mRNA_H-paniculata_contig8683.16624.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Match: A0A6H5KVR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR4_9PHAE) HSP 1 Score: 307 bits (786), Expect = 1.590e-91 Identity = 145/200 (72.50%), Postives = 163/200 (81.50%), Query Frame = 2
Query: 1106 KRSRSCSRERGGAG-------------SRGCGGVECSRCLKWCRASREQK-PITRTLAMEYWVRTPACKAAKSKHIEYIDNVAYSREQFIEETVFTCPFTGVQRDTLLERNMFPYDVPTDVEHWTLWSRKDLSESEMEEFVTMWAAENHPHAVEWECDNNEGDRSIDWYHVHVFFRLGCKDKSGARRDPDSAYNGPCGSA 1663
KR+RSCSRER G + GVEC+RCL+WCR+SR K PI RTL MEYWVRTP CKAAKSKHI++ID+VAYSREQFIEETVFTCPFTG +RD +LERNMFPYDVPTDVEHWTLWSR+DL + EME FV WAAENHPHAVEWECDNNEG+RSIDW+HVHVFFRLGC+D++G RDP S Y+GPCGSA
Sbjct: 252 KRNRSCSRERSSRGDSXGRSSKKAATTAESRSGVECARCLEWCRSSRTPKTPIPRTLPMEYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPKDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGSA 451
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Match: D8LK74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK74_ECTSI) HSP 1 Score: 306 bits (785), Expect = 2.570e-91 Identity = 149/201 (74.13%), Postives = 164/201 (81.59%), Query Frame = 2
Query: 1106 KRSRSCSRERGGAG-SRG-------------CGGVECSRCLKWCRASREQK-PITRTLAMEYWVRTPACKAAKSKHIEYIDNVAYSREQFIEETVFTCPFTGVQRDTLLERNMFPYDVPTDVEHWTLWSRKDLSESEMEEFVTMWAAENHPHAVEWECDNNEGDRSIDWYHVHVFFRLGCKDKSGARRDPDSAYNGPCGSA 1663
KR+RSCSRERG G SRG CG VEC+RCL+WCR SR K PI RTL M+YWVRTP CKAAKSKHI++ID+VAYSREQFIEETVFTCPFTG +R +LERNMFPYDVPTDVEHWTLWSRKDL EME FV WAAENHPHAVEWECDNNEG+RSIDW+HVHVFFRLGC+D++G RDP S Y+GPCGSA
Sbjct: 257 KRNRSCSRERGSRGDSRGRSSRKTPTTAESRCG-VECARCLEWCRPSRSPKTPIPRTLQMDYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRAIVLERNMFPYDVPTDVEHWTLWSRKDLPNDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGSA 456
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Match: A0A836CLJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ2_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.860e-39 Identity = 74/138 (53.62%), Postives = 93/138 (67.39%), Query Frame = 2
Query: 1208 EQKPITRTLAMEYWVRTPACKAAKSKHIEYIDNVAYSREQFIEETVFTCPFTGVQRDTLLERNMFPYDVPTDVEHWTLWSRKDLSESEMEEFVTMWAAENHPHAVEWECDNNEGDRSIDWYHVHVFFRLGCKDKSGAR 1621
EQ T + ME+WVR CK K++H+++ID+ SREQFIE+TVFT P TG RDT+LE NMFPY P DVEHWTLWSR D++ E++ +VT W N PH W D+N GDRSI W+HVHV+ + D S AR
Sbjct: 123 EQAVPTMDMPMEFWVRGEECKRLKTEHLDFIDSHYSSREQFIEDTVFTDPMTGEVRDTVLEPNMFPYQTPPDVEHWTLWSRSDMTHEEIQAWVTEWLMVNKPHVRRWNYDDNAGDRSIYWFHVHVYIQY--DDPSHAR 258
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Match: A0A6U1PGM4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PGM4_9STRA) HSP 1 Score: 128 bits (321), Expect = 5.360e-30 Identity = 64/138 (46.38%), Postives = 85/138 (61.59%), Query Frame = 2
Query: 1181 CLKWCRASREQKPITRTLAMEYWVRTPACKAAKSKHIEYIDNVAYSREQFIEETVFTCPFTGVQRDTLLERNMFPYDVPTDVEHWTLWSRKDLSESEMEEFVTMWAAENHPHAVEWECDNNEGDRSIDWYHVHVFFRL 1594
C K R+S RTL +EYW RT C K H+++ID SRE FI ET + RD +LE NMFPYD P D+ HWT+W R ++SE E+ ++V W + +P+ VEW D+N G+RSID YHVHV+FR+
Sbjct: 50 CKKRSRSSCNSNSPPRTLTIEYWDRTDDCINKKWDHMDFIDANFDSRENFILETAL------LNRDHMLEPNMFPYDTPEDILHWTMWCRWEMSEEELIKYVENWM-KKYPYIVEWNYDDNAGERSIDLYHVHVYFRV 180
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Match: A0A5D6YDG9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDG9_9STRA) HSP 1 Score: 117 bits (293), Expect = 4.760e-27 Identity = 59/123 (47.97%), Postives = 75/123 (60.98%), Query Frame = 2
Query: 1226 RTLAMEYWVRTPACKAAKSKHIEYIDNVAYSREQFIEETVFTCPFTGVQRDTLLERNMFPYDVPTDVEHWTLWSRKDLSESEMEEFVTMWAAENHPHAVEWECDNNEGDRSIDWYHVHVFFRL 1594
RTL +EYW R+ C K H++ ID+ SRE+ I T T TLLE NMFPY P +EHWTLWSR +LS+ E+E V +W AE PH + W D+N RSID +HVHV+FR+
Sbjct: 13 RTLVIEYWSRSDECLERKWDHLDKIDDSGLSREEHILAT------TLKGSRTLLEPNMFPYSTPAGIEHWTLWSRDELSDEEVERCVGIWIAEKAPHVLSWNFDDNPA-RSIDLFHVHVYFRV 128
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Match: A0A6A3KAU7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KAU7_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.250e-26 Identity = 56/123 (45.53%), Postives = 75/123 (60.98%), Query Frame = 2
Query: 1223 TRTLAMEYWVRTPACKAAKSKHIEYIDNVAYSREQFIEETVFTCPFTGVQRDTLLERNMFPYDVPTDVEHWTLWSRKDLSESEMEEFVTMWAAENHPHAVEWECDNNEGDRSIDWYHVHVFFR 1591
TRTLA++YW RT C K H++ +D++ SRE+ I T + +T LE NMFPYD P +EHWTLWSR ++ +E+EE+V W EN PH W D N RSID +HVHV+ +
Sbjct: 58 TRTLALQYWDRTDECLERKWAHMDMVDDLFESREELILATTLS------HTETALEPNMFPYDTPDGIEHWTLWSRHEMDNAEIEEYVCDWLRENAPHVERWNYDENLS-RSIDIFHVHVYLQ 173
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Match: K3X7P6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7P6_GLOUD) HSP 1 Score: 113 bits (282), Expect = 1.170e-25 Identity = 53/125 (42.40%), Postives = 73/125 (58.40%), Query Frame = 2
Query: 1220 ITRTLAMEYWVRTPACKAAKSKHIEYIDNVAYSREQFIEETVFTCPFTGVQRDTLLERNMFPYDVPTDVEHWTLWSRKDLSESEMEEFVTMWAAENHPHAVEWECDNNEGDRSIDWYHVHVFFRL 1594
+ RTL ++YW R+ C K H++ ID V+ SRE+ I T +LE NMFPY P +EHWTLWSR ++ + E+E +V+ W EN PH W D N RSID +HVHV+F++
Sbjct: 2 MQRTLIIDYWDRSEECLERKWDHMDMIDEVSPSREEHILSTTLR------DEHIILEPNMFPYTTPDGIEHWTLWSRNEMGDQEVEAYVSSWITENAPHVKSWNFDENSS-RSIDLFHVHVYFQV 119
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Match: A0A3M6VCZ3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCZ3_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.530e-25 Identity = 55/122 (45.08%), Postives = 73/122 (59.84%), Query Frame = 2
Query: 1226 RTLAMEYWVRTPACKAAKSKHIEYIDNVAYSREQFIEETVFTCPFTGVQRDTLLERNMFPYDVPTDVEHWTLWSRKDLSESEMEEFVTMWAAENHPHAVEWECDNNEGDRSIDWYHVHVFFR 1591
RTL +EYW RT C K H++ +D + SRE+ I T T ++T+LE NMFPYD P + HWTLWSR +++ +E+EEFV W EN P W D N RSID +HVHV+ +
Sbjct: 2 RTLVVEYWDRTDECLERKWAHMDMVDRMFNSREELILAT------TLHHKETVLEPNMFPYDTPKGISHWTLWSRHEMNHTEIEEFVCNWIRENAPQVERWNYDENLS-RSIDIFHVHVYLK 116
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Match: A0A329SRC6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SRC6_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.070e-24 Identity = 54/121 (44.63%), Postives = 72/121 (59.50%), Query Frame = 2
Query: 1223 TRTLAMEYWVRTPACKAAKSKHIEYIDNVAYSREQFIEETVFTCPFTGVQRDTLLERNMFPYDVPTDVEHWTLWSRKDLSESEMEEFVTMWAAENHPHAVEWECDNNEGDRSIDWYHVHVF 1585
TRTL +EYW RT C K H+E +D SRE+ I T + +T+LE NMFPY P+ +EHWTLWSR ++ ++E+E+FV W +N H W D N RSID +HVHV+
Sbjct: 44 TRTLRLEYWGRTDECLERKWAHMEMVDGFFESREELILATTLS------NEETILEPNMFPYHTPSGIEHWTLWSRHEMDDTEIEKFVCNWLRKNAHHVESWNYDENLS-RSIDIFHVHVY 157
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Match: A0A1V9ZCS8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCS8_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.180e-23 Identity = 51/124 (41.13%), Postives = 77/124 (62.10%), Query Frame = 2
Query: 1226 RTLAMEYWVRTPACKAAKSKHIEYIDNVAYSREQFIEETVFTCPFTGVQRDTLLERNMFPYDVPTDVEHWTLWSRKDLSESEMEEFVTMWAAENHPHAVEWECDNNEGDRSIDWYHVHVFFRLG 1597
RTL +EYW R+ CK K H++ +D+ + + EE ++ G R + +E NMFPY+ P +EHWTLWSR DL ++++E+V W + N PH W D+N +RSID +HVHV+ ++G
Sbjct: 139 RTLKLEYWTRSEECKERKWDHLDKLDSEEHGMTR--EEHIYATTLAG--RMSYMEPNMFPYETPEGIEHWTLWSRNDLRHADVQEYVERWISTNAPHVSAWNYDDNP-ERSIDIFHVHVYLQVG 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8683.16624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8683.16624.1 >prot_H-paniculata_contig8683.16624.1 ID=prot_H-paniculata_contig8683.16624.1|Name=mRNA_H-paniculata_contig8683.16624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=445bp MSCHGKQVSDDGYRSSSEPAIKRSRVTAAVAQQSQRSDKNGTYCCNETPAback to top mRNA from alignment at H-paniculata_contig8683:3762..8393+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8683.16624.1 ID=mRNA_H-paniculata_contig8683.16624.1|Name=mRNA_H-paniculata_contig8683.16624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4632bp|location=Sequence derived from alignment at H-paniculata_contig8683:3762..8393+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8683:3762..8393+ >mRNA_H-paniculata_contig8683.16624.1 ID=mRNA_H-paniculata_contig8683.16624.1|Name=mRNA_H-paniculata_contig8683.16624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2670bp|location=Sequence derived from alignment at H-paniculata_contig8683:3762..8393+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |