEKLCAQLGYDPDSFFILEHDDNHKPVFPTPCTVRDAFLRFMDIMAIPRRSLLEQLTPYVEDDAEREAMHLLSSKEGKEKYHREVEEPGWTLADLILERFSSLSMTLDHFLHVVPHLHPRYYTISSSSSVSPSRVHITVAVLEQDRSQGRLYRGICSSFLSSLEPHD------GATVEGATI-DGSGSKCRVFVRESTFRLPADSSIPIIMIGPGTGVAPMRALLQERAWQKEQGLSVGRNVLYFGCRC 539
[Close]
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Match: D8LBE3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBE3_ECTSI)

HSP 1 Score: 672 bits (1735), Expect = 1.390e-235
Identity = 332/503 (66.00%), Postives = 399/503 (79.32%), Query Frame = 1 
Query:  142 GDSIVVYFGSQTGTAESFAQILVAEGRRHGFRMRVVDLEDFSAEEMLETGKAIFLVATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYDHYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLVAQFGGKGGVDGVDKAADIPFSVKVLADDEASDYASTPETGAASSTKFYWQGRDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAVAVQRLCAQLDYNPHAVFVIEHSDNHKPIFPSPCTVQDALLRYVDITSIPRRSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILERFSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEGRVYRGICSTFLSKLEPPSITGRAGAAGEDGATTGDGGRPRCNVFVRASTFRLPSNSALPIIMIGPGTGIAPMRALLQERSWQKAQGESVGRNWLYFGCRC 1650
            G ++ VYFGSQTGTAE FAQI+ AEG  HGF+  VVDLEDF+ E+     KAIF++ATYGDG+PTDNA+EF   + NK   + S+ L +L++ VFGLGN QY+HYN  GRT    L KL  QRM+ YGEGDDD++LEEDFE WKE +W  LV +FGG GGVDGVDKA D+PFSVK+L + EA+  AST E+ AA ST+F+W   DA V +NRELRA+   VGSTRH+EIDL GT V YHTADNL +LPLNDA   ++LCAQL Y+P + F++EH DNHKP+FP+PCTV+DA LR++DI +IPRRSLLEQL PY+ DD ER+ +  LSSKEG+++YHR VEEPG TLA+LILERFSSLS+ L H LH+VPHLHPRYYTISSSSS+SPSRVHITVAVLEQ+RS+GR+YRGICS+FLS LEP         A  +GAT  DG   +C VFVR STFRLP++S++PIIMIGPGTG+APMRALLQER+WQK QG SVGRN LYFGCRC
Sbjct:   57 GGALTVYFGSQTGTAECFAQIVAAEGIVHGFKTTVVDLEDFNEEQFEGAHKAIFIMATYGDGDPTDNASEFYNLVANKAGGMSSERLRSLHYTVFGLGNTQYEHYNMAGRTMYENLHKLGAQRMFEYGEGDDDHELEEDFEEWKEAMWGVLVKRFGGMGGVDGVDKAVDLPFSVKMLTEHEAAAIASTEESKAACSTRFHWHAVDACVSINRELRAQAPGVGSTRHVEIDLQGTSVGYHTADNLAILPLNDATTAEKLCAQLGYDPDSFFILEHDDNHKPVFPTPCTVRDAFLRFMDIMAIPRRSLLEQLTPYVEDDAEREAMHLLSSKEGKEKYHREVEEPGWTLADLILERFSSLSMTLDHFLHVVPHLHPRYYTISSSSSVSPSRVHITVAVLEQDRSQGRLYRGICSSFLSSLEPHD------GATVEGATI-DGSGSKCRVFVRESTFRLPADSSIPIIMIGPGTGVAPMRALLQERAWQKEQGLSVGRNVLYFGCRC 552
[Close]
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Match: A0A835ZCH5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH5_9STRA)

HSP 1 Score: 460 bits (1184), Expect = 2.140e-152
Identity = 249/505 (49.31%), Postives = 324/505 (64.16%), Query Frame = 1 
Query:  157 VYFGSQTGTAESFAQILVAEGRRHGFRMRVVDLEDFSAEEMLETGKAIFLVATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYDHYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLVAQFGGKGGVDGVDKA-------ADIPFSVKVLADDEASDYASTPETGAASSTKFYWQGRDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAVAVQRLCAQLDYNPHAVFVIEH-SDNHKPIFPSPCTVQDALLRYVDITSIPRRSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILERFSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEGRVYRGICSTFLSKLEPPSITGRAGAAGEDGATTGDGGRPRCNVFVRASTFRLPSNSALPIIMIGPGTGIAPMRALLQERSWQKAQGESVGRNWLYFGCR 1647
            +YFGSQTGTAE FA+ L AEG R GF  +VVDLEDF+  ++ E GKAIF++ATYG+G+PTDNA  F  WL   G +  S     L +  FGLGN+QY+HYN  G+ T  GL +   + M+ YGEGDDD  LE+DFEAWKE +W ++  +  G    +    A       A++PF++  L++ EA+  A TPE  AA+ST++YWQGR ATV+VNRELRA  E  GSTRH+E+ LDGTD+ Y TADN VVLP N A AV+ L     Y     F IEH S   K  FP+PCTV++AL RYVD+  +PR+  +E+L  +  D  ER  L +L S+  R E+   V +  RTLAEL+   F S  +PL HLLH VPHL PR YTI+SS++  P  VH+TVA+L ++R  GR + G+C+  L+ LE P    RA                     VRASTFRLP++ A+PII++GPGTGIAPMRALLQER  ++A+G ++    LYFGCR
Sbjct:   65 IYFGSQTGTAEGFAKTLAAEGARKGFNTQVVDLEDFNEFQLAEAGKAIFIMATYGEGDPTDNAMAFMDWLKQAGKDA-SLASTGLRYTAFGLGNRQYEHYNRTGKATHAGLAEAGAELMFEYGEGDDDGTLEDDFEAWKEKMWAAVAPEAEGVPSFEADAAAPPEALLLAELPFALHFLSNAEAAALAPTPEYEAAASTRYYWQGRSATVVVNRELRAWTEDGGSTRHVEVSLDGTDLAYETADNFVVLPENPADAVEALAQAQGYRLDQWFTIEHGSGGDKAAFPTPCTVREALTRYVDVCGVPRKGTVERLAAFAADPAERARLARLVSRGARDEFRAFVTDARRTLAELLTRDFRSARVPLAHLLHAVPHLQPREYTIASSAAAHPRAVHLTVALLREDRGGGRRFHGLCTRHLAALEAPGAPLRA--------------------LVRASTFRLPADDAVPIILVGPGTGIAPMRALLQERRHRRARGAAI----LYFGCR 544
[Close]
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Match: H3G950_PHYRM (NADPH--hemoprotein reductase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G950_PHYRM)

HSP 1 Score: 426 bits (1095), Expect = 4.290e-139
Identity = 243/524 (46.37%), Postives = 333/524 (63.55%), Query Frame = 1 
Query:  142 GDSIVVYFGSQTGTAESFAQILVAEGRRHGFRMRVVDLEDFSAEEMLETGKAI-FLVATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYDHYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLVAQFGGK-----GGVDGVD----KAADIPFSVKVLADDEASDYASTPETGAASSTKFYWQGRDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAVAVQRLCAQLDYNPHAVFVIE--HSDNHKPI-FPSPCTVQDALLRYVDITSIPRRSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILERFSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEGRVYRGICSTFLSKLEPPSI-----TGRAGAAGEDGATTGDGGRPR----CNVFVRASTFRLPSNSALPIIMIGPGTGIAPMRALLQERSWQKAQGESVGRNWLYFGCR 1647
            G  + + FGSQTGTAE FA+ L  EGR+ GF+   +DLED+ A E L+    I F++ATYG+G+PTDNA +F  +L +K   L  + L+ + + VFGLGN QY+HYN MGR  D+ ++K   QR++ YGEGDDD  L+EDF+ WKE LW +L  QF G+     G   G D     A +  + V  +   EA   A   +  A  STK ++  + A V+VNRELR   E  GST H+E+DL GT VTYHTADNL VLP N+   V+RL  +L Y+      ++   SD H  + FPSPCT+++ L RY+ + S PR+  L+QL  +  D  ER  L +L+SKEG++EY   + E  R+  + +LE F S+ + +Q LL+IVP L PRYYTISSSS ++P RVH TV+++E  +S+GRV+RG+CST+L +L+P  +       R    GE G+      +PR      +F+RASTFRLP N   PII+IGPGTGIAPMRA LQER+ Q+  G +VG++ +YFGCR
Sbjct:   25 GGRVAILFGSQTGTAEGFAEALKKEGRKAGFQTLAIDLEDYDAAEKLKDETCIIFVMATYGEGDPTDNAVDFIDFLKDKDGNLDENALSGVGYTVFGLGNTQYEHYNEMGRLVDKLMDKHGAQRVFHYGEGDDDASLDEDFDDWKEPLWKALKKQFIGEETEENGAATGKDGEKMTAPEYEYQVVEIRASEAQKAAKDVKMKA--STKHFFTAKSAKVVVNRELRPSTEG-GSTVHVELDLRGTGVTYHTADNLAVLPENETSVVERLAKRLGYDLDQWVSVQPVSSDAHGELPFPSPCTIEEILTRYLAVNSAPRKGPLKQLAFFASDSAERAQLERLASKEGKEEYQTWILEDERSFVD-VLEHFRSVKMSMQGLLYIVPFLLPRYYTISSSSLVNPQRVHATVSLIESSKSDGRVFRGVCSTYLGRLQPLDLHTDDKKKRDSRPGEQGSK-----KPREWPAARIFMRASTFRLPENPLTPIILIGPGTGIAPMRAFLQERAKQQQDGVTVGKSIMYFGCR 539
[Close]
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Match: W7TT06_9STRA (Nadph--cytochrome p450 reductase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT06_9STRA)

HSP 1 Score: 417 bits (1073), Expect = 1.880e-135
Identity = 255/580 (43.97%), Postives = 347/580 (59.83%), Query Frame = 1 
Query:   46 TGIAVLLPA---VGLLIRK--KKVVPEPIDPEDDLLRG--------------DSIVVYFGSQTGTAESFAQILVAEGRRHGFRMRVVDLEDFSAEEMLETGKAIFLVATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYDHYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLV--AQFGGKGGVDGVDKAADIP-------FSVKVL--------------ADDEASDYAST---PETGAASSTKFYWQGRDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAVAVQRLCAQLDYNPHAVFVIEHSDNHKPIFPSPCTVQDALLRYVDITSIPRRSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILERFSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEGRVYRGICSTFLSKLEPPSITGRAGAAGEDGATTGDGGRPRCNVFVRASTFRLPSNSALPIIMIGPGTGIAPMRALLQERSWQK-AQGESVGRNWLYFGCR 1647
            T +A LL A   V LL+ +  +K  P P+DP++    G               +I +YFGSQTGTAE FA+ L  E  R+GF  RVVDLE F  E++  T  AIFL+ATYG+G+PTDNA  F+ WL N+ DEL    L  L +AVFGLG+ QY+HYN MG+   + L+ L  + +   G GD+   +EEDFE W EGLW      A   G+     + + A++P       F++K+L                  AS+ A      E+   +STKFY+   +  V+ NRELR+  +  GSTRH+E+DL G+ +TY TADNL VLP N A  V+ +     Y+  A+F +      K  FP+PCTV+DAL  Y+D+  +PRR+ L QL  + +  +E + ++ L+SK+GR+EY+R V + GR+LAELI E F S+ +PLQHL+++ PHL PRYYTISSSSS+ PS+VH TVAV + E   GRV+ G+CS++L+    PS                     R  +F+R S+FRLP +SA PII+IGPGTGIAPMRALLQER +Q+ A G+ VG   LYFGCR
Sbjct:   11 TVLAALLTASTAVALLVTRFVRKAPPLPLDPKEGPRTGRVTRNSVEAGSFPNGAIDIYFGSQTGTAEGFAKGLAREASRYGFEGRVVDLETFEPEKLQATSLAIFLLATYGEGDPTDNAMAFSKWLRNEDDELSEQALGGLKYAVFGLGSTQYEHYNKMGKVAHQRLQDLGARPVVDLGLGDE-LTVEEDFERWSEGLWSEFTQAAIEMGRSDTVAIVEPAEVPAQGEQLDFTLKLLPTKGLLGRSTGKEKVGPSASNGAGVVKLDESKIQASTKFYFHNHEVAVLTNRELRSPRDG-GSTRHVELDLAGSGLTYATADNLAVLPENPAAVVEAVAGGQGYDLDALFDMVCE---KAKFPTPCTVRDALTLYLDLCGLPRRTTLGQLAAFALSAKEAERMKFLASKQGREEYNRFVVQEGRSLAELITESFPSVRLPLQHLINLAPHLQPRYYTISSSSSVYPSQVHATVAVTKDEPRPGRVHWGVCSSYLAA---PSTQ-------------------RVRIFIRPSSFRLPVDSATPIILIGPGTGIAPMRALLQERRYQRQAAGKEVGETLLYFGCR 563
[Close]
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Match: A0A0P1A561_PLAHL (Nadph-cytochrome p450 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A561_PLAHL)

HSP 1 Score: 418 bits (1074), Expect = 2.000e-135
Identity = 250/583 (42.88%), Postives = 345/583 (59.18%), Query Frame = 1 
Query:   31 YVAIGTGIAVLLPAV--------------------GLLIRKKKVVPEPIDP-------EDDLLRGDSIVVYFGSQTGTAESFAQILVAEGRRHGFRMRVVDLEDFSAEEMLETGKAIFLV-ATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYDHYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLVAQFGGKGGVD--GVDKA--ADIPFSVKVLADDEASDYASTPETGAASSTKFYWQGRDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAVAVQRLCAQLDYNPHAVFVIEHSDNHKPI---FPSPCTVQDALLRYVDITSIPRRSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILERFSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEGRVYRGICSTFLSKLEPPSITG-----RAGAAGEDGATTGDGGRPR----CNVFVRASTFRLPSNSALPIIMIGPGTGIAPMRALLQERSWQKAQGESVGRNWLYFGCR 1647
            YV +GT +AVL  AV                    GL ++  K   EP          E     G  + + FGSQTGTAE FA IL  EGR+ GF+   +DLE++   + L   K + L+ ATYG+G+PTDNA  F ++L NK   L S  L  ++F VFGLGN QY+HYN MGR+TD+ +EK    R++ YGEGDDD+ L+EDF+ WKEGLW +L  QF      +   V K+  + I +  +++            +    +STK ++  +DA ++VNRELR   E  GST H+E+DL GT +TY TADNL VLP N+   V+ +   LD++     +++   + +     FPSPCTV+D L+RY+ I S PR+  L+QL  +  D  ER  L +L+SK+G+ EY + + E  R+  + +LE F S+ + ++ LLHIVP L PRYYTISSSS ++P RVH TV+V+E  +   RV+RG+CST+LS+L+P  +       R    GE GA      +PR      +F+RASTFRLP N   PI++IGPGTGIAPMRA LQER  Q+  G  VG++ LYFGCR
Sbjct:    5 YVVLGTLLAVLATAVLFLRDSKPKRDKVAEEMLRIGLQMKMYKAAAEPAASTIKSNVEESPNFPGGRVAILFGSQTGTAEGFADILKKEGRQAGFQTHAIDLENYDVAQKLPDEKLVILIMATYGEGDPTDNAVNFHSFLKNKNASLGSKTLEGVHFTVFGLGNTQYEHYNAMGRSTDKLMEKYGATRVFHYGEGDDDSSLDEDFDDWKEGLWKALREQFIAVSANEDENVHKSGLSPIEYEYELVKIRRPESNTQGNKVKIKASTKHFYTAKDAKIVVNRELRQSIET-GSTVHLELDLRGTGLTYETADNLAVLPENETRVVETVAKCLDFDLDQWVLLKPVTDDRDFEYPFPSPCTVKDILMRYLAINSAPRKGPLKQLAFFASDPVERLALTRLASKDGKDEYQKWILEDERSFVD-VLEHFCSVKVSVRDLLHIVPFLLPRYYTISSSSLVNPQRVHATVSVIESRKENNRVFRGVCSTYLSRLQPLDMHSDEKKKRNSRPGEQGAK-----KPREWPTARIFMRASTFRLPINPLTPIVLIGPGTGIAPMRAFLQERMKQQEDGLHVGKSILYFGCR 580
[Close]
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Match: A0A6A3PE59_9STRA (NADPH--cytochrome P450 reductase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3PE59_9STRA)

HSP 1 Score: 416 bits (1069), Expect = 1.770e-134
Identity = 238/529 (44.99%), Postives = 328/529 (62.00%), Query Frame = 1 
Query:  142 GDSIVVYFGSQTGTAESFAQILVAEGRRHGFRMRVVDLEDFSAEEMLETGK-AIFLVATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYDHYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLVAQF-------GGKGGVDGVD----KAADIPFSVKVLADDEASDYASTPET-GAASSTKFYWQGRDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAVAVQRLCAQLDYNPHAVFVIEHSDNHKPI---------FPSPCTVQDALLRYVDITSIPRRSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILERFSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEGRVYRGICSTFLSKLEPPSI-----TGRAGAAGEDGATTGDGGRPRCNVFVRASTFRLPSNSALPIIMIGPGTGIAPMRALLQERSWQKAQGESVGRNWLYFGCR 1647
            G  + + FGSQTGTAE FA++L  EGR+ GF+   +DLED+ A + L+  +  IF++ATYG+G+PTDNA +F  +L +K   L  + LA + F VFGLGN QY+HYN MGR  DR +E    QRM+ YGEGDDD  L+EDF+ WKE LW ++  QF       G +G    VD     A +  + +  +   EA   A   ++    +STK ++  + A V+VNRELR   +  GST H+E+DL GT VTY TADNL VL  N+   V++L  +LDY+      ++   + KP+         FPSPCTV + L RY+ + S PR+  L+QL  +  D  ER  L +L+SKEG+ EY + + E  R+  + +LE F S+ + +Q LLHIVP L PRYYTISSSS ++P RVH TV+++E ++S+GRV+RG+CS +L +L+P          R    GE G+       P   +F+RASTFRLP N   PII+IGPGTGIAPMRA L ER+ Q+  G  VG++ +YFGCR
Sbjct:   77 GGRVAILFGSQTGTAEGFAEVLKKEGRKAGFQTHAIDLEDYDAAQKLKDERLVIFVMATYGEGDPTDNAVDFVDFLKDKEQVLGDNSLADVKFTVFGLGNTQYEHYNEMGRLVDRLMEAHGAQRMFHYGEGDDDATLDEDFDEWKEPLWKAMRKQFISSDDEQGEEGDAKDVDGETLTAPEYEYELVEIRASEAETLAEAAKSVKMKASTKHFFTAKSAKVVVNRELRPSTDG-GSTVHVELDLRGTGVTYETADNLAVLAENETRVVEQLAKRLDYD------LDQWVSLKPVGEDLNCEYPFPSPCTVGEILTRYLAVNSAPRKGPLKQLAFFASDPTERAELVRLASKEGKDEYQKWIHEDERSFVD-VLEHFRSVKVSVQALLHIVPFLLPRYYTISSSSLVNPQRVHATVSLIESKKSDGRVFRGVCSNYLGRLQPLDAHMDDKKKRDSRPGEQGSKK-PREWPNARIFMRASTFRLPKNPLTPIILIGPGTGIAPMRAFLHERAKQRDDGIEVGKSIMYFGCR 596
[Close]
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Match: A0A3M6VQB0_9STRA (NADPH--cytochrome P450 reductase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQB0_9STRA)

HSP 1 Score: 415 bits (1066), Expect = 4.320e-134
Identity = 239/530 (45.09%), Postives = 332/530 (62.64%), Query Frame = 1 
Query:  142 GDSIVVYFGSQTGTAESFAQILVAEGRRHGFRMRVVDLEDFSAEEMLETGK-AIFLVATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYDHYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLVAQFGGKGGVDGVDK-----------AADIPFSVKVLADDEASDYAS-TPETGAASSTKFYWQGRDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAVAVQRLCAQLDYNPHAVFVIEHSDNHKPI---------FPSPCTVQDALLRYVDITSIPRRSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILERFSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEGRVYRGICSTFLSKLEPPSITGRAGAAGEDGATTGDGG--RPR----CNVFVRASTFRLPSNSALPIIMIGPGTGIAPMRALLQERSWQKAQGESVGRNWLYFGCR 1647
            G  +V+ FGSQTGTAE FA++L  EGR+ GF+   +DLED++A E L   K  IF++ATYG+G+PTDNA +F  +L +K + L  +    + + VFGLGN QY+HYN MGR  D  +EK    R++ YGEGDDD  L+EDF+ WKE LW +L  QF     ++   +           A +  + V  +   EA   A+ T E    +STK ++  +DA V+VNRELR   E  GST H+E+DL GT VTY TADNL VLP N+   V+RL  ++D +      +E   + KP+         FPSPCT+ + L RY+ I S PR+  L+QL  +  D  ER  L +LSSKEG++EY + + E  R+  + +L  F S+ + +Q LLHIVP L PRYYTISSSS ++P RVH TV+++E ++++GRV+RG+CS +L++L+P  +        +     GD G  +PR      +F+RASTFRLP N   PII+IGPGTGIAPMRA LQER+ Q+  G +VG++ +YFGCR
Sbjct:   72 GGRVVILFGSQTGTAEGFAEVLKKEGRKAGFQTHAIDLEDYNAVEKLRNEKLVIFVMATYGEGDPTDNAVDFIKFLKDKENVLGDEAFQQVGYTVFGLGNTQYEHYNEMGRIVDNLMEKHGAHRVFHYGEGDDDASLDEDFDDWKELLWKALRKQFIATEEIENNSEIVKEIQGQTLSAPEYEYQVVEIRASEAKRLANKTKEVKMKASTKHFFTAKDAKVVVNRELRLSTEG-GSTVHVELDLRGTGVTYQTADNLAVLPENETSVVKRLATRMDCD------LEQWVSLKPVDEDLHCEFPFPSPCTIGEILSRYLAINSAPRKGPLKQLAFFASDLVERAHLMRLSSKEGKEEYQKWILEDKRSFVD-VLVHFRSVKVSVQTLLHIVPFLLPRYYTISSSSLVNPQRVHATVSLIESKQNDGRVFRGVCSNYLNRLQP--LVAHMDDKKKRDIRPGDQGFKKPREWPTARIFIRASTFRLPKNPLTPIILIGPGTGIAPMRAFLQERARQQEDGVTVGKSIMYFGCR 591
[Close]
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Match: A0A7S2RX15_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RX15_9STRA)

HSP 1 Score: 408 bits (1049), Expect = 3.650e-133
Identity = 229/476 (48.11%), Postives = 303/476 (63.66%), Query Frame = 1 
Query:  241 RVVDLEDFSAEEMLETGKAIFLVATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYDHYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLVAQF----GGKGGVDGVDKAA--DIPFSVKVLADDEASDYASTPETGAASSTKFYWQGRDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAVAVQRLCAQLDYNPHAVFVIEH-SDNHKPIFPSPCTVQDALLRYVDITSIPRRSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILERFSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEGRVYRGICSTFLSKLEPPSITGRAGAAGEDGATTGDGGRPRCNVFVRASTFRLPSNSALPIIMIGPGTGIAPMRALLQERSWQKAQGESVGRNWLYFGCR 1647
            +VVDLEDF   E+ +   A+FL++TYG+GEPTDNAA F  WL N   EL  + LA +N+ VFGLGN+QY+H+N MG+  D  LEK+ GQR +  G GDD+  +E+DFE WK+ + + LVAQF    G  GG +   + A  +IP  V  +        A        SST+ Y+    ATV VNRELR+  +  GSTRH+E+DL G  V YHTADNL VLP ND  +VQRL A + Y+      +E    + K  FPSP TV  AL  Y DI  IPRRS +   VP+  D  ER  L +L++KEGR  +  +VE+  R+L +++ E F S+ +PL H L + P   PRYYTI+SSSS+ P+ +H+TV+V+ + +  G V+RG+CSTFL +LE P  TGR+               P+C VFVR S+FRLPS++A PII+IGPGTGIAPMRALLQERS+QK++G  VG   LYFGC+
Sbjct:    3 QVVDLEDFEPSEVKDCRLAVFLMSTYGEGEPTDNAASFMKWLKNPDGEL-DNALAGMNYTVFGLGNRQYEHFNRMGKVVDADLEKIGGQRFFTLGLGDDNASIEDDFEQWKDEMINQLVAQFHPSAGDGGGKEDASEVAIPEIPLRVVEIRSKGKVAPAKLSTDHVQSSTRHYFTAATATVAVNRELRSAKDP-GSTRHMELDLTGAKVPYHTADNLAVLPENDDASVQRLAAHMGYDLDQAIKLEGVGPSFKHPFPSPTTVGHALKLYCDIHGIPRRSTVVHFVPFATDPSERSALAELTAKEGRHRFKSLVEDGKRSLLDILTEDFPSMRVPLAHFLVLCPRQQPRYYTIASSSSLHPTSIHLTVSVITEGKPNGGVHRGVCSTFLQRLEVP--TGRSPQL------------PQCQVFVRDSSFRLPSDAATPIILIGPGTGIAPMRALLQERSFQKSRGLPVGETVLYFGCK 462
[Close]
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Match: A0A0W8CIF4_PHYNI (NADPH--cytochrome P450 reductase n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CIF4_PHYNI)

HSP 1 Score: 411 bits (1057), Expect = 7.410e-133
Identity = 238/536 (44.40%), Postives = 323/536 (60.26%), Query Frame = 1 
Query:  103 VPEPIDPEDDLLRGDSIVVYFGSQTGTAESFAQILVAEGRRHGFRMRVVDLEDFSAEEMLETGKAIFLV-ATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYDHYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLVAQFGGKGGVDGVDKAAD-----IPFSVKVLADDEASDYASTPE-TGAASSTKFYWQGRDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAVAVQRLCAQLDYNPHAVFVIEHSDNHKPI---------FPSPCTVQDALLRYVDITSIPRRSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILERFSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEGRVYRGICSTFLSKLEPPSI-----TGRAGAAGEDGATTGDGGRPRCNVFVRASTFRLPSNSALPIIMIGPGTGIAPMRALLQERSWQKAQGESVGRNWLYFGCR 1647
            V +P   E     G  + + FGSQTGTAE FA++L  EGR+ GF+   +DLED+ A   L+  K + L+ ATYG+G+PTDNA +F  +L +    L       ++F VFGLGN QY+HYN MGR TDR +EK   +RM+ YGEGDDD  L+EDF+ WKE LW +L  QF      +  +   D      P     L +    +    PE     +STK ++  + A V+VNRELR   E  GST H+E+DL GT VTY TADNL VLP N+   V+ L  +LD +      ++   + KP+         FPSPCT+ D L RY+ I S PR+  L+QL  +  +  ER  L +LSSKEG+ +Y + V E  R+  + +L  F S+++ ++ LLHIVP L PRYYTISSSS ++P RVH TV+++E ++S+GRV+RG+CS +L +L+P          R    GE G T      P   +F+RASTFRLP N   PII+IGPGTGIAPMRA L ER+ Q+  G +VG++ +YFGCR
Sbjct:   56 VQKPTVEESPAYPGGRVAILFGSQTGTAEGFAEVLKTEGRKAGFQTHAIDLEDYDAASKLKDEKLVILIMATYGEGDPTDNAVDFMDFLKDTAGNLGPKAFEGVHFTVFGLGNTQYEHYNEMGRMTDRLMEKHGAERMFHYGEGDDDASLDEDFDDWKEPLWKALRKQFIAGNIEEDTEVKQDEHKLTSPVYEYELVEIRRPEVEKEPEEVKMKASTKHFFTAKQAKVVVNRELRLSTEG-GSTVHVELDLRGTGVTYETADNLAVLPENETTVVESLATRLDLD------LDQWVSLKPVAEDLHCEFPFPSPCTIGDILTRYLAINSAPRKGPLKQLAYFASNQTERTELVRLSSKEGKDDYQKWVLEDERSFVD-VLTHFRSVNLTVKDLLHIVPFLQPRYYTISSSSLVNPQRVHATVSLIESKKSDGRVFRGVCSNYLGRLQPLEAHTDDKKKRDSRPGEQG-TKKPREWPTARIFMRASTFRLPENPLTPIILIGPGTGIAPMRAFLHERAKQQEDGVTVGKSIMYFGCR 582
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8818.16731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBE4_ECTSI2.100e-26367.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LBE3_ECTSI1.390e-23566.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCH5_9STRA2.140e-15249.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H3G950_PHYRM4.290e-13946.37NADPH--hemoprotein reductase n=1 Tax=Phytophthora ... [more]
W7TT06_9STRA1.880e-13543.97Nadph--cytochrome p450 reductase n=3 Tax=Monodopsi... [more]
A0A0P1A561_PLAHL2.000e-13542.88Nadph-cytochrome p450 n=1 Tax=Plasmopara halstedii... [more]
A0A6A3PE59_9STRA1.770e-13444.99NADPH--cytochrome P450 reductase n=5 Tax=Phytophth... [more]
A0A3M6VQB0_9STRA4.320e-13445.09NADPH--cytochrome P450 reductase n=2 Tax=Peronospo... [more]
A0A7S2RX15_9STRA3.650e-13348.11Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0W8CIF4_PHYNI7.410e-13344.40NADPH--cytochrome P450 reductase n=12 Tax=Phytopht... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8818contigH-paniculata_contig8818:8461..10110 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score751.9
Seed ortholog evalue2.1e-214
Seed eggNOG ortholog2880.D8LBE4
Preferred namecprA
KEGG koko:K00327
Hectar predicted targeting categorysignal anchor
GOsGO:0000003,GO:0000166,GO:0001101,GO:0001505,GO:0003006,GO:0003420,GO:0003674,GO:0003824,GO:0003958,GO:0004128,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005829,GO:0006066,GO:0006082,GO:0006091,GO:0006464,GO:0006473,GO:0006475,GO:0006575,GO:0006577,GO:0006629,GO:0006631,GO:0006694,GO:0006696,GO:0006723,GO:0006725,GO:0006805,GO:0006807,GO:0006950,GO:0006979,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007584,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008589,GO:0008610,GO:0008941,GO:0009055,GO:0009056,GO:0009058,GO:0009410,GO:0009437,GO:0009507,GO:0009536,GO:0009605,GO:0009653,GO:0009698,GO:0009719,GO:0009725,GO:0009737,GO:0009812,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010181,GO:0010243,GO:0010466,GO:0010605,GO:0010646,GO:0010647,GO:0010817,GO:0010893,GO:0010941,GO:0010951,GO:0012505,GO:0016020,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016491,GO:0016651,GO:0016653,GO:0016675,GO:0016705,GO:0016708,GO:0016787,GO:0017144,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019216,GO:0019218,GO:0019222,GO:0019395,GO:0019538,GO:0019748,GO:0019752,GO:0019867,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022603,GO:0022900,GO:0023051,GO:0023056,GO:0030154,GO:0030162,GO:0030258,GO:0030703,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031984,GO:0032268,GO:0032269,GO:0032330,GO:0032332,GO:0032350,GO:0032352,GO:0032354,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032768,GO:0032770,GO:0032787,GO:0032870,GO:0033993,GO:0034440,GO:0034641,GO:0034698,GO:0036094,GO:0036211,GO:0040008,GO:0042126,GO:0042127,GO:0042133,GO:0042135,GO:0042175,GO:0042221,GO:0042335,GO:0042493,GO:0042737,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043154,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043281,GO:0043412,GO:0043434,GO:0043436,GO:0043543,GO:0043602,GO:0044092,GO:0044093,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044270,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045540,GO:0045542,GO:0045595,GO:0045597,GO:0045834,GO:0045861,GO:0045880,GO:0045940,GO:0046165,GO:0046209,GO:0046210,GO:0046620,GO:0046885,GO:0046886,GO:0046889,GO:0046890,GO:0047726,GO:0048037,GO:0048468,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048609,GO:0048638,GO:0048646,GO:0048856,GO:0048869,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050810,GO:0050896,GO:0051094,GO:0051171,GO:0051172,GO:0051213,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051336,GO:0051341,GO:0051346,GO:0051353,GO:0051704,GO:0051716,GO:0052547,GO:0052548,GO:0055114,GO:0060191,GO:0060192,GO:0060255,GO:0060548,GO:0061035,GO:0061036,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0070988,GO:0071310,GO:0071371,GO:0071372,GO:0071375,GO:0071417,GO:0071466,GO:0071495,GO:0071704,GO:0072593,GO:0080090,GO:0090030,GO:0090031,GO:0090181,GO:0090205,GO:0090345,GO:0090346,GO:0097159,GO:0097164,GO:0097305,GO:0097367,GO:0097384,GO:0098588,GO:0098805,GO:0098827,GO:0106118,GO:0106120,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901615,GO:1901617,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902652,GO:1902653,GO:1902930,GO:1902932,GO:1903010,GO:2000026,GO:2000027,GO:2000116,GO:2000117,GO:2001057
EggNOG free text desc.NADPH-hemoprotein reductase activity
EggNOG OGsCOG0369@1,KOG1158@2759
EC1.6.2.4
COG Functional cat.P
BiGG ReactioniMM904.YHR042W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size1650
Cds size1650
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931105.8995793-CDS-H-paniculata_contig8818:8460..101101622931105.8995793-CDS-H-paniculata_contig8818:8460..10110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8818 8461..10110 +
1691481592.9301684-CDS-H-paniculata_contig8818:8460..101101691481592.9301684-CDS-H-paniculata_contig8818:8460..10110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8818 8461..10110 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8818.16731.1prot_H-paniculata_contig8818.16731.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8818 8461..10110 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8818.16731.1

>prot_H-paniculata_contig8818.16731.1 ID=prot_H-paniculata_contig8818.16731.1|Name=mRNA_H-paniculata_contig8818.16731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=550bp
MYSSGPNAWLYVAIGTGIAVLLPAVGLLIRKKKVVPEPIDPEDDLLRGDS
IVVYFGSQTGTAESFAQILVAEGRRHGFRMRVVDLEDFSAEEMLETGKAI
FLVATYGDGEPTDNAAEFATWLDNKGDELPSDYLATLNFAVFGLGNKQYD
HYNFMGRTTDRGLEKLRGQRMYVYGEGDDDNQLEEDFEAWKEGLWDSLVA
QFGGKGGVDGVDKAADIPFSVKVLADDEASDYASTPETGAASSTKFYWQG
RDATVMVNRELRAKGEAVGSTRHIEIDLDGTDVTYHTADNLVVLPLNDAV
AVQRLCAQLDYNPHAVFVIEHSDNHKPIFPSPCTVQDALLRYVDITSIPR
RSLLEQLVPYIVDDRERDTLRQLSSKEGRKEYHRVVEEPGRTLAELILER
FSSLSIPLQHLLHIVPHLHPRYYTISSSSSISPSRVHITVAVLEQERSEG
RVYRGICSTFLSKLEPPSITGRAGAAGEDGATTGDGGRPRCNVFVRASTF
RLPSNSALPIIMIGPGTGIAPMRALLQERSWQKAQGESVGRNWLYFGCRC
back to top

mRNA from alignment at H-paniculata_contig8818:8461..10110+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8818.16731.1 ID=mRNA_H-paniculata_contig8818.16731.1|Name=mRNA_H-paniculata_contig8818.16731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig8818:8461..10110+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTATTCGAGTGGACCGAACGCCTGGTTATATGTTGCAATCGGCACAGG
TATCGCTGTACTCCTACCTGCTGTTGGTCTACTCATACGAAAAAAAAAAG
TTGTGCCAGAACCCATCGACCCAGAAGACGATTTGCTGCGGGGCGACTCC
ATCGTCGTGTACTTCGGCTCTCAGACAGGCACGGCCGAGAGCTTTGCGCA
AATACTCGTTGCTGAGGGTCGTCGGCATGGCTTCCGAATGCGTGTGGTGG
ACTTGGAAGACTTCAGCGCTGAGGAGATGCTCGAAACAGGCAAAGCTATT
TTTCTCGTTGCCACTTATGGTGATGGGGAGCCAACCGACAACGCGGCGGA
ATTCGCCACGTGGCTGGATAACAAGGGCGATGAATTGCCGAGTGATTACC
TCGCTACATTGAATTTCGCCGTGTTTGGCCTAGGCAACAAGCAGTATGAC
CACTACAATTTCATGGGTCGAACAACCGACAGGGGCCTTGAGAAGCTTAG
AGGTCAGCGGATGTACGTATACGGAGAGGGTGACGATGACAACCAGCTCG
AAGAGGACTTCGAGGCGTGGAAGGAGGGGTTGTGGGACTCGTTGGTGGCG
CAATTCGGCGGAAAGGGGGGCGTGGATGGGGTAGATAAGGCTGCAGACAT
TCCTTTTTCGGTGAAGGTACTCGCGGACGACGAAGCGTCGGATTATGCTT
CAACCCCAGAGACTGGTGCAGCTTCTTCCACCAAGTTCTACTGGCAGGGG
CGTGATGCGACCGTTATGGTTAACAGGGAGTTGCGAGCGAAGGGCGAAGC
GGTGGGATCTACGCGCCATATCGAGATTGATCTAGACGGTACCGATGTCA
CATATCACACCGCTGATAACCTGGTCGTTCTGCCACTAAATGATGCAGTT
GCCGTCCAAAGACTGTGCGCACAGCTGGACTACAACCCGCACGCCGTATT
CGTCATTGAGCACAGTGACAACCACAAGCCGATCTTCCCCAGCCCGTGCA
CCGTACAGGACGCCCTTTTACGTTATGTGGATATCACGAGCATTCCTCGT
CGAAGCTTATTAGAGCAGCTCGTCCCGTATATCGTGGACGACCGTGAACG
GGACACCTTGCGCCAACTTAGCTCAAAGGAGGGTCGGAAGGAGTACCACC
GTGTCGTGGAGGAACCGGGAAGGACCTTGGCTGAGCTGATCTTGGAGAGG
TTTTCGAGCTTGAGCATTCCGCTGCAGCACTTGCTTCACATCGTTCCCCA
TCTTCACCCGCGCTATTATACTATCTCTTCGTCCTCATCCATCTCGCCGT
CGCGGGTACACATCACTGTCGCTGTTTTAGAACAAGAACGAAGCGAGGGC
CGAGTGTACCGTGGGATCTGCTCTACTTTCCTCAGCAAATTGGAGCCCCC
GTCCATAACCGGGCGGGCAGGGGCAGCGGGCGAAGACGGGGCCACAACAG
GTGATGGCGGCAGGCCACGGTGTAATGTTTTTGTACGGGCATCAACTTTT
CGCTTGCCATCGAACTCGGCTCTCCCGATCATCATGATTGGGCCAGGGAC
AGGAATCGCTCCCATGCGAGCGTTGCTTCAGGAACGCAGCTGGCAGAAGG
CGCAAGGAGAGAGCGTCGGACGTAACTGGTTGTACTTCGGGTGCAGGTGC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig8818:8461..10110+

>mRNA_H-paniculata_contig8818.16731.1 ID=mRNA_H-paniculata_contig8818.16731.1|Name=mRNA_H-paniculata_contig8818.16731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3300bp|location=Sequence derived from alignment at H-paniculata_contig8818:8461..10110+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTATTCGAGTGGACCGAACGCCTGGTTATATGTTGCAATCGGCACAGG
TATCGCTGTACTCCTACCTGCTGTTGGTCTACTCATACGAAAAAAAAAAG
TTGTGCCAGAACCCATCGACCCAGAAGACGATTTGCTGCGGGGCGACTCC
ATCGTCGTGTACTTCGGCTCTCAGACAGGCACGGCCGAGAGCTTTGCGCA
AATACTCGTTGCTGAGGGTCGTCGGCATGGCTTCCGAATGCGTGTGGTGG
ACTTGGAAGACTTCAGCGCTGAGGAGATGCTCGAAACAGGCAAAGCTATT
TTTCTCGTTGCCACTTATGGTGATGGGGAGCCAACCGACAACGCGGCGGA
ATTCGCCACGTGGCTGGATAACAAGGGCGATGAATTGCCGAGTGATTACC
TCGCTACATTGAATTTCGCCGTGTTTGGCCTAGGCAACAAGCAGTATGAC
CACTACAATTTCATGGGTCGAACAACCGACAGGGGCCTTGAGAAGCTTAG
AGGTCAGCGGATGTACGTATACGGAGAGGGTGACGATGACAACCAGCTCG
AAGAGGACTTCGAGGCGTGGAAGGAGGGGTTGTGGGACTCGTTGGTGGCG
CAATTCGGCGGAAAGGGGGGCGTGGATGGGGTAGATAAGGCTGCAGACAT
TCCTTTTTCGGTGAAGGTACTCGCGGACGACGAAGCGTCGGATTATGCTT
CAACCCCAGAGACTGGTGCAGCTTCTTCCACCAAGTTCTACTGGCAGGGG
CGTGATGCGACCGTTATGGTTAACAGGGAGTTGCGAGCGAAGGGCGAAGC
GGTGGGATCTACGCGCCATATCGAGATTGATCTAGACGGTACCGATGTCA
CATATCACACCGCTGATAACCTGGTCGTTCTGCCACTAAATGATGCAGTT
GCCGTCCAAAGACTGTGCGCACAGCTGGACTACAACCCGCACGCCGTATT
CGTCATTGAGCACAGTGACAACCACAAGCCGATCTTCCCCAGCCCGTGCA
CCGTACAGGACGCCCTTTTACGTTATGTGGATATCACGAGCATTCCTCGT
CGAAGCTTATTAGAGCAGCTCGTCCCGTATATCGTGGACGACCGTGAACG
GGACACCTTGCGCCAACTTAGCTCAAAGGAGGGTCGGAAGGAGTACCACC
GTGTCGTGGAGGAACCGGGAAGGACCTTGGCTGAGCTGATCTTGGAGAGG
TTTTCGAGCTTGAGCATTCCGCTGCAGCACTTGCTTCACATCGTTCCCCA
TCTTCACCCGCGCTATTATACTATCTCTTCGTCCTCATCCATCTCGCCGT
CGCGGGTACACATCACTGTCGCTGTTTTAGAACAAGAACGAAGCGAGGGC
CGAGTGTACCGTGGGATCTGCTCTACTTTCCTCAGCAAATTGGAGCCCCC
GTCCATAACCGGGCGGGCAGGGGCAGCGGGCGAAGACGGGGCCACAACAG
GTGATGGCGGCAGGCCACGGTGTAATGTTTTTGTACGGGCATCAACTTTT
CGCTTGCCATCGAACTCGGCTCTCCCGATCATCATGATTGGGCCAGGGAC
AGGAATCGCTCCCATGCGAGCGTTGCTTCAGGAACGCAGCTGGCAGAAGG
CGCAAGGAGAGAGCGTCGGACGTAACTGGTTGTACTTCGGGTGCAGGTGC
ATGTATTCGAGTGGACCGAACGCCTGGTTATATGTTGCAATCGGCACAGG
TATCGCTGTACTCCTACCTGCTGTTGGTCTACTCATACGAAAAAAAAAAG
TTGTGCCAGAACCCATCGACCCAGAAGACGATTTGCTGCGGGGCGACTCC
ATCGTCGTGTACTTCGGCTCTCAGACAGGCACGGCCGAGAGCTTTGCGCA
AATACTCGTTGCTGAGGGTCGTCGGCATGGCTTCCGAATGCGTGTGGTGG
ACTTGGAAGACTTCAGCGCTGAGGAGATGCTCGAAACAGGCAAAGCTATT
TTTCTCGTTGCCACTTATGGTGATGGGGAGCCAACCGACAACGCGGCGGA
ATTCGCCACGTGGCTGGATAACAAGGGCGATGAATTGCCGAGTGATTACC
TCGCTACATTGAATTTCGCCGTGTTTGGCCTAGGCAACAAGCAGTATGAC
CACTACAATTTCATGGGTCGAACAACCGACAGGGGCCTTGAGAAGCTTAG
AGGTCAGCGGATGTACGTATACGGAGAGGGTGACGATGACAACCAGCTCG
AAGAGGACTTCGAGGCGTGGAAGGAGGGGTTGTGGGACTCGTTGGTGGCG
CAATTCGGCGGAAAGGGGGGCGTGGATGGGGTAGATAAGGCTGCAGACAT
TCCTTTTTCGGTGAAGGTACTCGCGGACGACGAAGCGTCGGATTATGCTT
CAACCCCAGAGACTGGTGCAGCTTCTTCCACCAAGTTCTACTGGCAGGGG
CGTGATGCGACCGTTATGGTTAACAGGGAGTTGCGAGCGAAGGGCGAAGC
GGTGGGATCTACGCGCCATATCGAGATTGATCTAGACGGTACCGATGTCA
CATATCACACCGCTGATAACCTGGTCGTTCTGCCACTAAATGATGCAGTT
GCCGTCCAAAGACTGTGCGCACAGCTGGACTACAACCCGCACGCCGTATT
CGTCATTGAGCACAGTGACAACCACAAGCCGATCTTCCCCAGCCCGTGCA
CCGTACAGGACGCCCTTTTACGTTATGTGGATATCACGAGCATTCCTCGT
CGAAGCTTATTAGAGCAGCTCGTCCCGTATATCGTGGACGACCGTGAACG
GGACACCTTGCGCCAACTTAGCTCAAAGGAGGGTCGGAAGGAGTACCACC
GTGTCGTGGAGGAACCGGGAAGGACCTTGGCTGAGCTGATCTTGGAGAGG
TTTTCGAGCTTGAGCATTCCGCTGCAGCACTTGCTTCACATCGTTCCCCA
TCTTCACCCGCGCTATTATACTATCTCTTCGTCCTCATCCATCTCGCCGT
CGCGGGTACACATCACTGTCGCTGTTTTAGAACAAGAACGAAGCGAGGGC
CGAGTGTACCGTGGGATCTGCTCTACTTTCCTCAGCAAATTGGAGCCCCC
GTCCATAACCGGGCGGGCAGGGGCAGCGGGCGAAGACGGGGCCACAACAG
GTGATGGCGGCAGGCCACGGTGTAATGTTTTTGTACGGGCATCAACTTTT
CGCTTGCCATCGAACTCGGCTCTCCCGATCATCATGATTGGGCCAGGGAC
AGGAATCGCTCCCATGCGAGCGTTGCTTCAGGAACGCAGCTGGCAGAAGG
CGCAAGGAGAGAGCGTCGGACGTAACTGGTTGTACTTCGGGTGCAGGTGC
back to top