mRNA_H-paniculata_contig8676.16616.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8676.16616.1
Unique NamemRNA_H-paniculata_contig8676.16616.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Match: A0A6H5KWL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL4_9PHAE)

HSP 1 Score: 491 bits (1264), Expect = 3.730e-157
Identity = 236/370 (63.78%), Postives = 292/370 (78.92%), Query Frame = 1
Query: 1651 PYRALSMILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFSTCFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDRGCPTHSPDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDLGKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDPPWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVDDMHRSVCDMNGEERRG----DRTSYLYADETAGQLEPGEREQHRVALIKQLLNSYRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHGGLGRRRAKNK 2748
            P R LSM+LAAAHS+G  +IGTYDT QL+P+C+SSGMSISRD V+RK +LE+AF TCFHVFAR+RD  ++EQVEMDDGLL+ILAAG+D+ EAQTRA++RF  GC    P   DFHLAYTRDCARF+AFRGL  C ESG WD LG K  +GA+YRDLG  GKV KNH Y ++RS+ E + V +AFD+G +LEET+L +AEAE +FDPP +CTVHAVQGRTVE RL+IHQARH ++D++W+ TA+SRATGPSNVRV+DD++RS  DM+  ER        +SY+YAD  A +L   E  QHR AL+++L  SY GRC+LC+ EL+W VYSERQ TLDRLDC+L HT GN+DVKC KCNRA G LGR ++K +
Sbjct:  448 PLRTLSMVLAAAHSSGTHVIGTYDTHQLQPVCESSGMSISRDNVNRKVILEKAFPTCFHVFARKRDKTVDEQVEMDDGLLHILAAGNDSHEAQTRAIERFGGGC-LDDPSPSDFHLAYTRDCARFYAFRGLLGCNESGGWDVLGHKTVVGAQYRDLGNPGKVHKNHMYNVIRSSAETVVVASAFDDGASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEGRLIIHQARHPYADVYWIYTAISRATGPSNVRVIDDIYRSKSDMSDRERASWVSRKVSSYIYADVAAERLGSDEGGQHREALVQELHRSYGGRCNLCNHELIWTVYSERQPTLDRLDCALPHTIGNVDVKCLKCNRARGSLGRGKSKKR 816          
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE)

HSP 1 Score: 493 bits (1268), Expect = 1.570e-151
Identity = 247/380 (65.00%), Postives = 294/380 (77.37%), Query Frame = 1
Query: 1651 PYRALSMILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFSTCFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDRGCPTHSPDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDLGKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDPPWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVDDMHRSVCDMNGEERRG----DRTSYLYADETAGQLEPGEREQHRVALIKQLLNSYRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHGGLGRRRAKNK-VDT--QDER 2769
            P R LSMILAAAH +G  +IGTYDT QL+P+C SSG SIS+D VDR+ +LE+AF  CFHVFAR+RD  +EEQVEMDDGLLYILAAG D+ EAQTRA++RF  GC   +P   DFHLAYTRDCARFHAFRGL  C E+G WD LG++  +GA+YRDLG  GKV KNH Y I+RS+ + + V +AFD  V+LEET+L +AEAE LFDPP +CTVHAVQGRTVE  L+IHQARHR +D+HWL TAVSRATGPS+VRV+DD+HRS  DM+  ER        +SY+YAD  AG+L P E  +HR AL+++LLNSY GRC  C+ ELVWAVYSE+Q TLDRLDCSL HT  N+DVKC +CNRA G LGR R K K VD   +DER
Sbjct: 1048 PLRTLSMILAAAHCSGTHVIGTYDTHQLQPVCDSSGRSISKDNVDRRVILEKAFPLCFHVFARKRDKTVEEQVEMDDGLLYILAAGDDSHEAQTRAIERFGGGC-LDNPSPSDFHLAYTRDCARFHAFRGLLGCDEAGGWDGLGRQTVVGAQYRDLGNLGKVHKNHTYKIIRSSADEVVVASAFDGAVSLEETSLCRAEAENLFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSSVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRRHREALVQELLNSYGGRCHRCTCELVWAVYSEQQPTLDRLDCSLPHTAENVDVKCLRCNRARGSLGRGRTKKKKVDRSGKDER 1426          
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI)

HSP 1 Score: 485 bits (1248), Expect = 3.740e-150
Identity = 236/370 (63.78%), Postives = 291/370 (78.65%), Query Frame = 1
Query: 1651 PYRALSMILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFSTCFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDRGCPTHSPDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDLGKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDPPWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVDDMHRSVCDMNGEERR----GDRTSYLYADETAGQLEPGEREQHRVALIKQLLNSYRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHGGLGRRRAKNK 2748
            P R LSM+LAAAHS+G  +IGTYDT QL+P+C+SSGMSISRD V+RK +LE+AF TCFHVFAR+RD  ++EQVEMDDGLL+ILAAG+D+ EAQTRA++RF  GC    P   DFHLAYTRDCARF+AFRGL  C ESG WD LG K  +GA+YRDLG  G+V KNH Y I+RS+G+ + V +AFD   +L+ET+L +AEAE LFDP  ACTVHAVQGRTVE RL+IHQARH ++D++W+ TA+SRATGPSNVRV+DD+HRS  DM+  ER     G  +SY+YAD  A +L   E  Q+R AL+++L  SY GRC+LC+ +LVWAVYSERQ TLDRLDC+L HT  N+DVKC KCNRA G LGR ++K +
Sbjct:  877 PLRTLSMVLAAAHSSGTHVIGTYDTHQLQPVCESSGMSISRDNVNRKFILEKAFPTCFHVFARKRDKTVDEQVEMDDGLLHILAAGNDSHEAQTRAIERFGGGC-LDDPSPSDFHLAYTRDCARFYAFRGLLGCNESGGWDVLGHKTVVGAQYRDLGNLGRVHKNHNYNIIRSSGDTVVVASAFDGAASLQETSLCRAEAENLFDPSGACTVHAVQGRTVEGRLIIHQARHPYADVYWIYTAISRATGPSNVRVIDDIHRSKSDMSDRERASWISGKVSSYIYADVAAERLGSDEGGQYREALVQELQRSYGGRCNLCNHDLVWAVYSERQPTLDRLDCALPHTIDNVDVKCLKCNRARGSLGRGKSKKR 1245          
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 6.970e-149
Identity = 240/371 (64.69%), Postives = 284/371 (76.55%), Query Frame = 1
Query: 1651 PYRALSMILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFSTCFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDRGCPT-HSPDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDLGKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDPPWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVDDMHRSVCDMNGEERRG----DRTSYLYADETAGQLEPGEREQHRVALIKQLLNSYRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHGGLGRRRAKNK 2748
            P R LSMILAAA  +G  +IGTYDT QL+P+C+SSGMSIS D VDRK +LE+AF TCFHVFAR+RD   EEQVEMDDGLLYILAAG+++ EAQTRA++RF R CPT + P   +FHLAYTRDCARFHAFRGL  C   G WD LG+   IGA+YRDLG  GK+ KNH Y IVRS+ + I V +AFD  V+LEET+L +A AE LFDPP +CTVHAVQGRTVE RL+IHQARHR +D+HWL TAVSRATGPSNV V+DD HR   +M+  ER        +SY+YAD  +G+L   E  QHR AL ++L  +YRG C+LC  ELVWAVYSERQ TLDRLDC+L HT GN+DVKC KCNRA G LGR ++K +
Sbjct:  855 PLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEIVVASAFDCAVSLEETSLCRAVAENLFDPPGSCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVWVIDDAHRRDSNMSDRERASWVSRKVSSYIYADIASGRLGSDEGGQHREALAQELHRAYRGTCNLCHHELVWAVYSERQPTLDRLDCALPHTIGNVDVKCLKCNRARGSLGRGKSKKR 1225          
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI)

HSP 1 Score: 485 bits (1248), Expect = 1.830e-148
Identity = 246/372 (66.13%), Postives = 292/372 (78.49%), Query Frame = 1
Query: 1660 ALSMILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFSTCFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDRGCPTH-SPDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDLGKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDPPWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVDDMHRSVCDMNGEERRGDRT----SYLYADETAGQLEPGEREQHRVALIKQLLNSYRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHGGLGRRRAKNKVDTQ 2760
            ALSMI AA HS+GV +IGTYDT QL+P+ +SSGMSIS D VDR+ VLERAF TCFH+FAR+RD  I+EQVEMDD LLYIL AG ++ EAQTRAL+RF    PT     V DFHLAYTR+CARFHAFRGL+RC E+G WD LGQ A +GA+YRDLGK+GKV KNHAY IVRS+ + + V++AFD+G TLEET LS+A AE LFDPP +CTVHAVQGRTVE +LVIHQARHR+SD++WL TA+SRATGPSN  V+DD+HRSV DM    RR   T    SYL AD  AG+L+ G+   H+ ALI++LL SYRG C+ CS E+VWAVYSERQ TLDRLD +L HT GN+DVKC +CNRA GGLGR   K K + +
Sbjct: 1060 ALSMIFAATHSSGVHVIGTYDTHQLQPVRESSGMSISVDNVDRQLVLERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAEAQTRALERFGGIEPTGPGTHVSDFHLAYTRECARFHAFRGLTRCNEAGGWDALGQSAVVGAQYRDLGKTGKVHKNHAYHIVRSSADSVVVQSAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVEGKLVIHQARHRYSDVYWLYTAISRATGPSNAVVLDDVHRSVSDMPEHTRRSWATTKVSSYLRADVAAGRLDDGDGGHHKDALIEELLRSYRGTCNSCSLEVVWAVYSERQPTLDRLDYALPHTPGNVDVKCLRCNRARGGLGRGLTKKKKEAE 1431          
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE)

HSP 1 Score: 490 bits (1262), Expect = 3.240e-148
Identity = 244/372 (65.59%), Postives = 288/372 (77.42%), Query Frame = 1
Query: 1651 PYRALSMILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFSTCFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDRGCPTHSPDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDLGKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDPPWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVDDMHRSVCDMNGEERRG----DRTSYLYADETAGQLEPGEREQHRVALIKQLLNSYRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHGGLGRRRAKNKVD 2754
            P R LSM++AAA+ +G  +IGTYD  QL+P+C SSGMSISRD VDRK +LE+AF  CFHVFAR+RD  IE+QVEMDDGLL+ILAAG+D+ EAQTRA++RF   C   +P   DFHLAYTRDCARFHAFRGL  C E G WD LG    +GA+YRDLGKSGK+ KNH Y+I RS+ + + V +AFD  V+LEET+L + EAE LFDPP ACTVHAVQGRTVE RL+IHQARH  +D+HWL TAVSRATGPSNV V++D+HRS  +M+  ER        +SY+YAD TAG+L P E  QHR AL ++LLNSY GRCSLCS ELVWAVYSERQ TLDRLDCSL HT  N+DVKC +CNRA G LGR R K K +
Sbjct: 1083 PLRTLSMVMAAAYGSGTHVIGTYDVHQLQPVCDSSGMSISRDNVDRKVILEKAFPMCFHVFARKRDKTIEDQVEMDDGLLHILAAGNDSHEAQTRAIERFGGRCHF-NPSPSDFHLAYTRDCARFHAFRGLLGCNELGGWDSLGHATLVGAQYRDLGKSGKIHKNHTYSITRSSADEVVVASAFDGAVSLEETSLCRVEAENLFDPPGACTVHAVQGRTVEGRLIIHQARHFHADVHWLYTAVSRATGPSNVMVIEDIHRSESNMSDLERISWVYRKISSYIYADVTAGRLGPDEGMQHREALAEELLNSYGGRCSLCSCELVWAVYSERQPTLDRLDCSLPHTVDNVDVKCLRCNRARGSLGRGRTKKKKE 1453          
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Match: A0A6H5KBM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM1_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 5.880e-146
Identity = 240/373 (64.34%), Postives = 284/373 (76.14%), Query Frame = 1
Query: 1660 ALSMILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFSTCFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDR----GCPTHSPDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDLGKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDPPWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVDDMHRSVCDMNGEERRGDRT----SYLYADETAGQLEPGEREQHRVALIKQLLNSYRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHGGLGRRRAKNKVD 2754
            ALSMILAAAHS GV +IGTY+T QL+P  + SG+SIS D VDR+ VLER+F  CFH+FAR+R   I+EQVE+DD LLYIL A +++ +AQ RAL+RF      GC    P V DFHLAYTRDC RFHA RGL+RC E+G WD LGQ   +GA+YRDLGK GKV KNHAY IVRS+ + + V++ FD G TLEET LS+A A+ LFDPP +CTVHAVQGRTV+ +LVIHQARHRFSD++WL TA+SRATGP NV ++DD+HRSV DM+   RR   T    SYL AD T G+L+ GE  QH  AL + LLNSY GRC+ C+ ELVWAVYSERQ TLDRLDC+L HT GN+DVKC KCNRA GGLGR  AK K D
Sbjct:  716 ALSMILAAAHSKGVHVIGTYETHQLQPAREGSGLSISVDNVDRQVVLERSFPICFHLFARKRVRTIDEQVEVDDSLLYILDAANNSAKAQIRALERFGEIGPAGC---DPHVSDFHLAYTRDCPRFHAVRGLTRCNEAGGWDALGQSGVVGAQYRDLGKVGKVHKNHAYHIVRSSDDSVVVQSTFDGGATLEETILSRAAADILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPLNVVILDDIHRSVSDMSEHARRSWATRKVSSYLRADVTGGRLDEGEGNQHNNALAQALLNSYGGRCNSCTIELVWAVYSERQPTLDRLDCALPHTPGNVDVKCLKCNRARGGLGRGLAKKKKD 1085          
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE)

HSP 1 Score: 476 bits (1224), Expect = 8.680e-145
Identity = 233/370 (62.97%), Postives = 288/370 (77.84%), Query Frame = 1
Query: 1651 PYRALSMILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFSTCFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDRGCPTHSPDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDLGKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDPPWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVDDMHRSVCDMNGEERRGDRT----SYLYADETAGQLEPGEREQHRVALIKQLLNSYRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHGGLGRRRAKNK 2748
            P R LSMILAAAHS+G  +IGTYDT QL+P+C SSGMSISRD VDRK +LE+AF T F+VFAR RD  IE+QV+MDDGLL+ILAAG+D+ EA +RA+KRF  G    +P   DFHL YTR+CARFHAFRGL  C E+GDWD LG + A+GA+YRDLG  GKV K H Y ++ S+ + + V +AFD+G +LEET+L +AEAE +FDPP +CTVHAVQGRTVE RL+IHQARHR +D+HWL T VSRATGPSNVRV+DD+HRS  +M+  ER    T    SY+YAD  AG+++  +  QHR AL+++L  SY GRC+LC+ EL+W + SERQ TLDRLDCSL HT GN+DVKC KCNRA GGLGR +++ K
Sbjct: 1111 PLRTLSMILAAAHSSGTHVIGTYDTNQLQPVCDSSGMSISRDNVDRKVILEKAFPTFFYVFARRRDKTIEDQVQMDDGLLHILAAGNDSDEAHSRAIKRFG-GQHIENPSPSDFHLVYTRECARFHAFRGLLGCNEAGDWDGLGCQTAVGAQYRDLGNPGKVHKIHMYNVIGSSADTVVVASAFDDGASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTGVSRATGPSNVRVIDDIHRSESNMSDRERVSWVTRKVSSYIYADVAAGRIKSDDGGQHREALVQELHRSYGGRCNLCNRELIWTINSERQPTLDRLDCSLPHTIGNVDVKCLKCNRARGGLGRGKSEKK 1479          
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Match: A0A6H5JTY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTY9_9PHAE)

HSP 1 Score: 468 bits (1205), Expect = 5.090e-144
Identity = 236/381 (61.94%), Postives = 288/381 (75.59%), Query Frame = 1
Query: 1651 PYRALSMILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFSTCFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDRGCPTHS-PDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDLGKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDPPWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVDDMHRSVCDMNGEERRG----DRTSYLYADETAGQLEPGEREQHRVALIKQLLNSYRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHGGLGRRRAKNK-VDT--QDER 2769
            P R LSMILAAAHS+G  +IGTYDT QL+P+C SSGMSIS+D VDR  +LE++F  CFHVFAR+RD I+EEQVEMDDGLLYILAAG D+ EAQT+A++RF    PT S P    FHLAYT DCARFHAFRGL  C E+G WD LG++  +GA+YRDLG  G+V KNH Y I+RS+ + + V +AFD  V+LEET+L + E   LFDPP +CTVHAVQGR VE  L+IHQARH  +++HWL TAVSRATGPSNVRV+DD+HRS  DM G  R        +SY+YAD TAG+L P E  +HR AL+++LLNSY GRC+LC+ E++WA++SER   LDRLDCSL +T  N+DVKC +CNRA G L R R K K VD   +DER
Sbjct:  856 PLRNLSMILAAAHSSGTHVIGTYDTHQLQPVCDSSGMSISKDNVDRSVILEKSFPICFHVFARKRDKIVEEQVEMDDGLLYILAAGDDSHEAQTQAIERFGGEFPTASDPSPSIFHLAYTTDCARFHAFRGLLGCDEAGGWDGLGRQTVVGAQYRDLGNLGRVHKNHTYNIIRSSADEVVVASAFDGAVSLEETSLCRVETGNLFDPPGSCTVHAVQGRKVEGTLIIHQARHPHAEVHWLYTAVSRATGPSNVRVIDDIHRSESDMPGRVRTSWVSRKVSSYVYADVTAGRLGPEEGGRHREALVQELLNSYGGRCNLCTCEIIWAIFSERHPMLDRLDCSLPNTAENVDVKCLRCNRARGSLSRGRTKKKKVDGSGKDER 1236          
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Match: A0A6H5K992_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K992_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 4.320e-143
Identity = 236/370 (63.78%), Postives = 277/370 (74.86%), Query Frame = 1
Query: 1651 PYRALSMILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFSTCFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDRGCPTHSPDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDLGKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDPPWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVDDMHRSVCDMNGEERRG----DRTSYLYADETAGQLEPGEREQHRVALIKQLLNSYRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHGGLGRRRAKNK 2748
            P R  SMILAAAH +G  +IGTYD  QL+ +  SSGMS SRD VDR+ VLE+AF  CFH+FAR+RD   EEQVEMDDGLLYIL AGHD   AQTRA++RF  G  T+     DFHLAYTRDCARFHAFRGL  C E G WD LG    +GA+YRDLG+SGK+ K H Y++VRS+ + + VE+AFD+G +L ET+L +AEAE LFDPP +CTVH+VQGRTVE RLVIHQARH  +D++WL TA+SRATGPSNV +VDD+HRS  +M+   R        +SY+YAD TAG+LEP E  QHR AL ++LLNSY GRC LCS ELVWAVYSERQ TLDRLDCSL HT  N DVK  +CNRA G  GR R K K
Sbjct:  932 PLRTPSMILAAAHCSGTHVIGTYDMHQLQTVEDSSGMSTSRDNVDRRVVLEKAFPICFHLFARKRDKTTEEQVEMDDGLLYILGAGHDRHMAQTRAIERFGCGRSTYHHSPSDFHLAYTRDCARFHAFRGLLGCNELGGWDLLGHAKLVGAQYRDLGRSGKIQKKHIYSVVRSSADTVVVESAFDDGASLGETSLCRAEAENLFDPPGSCTVHSVQGRTVEGRLVIHQARHPHADMNWLYTAISRATGPSNVSIVDDVHRSKSNMSDRGRVSWVSRKISSYIYADVTAGRLEPDEGMQHREALAEELLNSYGGRCCLCSCELVWAVYSERQPTLDRLDCSLPHTPDNADVKFLRCNRARGSQGRGRTKRK 1301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8676.16616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWL4_9PHAE3.730e-15763.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSM3_9PHAE1.570e-15165.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQN9_ECTSI3.740e-15063.78Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7FV89_ECTSI6.970e-14964.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LFQ2_ECTSI1.830e-14866.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JCS9_9PHAE3.240e-14865.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBM1_9PHAE5.880e-14664.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2B8_9PHAE8.680e-14562.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTY9_9PHAE5.090e-14461.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K992_9PHAE4.320e-14363.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8676contigH-paniculata_contig8676:136..3356 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score481.1
Seed ortholog evalue4.6e-133
Seed eggNOG ortholog2880.D8LFQ2
Hectar predicted targeting categoryother localisation
EggNOG OGs2E3IK@1,2SAKM@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-16_001060.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size2772
Cds size1104
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8676.16616.1prot_H-paniculata_contig8676.16616.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8676 2237..3356 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931089.399278-UTR-H-paniculata_contig8676:135..11601622931089.399278-UTR-H-paniculata_contig8676:135..1160Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8676 136..1160 +
1691481585.0369265-UTR-H-paniculata_contig8676:135..11601691481585.0369265-UTR-H-paniculata_contig8676:135..1160Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8676 136..1160 +
1622931089.416268-UTR-H-paniculata_contig8676:1593..22361622931089.416268-UTR-H-paniculata_contig8676:1593..2236Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8676 1594..2236 +
1691481585.0505486-UTR-H-paniculata_contig8676:1593..22361691481585.0505486-UTR-H-paniculata_contig8676:1593..2236Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8676 1594..2236 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931089.4321184-CDS-H-paniculata_contig8676:2236..30381622931089.4321184-CDS-H-paniculata_contig8676:2236..3038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8676 2237..3038 +
1691481585.0641031-CDS-H-paniculata_contig8676:2236..30381691481585.0641031-CDS-H-paniculata_contig8676:2236..3038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8676 2237..3038 +
1622931089.450108-CDS-H-paniculata_contig8676:3054..33561622931089.450108-CDS-H-paniculata_contig8676:3054..3356Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8676 3055..3356 +
1691481585.0741591-CDS-H-paniculata_contig8676:3054..33561691481585.0741591-CDS-H-paniculata_contig8676:3054..3356Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8676 3055..3356 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8676.16616.1

>prot_H-paniculata_contig8676.16616.1 ID=prot_H-paniculata_contig8676.16616.1|Name=mRNA_H-paniculata_contig8676.16616.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=368bp
MILAAAHSNGVDIIGTYDTLQLEPICKSSGMSISRDEVDRKAVLERAFST
CFHVFARERDNIIEEQVEMDDGLLYILAAGHDNMEAQTRALKRFDRGCPT
HSPDVLDFHLAYTRDCARFHAFRGLSRCIESGDWDPLGQKAAIGARYRDL
GKSGKVLKNHAYTIVRSTGELIGVENAFDEGVTLEETALSQAEAETLFDP
PWACTVHAVQGRTVEVRLVIHQARHRFSDLHWLCTAVSRATGPSNVRVVD
DMHRSVCDMNGEERRGDRTSYLYADETAGQLEPGEREQHRVALIKQLLNS
YRGRCSLCSSELVWAVYSERQLTLDRLDCSLAHTTGNIDVKCFKCNRAHG
GLGRRRAKNKVDTQDER*
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mRNA from alignment at H-paniculata_contig8676:136..3356+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8676.16616.1 ID=mRNA_H-paniculata_contig8676.16616.1|Name=mRNA_H-paniculata_contig8676.16616.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3221bp|location=Sequence derived from alignment at H-paniculata_contig8676:136..3356+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCTCAACATGGCTGTCGGGCGAACAAGACATCCTGGTCTTGAAACTCGA ACACCTCGAGAAGTGGTTCCACGTGACCAGGCGAGCGTCGTCGTGTGGTC GTATAGGGGCTTGGGGACCGAAATACTTCACACCACGAGACAAGAAAGCA ATTCTACGCCCTCCAATACTGCACGTAGAGGTCTTCAGGGCCACGTGTAC CGGTTGGAGTTCGAGGGGCCATGGGGTGAACGCTTCGATGTCCGCGGAGG GGAGACCGCTCCATCCCTAGACGTAGCTATCGAGCACTGCGTTCGGACCC GGCACCTGTTTCGTCGTATTGCCGAGGTAGCCGAAGAGGGGCAACAAGAA GAGACGATAAACTGGGGCAGCAGAACTTTCGCGTATTGCGCCGACCTCGT TAGCGCGACCCAGAACACGAAGCCATCAAGCGAGACCACCAGACTGCACG GAAGCGCAAGAGAAGAGTCGACAACAAGGCTGACTACAAGACTTGGTACA CGCGTCCGGGTACGGCTCTCGACGAACTGATGCTCCATCTCCACCTCGAC GGCGTCTCACGCAGGGTCAGGCTTACCAACTACAGCCGTTTGGACTCCCT GTCTTTGCCAGCACATGGCACCACTGTCCGAACCTGGTGCGACGCAAGTA TAGGCGGACTGGATCCTAATCTCCTCGAATGCGACCAAGCTACTCGCCCG ATCGAGCTGCAAAACATCCTCGGCCGAAAACTCTATCGCGGTGTCATGGA TTTTCGGGTCGCGAGTCAGTACAGCCCGTCCTTCCTTGCGCTGCTCGAGG TATGTTGGAGGGGGCCGATCGTCGGGGCAGAAGACGCGTCGGAGAATATC TCACGGGCCTGAAGATTGGCAGTGCGACATCAACGGGTCTCACACGACCA CGATGCTGAGCATGGAGACGGCTCCCACGTTCGGCCACACGAACGACGTG GAGGAGTTCGATGGCCACGAGATCGAGAATTGGACCCTATACGTTGTTTG CCTGGACGCAGGCGGCACCCCCGATGTGTTTCTGAACGCGGAGGTTACCC CAGTTTTCGGCCGGAGCAACAAGCGGTACAAGGAGCTCGCTCACAGGCTC GCTTCTCACTGCATCACCCATTTCGTGCGACCGGCGAGGACGGTTCAAAA ATGCAACACACCCAACCTTGTAAGGACATTCTCTCCCAGAATCTGGGGGA ACCCCTTCTACAAGAAGCGGACGCTCCTCGCAAGTTCAAGAAAGGGGTAT TTGTGCGCACTAGCGGTATGTTGCAGCAGAGGTACGCCAAAAAGATGGAT GCGGTCATGGTGACCGGCTGCAACGAGGCGTTTGCGGTGGAGAGGAAGAT CGTGCCTATCCTGGGCGAAGTAGAGCGCCTGAAGGCTGAGTTAAGGACGG ACAAAGGGGAGCCGGGCGTCTAGGCCCTTGACAGCGGGGCGCGTACCTTT GTTTCGAGGCTAGATTAGTATGGTACAGAGACGGCTTCTGGCCCCTCGGG GCGCTGATTTTGGACGAAACCCGACTACGTGTGTTGGAGGTACGGAACGT TCTAGAAACATGTGGGGGTCCGCCCTCAGCTACCAATGCGATACCGTGTT CAAGGGATCTCTTCAGCTGCAGGGGGGGGCAAAGGGTCGTTTCGGCGACT TCTTCAACGGCGAGCTCAACCCCCCCGGCACTATCAAGGTTGAACCCGCT CTCAAGAACCCGCTGTCTTCCGAGAGGCGTATCTTCGGCGGCATCGACGT GAAGCTAGCCCTGGATGAGCTACCGCCCGCCATGAGGCATGTACCATGCC CACCGAGGAGAGCGCTGCGTGTCATCCCGCTGTGGGATGGCCTCGGCGAT AGCTTCGCATTCAGCCTGGTATTCTCTCAGGAAGGACACCAAACGGAAGA TATAGTCATCTGCAAAGCCGAGTCACGAGCAACTCTTGACCGACTGCTCT CTGGATGGAGTGATAGGACCGCTGATCACCAGCTCGGGTTCTAACTTGGC GCCGATTCCCACGTAAGGAAGACTGCCGGGTCTATAGACATCCCTCGAGT CGATGTTGTCATCGTAGAGGAAATTGCGTAAATCCCTATCGTGCTCTCAG CATGATCCTCGCGGCGGCACACAGCAATGGTGTCGACATCATTGGGACCT ACGACACGCTCCAGCTTGAGCCCATTTGCAAGAGCAGCGGCATGTCCATT AGCAGGGACGAAGTCGACCGGAAGGCCGTCCTCGAGCGAGCGTTTTCCAC GTGCTTTCATGTGTTCGCCCGCGAGAGGGACAACATTATTGAAGAGCAGG TAGAGATGGACGACGGTCTATTATACATTCTTGCTGCTGGTCATGACAAT ATGGAGGCGCAGACCAGAGCCCTGAAGAGATTTGACAGAGGGTGCCCGAC ACACAGCCCCGATGTTTTAGATTTCCACCTCGCTTACACAAGAGATTGCG CTCGATTTCATGCCTTCCGGGGACTGTCGAGATGCATCGAGTCCGGGGAT TGGGACCCGCTGGGCCAAAAAGCGGCGATTGGTGCACGATACCGGGATCT GGGGAAGTCCGGCAAGGTTCTCAAAAATCACGCCTACACCATCGTCCGTT CCACAGGCGAGCTCATCGGTGTTGAGAACGCGTTCGATGAAGGTGTCACC CTCGAGGAAACCGCTCTCAGTCAGGCCGAGGCTGAGACCTTGTTCGATCC CCCGTGGGCGTGCACGGTGCATGCCGTTCAGGGCCGTACGGTGGAAGTGA GATTGGTCATCCACCAAGCTCGACACCGGTTTTCCGACTTGCACTGGCTG TGCACAGCGGTTAGCCGAGCGACAGGCCCCTCGAATGTCAGAGTTGTCGA TGACATGCACCGAAGCGTTTGCGACATGAACGGAGAGGAGAGGAGAGGAG ATCGTGGGCTACTAGGAAGGTACCAGCTATCTCTACGCCGACGAGACGGC CGGGCAATTGGAACCTGGGGAACGGGAGCAACACAGGGTGGCTTTGATCA AGCAGCTCCTCAACTCTTACCGTGGTAGATGCAGCTTATGCTCGAGTGAG CTGGTCTGGGCGGTGTACAGCGAGCGACAGCTAACACTTGATCGCCTCGA CTGCTCCCTGGCTCATACGACGGGAAACATTGACGTCAAGTGCTTCAAGT GCAATCGCGCCCATGGTGGATTGGGAAGGCGGCGTGCGAAGAACAAGGTG GATACACAGGATGAGAGGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig8676:136..3356+

>mRNA_H-paniculata_contig8676.16616.1 ID=mRNA_H-paniculata_contig8676.16616.1|Name=mRNA_H-paniculata_contig8676.16616.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2208bp|location=Sequence derived from alignment at H-paniculata_contig8676:136..3356+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATCCTCGCGGCGGCACACAGCAATGGTGTCGACATCATTGGGACCTA
CGACACGCTCCAGCTTGAGCCCATTTGCAAGAGCAGCGGCATGTCCATTA
GCAGGGACGAAGTCGACCGGAAGGCCGTCCTCGAGCGAGCGTTTTCCACG
TGCTTTCATGTGTTCGCCCGCGAGAGGGACAACATTATTGAAGAGCAGGT
AGAGATGGACGACGGTCTATTATACATTCTTGCTGCTGGTCATGACAATA
TGGAGGCGCAGACCAGAGCCCTGAAGAGATTTGACAGAGGGTGCCCGACA
CACAGCCCCGATGTTTTAGATTTCCACCTCGCTTACACAAGAGATTGCGC
TCGATTTCATGCCTTCCGGGGACTGTCGAGATGCATCGAGTCCGGGGATT
GGGACCCGCTGGGCCAAAAAGCGGCGATTGGTGCACGATACCGGGATCTG
GGGAAGTCCGGCAAGGTTCTCAAAAATCACGCCTACACCATCGTCCGTTC
CACAGGCGAGCTCATCGGTGTTGAGAACGCGTTCGATGAAGGTGTCACCC
TCGAGGAAACCGCTCTCAGTCAGGCCGAGGCTGAGACCTTGTTCGATCCC
CCGTGGGCGTGCACGGTGCATGCCGTTCAGGGCCGTACGGTGGAAGTGAG
ATTGGTCATCCACCAAGCTCGACACCGGTTTTCCGACTTGCACTGGCTGT
GCACAGCGGTTAGCCGAGCGACAGGCCCCTCGAATGTCAGAGTTGTCGAT
GACATGCACCGAAGCGTTTGCGACATGAACGGAGAGGAGAGGAGAGGAGA
TCATGATCCTCGCGGCGGCACACAGCAATGGTGTCGACATCATTGGGACC
TACGACACGCTCCAGCTTGAGCCCATTTGCAAGAGCAGCGGCATGTCCAT
TAGCAGGGACGAAGTCGACCGGAAGGCCGTCCTCGAGCGAGCGTTTTCCA
CGTGCTTTCATGTGTTCGCCCGCGAGAGGGACAACATTATTGAAGAGCAG
GTAGAGATGGACGACGGTCTATTATACATTCTTGCTGCTGGTCATGACAA
TATGGAGGCGCAGACCAGAGCCCTGAAGAGATTTGACAGAGGGTGCCCGA
CACACAGCCCCGATGTTTTAGATTTCCACCTCGCTTACACAAGAGATTGC
GCTCGATTTCATGCCTTCCGGGGACTGTCGAGATGCATCGAGTCCGGGGA
TTGGGACCCGCTGGGCCAAAAAGCGGCGATTGGTGCACGATACCGGGATC
TGGGGAAGTCCGGCAAGGTTCTCAAAAATCACGCCTACACCATCGTCCGT
TCCACAGGCGAGCTCATCGGTGTTGAGAACGCGTTCGATGAAGGTGTCAC
CCTCGAGGAAACCGCTCTCAGTCAGGCCGAGGCTGAGACCTTGTTCGATC
CCCCGTGGGCGTGCACGGTGCATGCCGTTCAGGGCCGTACGGTGGAAGTG
AGATTGGTCATCCACCAAGCTCGACACCGGTTTTCCGACTTGCACTGGCT
GTGCACAGCGGTTAGCCGAGCGACAGGCCCCTCGAATGTCAGAGTTGTCG
ATGACATGCACCGAAGCGTTTGCGACATGAACGGAGAGGAGAGGAGAGGA
GATCGTACCAGCTATCTCTACGCCGACGAGACGGCCGGGCAATTGGAACC
TGGGGAACGGGAGCAACACAGGGTGGCTTTGATCAAGCAGCTCCTCAACT
CTTACCGTGGTAGATGCAGCTTATGCTCGAGTGAGCTGGTCTGGGCGGTG
TACAGCGAGCGACAGCTAACACTTGATCGCCTCGACTGCTCCCTGGCTCA
TACGACGGGAAACATTGACGTCAAGTGCTTCAAGTGCAATCGCGCCCATG
GTGGATTGGGAAGGCGGCGTGCGAAGAACAAGGTGGATACACAGGATGAG
AGGTAGGTACCAGCTATCTCTACGCCGACGAGACGGCCGGGCAATTGGAA
CCTGGGGAACGGGAGCAACACAGGGTGGCTTTGATCAAGCAGCTCCTCAA
CTCTTACCGTGGTAGATGCAGCTTATGCTCGAGTGAGCTGGTCTGGGCGG
TGTACAGCGAGCGACAGCTAACACTTGATCGCCTCGACTGCTCCCTGGCT
CATACGACGGGAAACATTGACGTCAAGTGCTTCAAGTGCAATCGCGCCCA
TGGTGGATTGGGAAGGCGGCGTGCGAAGAACAAGGTGGATACACAGGATG
AGAGGTAG
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