mRNA_H-paniculata_contig8674.16614.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 240 bits (613), Expect = 5.010e-70 Identity = 144/341 (42.23%), Postives = 193/341 (56.60%), Query Frame = 2
Query: 68 VGVARI*I*ITGGAYRTRQTSGKMSALRQDAVEV--AVCTTAAATMLLQLNDTLACAYLVL*QSARDDSDAEDEGD-GRHPKKQRRVYVRSPYSESAWGRMLQFL---DLTDPNSRDARRFRRRFGIPYPFVVELMKVVQEGQWFPKREGHVDVAGRRMVPLELKVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDSTA*-----GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHR 1057
+GVAR+ + A R +A ++V A TTA AT LQ + V+ + DD + + E D K+RRVYVR Y++S W + L L TD +R+ARRFR F +PYPF V L+++V++ WFP G DV GR+ VP+ELKVLA LQIL RGN F DI +S IS T S FH FCK FA +L+ E + PT E L M+ YD +GF G V ST G P + +YT KEG PT+A++ TVDHSGRVL + + GA ND++++R+DK + R Y YKL +DG + EKG +L+VD GYH+
Sbjct: 12 LGVARLGCALVLPAGRVVHRQMAETATESGGIDVPAAFATTAVATASLQQLQRSVAVWDVIMEDFEDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPT--GESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK 350
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 218 bits (555), Expect = 1.110e-61 Identity = 132/321 (41.12%), Postives = 176/321 (54.83%), Query Frame = 2
Query: 131 GKMSALRQDAVEV-AVCTTAAATMLLQLNDTLACAYLVL*QSARDDSDAEDEGDGRHPKKQRRVYVRSPYSESAWGRMLQFLD------LTDPNSRDARRFRRRFGIPYPFVVELMKVVQEGQWFPKREGHVDVAGRRMVPLELKVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDST-----A*GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHR 1057
G MS+ AV V A + A A Q TL LVL D D+E+E + K+RRVY R Y+ S W LQ L + DP SR ARRFR F +PYPF VEL+ +V++ WFP G D +GRR +P++LKVLA LQIL RGN F DI +S IS TA + FH F + FA +++ E I PT + M YD +GF+G ST G P + YT KEG+PT+AY+ TVDH+ RVL + G+ ND+S++R+D + RE Y + + + DG KG +L+VD GYH+
Sbjct: 16 GTMSSSETGAVNVPAAFSVALAAFNQQQQRTLVAWDLVLDDLDELDPDSEEEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPT--GKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHK 334
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 197 bits (500), Expect = 7.400e-55 Identity = 120/302 (39.74%), Postives = 165/302 (54.64%), Query Frame = 2
Query: 260 DDSDAEDEGDGRHPKKQRRVYVRSPYSESAWGRMLQFLDLTDPNSRDARRFRRRFGIPYPFVVELMKVVQEGQWFPKREGHVDVAGRRMVPLELKVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDST-----A*GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRVSQVLLFDGHCCWTTVQKCVL*FY-IIRRQF 1147
+DS+ E+E G K+ RRV R + SAW LQ +DL D + A+ FR RF +PYPF EL+K+ + +WF G D A R +PLELKVL +GN FDD+ QLS +SES AQ+ FH FC+ A ++F E I PT L M + +G TG ST P + +T KEGFPT+AYE TVDH+GR L + AG ND++ +R+D + R Y YKLR +G E+ +G LIVD GY+ ++ F H +V+K V F+ I++ +F
Sbjct: 46 EDSEDEEEVVGPKVKRTRRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSP--GEKDAANREGIPLELKVLG------KGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYESNEDTAFSRHL--ESVRKDVECFFGILKGRF 337
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 191 bits (484), Expect = 1.200e-51 Identity = 106/266 (39.85%), Postives = 153/266 (57.52%), Query Frame = 2
Query: 299 PKKQRRVYVRSPYSESAWGRMLQFLDLT-DPNSRDARRFRRRFGIPYPFVVELMKVVQEGQWFPKREGHVDVAGR---RMVPLELKVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDSTA*GCI-----PVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRVSQV 1069
PK++R V R+ Y W RML+ DL DP++R+A++FRRRF +PYPF + L+ V+ G W ++ GR R +P+E KVLA L+IL RGN FDD+ +++ + E+T FH F +RFA ++F ++ P E+ L MK YD VG +G + S I P S + KEG+ TL + V H RVL + GA ND+++++FDK A R G Y+ + Y L+ +DG + EKG LIVD GYH Q+
Sbjct: 49 PKRRRTVRPRADYRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFACEIFPVWVRMPNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAVSHDMRVLSCTRGFPGAQNDKTIIKFDKFAMAVRNGW-YKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQL 313
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 176 bits (445), Expect = 5.150e-46 Identity = 98/247 (39.68%), Postives = 141/247 (57.09%), Query Frame = 2
Query: 338 SESAWGRMLQFLDLTDPNSRDARRFRRRFGIPYPFVVELMKVVQEGQWFPKREGHVDVAGRRMVPLELKVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEET--LAATMKPYDAVGFTG*VDSTA*GCI-----PVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHR 1057
S AW ++L+ DL DP S A++FR F +PYPF + L+++V++ WF + D GRR P+E KVLA L IL RGN F I LS +S T Q FH FC+ FA +++ E I P+EE L M Y+ +GF G + ST I P + YT KEG PT+ Y+ TV+H+GRVL + + G+ ND++++ D+ + R + Y + + KDG + KG +LIVD GYH+
Sbjct: 61 STCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQR--DAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHK 305
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 174 bits (442), Expect = 1.100e-45 Identity = 107/262 (40.84%), Postives = 145/262 (55.34%), Query Frame = 2
Query: 302 KKQRRVYVRSPYSESAWGRMLQFLD--LTDPNSRDARRFRRRFGIPYPFVVELMKVVQEGQWFPKREGHVDVAGRRM---VPLELKVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDSTA*GCI-----PVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHR 1057
K++R VY R Y SAW ML+ + L DP ++DAR FRRRF +PYP +EL+K ++ W D+ GR +P+ELKVL RGN FDDI QLS ISE T Q FH F +RFA + F + +K P L ++ Y VGF G S I P S Y KEGF T+A+E DH R LG+ K GAMND+++V FD+ ++ + + + + L +DG E E+G++LIVD GYH+
Sbjct: 53 KRKRTVYPRPDYHNSAWAIMLREKEDALADPTTKDARLFRRRFRMPYPIFLELVKEIKSAGWKGFTTDATDLGGRGTRPCIPVELKVLG------RGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILREYKDVGFGGCAGSMDCTHIHYQSAPNSGRHSYVGKEGFATVAFEVVCDHKLRCLGVSKAFPGAMNDKTIVMFDEYVRRIKT--ECKDVPFTLLGEDGSEFEERGLYLIVDGGYHK 306
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Match: A0A6H5KLF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF8_9PHAE) HSP 1 Score: 172 bits (437), Expect = 3.040e-45 Identity = 106/280 (37.86%), Postives = 152/280 (54.29%), Query Frame = 2
Query: 257 RDDSDAEDEGDGRHPKKQRRVYVRSPYSESAWGRMLQFLDLT-DPNSRDARRFRRRFGIPYPFVVELMKVVQEGQWFPKREGHVDVAGR---RMVPLELKVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDSTA*GCI-----PVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRVSQV 1069
R++ D DE PK +R V R+ W RML+ DL DP++R+A++FRRRF +PYPF + L+ V+ G+W ++ GR R +P+E+ VL +IL RGN FDD+ +++ + E+T FH F RFA + F ++ P E+ L MK YD VG TG + S + P S + KEG+ TL Y V H RVL + GA ND+++V+FDK R G Y+ + Y L+ +DG + EKG LIV GYH Q+
Sbjct: 3 REEEDGCDEEP--RPKCRRTVRPRADDRALPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDGVKAGKWPGFTTNEFELGGRGTRRCIPVEIDVL---RILGRGNYFDDVSEVTGMGEATVNQLFHKFTGRFAREFFPVWVRMPNEDELKEIMKTYDEVGMTGAMGSMDGTHLQWTVCPYSERSSHVGKEGYATLVYNVAVSHDMRVLSCTRGFPGAQNDKTIVKFDKFATEVRNGW-YKDVEYTLKGEDGGDIKEKGPWLIVGGGYHNWKQL 276
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 172 bits (437), Expect = 3.860e-45 Identity = 109/268 (40.67%), Postives = 146/268 (54.48%), Query Frame = 2
Query: 311 RRVYVRSPYSESAWGRMLQFLDLTD------PNSRDARRFRRRFGIPYPFV---VELMKVVQEGQWFPKREGHVDVAGRRMVPLELKVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDST-----A*GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRVSQVL 1072
R R YS SAWG L L+ P+SR+A+ FR F +P+ F V+L++ V FP DVAGR+ VPLELKVL LQ+L RGN F D+ QLSL+S TA+ +FH FC F+ L+H+ + P E L Y +G G V S + P S T+ + KEG+ TL YEA+ DHSGR+L K GA ND+++V+ D ++ RE EP+ S + L D +G G LIVD GYHRV ++
Sbjct: 33 RETRERPDYSSSAWGVRLANLESLRIAGRLVPSSREAKAFRSDFRVPHEFFRHFVDLVRTV-----FPTATR--DVAGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLI 293
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 156 bits (395), Expect = 2.560e-39 Identity = 83/181 (45.86%), Postives = 108/181 (59.67%), Query Frame = 2
Query: 530 PLELKVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDSTA*-----GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHR 1057
P +VLA LQIL RGN F DI +S IS T S FH FCK FA +L+ E + PT E L M+ YD +GF G V ST G P + +YT KEG PT+A++ TVDHSGRVL + + GA ND++++R+DK + R Y YKL +DG + EKG +L+VD GYH+
Sbjct: 79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK 259
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 155 bits (393), Expect = 1.160e-38 Identity = 90/235 (38.30%), Postives = 123/235 (52.34%), Query Frame = 2
Query: 392 SRDARRFRRRFGIPYPFVVELMKVVQEGQWFP----KREGHVDVAGRRMVPLELKVLASLQILERGNSFDDIGQLSLISESTAQSAFHTFCKRFA*DLFHELIKPPTEETLAATMKPYDAVGFTG*VDST-----A*GCIPVSHTDLYTDKEGFPTLAYEATVDHSGRVLGIMKEMAGAMNDRSMVRFDKTLQAAREGEPYRSMAYKLRDKDGVEQMEKGVHLIVDEGYHRVSQV 1069
+R + R+ R++ P E + + WF + GH+ K+L +LQIL RGN FDDI QLSL+S+ A + FH FCK FA +LF E I PT M YD +G TG + ST G P + YT KEGFPT+AY+ TVDH+GR + I GA ND++++R+D + + Y YKLR DG + KG + IVD GYH V+ +
Sbjct: 200 TRTSHRWHRKYCCRRPTAREKRRTL----WFRLHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHEVNSL 430 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8674.16614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8674.16614.1 >prot_H-paniculata_contig8674.16614.1 ID=prot_H-paniculata_contig8674.16614.1|Name=mRNA_H-paniculata_contig8674.16614.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp MLQFLDLTDPNSRDARRFRRRFGIPYPFVVELMKVVQEGQWFPKREGHVDback to top mRNA from alignment at H-paniculata_contig8674:2116..4837+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8674.16614.1 ID=mRNA_H-paniculata_contig8674.16614.1|Name=mRNA_H-paniculata_contig8674.16614.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2722bp|location=Sequence derived from alignment at H-paniculata_contig8674:2116..4837+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8674:2116..4837+ >mRNA_H-paniculata_contig8674.16614.1 ID=mRNA_H-paniculata_contig8674.16614.1|Name=mRNA_H-paniculata_contig8674.16614.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at H-paniculata_contig8674:2116..4837+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |