mRNA_H-paniculata_contig8735.16661.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Match: A0A6H5JFY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY6_9PHAE) HSP 1 Score: 300 bits (769), Expect = 7.690e-95 Identity = 140/183 (76.50%), Postives = 161/183 (87.98%), Query Frame = 1
Query: 247 RSHAFRNLRHGQRINSFPRTFECTRKDALSRNMNRMSQVHGERHFGFIPRGFVLPAEREELRQAMLETAESEAWIVKPASSACGRGIFVTRRFSDMPSCTRSEGNWIAQRYVANPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSDDTSSFSNRFMHLTNYSINKKNGRYVPG 795
RSH FRNL+ GQRINSFPRT+ECTRKDALSRNMNRMS+VHG RHF F PRGFVLPAERE LR+AML T+E EAWIVKPA+SACGRGI++T+ F+DMP T ++GNWIAQ+YV +P+LLDGLKFDLRLYVAVTSFRPLRVYLH+EGLCRLATE Y D SF N+F+HLTNYSIN+++ RY G
Sbjct: 174 RSHVFRNLKRGQRINSFPRTYECTRKDALSRNMNRMSEVHGARHFSFAPRGFVLPAEREALREAMLNTSEGEAWIVKPANSACGRGIYITKNFADMPVGTGADGNWIAQQYVEDPMLLDGLKFDLRLYVAVTSFRPLRVYLHDEGLCRLATETYRPDAPSFGNKFIHLTNYSINRRSNRYEHG 356
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Match: D8LTG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG1_ECTSI) HSP 1 Score: 302 bits (773), Expect = 5.050e-93 Identity = 142/183 (77.60%), Postives = 159/183 (86.89%), Query Frame = 1
Query: 247 RSHAFRNLRHGQRINSFPRTFECTRKDALSRNMNRMSQVHGERHFGFIPRGFVLPAEREELRQAMLETAESEAWIVKPASSACGRGIFVTRRFSDMPSCTRSEGNWIAQRYVANPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSDDTSSFSNRFMHLTNYSINKKNGRYVPG 795
RSH FRNL+ GQRINSFPRT+ECTRKDALSRNMNRMS+VHG RHF F PRGFVLPAERE LR+AML T+E E WIVKPASSACGRGI++T+ F+DMP T +GNWIAQRYV +P+LLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATE Y D SF N+F+HLTNYSIN+++ RY G
Sbjct: 159 RSHVFRNLKRGQRINSFPRTYECTRKDALSRNMNRMSEVHGARHFSFAPRGFVLPAEREALREAMLNTSEGETWIVKPASSACGRGIYITKNFADMPVGTGPDGNWIAQRYVEDPMLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATETYRPDAPSFGNKFIHLTNYSINRRSNRYEHG 341
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Match: A0A7S3XKD1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKD1_HETAK) HSP 1 Score: 222 bits (565), Expect = 1.890e-66 Identity = 106/177 (59.89%), Postives = 132/177 (74.58%), Query Frame = 1
Query: 247 RSHAFRNLRHGQRINSFPRTFECTRKDALSRNMNRMSQVHGERHFGFIPRGFVLPAEREELRQAMLETAESEAWIVKPASSACGRGIFVTRRFSDMPSCTRSEGNWIAQRYVANPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSDDTSSFSNRFMHLTNYSINKKN 777
+++AF+ R QR+N FPRT+E TRKDAL+ N+NRM ++HG+R F F+P FVLP ERE L +AM + WIVKPA SACGRGI++ + S MP EGNWI Y+ PLL+DG KFDLR+YVAVTSF PLR+Y+HEEGLCRLA+ YS+D S +RF+HLTNYSINKKN
Sbjct: 2 KAYAFKAFRPWQRVNQFPRTWELTRKDALAHNLNRMREIHGDRSFSFMPLCFVLPKEREALAEAMRK--RQRTWIVKPAGSACGRGIYLATKLSQMPEM--KEGNWIVSEYIDRPLLIDGFKFDLRIYVAVTSFHPLRIYVHEEGLCRLASRQYSNDPSLVRDRFIHLTNYSINKKN 174
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Match: A0A7S1CKS8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKS8_9STRA) HSP 1 Score: 226 bits (577), Expect = 8.310e-66 Identity = 126/263 (47.91%), Postives = 159/263 (60.46%), Query Frame = 1
Query: 4 SYHVASCMCELCRRARAKRKPGPPTRPTFKIVGPEPTLVSATLEAHGFKRGGGKNGRGARRGKGTGSTPWRILCYSLLSLH-RSHAFRNLRHGQRINSFPRTFECTRKDALSRNMNRMSQVHGERHFGFIPRGFVLPAEREELRQAMLETAESEAWIVKPASSACGRGIFVTRRFSDMPSCTRSEGNWIAQRYVANPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSDDTSSFSNRFMHLTNYSINKKNGRYV 789
S HV++C C CR+ R GP R T+K+ LV A +HGF++ T W L S H +S+ F+ L Q++N FPR++E TRKD L+RNM RM Q+HGERHF F+P+ FVLPA+ E R A WIVKP++SA GRGIF+TR + + R E RY+ NPLLLDG KFDLRLYVAVTSF PLR+Y+HEEGL R AT+PY D + N FMHLTNYSINK + ++V
Sbjct: 12 SRHVSTCTCPACRKRVRSRLTGP-LRLTYKMNHSGVGLVHAIFRSHGFRQ--------------TTKDGWNALW---TSAHLKSYVFQGLNRYQKVNQFPRSYEVTRKDNLARNMRRMEQMHGERHFEFMPKSFVLPADIAEFR-AEWAAQRGSPWIVKPSASARGRGIFLTRDWD--VATERFEDGCTVSRYIDNPLLLDGYKFDLRLYVAVTSFHPLRIYVHEEGLARFATDPYDPDPRHYENHFMHLTNYSINKHSKKFV 253
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Match: A0A2R5GCY3_9STRA (Tubulin polyglutamylase TTLL5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCY3_9STRA) HSP 1 Score: 222 bits (565), Expect = 5.120e-64 Identity = 119/278 (42.81%), Postives = 165/278 (59.35%), Query Frame = 1
Query: 1 TSYHVASCMCELCRRARAKRKPGPPTRPTFKIVGPEPTLVSATLEAHGFKRGGGKNGRGARRGKGTGSTPWRILCYSLLSLHRSHAFRNLRHGQRINSFPRTFECTRKDALSRNMNRMSQVHGERHFGFIPRGFVLPAEREELRQAMLETAES---------------EAWIVKPASSACGRGIFVTRRFSDMPSCTRSEGNWIAQRYVANPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSDDTSSFSNRFMHLTNYSINKKNGRYV 789
T HV+SC C C +A+ + P + +K L+ ATLE+ F + T W +L S R H +++L Q++N FPRT+E TRKD L RNM RM ++HG+RHF F P+ FVLPA+R E ++ ++ + E WIVKPA+SACGRGI++T +++P +GN + RY+ANPLLLD KFDLR+YVAVTSF PLRVY+++EGL RL TE Y +D S NR++HLTNYS+ KK+ ++V
Sbjct: 125 TRSHVSSCTCAQCVKAKRAAR-NAPIQLRYKAG---IRLIEATLESSKFVK--------------TTKDDWNVLWVS--GALRPHIYQSLLRHQKVNQFPRTYEITRKDQLCRNMRRMQELHGKRHFDFFPQSFVLPADRSEFQRMAKDSLQRQQPPATSSRPDEETPELWIVKPAASACGRGIYLTDNLAEIPLSGGEDGNVLVSRYIANPLLLDQRKFDLRIYVAVTSFDPLRVYIYQEGLVRLTTEEYRNDAESLKNRYVHLTNYSVQKKSKKFV 382
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Match: UPI001EF8769F (tubulin monoglutamylase TTLL4-like n=1 Tax=Diprion similis TaxID=362088 RepID=UPI001EF8769F) HSP 1 Score: 187 bits (475), Expect = 6.260e-52 Identity = 95/181 (52.49%), Postives = 123/181 (67.96%), Query Frame = 1
Query: 247 RSHAFRNLRHGQRINSFPRTFECTRKDALSRNMNRMSQVHGERHFGFIPRGFVLPAEREELRQAMLETAESEAWIVKPASSACGRGIFVTRRFSDMPSCTRSEGNWIAQRYVANPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSDDTSSFSNRFMHLTNYSINKKNGRYV 789
+S F++LR Q++N FP TF+ RKD L RN++RM HG++ FGF+PR FVLP E LRQA + A E WIVKP +SA G GI V R+S +P + I Q+Y++ P+L+ G KFDLRLYV VTSF PLR+Y++ +GL R A+E Y DD + SNRFMHLTNYSINK + Y
Sbjct: 130 KSLTFKSLRESQKVNHFPGTFQLGRKDRLWRNLSRMIMKHGKKEFGFVPRTFVLPQELRGLRQAWEKAAGREKWIVKPPASARGTGIRVVHRWSQIPK----KKPVIVQQYLSKPMLIGGAKFDLRLYVLVTSFNPLRMYIYPDGLVRFASEKYVDDLNCLSNRFMHLTNYSINKASATYT 306
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Match: A0A8C1E4Q8_CYPCA (Tubulin tyrosine ligase-like family, member 5 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1E4Q8_CYPCA) HSP 1 Score: 181 bits (458), Expect = 4.200e-51 Identity = 100/234 (42.74%), Postives = 140/234 (59.83%), Query Frame = 1
Query: 88 FKIVGPEPTLVSATLEAHGFKRGGGKNGRGARRGKGTGSTPWRILCYSLLSLHRSHAFRNLRHGQRINSFPRTFECTRKDALSRNMNRMSQVHGERHFGFIPRGFVLPAEREELRQAMLETAESEAWIVKPASSACGRGIFVTRRFSDMPSCTRSEGNWIAQRYVANPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSDDTSSFSNRFMHLTNYSINKKNGRYV 789
FKIV E LV L HGF S + ++ S + + R+L+ Q++N FPR+FE TRKD L +N+ RM Q HG ++F +P+ FVLPAE +E + + + AWI+KP +S+ GRGI++ S +P + N + RY++NPLL+DG KFD+RLYV VTS+ PL +YL+EEGL R AT Y T++ N+FMHLTNYS+NKK+ YV
Sbjct: 60 FKIVRTESRLVRGILVNHGFHE------------VHPNSNDFNLMWTG--SHLKPYLLRSLQDFQKVNHFPRSFELTRKDRLYKNIQRMQQTHGFQNFHIVPQTFVLPAEYQEFSSSF--SKDKGAWIIKPVASSRGRGIYLVSSPSQIPL----DENILVSRYISNPLLIDGFKFDVRLYVLVTSYDPLLIYLYEEGLARFATVKYDHATANIKNQFMHLTNYSVNKKSSDYV 273
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Match: A0A8C2JM79_CYPCA (Tubulin tyrosine ligase-like family, member 5 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2JM79_CYPCA) HSP 1 Score: 182 bits (461), Expect = 4.500e-51 Identity = 101/234 (43.16%), Postives = 140/234 (59.83%), Query Frame = 1
Query: 88 FKIVGPEPTLVSATLEAHGFKRGGGKNGRGARRGKGTGSTPWRILCYSLLSLHRSHAFRNLRHGQRINSFPRTFECTRKDALSRNMNRMSQVHGERHFGFIPRGFVLPAEREELRQAMLETAESEAWIVKPASSACGRGIFVTRRFSDMPSCTRSEGNWIAQRYVANPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSDDTSSFSNRFMHLTNYSINKKNGRYV 789
FKIV E LV L HGF S + ++ S + + R+L+ Q++N FPR+FE TRKD L +N+ RM Q HG ++F +P+ FVLPAE +E + + + AWI+KP +S+ GRGI++ S +P E N + RY++NPLL+DG KFD+RLYV VTS+ PL +YL+EEGL R AT Y T++ N+FMHLTNYS+NKK+ YV
Sbjct: 68 FKIVRTESRLVRGILVNHGFHE------------VHPNSNDFNLMWTG--SHLKPYLLRSLQDFQKVNHFPRSFELTRKDRLYKNIQRMQQTHGFQNFHIVPQTFVLPAEYQEFSSSF--SKDKGAWIIKPVASSRGRGIYLVSSPSQIPL----EENILVSRYISNPLLIDGFKFDVRLYVLVTSYDPLLIYLYEEGLARFATVKYDHATANIKNQFMHLTNYSVNKKSSDYV 281
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Match: A0A1R2CL98_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CL98_9CILI) HSP 1 Score: 184 bits (466), Expect = 4.570e-51 Identity = 103/238 (43.28%), Postives = 150/238 (63.03%), Query Frame = 1
Query: 70 PPTRPT----FKIVGPEPTLVSATLEAHGFKRGGGKNGRGARRGKGTGSTPWRILCYSLLSLHRSHAFRNLRHGQRINSFPRTFECTRKDALSRNMNRMSQVHGERHFGFIPRGFVLPAEREELRQAMLETAESEAWIVKPASSACGRGIFVTRRFSDMPSCTRSEGNWIAQRYVANPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSDDTSSFSNRFMHLTNYSINK 771
PP++P FK +G E L+ LE +GFK G KN W ++ +S ++ RS ++NL Q++N FPR+ E T+KD L +N+ +M ++G+RH+ FIP ++LP + L + M +ES WI+KPA+ + GRGIF+T R SD+P +A RY++NPLL++ LKFDLR+Y+AVTS PLR+Y+ +EG+ R ATEPY D + NRF+HLTNYS+NK
Sbjct: 83 PPSQPNVGYMFKFLGGEVKLIRWLLEDNGFKEG--KNN-------------W-LIGWSNTAM-RSQIYQNLTPFQKVNHFPRSHEITKKDNLFKNITKMQSLYGKRHYNFIPETYILPNDSMRLSEEMDRDSES-LWIIKPAAGSQGRGIFLTNRISDVPQAQAM----VASRYISNPLLINMLKFDLRIYIAVTSMDPLRIYIFKEGIARFATEPY--DLKNPRNRFVHLTNYSLNK 296
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Match: UPI00062564CD (tubulin polyglutamylase TTLL4-like n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI00062564CD) HSP 1 Score: 181 bits (458), Expect = 2.130e-49 Identity = 92/181 (50.83%), Postives = 121/181 (66.85%), Query Frame = 1
Query: 247 RSHAFRNLRHGQRINSFPRTFECTRKDALSRNMNRMSQVHGERHFGFIPRGFVLPAEREELRQAMLETAESEAWIVKPASSACGRGIFVTRRFSDMPSCTRSEGNWIAQRYVANPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSDDTSSFSNRFMHLTNYSINKKNGRYV 789
+S AF++LR Q+IN FP TF+ RKD L RN++RM HG++ FGF+PR +VLP + RQ +T E WIVKP +SA G GI V R+S +P + I Q+Y++ P+L+ G KFDLRLYV VTSF PLRVY++ +GL R A+ Y DD + S+RFMHLTNYSINK + Y
Sbjct: 140 KSMAFKSLRESQKINHFPGTFQIGRKDRLWRNLSRMMIKHGKKEFGFVPRTYVLPQDLRGFRQVWEKTGGKEKWIVKPPASARGTGIRVVHRWSQIPK----KKPVIVQQYLSKPMLIGGAKFDLRLYVLVTSFNPLRVYIYPDGLVRFASVKYRDDINYLSDRFMHLTNYSINKTSSTYT 316 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8735.16661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8735.16661.1 >prot_H-paniculata_contig8735.16661.1 ID=prot_H-paniculata_contig8735.16661.1|Name=mRNA_H-paniculata_contig8735.16661.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp MCELCRRARAKRKPGPPTRPTFKIVGPEPTLVSATLEAHGFKRGGGKNGRback to top mRNA from alignment at H-paniculata_contig8735:5940..9953+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8735.16661.1 ID=mRNA_H-paniculata_contig8735.16661.1|Name=mRNA_H-paniculata_contig8735.16661.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4014bp|location=Sequence derived from alignment at H-paniculata_contig8735:5940..9953+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8735:5940..9953+ >mRNA_H-paniculata_contig8735.16661.1 ID=mRNA_H-paniculata_contig8735.16661.1|Name=mRNA_H-paniculata_contig8735.16661.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig8735:5940..9953+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |