mRNA_H-paniculata_contig869.16627.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Match: A0A6H5K3W8_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3W8_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.350e-45 Identity = 102/160 (63.75%), Postives = 113/160 (70.62%), Query Frame = 3
Query: 168 MRDPGDQRMDSSVADDVMPXXXXXXXXXXXXXQHMEIDADGNFDLGDNFASPTEVSTGCFSRLSPTFVVYMAAFVSSLTSVLLGYDVGVISGAIKYIVLDFGLSTLQKGVIVSSLNLVAAGGGLIAGTVSDALGRKKSIAAACVVFITGSIIKIAANGFG 647
MR G +DSSV D + +E D D + F EVS+ C RLSPT +VYM+AFVSSLTSVLLGYDVGVISGAIKYI DFGLSTLQK +IVSSLNLVAAGGGLIAG+VSD LGRK+SIAAAC+VFITGSIIKIAA FG
Sbjct: 1 MRPVGATTVDSSVMDVTADSVGSGPAAAATGLEMVENDRDEV----EEFHGEGEVSSQCCGRLSPTAIVYMSAFVSSLTSVLLGYDVGVISGAIKYIQEDFGLSTLQKAIIVSSLNLVAAGGGLIAGSVSDTLGRKRSIAAACLVFITGSIIKIAAQSFG 156
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Match: D8LJ49_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ49_ECTSI) HSP 1 Score: 100 bits (249), Expect = 6.820e-21 Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 3
Query: 351 RLSPTFVVYMAAFVSSLTSVLLGYDVGVISGAIKYIVLDFGLSTLQKGVIVSSLNLVAAGGGLIAGTVSDALGRKKSIAAACVVFITGS 617
R+S T ++Y+ A SSLTSVLLGYDVGV+S AI I D GLS LQ ++V SLN++AA GGLIAG SDALGRK +IA AC +FITG+
Sbjct: 85 RISATALIYLCALCSSLTSVLLGYDVGVMSAAILDIEEDMGLSPLQAEILVGSLNVIAAFGGLIAGKASDALGRKTAIAIACGIFITGA 173
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Match: D7FTG6_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG6_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 2.620e-19 Identity = 53/92 (57.61%), Postives = 69/92 (75.00%), Query Frame = 3
Query: 369 VVYMAAFVSSLTSVLLGYDVGVISGAIKYIVLDFGLSTLQKGVIVSSLNLVAAGGGLIAGTVSDALGRKKSIAAACVVFITGSIIKIAANGF 644
+VY+ A SSL S+LLGYDVGV+SGA ++I D GLST+Q V+V SLN+VAA GGL+AG +D LGRK + A ACVVFITG+ + ++ F
Sbjct: 115 LVYLCAACSSLCSILLGYDVGVMSGAKEFIRPDLGLSTVQNEVMVGSLNIVAAFGGLVAGKAADRLGRKPTTALACVVFITGATMMTLSHTF 206
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Match: A0A7S2V4X1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4X1_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.650e-18 Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 3
Query: 342 CFSRLSPTFVVYMAAFVSSLTSVLLGYDVGVISGAIKYIVLDFGLSTLQKGVIVSSLNLVAAGGGLIAGTVSDALGRKKSIAAACVVFITGSIIKIAANGF 644
C L PT +V++ S+TS+LLGYDVG++SGA+ +I D LS +Q+ V+V +LN+VAA GGL+AG ++D+LGR+KSI A + FI G A F
Sbjct: 122 CTRGLKPTTLVWLCCICVSMTSMLLGYDVGIMSGALYFINADLHLSPVQEEVLVGTLNMVAALGGLVAGPMADSLGRRKSIKVASLAFILGGATSCLATSF 222
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Match: A0A835Z5D9_9STRA (General substrate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5D9_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.820e-18 Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 3
Query: 369 VVYMAAFVSSLTSVLLGYDVGVISGAIKYIVLDFGLSTLQKGVIVSSLNLVAAGGGLIAGTVSDALGRKKSIAAACVVFITGSIIKIAANGFG 647
+VY+ A SSL SVLLGYDVGV+SGA +YI D LS Q VIV SLNLVAA G L+AG +DALGR+ +IA AC VFI G+ + + FG
Sbjct: 6 LVYLCAACSSLCSVLLGYDVGVMSGAKEYIQPDLELSDSQTAVIVGSLNLVAALGALMAGKAADALGRRVTIALACTVFIVGAAMMAGSGSFG 98
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Match: A0A4D9D9C2_9STRA (MFS domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9C2_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.850e-18 Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = 3
Query: 369 VVYMAAFVSSLTSVLLGYDVGVISGAIKYIVLDFGLSTLQKGVIVSSLNLVAAGGGLIAGTVSDALGRKKSIAAACVVFITGSIIKIAANGF 644
+VY+ FV+SLTS+LLGYDVGV+S A KY+ + L+++Q VI+ SLNLVAA GGLIAG +D GR ++IA AC++F+TGS A F
Sbjct: 23 LVYLCGFVASLTSILLGYDVGVMSVARKYVDMQLSLTSVQSEVIMGSLNLVAALGGLIAGKTADRFGRNRAIALACLIFLTGSACMTLAWNF 114
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Match: A0A6A7G7L9_9CRUS (Polyol transporter 4 n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G7L9_9CRUS) HSP 1 Score: 88.6 bits (218), Expect = 8.270e-17 Identity = 47/91 (51.65%), Postives = 66/91 (72.53%), Query Frame = 3
Query: 372 VYMAAFVSSLTSVLLGYDVGVISGAIKYIVLDFGLSTLQKGVIVSSLNLVAAGGGLIAGTVSDALGRKKSIAAACVVFITGSIIKIAANGF 644
+Y+ ++SL ++LLGYDVGV+SGAI +I +F L+T + +IVSSLNL++ G L AG SD+ GRKK+IA A V+FI S++ ANGF
Sbjct: 34 LYVLTALASLGAILLGYDVGVMSGAILFIEPEFNLTTFETEIIVSSLNLISLFGALFAGKFSDSFGRKKTIAIASVIFIAASVLMALANGF 124
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Match: D8S624_SELML (Uncharacterized protein PLT3-2 n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S624_SELML) HSP 1 Score: 80.9 bits (198), Expect = 4.030e-14 Identity = 43/92 (46.74%), Postives = 65/92 (70.65%), Query Frame = 3
Query: 372 VYMAAFVSSLTSVLLGYDVGVISGAIKYIVLDFGLSTLQKGVIVSSLNLVAAGGGLIAGTVSDALGRKKSIAAACVVFITGSIIKIAANGFG 647
V A ++SL SVLLGYD+G++SGA+ +I D + LQ+ V+V SLNL++ GG++AG +SD++GRKK++A A V+F G+ + A FG
Sbjct: 50 VVWCALLASLNSVLLGYDIGIMSGAVLFIKEDLKIHELQEEVLVGSLNLISLVGGVLAGRLSDSIGRKKTMAIASVIFFLGAGVMGLAPNFG 141
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Match: D8RLL7_SELML (MFS domain-containing protein n=7 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RLL7_SELML) HSP 1 Score: 80.5 bits (197), Expect = 5.480e-14 Identity = 44/103 (42.72%), Postives = 72/103 (69.90%), Query Frame = 3
Query: 315 ASPTEVSTGCFSRLSPTFVVYMAAFVSSLTSVLLGYDVGVISGAIKYIVLDFGLSTLQKGVIVSSLNLVAAGGGLIAGTVSDALGRKKSIAAACVVFITGSII 623
A+ E G + +VV+ ++SL S+LLGYD+GV+SGA+ YI DF L+++Q+ ++V LNLV+ GGL+AG ++DA+GR+K++A A V+F G+++
Sbjct: 48 AAEVETVPGGRKKNYNKYVVF-CTLLASLNSILLGYDIGVMSGALLYIKDDFKLNSVQQEILVGILNLVSLVGGLMAGKLADAVGRRKTMATASVIFFVGALL 149
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Match: A0A7C8Z136_OPUST (MFS domain-containing protein (Fragment) n=3 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8Z136_OPUST) HSP 1 Score: 73.6 bits (179), Expect = 6.310e-13 Identity = 44/93 (47.31%), Postives = 63/93 (67.74%), Query Frame = 3
Query: 366 FVVYMAAFVSSLTSVLLGYDVGVISGAIKYIVLDFGLSTLQKGVIVSSLNLVAAGGGLIAGTVSDALGRKKSIAAACVVFITGSIIKIAANGF 644
+V+ A F +SL SVLLGYDVGV+SGAI +I D +S +Q V+V L++++ G L+ G SD++GRK ++A A VVF TG+ I A+ F
Sbjct: 65 YVIACAVF-ASLNSVLLGYDVGVMSGAIIFIQEDLKISDVQVEVLVGILSIISLFGSLLGGKTSDSIGRKWTMALAAVVFQTGAAIMAVASNF 156 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig869.16627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig869.16627.1 >prot_H-paniculata_contig869.16627.1 ID=prot_H-paniculata_contig869.16627.1|Name=mRNA_H-paniculata_contig869.16627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=161bp MRDPGDQRMDSSVADDVMPPVVEQQHHDRQQQQHMEIDADGNFDLGDNFAback to top mRNA from alignment at H-paniculata_contig869:28028..30751- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig869.16627.1 ID=mRNA_H-paniculata_contig869.16627.1|Name=mRNA_H-paniculata_contig869.16627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2724bp|location=Sequence derived from alignment at H-paniculata_contig869:28028..30751- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig869:28028..30751- >mRNA_H-paniculata_contig869.16627.1 ID=mRNA_H-paniculata_contig869.16627.1|Name=mRNA_H-paniculata_contig869.16627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=966bp|location=Sequence derived from alignment at H-paniculata_contig869:28028..30751- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |