mRNA_H-paniculata_contig8704.16641.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 311 bits (798), Expect = 6.310e-92 Identity = 194/474 (40.93%), Postives = 274/474 (57.81%), Query Frame = 1
Query: 1 KDPLQEALERHSGALKFLNTHLVLDYVLLKFSTTLPNWLARNPFRYYINQGFYTYE-------------TRNNQQTSETWPLSSTQLLRSSVVHGANLGLAVIDVGHILIENESRFLQGWDPDNVMRPQEIGTDFPHQTLLPGLQFVLAGIVGKPDTFFTVPVVRFAFDIFSYVTLLGLVIVCNPIQDNDNVPFWEIIFYVFGAGMLWREFLEFRAATLWGTRTPTAPVGTKDNGCTGIFCPQARVQPQ----------NRLATGFNRYLFHDTWNILDTTTVLLILVALIFRLLEDFDDVDNSTDGFKQEAFFAARFCLSTIAPLLFSRLLFLSQINSTLGPLTQIIWTMLSHLARFSIFLLVVMVGFAITFNSLFAIC-------------EGAVVNDGFETFRSSLGVMFQSMLGGPKWEMF--ANSQSICPGPEWALSFGFLLLAMYMLIVVILLLNLLIAVLSTVQAKV 1308
KDPLQ AL+R S AL+FL + LVLDYV +KF+ TLP+W +RNPF+ IN+G Y Y+ ++N+Q T T P ++ S G+ L + + L+ RFLQGWD Q + + PH T+LPGLQF LAGI+GKP+TFF VPV+RF ++IFSY+ +L L +++ D +P E+IFY+F AG+LWRE LEF + T++ G RV+P NR+ + F RY+F+DTWN +DT+T+ I VA IFR++ FD + F A+F + APLLFSRLL LSQI++TLGP+TQ+IW M+SH+ RFS F+ +VM+ FA+ F+++F C + + D F TF SL +F S LGGP++++F A S C P A S G ++ +Y + + ++LLNLLIAVLST +V
Sbjct: 725 KDPLQSALDRGSDALEFLFSPLVLDYVHVKFAGTLPHWSSRNPFQPTINEGLYKYDNFEVYDLAKLLRGSKNDQATGRTAPSGASSASTGSTNRGSFLWRSPGSIMSFLL----RFLQGWDHPR-SNDQSVWS-IPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYEIFSYLVMLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRTSGGPRTEEGG---------RVEPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDTSTICCIFVAFIFRMIARFDSEFD---------LFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCGEHSEPQCTLDDDDAFPLRDAFGTFGDSLLTVFSSALGGPEFDLFDDAGSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEV 1174
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI) HSP 1 Score: 314 bits (805), Expect = 6.930e-92 Identity = 199/472 (42.16%), Postives = 275/472 (58.26%), Query Frame = 1
Query: 4 DPLQEALERHSGALKFLNTHLVLDYVLLKFSTTLPNWLARNPFRYYINQGFYTYETRNNQQTSETWPLSSTQLLRSSVVHGANLGLAVIDVGHILIENES-RFLQGWD--PDNVMRPQE--IGTDFPHQTLLPGLQFVLAGIVGKPDTFFTVPVVRFAFDIFSYVTLLGLVIVCNPIQDNDNVPFWEIIFYVFGAGMLWREFLEFRAATLWGTRTPTAPVGT-----------KDNGCTGIFCPQARVQP------QNRLATGFNRYLFHDTWNILDTTTVLLILVALIFRLLEDFDD--------VDNSTDGFKQEAFFAARFCLSTIAPLLFSRLLFLSQINSTLGPLTQIIWTMLSHLARFSIFLLVVMVGFAITFNSLFA---ICEGAVVNDGFETFRSSLGVMFQSMLGGPKWEMFANSQSI-CPGPEWALSFGFLLLAMYMLIVVILLLNLLIAVLSTVQAKVSER 1317
DPLQ+AL + S A F+N LVLDY+ LK+ T PN RNP Y IN+GF TY + N + T G ++G ++ G E R LQGWD P V+R +E + FPH T+LPG QF+LAG++GKP FF VP VRF F+ FSY+ +LGL IQ +D +P EI+FY+F AG+L+RE LEFR A + ++P + +D+G + AR + Q R+ +G RY D WNILDT ++ +++A IFR++ D + N+ G +AFF ARF L+ IAPLLF+R+L L+Q+++T GP+TQIIW ML HLARFS+F+LVVMV FA+ F+SL++ EG + + + T R SL MF+SMLG ++ F +++ C GP W G LL +Y+++ IL+LNLLIAVLSTV VSE
Sbjct: 1150 DPLQQALTKGSDAHDFINAPLVLDYLELKWKCTTPNLDRRNPLDYTINEGFSTYRSGNGKYTLPE--------------KGVDIGDTFLERGGTTAEESLLRLLQGWDRGPTRVLRFKEKHLLHGFPHTTVLPGTQFLLAGLLGKPTDFFLVPFVRFMFETFSYLVMLGLYWSSVAIQYSDIIPADEILFYLFAAGLLFREILEFRDALPPSVSSSSSPTSSPSDATMSSDDGEDHGSSEPDSLAARAREERSGLSQRRVTSGLRRYFSKDNWNILDTASIFCVMLAFIFRIIAYIADFAQAATTILGNTLIG---QAFFIARFSLAAIAPLLFARVLSLAQVDNTFGPMTQIIWNMLFHLARFSVFMLVVMVSFALAFHSLYSDPNCSEGDELFESYRTLRESLLDMFRSMLGDANFDRFEADRNLTCTGPSWEFDAGITLLTIYIVLQAILMLNLLIAVLSTVHDTVSEN 1604
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Match: A0A6H5JTT3_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE) HSP 1 Score: 293 bits (751), Expect = 1.240e-86 Identity = 188/474 (39.66%), Postives = 266/474 (56.12%), Query Frame = 1
Query: 1 KDPLQEALERHSGALKFLNTHLVLDYVLLKFSTTLPNWLARNPFRYYINQGFYTYE-------------TRNNQQTSETWPLSSTQLLRSSVVHGANLGLAVIDVGHILIENESRFLQGWDPDNVMRPQEIGTDFPHQTLLPGLQFVLAGIVGKPDTFFTVPVVRFAFDIFSYVTLLGLVIVCNPIQDNDNVPFWEIIFYVFGAGMLWREFLEFRAATLWGTRTPTAPVGTKDNGCTGIFCPQARVQPQ----------NRLATGFNRYLFHDTWNILDTTTVLLILVALIFRLLEDFDDVDNSTDGFKQEAFFAARFCLSTIAPLLFSRLLFLSQINSTLGPLTQIIWTMLSHLARFSIFLLVVMVGFAITFNSLFAIC-------------EGAVVNDGFETFRSSLGVMFQSMLGGPKWEMF--ANSQSICPGPEWALSFGFLLLAMYMLIVVILLLNLLIAVLSTVQAKV 1308
KDPLQ AL+R S AL+FL + LVLDYV +KF+ TLP W +RNPF+ IN+GF+ Y+ + N+Q P S T + G +LG + + + R LQGWD + + + PH T+LPGLQF LAGI+GKP+TFF VPV+RF ++ FSY+ +L L +++ D +P E+IFY+F AG+LWRE LEF + +G + G RV+P NR+ + F RY+F+DTWN +D +T+ ILVA IFR++ FD + F A+F + APLLFSRLL LSQI++TLGP+TQ+IW M+SH+ RFS F+ +VM+ FA+ F+++F C + + D F TF S +F S LGGP+ ++F S C P A S G ++ +Y + + ++LLNLLIAVLST +V
Sbjct: 90 KDPLQSALDRGSDALEFLFSPLVLDYVHVKFAGTLPPWWSRNPFQPTINEGFFEYDDFEVYDLAKLLRGSGNDQAKGGNEP-SGTPTASTGSTAGESLGSFLWQLPGSFMSFLLRVLQGWD--HPRSNESVWYYVPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYESFSYLVMLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRISRGLGPEVGG---------RVKPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDMSTICCILVAFIFRMIARFDSEFD---------LFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCGEYSEPQCTLDDDDPFPLRDAFGTFGDSFVTVFSSALGGPEIDLFDDVGSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEV 542
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI) HSP 1 Score: 277 bits (709), Expect = 2.250e-79 Identity = 183/461 (39.70%), Postives = 258/461 (55.97%), Query Frame = 1
Query: 4 DPLQEALERHSGALKFLNTHLVLDYVLLKFSTTLPNWLARNPFRYYINQGFYTYETRNNQQTSETWPLSSTQLLRSSVVHGANLGLAVIDVGHILIENESRFLQGWDPDNVMRPQEIG----------TDFPHQTLLPGLQFVLAGIVGKPDTFFTVPVVRFAFDIFSYVTLLGLVIVCNPIQDNDNVPFWEIIFYVFGAGMLWREFLEF----RAATLWGTRTPTAPVGTKDNGCTGIFCPQARVQPQ---------NRLATGFNRYLFHDTWNILDTTTVLLILVALIFRLLEDFDDVDNSTDGFKQEAFFAARFCLSTIAPLLFSRLLFLSQINSTLGPLTQIIWTMLSHLARFSIFLLVVMVGFAITFNSLFAICE-GAVVNDGFETFRSSLGVMFQSMLGGPKWEMFANSQSICP---GPEWALSFGFLLLAMYMLIVVILLLNLLIAVLSTVQAK 1305
DPLQ AL+R S AL F+++ LVLDY+ +KFS TLPNW + + IN GFYTY + SE LS + G + L+ RFLQGW+P + M P+E PH T+LP LQF LAG++GKP F+ VP VRFA + Y+ +LGL C +QD+ +P E+ FYVF AG LWRE LEF A + G + N T + ++ R+A+ RYLF+DTWN+LDT T+ + +A +FRLL + TD + FF A+F L+ APLLF+RLL LSQI++TLGP+ QIIW MLS RF +F++VVM GFA+ FN++F C+ G+ +++ + +F ++L +F++ LG K+E F + CP P A G LL Y++++ +++LNLLIAVLST +
Sbjct: 840 DPLQRALDRGSKALDFVDSPLVLDYIHVKFSCTLPNWASSSSIPKTINAGFYTYNAFDEYNFSEV--LSVRPEPPEANPGGGSQPCNSKKWDDRLL----RFLQGWNPTD-MNPEEQPRGKSTRRSDRNKLPHTTILPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCSCVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRHRKNKHIKEGNQANMATAVQGASSKRSDMVDYGQGRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFVFRLL-GIREFGGPTDP--GDYFFVAQFFLAVSAPLLFARLLRLSQIDNTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSCDAGSGLDESYGSFGTALLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLIVLAVVMLNLLIAVLSTAHGE 1290
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 275 bits (702), Expect = 3.680e-78 Identity = 183/464 (39.44%), Postives = 254/464 (54.74%), Query Frame = 1
Query: 4 DPLQEALERHSGALKFLNTHLVLDYVLLKFSTTLPNWLARNPFRYYINQGFYTYETRNNQQTSETWPLSSTQLLRSSVVHGANLGLAVIDVGHILIENESRFLQGWDPDNVMRPQEIG----------TDFPHQTLLPGLQFVLAGIVGKPDTFFTVPVVRFAFDIFSYVTLLGLVIVCNPIQDNDNVPFWEIIFYVFGAGMLWREFLEF---------------RAATLWGTRTPTAPVGTKDNGCTGIFCPQARVQPQNRLATGFNRYLFHDTWNILDTTTVLLILVALIFRLLEDFDDVDNSTDGFKQEAFFAARFCLSTIAPLLFSRLLFLSQINSTLGPLTQIIWTMLSHLARFSIFLLVVMVGFAITFNSLFAICE-GAVVNDGFETFRSSLGVMFQSMLGGPKWEMFANSQSICP---GPEWALSFGFLLLAMYMLIVVILLLNLLIAVLSTVQAKV 1308
DPLQ AL+R S AL F+++ LVLDY+ +KFS TLPNW + + IN GFYTY + E W + S + G L + + RFLQGW+P + M P+E PH T+LP LQF LAG++GKP F+ VP VRFA + Y+ +LGL C +QD+ +P E+ FYVF AG LWRE LEF TA + Q R R+A+ RYLF+DTWN+LDT T+ + +A IFRLL + + G + FF A+F L+ APLLF+RLL LSQI+STLGP+ QIIW MLS RF +F++VVM GFA+ FN++F C+ G+ +++ + +F ++ +F++ LG K+E F + CP P A G LL Y++++ +++LNLLIAVLST +V
Sbjct: 840 DPLQRALDRGSKALFFVDSPLVLDYIYVKFSCTLPNWASSSSIPKTINAGFYTYTAFDEY---EFWEVLSVRPGPPEANQGGALQPQPWN-SKKWDDRLLRFLQGWNPTD-MSPEEQPRGRSTRRSDRNKLPHTTVLPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCACVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRXXXXXXXXXXXXXXXXTAAQWASSKRSDTVDYEQGRGL--KRVASAITRYLFYDTWNLLDTLTLSTVFLAFIFRLLGIREFGGPADPG---DYFFVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSCDAGSDLDESYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEV 1293
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 250 bits (639), Expect = 9.110e-70 Identity = 151/339 (44.54%), Postives = 204/339 (60.18%), Query Frame = 1
Query: 367 PHQTLLPGLQFVLAGIVGKPDTFFTVPVVRFAFDIFSYVTLLGLVIVCNPIQDNDNVPFWEIIFYVFGAGMLWREFLEFRAATLWGTRTPTAPVGTKDNGCTGIFCPQARVQPQ----------NRLATGFNRYLFHDTWNILDTTTVLLILVALIFRLLEDFDDVDNSTDGFKQEAFFAARFCLSTIAPLLFSRLLFLSQINSTLGPLTQIIWTMLSHLARFSIFLLVVMVGFAITFNSLFAIC-------------EGAVVNDGFETFRSSLGVMFQSMLGGPKWEMF--ANSQSICPGPEWALSFGFLLLAMYMLIVVILLLNLLIAVLSTVQAKV 1308
PH T+LPGLQF LAGI GKP+TF+ VPV+RFAF+IFSY+ +L L ++++D++P+ E+ FYVF AG+LWRE LEFR P +K++G T Q P+ NR+ + F RY+F+DTWN LDT+T+ ILVA IFR++ DD + F A+F + APLLFSRLL LSQI++TLGP+TQ+IW M+SH RFS F+ +VM+ FA+ F+++F C + + D F TF S +F LGGP +E F A S C PE A + G LL +YM+ + ++LLNLLIAVLST KV
Sbjct: 980 PHSTMLPGLQFSLAGIQGKPETFYKVPVIRFAFEIFSYLVMLVLFCFSVLLKEHDSIPWGEVTFYVFAAGLLWREILEFRDGMPARRHKPPKRQVSKNDGSTRTGSEQPLSFPRISRLGTGNRFNRMVSAFTRYVFYDTWNFLDTSTIGCILVAFIFRMIA-LDD---------KFFLFHAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEYSEPQCTLDDDDAFPLRDAFGTFGDSFVTVFTYALGGPDFEAFQLAGSDCRCDLPEGARNAGIFLLVVYMITMTVVLLNLLIAVLSTTHGKV 1308
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI) HSP 1 Score: 187 bits (476), Expect = 3.570e-48 Identity = 164/568 (28.87%), Postives = 229/568 (40.32%), Query Frame = 1
Query: 4 DPLQEALERHSGALKFLNTHLVLDYVLLKFSTTLPNWLARNPFRYYINQGFYTYETRNNQQTSETWPLSSTQL-LRSSVVHGANLGLA--VIDVGHILIENESRFLQGWDP-DNVMR---------------------------------------------PQEIGTDF------------------------------------------------------------------PHQTLLPGLQFVLAGIVGKPDTFFTVPVVRFAFDIFSYVTLLGLVIVCNPIQDNDNVPFWEIIFYVFGAGMLWREFLEFRAATLWGTRTPTAPVGTKDNGCTGIFCPQARVQPQNRLATGFNRYLFHDTWNILDTTTVLLILVALIFRLLEDFDDVDNSTDGFKQEAFFAARFCLSTIAPLLFSRLLFLSQINSTLGPLTQIIWTMLSHLARFSIFLLVVMVGFAITFNSLFAIC---EGAVVN----------DGFETFRSSLGVMFQSMLGGPKWEMF--ANSQSICPGPEWALSFGFLLLAMYMLIVVILLLNLLIAVLSTVQAKVSER 1317
DPL+ AL+R S AL FLNT LV DYV +KF+ TLP+W +RNPF+ +N+GF+ Y+ + SE + L + G L + +L RFLQGWD D++++ P G F PH T+LPGLQF LAG++GKP+TF+ VP +RF F+IF+Y+ Y+F+DTWN LDT+T+ +LV +FR++ DD F A+F + APLLFSRLL LSQI++TLGP+TQ+IW M+S RFS F+ VVM+ FA+ F+++F C E N D F TF S +F + LGGP +E++ A S+ C P+ A G L+ +YM+I+ ++LLNLLIAVLST +KV +
Sbjct: 908 DPLRRALDRGSEALDFLNTPLVKDYVHIKFACTLPSWTSRNPFQPTVNEGFFKYDDFDTYPLSEVFSAPDENLGSKDEESRGLKAALKEQFLTKSFLL-----RFLQGWDHRDSLLKWNIPIGDIRFASKKFKSDTRASNNXXXXXXXXXXXXXXXXXXXXXPGCCGGRFKSIIPSWLLCCNGNVSGNAXXXXXXNARGDAHDSSAHXXXXXXXXXXXSSCRQPLWFNDKPKRWTIPHSTILPGLQFSLAGVLGKPETFYQVPAIRFVFEIFTYL------------------------------------------------------------------------------------YVFYDTWNFLDTSTIGCLLVTFVFRMIALDDDF----------FLFHAQFFYAASAPLLFSRLLVLSQIDATLGPMTQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEFEDPTCNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAQEAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDN 1376
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Match: A0A6H5K4M1_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M1_9PHAE) HSP 1 Score: 183 bits (464), Expect = 6.800e-47 Identity = 153/478 (32.01%), Postives = 208/478 (43.51%), Query Frame = 1
Query: 4 DPLQEALERHSGALKFLNTHLVLDYVLLKFSTTLPNWLARNPFRYYINQGFYTYETRNNQQTSE--TWPLSSTQLLRSSVVHGANLGLAVIDVGHIL---------------IENESRFLQGWDPDNVMRPQEIGTDFPHQTLLPGLQFVLAGIVGKPDTFFTVPVVRFAFDIFSYVTLLGLVIVCNPIQDNDNVPFWEIIFYVFGAGMLWREFLEFRAATLWGTRTPTAPVGTKDNGCTGIFCPQARVQPQ----------NRLATGFNRYLFHDTWNILDTTTVLLILVALIFRLLEDFDDVDNSTDGFKQEAFFAARFCLSTIAPLLFSRLLFLSQINSTLGPLTQIIWTMLSHLARFSIFLLVVMVGFAITFNSLFAIC-------------EGAVVNDGFETFRSSLGVMFQSMLGGPKWEMFANSQSICPGPEWALSFGFLLLAMYMLIVVILLLNLLIAVLSTVQAKVSER 1317
DPL+ L+R S L +N+ LV DYV +KF+ TLP+W +RNPF+ +N+G Y Y+ SE + P+ + H I + +L ++ S P +P PH T+ PGLQF LAGI GKP TF+ G+LWRE LEFR P K+ T Q+ P+ NR+ + F +F+DTW LDT T+ ILVA IFR V D F F ARF + AP LFSRLL LSQI++TLGP+TQ+IW M+SH RFS F+ +VM+ FA+ F+++F C + + D F TF S +F + C PE A + G LL +YM+ + ++LL LLIAVLST KV +
Sbjct: 225 DPLRRVLDRGSKGLDMVNSPLVRDYVHVKFTGTLPHWTSRNPFQPIVNEGLYKYDDFETYGLSEILSTPVKPPTANQEGE-HSPAQKQGFISMTFLLTLPSQAPTPPMPVPPVQPVSATTNAQAPACRQKPTN-QRRIPHSTMPPGLQFSLAGIQGKPHTFYK--------------------------------------------GLLWREILEFRNGVPARRHKPPKRQVPKNEDNTRAGSEQSLSSPRISRPGTRNRFNRIVSTFTWNVFYDTWKFLDTPTIGCILVAFIFR-------VTTLDDKF---FLFHARFFYALSAPRLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEHIEPQCTFDDDDAFPIRDAFGTFGDSFVTVF--------------TDCRCNLPEGARNAGIFLLVVYMVTMTVVLLKLLIAVLSTTHGKVYDN 632
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.520e-24 Identity = 90/332 (27.11%), Postives = 160/332 (48.19%), Query Frame = 1
Query: 361 DFPHQTLLPGLQFVLAGIVGKPDTFFTVPVVRFAFDIFSYVTLLGL-VIVCNPIQDNDNVPFWEIIFYVFGAGMLWREFLEFRAATLWGTRTPTAPVGTKDNGCTGIFCPQARVQPQNRLATGFNRYLFHDTWNILDTTTVLLILVALIFRLL--------EDFDDVDNSTDGFKQEA--FFAARFCLSTIAPLLFSRLLFLSQINSTLGPLTQIIWTMLSHLARFSIFLLVVMVGFAITFNSLFAICEGAVVNDG----FETFRSSLGVMFQSMLGGPKWEMFANSQSICPGPEWALSFGFLLLAMYMLIVVILLLNLLIAVLSTVQAKVS 1311
D P T LPGLQF+LAG+ GK FF VP +R A D+ Y ++ + V+ ++D + W++++ V+ G +W++ E + A G R + WN+++ T + + A FR+ E F ++ G E + A++ + AP + ++LFL+Q++S+LGPL + ++ L RF +LV+ +GFA+ F ++F ++ + G ++T+ SS+ +F SMLG +E+F + P E G +L+ ++ ++ I LLNLLIA+L+T A++
Sbjct: 623 DSPSWTYLPGLQFILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVHEVQEA-------------------------------------GSLRVHLFNPWNVVEATKLASLSTAFFFRMHAWVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFGSMSASLPDGGDIAEYDTYYSSILTLFSSMLGNFSFEVFKGA----PMAEA----GEVLMVFFLCVMNITLLNLLIAILATAHARLE 909
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Match: A0A6H5JJ53_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJ53_9PHAE) HSP 1 Score: 104 bits (260), Expect = 3.310e-20 Identity = 78/259 (30.12%), Postives = 125/259 (48.26%), Query Frame = 1
Query: 316 GWDPDNV-----MR---PQEI--GTDFPHQTLLPGLQFVLAGIVGKPDTFFTVPVVRFAFDIFSYVTLLGLVIVCNPIQDNDNVPFWEIIFYVFGAGMLWREFLEFRAATLWGTRTPTAPVGTKDNGCTGIFCPQARVQPQNRLATGFNRYLFHDTWNILDTTTVLLILVALIFRLLEDFDDVDNSTDGFKQEAFFAARFCLSTIAPLLFSRLLFLSQINSTLGPLTQIIWTMLSHLARFSIFLLVVMVGFAITFNSLF 1062
G PDNV MR P E+ G+ +L+PGLQF G+ +PD F+ VP VR A D+ +Y+++L L ++ +P E+ FYV+ G + E E R +++ Q+ L WN+++ + L+ A FR+ V +D ++EAFF A+ + APL FSR+LFL+QI+ LG + QI++ ML + RF + + V+++GFA+ +LF
Sbjct: 817 GAAPDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVR--------------------------KLRGQSEL------------WNVVEAVLLGLVCAAFTFRM------VAFGSDVIEEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALF 1031 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8704.16641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8704.16641.1 >prot_H-paniculata_contig8704.16641.1 ID=prot_H-paniculata_contig8704.16641.1|Name=mRNA_H-paniculata_contig8704.16641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=441bp KDPLQEALERHSGALKFLNTHLVLDYVLLKFSTTLPNWLARNPFRYYINQback to top mRNA from alignment at H-paniculata_contig8704:752..4364- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8704.16641.1 ID=mRNA_H-paniculata_contig8704.16641.1|Name=mRNA_H-paniculata_contig8704.16641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3613bp|location=Sequence derived from alignment at H-paniculata_contig8704:752..4364- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8704:752..4364- >mRNA_H-paniculata_contig8704.16641.1 ID=mRNA_H-paniculata_contig8704.16641.1|Name=mRNA_H-paniculata_contig8704.16641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2646bp|location=Sequence derived from alignment at H-paniculata_contig8704:752..4364- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |