mRNA_H-paniculata_contig8674.16615.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 213 bits (542), Expect = 8.330e-58 Identity = 133/322 (41.30%), Postives = 176/322 (54.66%), Query Frame = 3
Query: 1113 QVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDSTA*-----GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRWRSLVCPAKEAATREELAWSTRLESVRKDVECISDILKGRFRISKLPSLSFQGVRSG*QCGGLDMQ*VPLTACCIRSTK*SCTSRT**TGP---GGMASLARGFT*SAQLNFST----NGPPERVEVEDIFFHHGRRLVTYYTYR 2042
QVLA LQIL RGN F DI +S IS T S FH FCK FA +L+ E + PT E L M+ YD +GF G V ST G P + +YT KEG PT+A++ TVDHSGRVL + + GA ND++++R+DK + R Y YKL +DG + EKG +L+VD GYH+WR+L+ P+K R +L +S RLES RKDVEC ILKGRFRI+KL ++ F + V T C + + S +R + G A L ++S+ +G E VEVE F +LVT + YR
Sbjct: 83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKL-AIGFHKQEY--------IDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYR 395
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 213 bits (542), Expect = 7.680e-57 Identity = 133/323 (41.18%), Postives = 177/323 (54.80%), Query Frame = 3
Query: 1110 LQVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDSTA*-----GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRWRSLVCPAKEAATREELAWSTRLESVRKDVECISDILKGRFRISKLPSLSFQGVRSG*QCGGLDMQ*VPLTACCIRSTK*SCTSRT**TGP---GGMASLARGFT*SAQLNFST----NGPPERVEVEDIFFHHGRRLVTYYTYR 2042
L+VLA LQIL RGN F DI +S IS T S FH FCK FA +L+ E + PT E L M+ YD +GF G V ST G P + +YT KEG PT+A++ TVDHSGRVL + + GA ND++++R+DK + R Y YKL +DG + EKG +L+VD GYH+WR+L+ P+K R +L +S RLES RKDVEC ILKGRFRI+KL ++ F + V T C + + S +R + G A L ++S+ +G E VEVE F +LVT + YR
Sbjct: 173 LKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKL-AIGFHKQEY--------IDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYR 486
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 198 bits (503), Expect = 1.290e-51 Identity = 124/334 (37.13%), Postives = 177/334 (52.99%), Query Frame = 3
Query: 1110 LQVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDST-----A*GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRWRSLVCPAKEAATREELAWSTRLESVRKDVECISDILKGRFRISKLPSLSFQGVRSG*QCGGLDMQ*VPLTACCIRSTK*SCTSRT**TGP---GGMASLARGFT*SAQLNFSTNGPP------ERVEVEDIFFHHGRRLVTYYTYRVNNVGVAWL 2069
L+VLA LQIL RGN F DI +S IS TA + FH F + FA +++ E I PT + M YD +GF+G ST G P + YT KEG+PT+AY+ TVDH+ RVL + G+ ND+S++R+D + RE Y + + + DG KG +L+VD GYH+W +L+ P+K + +LA+S RLESVRKDVEC I+KGRFRI KL S+ + D+ V T C + + S +++ G A L + + L+ S+ G E VEVE F ++L+ + YR + +AWL
Sbjct: 157 LKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKL-SIPYHKQE--------DIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 177 bits (449), Expect = 8.120e-45 Identity = 103/242 (42.56%), Postives = 139/242 (57.44%), Query Frame = 3
Query: 1056 SVRPSASYDSVTPTVAAL-LQVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDST-----A*GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRWRSLVCPAKEAATREELAWSTRLESVRKDVECISDILKGRFRISK 1763
+V P+A+ D L L+VL LQ+L RGN F D+ QLSL+S TA+ +FH FC F+ L+H+ + P E L Y +G G V S + P S T+ + KEG+ TL YEA+ DHSGR+L K GA ND+++V+ D ++ RE EP+ S + L D +G G LIVD GYHR SL+CP KE A+ + WS R ES+RKD+EC+ LKGRFR+ K
Sbjct: 92 TVFPTATRDVAGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFK 333
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.940e-42 Identity = 92/228 (40.35%), Postives = 134/228 (58.77%), Query Frame = 3
Query: 1107 LLQVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEET--LAATMKPYDAVGFTG*VDSTA*GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRWRSLVCPAKEAATREELAWSTRLESVRKDVECISDILKGRFRISKLPSLSFQ 1784
+LQVLA L IL +GN F I Q+S +S T Q FH FC+ FA +++ E I P EE+ L MK YD +G P + YT K+ FPT+AY+ TVDH+ R + + + G+ ND+++V +D + R + Y + L ++DG KG + + D GYH+W+ L+ P+K + ++L +S RLESVRKDVEC ILKGRFRI KL ++++Q
Sbjct: 18 VLQVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKL-AMAYQ 232
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 171 bits (432), Expect = 2.940e-42 Identity = 98/231 (42.42%), Postives = 137/231 (59.31%), Query Frame = 3
Query: 1113 QVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEET--LAATMKPYDAVGFTG*VDSTA*GCI-----PVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRWRSLVCPAKEAATREELAWSTRLESVRKDVECISDILKGRFRISKLPSLSFQ 1784
+VLA L IL RGN F I LS +S T Q FH FC+ FA +++ E I P+EE L M Y+ +GF G + ST I P + YT KEG PT+ Y+ TV+H+GRVL + + G+ ND++++ D+ + R + Y + + KDG + KG +LIVD GYH+WR L+ P+K + +L +S RLESVRKDVEC ILK RFRI KL ++++Q
Sbjct: 127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKL-AMTYQ 356
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 168 bits (425), Expect = 1.790e-41 Identity = 100/253 (39.53%), Postives = 137/253 (54.15%), Query Frame = 3
Query: 1113 QVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEET--LAATMKPYDAVGFTG*VDST-----A*GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYR----------------------------SMAYKLRDKDGVEQMEKGVHLIVDEGYHRWRSLVCPAKEAATREELAWSTRLESVRKDVECISDILKGRFRISKL 1766
+VLA L IL RGN F I Q+S +S T Q FH FC+ FA +++ E I PTEE+ L MK YD +GFTG V S A P + YT KEGFPT+AY+ TVDH+GR + + + G+ ND+++V +D ++ + Y + + ++DG KG +L+VD GYH+W+ L+ P+K + +L +S RLESVRKDVEC ILKGRFRI KL
Sbjct: 85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKL 337
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.800e-41 Identity = 92/217 (42.40%), Postives = 123/217 (56.68%), Query Frame = 3
Query: 1131 QILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDST-----A*GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRWRSLVCPAKEAATREELAWSTRLESVRKDVECISDILKGRFRISKL 1766
Q+L +GN FDD+ QLS +S+S AQ FH FC+ FA ++F E I PT L M + +G+TG ST P + +T KEGFPT+AY+ TVDH GR L + GA ND++++R+D + R Y YKLR +G ++M +G LIVD GYH W +L+ P+K E+ A+S LESVRKDV C FRI KL
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGC--------FRILKL 250
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 165 bits (418), Expect = 1.740e-40 Identity = 98/226 (43.36%), Postives = 134/226 (59.29%), Query Frame = 3
Query: 1128 LQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDSTA*GCI-----PVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRWRSLVCPAKEAATREELAWSTRLESVRKDVECISDILKGRFRISKLPSLSFQGV 1790
L++L RGN FDDI QLS ISE T Q FH F +RFA + F + +K P L ++ Y VGF G S I P S Y KEGF T+A+E DH R LG+ K GAMND+++V FD+ ++ + + + + L +DG E E+G++LIVD GYH+ CP + T++ELA+ +LESVRKD+EC ILKGRFRI K+P L ++G+
Sbjct: 137 LKVLGRGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILREYKDVGFGGCAGSMDCTHIHYQSAPNSGRHSYVGKEGFATVAFEVVCDHKLRCLGVSKAFPGAMNDKTIVMFDEYVRRIKT--ECKDVPFTLLGEDGSEFEERGLYLIVDGGYHK-----CPVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLL-YRGI 354
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 164 bits (414), Expect = 1.900e-40 Identity = 92/230 (40.00%), Postives = 132/230 (57.39%), Query Frame = 3
Query: 1113 QVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEET--LAATMKPYDAVGFTG*VDSTA*GCIPVSHTDL----------YTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRWRSLVCPAKEAATREELAWSTRLESVRKDVECISDILKGRFRISKL 1766
+VLA L IL RGN F I Q+S +S T Q+ FH FCK FA +++ E I P+E+ L MK YD +GF+G A G + V+H YT KEG PT+ Y+ TV+H+GR + + + + ND++ V +D ++ R Y + + ++DG KG +L+VD GYH+W+ L+ P K + ++ +S RLESVRKDVEC ILKG FRI K+
Sbjct: 98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSG-----AMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKV 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8674.16615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8674.16615.1 >prot_H-paniculata_contig8674.16615.1 ID=prot_H-paniculata_contig8674.16615.1|Name=mRNA_H-paniculata_contig8674.16615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp MKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHback to top mRNA from alignment at H-paniculata_contig8674:2811..5968+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8674.16615.1 ID=mRNA_H-paniculata_contig8674.16615.1|Name=mRNA_H-paniculata_contig8674.16615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3158bp|location=Sequence derived from alignment at H-paniculata_contig8674:2811..5968+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8674:2811..5968+ >mRNA_H-paniculata_contig8674.16615.1 ID=mRNA_H-paniculata_contig8674.16615.1|Name=mRNA_H-paniculata_contig8674.16615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=702bp|location=Sequence derived from alignment at H-paniculata_contig8674:2811..5968+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |