mRNA_H-paniculata_contig8737.16662.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8737.16662.1 vs. uniprot
Match: D7FPE6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPE6_ECTSI) HSP 1 Score: 383 bits (984), Expect = 1.780e-121 Identity = 262/392 (66.84%), Postives = 295/392 (75.26%), Query Frame = 1
Query: 1 RLLRRHLEEAEAMKTQLHAEMAAVRSQKEAAELERHKLILAHQSETAVSHVKASTLEADKQALQRRCADVEDLASRRRRQLEEARDRLQDALEEASKLKEACSGKDTIALEARAEAKDAAERLAVEWGREKAELKATNEALVKRITMAERRYREVSEQAAERARGAQQLEXXXXXXXXXXXXXXXXXLARMEAEVXXLRLXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTLREKEALRERIAALQSRADXSAEVTEEMTRERDEARLTTVAAAQRTQQERDALAEVEGENEGLRMRLQAMEEEIAVLAGEADQAREAHVRALKDIKSTACAERDSHIAHARHELETLRRRARRTVHKERKRSRAYKAQAIEAHKRGMRARSALQARACAAAM 1176
RLLRR LEEAEA+K QLHAEMAAVRS++EAAELERHKL+LAHQSE+A +HV+ STLEADK+ALQRRCA+ ED RRRRQ ++ARDRLQDALEE SKLKEAC+GKD +ALEARAE + AAERLA+EWGREKAELKA NE L+KRI +AERR RE SEQAA R R AQQ+E L+++EAEV LRL XXXXXXXXXXXXXXXXX LREKEALRER+AALQS AD S E E RERDEA + LAEVEGENEGLR RL+ EEE+A L EADQAREAHV ALKDI+ A AERDSH+A R+ELE+LRRRA R+V KERKRSRAYKAQAIEAH+RG R R LQ+RA A A+
Sbjct: 220 RLLRRKLEEAEAVKAQLHAEMAAVRSEREAAELERHKLVLAHQSESAATHVRVSTLEADKKALQRRCAEAEDTTDRRRRQADDARDRLQDALEEVSKLKEACAGKDRVALEARAEVRHAAERLALEWGREKAELKAANEGLIKRIALAERRSREASEQAANRFRAAQQVEERVRSETGKETSALRESLSQLEAEVERLRLEGERVGSSAQXXXXXXXXXXXXXXXXXXXXLREKEALRERVAALQSAADRSEEAAEGAGRERDEAXXXXXXXXXXXXXXXECLAEVEGENEGLRERLRMAEEELAGLVAEADQAREAHVSALKDIRRAAGAERDSHVARVRYELESLRRRAHRSVRKERKRSRAYKAQAIEAHQRGQRTRQVLQSRASALAL 611 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8737.16662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8737.16662.1 >prot_H-paniculata_contig8737.16662.1 ID=prot_H-paniculata_contig8737.16662.1|Name=mRNA_H-paniculata_contig8737.16662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=561bp MKTQLHAEMAAVRSQKEAAELERHKLILAHQSETAVSHVKASTLEADKQAback to top mRNA from alignment at H-paniculata_contig8737:1112..10040- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8737.16662.1 ID=mRNA_H-paniculata_contig8737.16662.1|Name=mRNA_H-paniculata_contig8737.16662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8929bp|location=Sequence derived from alignment at H-paniculata_contig8737:1112..10040- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8737:1112..10040- >mRNA_H-paniculata_contig8737.16662.1 ID=mRNA_H-paniculata_contig8737.16662.1|Name=mRNA_H-paniculata_contig8737.16662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3366bp|location=Sequence derived from alignment at H-paniculata_contig8737:1112..10040- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |