mRNA_H-paniculata_contig8692.16629.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8692.16629.1 vs. uniprot
Match: D8LQ91_ECTSI (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ91_ECTSI) HSP 1 Score: 119 bits (298), Expect = 3.570e-28 Identity = 70/165 (42.42%), Postives = 107/165 (64.85%), Query Frame = 1
Query: 1 DTKLSADEKTRFPVNLLVLKAMHDRERLATLAASVVVVGGDTSDDDTLDASDREAMAKAAHFSSFAAAAY-GVMGNFAKLKELVAKEESMPPAELLYDMAL-LKKWYVSRHTSIATEDVKGIVTTGSLKERAFLVAVDHSTRSVVLSIRGTYNVYDAMVDLVCNS 489
D ++SA+E R P+N L++KAMHDR+ LA + + + D L DR + K+AH++ FAAA+Y GV+ +KE++A+ +++PP +L L+KW +S+ T + DVK + T+ SL+ R VAVDH++RSVV+SIRGTY+ D MVDL+CN+
Sbjct: 73 DIQISAEEGKRLPLNFLMVKAMHDRQLLARRSRTAKTSARNRPRVD-LSPRDRRTLRKSAHYARFAAASYDGVVDT---VKEILAEGDTLPPPDLFAKSNDDLRKWCISKRTGVDPSDVKELATSDSLETRTHFVAVDHASRSVVISIRGTYSFTDTMVDLLCNT 233
BLAST of mRNA_H-paniculata_contig8692.16629.1 vs. uniprot
Match: A0A7S3BEX3_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BEX3_9VIRI) HSP 1 Score: 68.9 bits (167), Expect = 1.200e-10 Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 148 ASDREAMAKAAHFSSFAAAAYGVMGNFAKLKELVAKEESMPPAELLY-DMALLKKWYVSRHTSIATEDVK-GIVTTGSLKERAFLVAVDHSTRSVVLSIRGTYNVYDAMVDLVCNS 489
A+ RE +A+A H FA AAYG + + L + S+PPA ++ + ++W V+ H I DVK + GSL ++ VAVDHS+RSVVL++RGT + D +VDLV +S
Sbjct: 68 AAPRELVARARHLMRFADAAYGSV----LMSALGTYQGSLPPAGVVARGVEATERWCVASHLGIDEADVKESHLVGGSLDLPSYYVAVDHSSRSVVLAVRGTSTLEDVLVDLVADS 179
BLAST of mRNA_H-paniculata_contig8692.16629.1 vs. uniprot
Match: A0A7S1HE54_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HE54_HEMAN) HSP 1 Score: 67.0 bits (162), Expect = 4.150e-10 Identity = 42/105 (40.00%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 175 AAHFSSFAAAAYGVMGNFAKLKELVAKEESMPPAELLYDMALLKKWYVSRHTSIATEDVKGIVTTGSLKERAFLVAVDHSTRSVVLSIRGTYNVYDAMVDLVCNS 489
A ++ A AAYGV GN KE V E S+PP + ++WY+S T I ED+ I S+ RA +AVD +VLSIRGT + DA+ DL+ +S
Sbjct: 154 ALRYAKLARAAYGVAGNDKICKERVFAEMSLPP----WSKDEQEQWYISYDTGIPKEDILEIQMADSVGSRAHFLAVDRKHGEIVLSIRGTATLNDALADLLFDS 254
BLAST of mRNA_H-paniculata_contig8692.16629.1 vs. uniprot
Match: A0A835YZP1_9STRA (Intra-flagellar transport protein 57-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZP1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 7.890e-9 Identity = 30/64 (46.88%), Postives = 48/64 (75.00%), Query Frame = 1
Query: 301 LKKWYVSRHTSIATEDVKGIVTTGSLKERAFLVAVDHSTRSVVLSIRGTYNVYDAMVDLVCNST 492
L++WY+S IA EDV I T S++ R+ VAVDH+++SVV++IRGT ++ D+M+DL+ ++T
Sbjct: 451 LERWYISDQVGIAVEDVILIEPTDSVEMRSHFVAVDHNSKSVVVTIRGTMSIVDSMLDLLLDTT 514
BLAST of mRNA_H-paniculata_contig8692.16629.1 vs. uniprot
Match: A0A7S1Z4C1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z4C1_TRICV) HSP 1 Score: 54.3 bits (129), Expect = 3.400e-6 Identity = 46/126 (36.51%), Postives = 65/126 (51.59%), Query Frame = 1
Query: 118 GDTSDDDTLDASDREAMAKAAHFSSFAAAAYGVMGNFAKLKELVAKEESMPPAELLYDMALLKKWYVSRHTSIAT---EDVKGIVTTGSLK-ERAFLVAVDHSTRSVVLSIRGTYNVYDAMVDLVC 483
GD S+D +D +A+ A H+ +A+AAYG + L+ + +PP L D+AL +W V+ H EDVK + + S VAVD + VVL IRGT N+ DA+ DLVC
Sbjct: 12 GDGSEDVPID---DKALENALHWCRYASAAYGPT-----MLTLLGLTDELPPLTLDDDVAL--RWCVTHHCRPGVKCDEDVKLLELSDSAACAPCHFVAVDREKKRVVLCIRGTSNLEDAVTDLVC 127
BLAST of mRNA_H-paniculata_contig8692.16629.1 vs. uniprot
Match: A0A7S4M7F5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M7F5_9EUKA) HSP 1 Score: 52.8 bits (125), Expect = 5.110e-5 Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1
Query: 316 VSRHTSIATEDVKGIVTTGSLKERAFLVAVDHSTRSVVLSIRGTYNVYDAMVDLVCNS 489
+ HT I+ +D+ T S A VAVDH T SVVL+IRGT+++ DA+ DL+ +S
Sbjct: 163 ICEHTGISLDDIIATKWTSSDFHPAHFVAVDHRTESVVLAIRGTFHIKDALTDLIAHS 220
BLAST of mRNA_H-paniculata_contig8692.16629.1 vs. uniprot
Match: A0A8H7VEL7_9FUNG (Lipase_3 domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VEL7_9FUNG) HSP 1 Score: 52.4 bits (124), Expect = 7.170e-5 Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = 1
Query: 145 DASDREAMAKAAHFSSFAAAAYGVMG-NFAKLKELVAKEESMPPAELLYDMALLKKWYVSRHTSIATEDVKGI---VTTGSLKERAFLVAVDHSTRSVVLSIRGTYNVYDAMVDLVC 483
D +DR M +A H+ +A AYG G + +E P + L + R ++ ED+ G + G++ + ++ VA+D S +++VLSIRGT+++YDA+ DLVC
Sbjct: 178 DINDRTLMDEACHYFDYALMAYGWRGLRYLGSYGQYIREARHPRSNRLA---------IIRFLNLHPEDLLGYEYGLRKGAVFQPSYYVAIDRSRKAIVLSIRGTWSLYDAITDLVC 285 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8692.16629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8692.16629.1 >prot_H-paniculata_contig8692.16629.1 ID=prot_H-paniculata_contig8692.16629.1|Name=mRNA_H-paniculata_contig8692.16629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp DTKLSADEKTRFPVNLLVLKAMHDRERLATLAASVVVVGGDTSDDDTLDAback to top mRNA from alignment at H-paniculata_contig8692:938..7240+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8692.16629.1 ID=mRNA_H-paniculata_contig8692.16629.1|Name=mRNA_H-paniculata_contig8692.16629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6303bp|location=Sequence derived from alignment at H-paniculata_contig8692:938..7240+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8692:938..7240+ >mRNA_H-paniculata_contig8692.16629.1 ID=mRNA_H-paniculata_contig8692.16629.1|Name=mRNA_H-paniculata_contig8692.16629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig8692:938..7240+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |