mRNA_H-paniculata_contig881.16724.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Match: D8LB62_ECTSI (Metallo-beta-lactamase superfamily protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB62_ECTSI) HSP 1 Score: 515 bits (1327), Expect = 5.370e-173 Identity = 297/585 (50.77%), Postives = 365/585 (62.39%), Query Frame = 3
Query: 141 MAALATAILRGSTSAQHLEEILSRGVDVADLDFRDPLGRSLIHLAAESNDVSALRWLLQENRVNPKAGTVSEGNTALHVAASEGHLEAATYLLEEASVSVAGVNNAGETALDVAVNGGYDDIVRLMIRHLRSPAPP--------------PKPIAEPDAPAPLVCAATTGAADLGSASLEDSNTARVVRDGTTGSPGRRRAPSPFRQHTLDNEQENADKNTQSKNIGRGEGDTAAAA---------------------------PAPENANTMKHAGGRTPPVDGRGVTGGGFFVAGAWSKAGVCSCFNIRHRHLLGKHGVVFDMGVCPFEVTPVQHVFITHGHLDHCGAIVSHARLRSLRGLPPGKYYMHAKLAAGMDTVRRAFEQVEGNSIIMDLVAVGPDDSIDLGQGCFVRPFLVQHRVEALGFALMRRRSAGLKQEYRDFDRKALGALKKRGVEICHSHETVEVVYTGDTVMAPLVALPQVWSARLLIMEVTYLDGDRAAAVKTHHIHVQDLLDNIDKLQGVEQLVVAHVSDRYSPYQSALGLLAAALPPSVINKVSVALGELGAPACLTFLEDYILDKE 1772
MA LATAILRG T+ +HL+++LSRG DVADL F DPLGRSL+HLAA+S DV ALRW++ +P+ T S G+TALH+AA+EGH + +LLEEASV + GVN VRL+ RHL + P+ + P A S + + R P R D+ +G G ++ P+P+ D R +TGGGFFVAGAWSKAGVCSCFN+RHRHLLGKHGVVFDMGVCP EV V HVF++HGHLDHCGAIVSHARLR+L PP KYYM A+LA+GM+ VR+AFE+VEG SI MD+VAVGP+D +DLGQGCFVRPFLV+HRV+ALGFALMR ++ GLK EYR D + +GAL+KRGV++ SHETVEVVYTGDTVM LV+ P VW AR+LIMEVTYLDGD +AA K H+H D+LDN+D+L+ VEQLVVAHVS+R+ +++ L LL+AALPPS +NKVSVALGE GA L+FLEDY+ E
Sbjct: 1 MAGLATAILRGLTTPEHLDDLLSRGADVADLSFVDPLGRSLVHLAADSGDVPALRWVISRG-ADPRKTTPS-GDTALHLAAAEGHRQTVAFLLEEASVGIPGVNATXXXXXXXXXXXXXXXXVRLLARHLPAAXXXXXXXXXXXXXXXXXPQGAGQGVLPG---VAXXXXXXXXXXXXXXXSTLPAITSPSAAAAASIRAQAQPVRAE---------DRRPLDTAVGMATGANIKSSXXXXXXXXXXXXXXXXXXXXXXXXXXKPSPKGXXXXXXXXXXRSAFDERAMTGGGFFVAGAWSKAGVCSCFNVRHRHLLGKHGVVFDMGVCPSEVLHVAHVFVSHGHLDHCGAIVSHARLRALSQGPPAKYYMGAELASGMEKVRKAFEEVEGASIAMDIVAVGPEDRVDLGQGCFVRPFLVKHRVDALGFALMRLKTDGLKHEYRQLDGREIGALRKRGVDVQSSHETVEVVYTGDTVMDGLVSQPLVWEARMLIMEVTYLDGDGSAAAKNFHVH--DVLDNMDRLRRVEQLVVAHVSERHGSHRNVLRLLSAALPPSFVNKVSVALGEFGASQHLSFLEDYVAGGE 569
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Match: A0A7S3MEQ3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEQ3_9STRA) HSP 1 Score: 187 bits (474), Expect = 2.370e-48 Identity = 109/290 (37.59%), Postives = 167/290 (57.59%), Query Frame = 3
Query: 900 VAGAWSKAGVCSCFNIRHRHLLGKHG-VVFDMGVCPFEVTPVQHVFITHGHLDHCGAIVSHARLRSLRGLPPGKYYMHAKLAAGMDTVRRAFEQVEGNSIIMDLVAVGPDDSIDLGQGCFVRPFLVQHRVEALGFALMRRRSAGLKQEYRDFDRKALGALKKRGVEICHSH-ETVEVVYTGDTVMAPLVALPQ---VWSARLLIMEVTYLDGDRAAAVKTHHIHVQDLLDNIDKLQGVEQLVVAHVSDRYSPYQSALGLLAAALPPSVINKVSVALGELGAPACLTFLED 1754
V GAW+KAG+ SC ++ + KH +FD G E ++VFI+HGH+DH G+ +SHAR RSL G +YY+ + +D R+AFE+++ ++I M ++ VGP D+ G V+ F HRV + G+A+ ++ L E R + L+ G I E +++VYTGDT ++ L+ ++ + LI+EVTYLDG++A A K H+H++D+++N VE LV H+S +YS A+ LL LP S+++KVSV+L GA CLT L D
Sbjct: 10 VTGAWTKAGIASCVRVQGSN---KHDDFLFDCGFLNSETILSKYVFISHGHIDHVGSCISHARARSLSG-SVAEYYVPRDIVKHLDDARKAFEKLDNSAIPMKIIGVGPGDTFTFGTNMKVKVFPTCHRVPSQGYAVYVKKKGELLPEMRGLTGAEIKELRMMGQAILSPDTEELQMVYTGDTTLSGLLQYDSSAFIFRSHTLIIEVTYLDGEKAKAEKYGHVHIEDIVENAHLFYEVEHLVFVHLSQKYS-LSRAVKLLRDQLPTSLLHKVSVSLHSFGATECLTRLTD 294
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Match: A0A4D9D594_9STRA (Lactamase_B domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D594_9STRA) HSP 1 Score: 180 bits (457), Expect = 7.230e-46 Identity = 98/291 (33.68%), Postives = 159/291 (54.64%), Query Frame = 3
Query: 891 GFFVAGAWSKAGVCSCFNIRHRHLLGKHGVVFDMGVCPFEVTPVQHVFITHGHLDHCGAIVSHARLRSLRGLPPGKYYMHAKLAAGMDTVRRAFEQVEGNSIIMDLVAVGPDDSIDLGQGCFVRPFLVQHRVEALGFALMRRRSAGLKQEYRDFDRKALGALKKRGVEICHSHETVEVVYTGDTVMAPLVALPQVWSARLLIMEVTYLDGDRAAAVKTHHIHVQDLLDNIDKLQGVEQLVVAHVSDRYSPYQSALGLLAAALPP--SVINKVSVALGELGAPACLTFLEDY 1757
GF ++ AWS AG+ +C +RHR G H + D+G E H+F++HGH+DH GA+++HAR R+L P KYY+ + + A+E ++G + ++V V P D + V F +HRV + G+A++R +S GLK R+ L +K+G + + VEV YTGDT++ ++ P V ARLLI+E TYL+G+ A HH+H+Q+++ + E++V HVS +Y + + L + + P ++ K+ V L G +T+L DY
Sbjct: 74 GFEISSAWSVAGIGTCIQLRHR-AFGLH-IAMDIGTSAGETLGAGHIFVSHGHIDHIGALLNHARARTLSN-KPAKYYVPVPATEPLLRAKAAYEALDGCAFNAEIVGVEPGDICRIHPNVRVEVFPTKHRVPSQGYAIIREKSKGLKAGCRNLSSHELARRRKQGESVVELEDIVEVAYTGDTILKAVLDQPLVRQARLLILECTYLEGEIVWAHSWHHVHMQEIVKHAAAFASNERVVCCHVSRKYKRWDNVLRCFQSGMAPVPALAAKIGVTLAGFGRTEPVTWLVDY 361
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Match: A0A835Z2Q2_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q2_9STRA) HSP 1 Score: 155 bits (393), Expect = 7.110e-39 Identity = 99/285 (34.74%), Postives = 140/285 (49.12%), Query Frame = 3
Query: 1020 VQHVFITHGHLDHCGAIVSHARLRSLRGLPPGKYYMHAKLAAGMDTVRRAFEQVEGNSIIMDLVAVGPDDSIDLGQGCFVRPFLVQHRVEALGFALMRRRSAGLKQEYRDFDRKALGALKKR--------------------------------GVEICHSHETVEVVYTGDTVMAPLVALPQVWSARLLIME-----------------VTYLDGDRAAAVKTHHIHVQDLLDNIDKLQGVEQLVVAHVSDRYSPYQSALGLLAAALPPSVINKVSVALGELGA 1727
V+HVFITHGHLDHCGAI +HARLR R LPP K + AFE++ + + M++V + P + + +G GC+V PF HRV + G+ + RR GLK EY+ AL L+ GVE+ +TVEV +TGDT APL+ ++W A++LI+E +TYLDG AVK H H+ ++ + + GV +L+ HV+ R S + A+ LL ALP + + SV L GA
Sbjct: 3 VEHVFITHGHLDHCGAIFTHARLRG-RDLPPAK-------------AKGAFEELGEDELPMEIVPIQPGEEVSIGNGCYVAPFPTAHRVPSQGYIIRDRRPRGLKPEYQGLAAAALKELRAATARTRPAGGGAEGAARDNGXXXXXXXXXXXXAGVEVGQLTDTVEVAFTGDTSFAPLLEQEEIWRAKILILEDAPRYASAVTSARGRVAMTYLDGTLDGAVKWCHTHLSEVAASAHRFSGVRELIACHVTARKSRFD-AMRLLRKALPRDLAERTSVMLRLFGA 272
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Match: A0A482S4F0_9ARCH (Lactamase_B domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S4F0_9ARCH) HSP 1 Score: 144 bits (363), Expect = 4.230e-35 Identity = 90/239 (37.66%), Postives = 130/239 (54.39%), Query Frame = 3
Query: 1035 ITHGHLDHCGAIVSHARLRSLRGLPPGKYYMHAKLAAGMDTVRRAFEQVEGNSIIMDLVAVGPDDSIDLGQGCFVRPFLVQHRVEALGFALMRRRSAGLKQEYRDFDRKALGALKKRGVEICHSHET-VEVVYTGDTVMAPLVALPQ--VWSARLLIMEVTYLDGDRAAAVKTHHIHVQDLLDNIDKLQGVEQLVVAHVSDRYSPYQSALGLLAAALPPSVINKVSVALGELGAPACLT 1742
I+HGH DH GA V HAR ++L P YY+ + + + R AFE ++G I M++VAV P + + QHRV + G+AL L +EY+ L LKK GV+I E +E+VYTGDT L+ ++ A +LIME+TYLD D A AV+ H+H+QD+++N D +Q+V H+S RY+ SAL +L + LP + + V+L GA LT
Sbjct: 2 ISHGHTDHIGAAVIHARAKALSSTP-ATYYVPSAILEHLQAARAAFEAMDGGPIPMNIVAVDPGAEFMISPNIKAKVIQTQHRVPSQGYALYSISQPRLLEEYQGLPPNELRDLKKLGVKIVGEREEHLEMVYTGDTTFTGLLTPENRFIFDAPILIMELTYLDRDIAKAVQYGHVHIQDIVENADVFNN-DQIVFVHLSQRYN-VSSALSILRSNLPVEIAERAKVSLYSFGAREMLT 237
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Match: A0A210QCS4_MIZYE (Nuclear ribonuclease Z n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QCS4_MIZYE) HSP 1 Score: 134 bits (337), Expect = 5.620e-31 Identity = 82/248 (33.06%), Postives = 127/248 (51.21%), Query Frame = 3
Query: 912 WSKAGVCSCFNIRHRHLLGKH-GVVFDMGVCPFEVTPVQHVFITHGHLDHCGAIVSHARLRSLRGLPPGKYYMHAKLAAGMDTVRRAFEQVEGNSIIMDLVAVGPDDSIDLGQGCFVRPFLVQHRVEALGFALMRRRSAGLKQEYRDFDRKALGALKKRGVEICHSHETVEVVYTGDTVMAPLVALP--QVWSARLLIMEVTYLDGDR----AAAVKTHHIHVQDLLDNIDKLQGVEQLVVAHVSDRY 1634
W+ AG+ SC + K + FDMG + HVFI+HGH+DHC A+ HA RSL PP KYY+ + L A M T+ F+++ DL+ P+++I+L V PF HRV ++GF L + +S +K+++ ++ L L+ G ++ + T E+ YTGDT P + ++LI E TY+ R A + HIH+ +++ N VE L++ H SDRY
Sbjct: 57 WTTAGLESCVVVSLNSGQSKQMHLAFDMGYACQKSVKCDHVFISHGHMDHCSALHQHASKRSLIRSPPAKYYIGSDLRAPMQTIHENFKRLSEFPFKADLIVAEPNEAINLPGPYHVVPFKTVHRVPSIGFLLYKTKSH-VKEKFSTHSKQELKKLELSGEQVYYQTVTPELAYTGDTTFEVFSEPPIADLLKVKILITECTYIKTARNVTEAMTRERGHIHLDEIIRNSHMFSEVEALMLVHFSDRY 303
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Match: A0A1S3J4P0_LINUN (tRNase Z TRZ1 isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J4P0_LINUN) HSP 1 Score: 132 bits (333), Expect = 1.450e-30 Identity = 83/258 (32.17%), Postives = 128/258 (49.61%), Query Frame = 3
Query: 912 WSKAGVCSCFNIRHRHLLGKHGVVFDMGVCPFEVTPVQHVFITHGHLDHCGAIVSHARLRSLRGLPPGKYYMHAKLAAGMDTVRRAFEQVEGNSIIMDLVA------VGPDDSIDLGQGCFVRPFLVQHRVEALGFALMRRRSAGLKQEYRDFDRKALGALKKRGVEICHSHETVEVVYTGDTVMAPL--VALPQVWSARLLIMEVTYLDGD--------RAAAVKTHHIHVQDLLDNIDKLQGVEQLVVAHVSDRYS 1637
WS AG+ + +R L + FDMG QHVFI+HGH+DH G + SH R R + P YYM L + T +++ E S +L VGP +SI L PF H V + G+ + ++ LK+E++ + + + +LKK+GVE+ E+ +TGDT +A P + ++LI+E TY+D D R A + H+H+Q+L+DN D + V + + H SD+YS
Sbjct: 45 WSVAGLETSVVVRKDDLK----LAFDMGYASRPAVSCQHVFISHGHIDHIGGVPSHVRKRLMSHAKPSTYYMPEHL---VQTTKQSLEIAAVQSETAELATHAYLKPVGPGESIQLPAAYVAVPFPTVHAVTSQGYIIYKQHKK-LKEEFQGMESQEIASLKKQGVEVVDEELVPEIAFTGDTTFEIFEKLAHPDLLKVKVLILEATYIDKDIDKQGKTSRTKARERGHVHLQELIDNADLFKDVGSIYLMHFSDKYS 294
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Match: A0A4Q5XIB1_9DELT (Lactamase_B domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q5XIB1_9DELT) HSP 1 Score: 133 bits (334), Expect = 1.680e-30 Identity = 86/257 (33.46%), Postives = 138/257 (53.70%), Query Frame = 3
Query: 915 SKAGVCSCFNIRHRHLLGKHGVVFDMGVCPFEVTPVQHVFITHGHLDHCGAIVSHARLRSLRGLPPGKYYMHAKLAAGMDTVRRAFEQVEGNSIIMDLVAVGPDDSIDLGQGCFVRPFLVQHRVEALGFALMRRRSAGLKQEYRDFDRKALGALKKRGVEICHSHETVEVVYTGDTVMAPLVALPQVWSARLLIMEVTYLDG--DRAAAVKTHHIHVQDLLDNIDKLQGVEQLVVAHVSDRYSPYQSALGLLAAALP 1679
S AG+ +C + LL D+G C + V I+HGHLDH GAI HA RSL G+ G+Y++ +++A+ ++ + A ++G I +V + P LG+ +RPF HRV + G+ + RS L+ E+R + LGAL++RGVE+ +HE + +TGDT + L P++ L++E ++LD A A HIH+ +L+D + L + +V++H S RY+ + L LL LP
Sbjct: 91 SVAGLETCIEVPSLKLL------LDVGSCSRSAVNHRRVLISHGHLDHIGAIAQHAARRSLLGMEEGEYFVPSEIASQVEALFNAAGALDGQVIPRRIVPLSPGRDEPLGKRRTLRPFRTFHRVPSQGYTVWETRSR-LRAEFRGMPGEELGALRRRGVEVAEAHEVPLLSFTGDTRVEVLEQTPELQQTECLVIEASFLDERVPVAQARDMGHIHLDELVDRHELLPKTD-VVLSHFSSRYTTEEVTL-LLKRKLP 338
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Match: UPI00065BD6AE (tRNase Z TRZ1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BD6AE) HSP 1 Score: 130 bits (328), Expect = 6.530e-30 Identity = 89/275 (32.36%), Postives = 138/275 (50.18%), Query Frame = 3
Query: 909 AWSKAGVCSCFNIRHRHLLGKHGVVFDMGVCPFEVTPVQHVFITHGHLDHCGAIVSHARLRSLRGLPPGKYYMHAKLAAGMDTVRRAFEQVEGNSIIMDLVAVGP---DDSIDLGQGCFVRPFLVQHRVEALGFALMRRRSAGLKQEYRDFDRKALGALKKRGVEICHSHETVEVVYTGDTVMAPLV--ALPQVWSARLLIMEVTYLDGDRAA-----AVKTHHIHVQDLLDNIDKLQGVEQLVVAHVSDRYSPYQSALGLLAAALPPSVINKVS 1703
AWS +GV SC I+ + +VFDMGV E +VFITHGH+DH GA+ +H R L G+ P +Y++ L + +V +A ++ ++ V V P D + L FV+ F HR+ + G+ + + LK+EYR + + AL + G EI T E+ YTGDTV + P + +LLI E T+LD + A H H+ ++ N + + VE +V+ H S++Y P + + LP S+ NKV+
Sbjct: 42 AWSVSGVESCIVIKSEDV----HIVFDMGVAVPESVRGMNVFITHGHVDHIGAVANHVSKRGLNGMKPARYFVPPHLVDNLKSVTKAHYEMAETVEALENVKVLPFAEGDCVRLNSRFFVKTFPTVHRICSQGYIVYKEEKR-LKEEYRGMEGFEVAALHREGREIHEVSITPEIAYTGDTVFDIFLNPPNPDLLKVKLLITEATFLDDEIGKNMVQKARDRGHTHLCEIAQNAELFEDVEHIVLVHFSNKYPPKYIS-DCIRDKLPLSLRNKVT 310
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Match: A0A1V6CY64_9BACT (Ribonuclease Z n=1 Tax=Planctomycetes bacterium ADurb.Bin126 TaxID=1852903 RepID=A0A1V6CY64_9BACT) HSP 1 Score: 129 bits (324), Expect = 9.930e-30 Identity = 82/242 (33.88%), Postives = 128/242 (52.89%), Query Frame = 3
Query: 981 VFDMGVCPFEVTPVQHVFITHGHLDHCGAIVSHARLRSLRGLPPGKYYMHAKLAAGMDTVRRAFEQVEGNSIIMDLVAVGPDDSIDLGQGCFVRPFLVQHRVEALGFALMRRRSAGLKQEYRDFDRKALGALKKRGVEICHSHETVEVVYTGDTVMAPLVALPQVWSARLLIMEVTYLDGDRAAAVKT-HHIHVQDLLDNIDKLQGVEQLVVAHVSDRYSPYQSALGLLAAALPPSVINKVS 1703
VFD+G CP E + HV +THGH+DH IV + R +G+ G + A L +D + A+ +VEG+ LV + D ++ +G VR F +H +LGF ++ R+ LK E+ + LKK+GVEI + E V Y GDT+ A LP V +A+ L++E T+ D D + HIHVQDL ++ + + + + HV+ R + Q A +L ALP ++++S
Sbjct: 38 VFDIGKCPREALRINHVLLTHGHMDHAAGIVYYFSQRDFQGIANGVALVPADLVKPLDALMTAWGRVEGHVPPYRLVGMKHGDDYEVRRGLVVRAFATRHIPGSLGFCIIDVRNK-LKAEFDGLTGPQIVELKKKGVEITNRVEYPLVAYLGDTMAANYAELPYVANAKALLIECTFFDPDHVKRARLGKHIHVQDLAGVLEGMNN-QHIFICHVTRRTNMAQ-ARKILRKALPKETLDRIS 276 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig881.16724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig881.16724.1 >prot_H-paniculata_contig881.16724.1 ID=prot_H-paniculata_contig881.16724.1|Name=mRNA_H-paniculata_contig881.16724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=571bp MAALATAILRGSTSAQHLEEILSRGVDVADLDFRDPLGRSLIHLAAESNDback to top mRNA from alignment at H-paniculata_contig881:8021..15922+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig881.16724.1 ID=mRNA_H-paniculata_contig881.16724.1|Name=mRNA_H-paniculata_contig881.16724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7902bp|location=Sequence derived from alignment at H-paniculata_contig881:8021..15922+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig881:8021..15922+ >mRNA_H-paniculata_contig881.16724.1 ID=mRNA_H-paniculata_contig881.16724.1|Name=mRNA_H-paniculata_contig881.16724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3426bp|location=Sequence derived from alignment at H-paniculata_contig881:8021..15922+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |