mRNA_H-paniculata_contig865.16607.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 183 bits (464), Expect = 3.880e-51 Identity = 102/206 (49.51%), Postives = 131/206 (63.59%), Query Frame = 1
Query: 40 ITTNDWTSCANNSYVSFTLSYIDGAWNLVTLVLSFSNKFGQTTGEYLARSIEVFVNDHGPKGRVVAGTTDCEPSMVKAGRTL-ADSGVFKHVRCTNHRLENTTGIVFYGPGVKKCMALARALITRYTKSSQAADRLVECCVILHITP*KVVQDVEIRRWSTQALIAGAVYLMKAVELIEKMHKIAPLLSSMDWCLLKLLLSVLDPF 654
ITT+ WTS N SY+S T++YID W L L L + G TTGE LA + V H GRV+A TDCEPSM+KAGR L D H+ C+NHR+E+TT VF G + + LAR L+ RY KSSQ A RLV+ C IL + P V+QDVE R WST A++ +YLMKA++L E M ++ PLLS DW +L+L+ +L PF
Sbjct: 43 ITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPF 247
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 175 bits (443), Expect = 3.220e-48 Identity = 100/206 (48.54%), Postives = 132/206 (64.08%), Query Frame = 1
Query: 40 ITTNDWTSCANNSYVSFTLSYIDGAWNLVTLVLSFSNKFGQTTGEYLARSIEVFVNDHGPKGRVVAGTTDCEPSMVKAGRTLADSGV-FKHVRCTNHRLENTTGIVFYGPGVKKCMALARALITRYTKSSQAADRLVECCVILHITP*KVVQDVEIRRWSTQALIAGAVYLMKAVELIEKMHKIAPLLSSMDWCLLKLLLSVLDPF 654
ITT+ WTS +N SY+S T++YID W L L L+ + G T GE LAR I + HG GRV A TDCEPSMVKAGR L G +H+ C+NHR+E+TT VF G + +A ARA++ RY +SSQ + RL IL ++P V+QDVE R WS+ A+I +YLMKA++L E IAP+LS DW +L+L+ +L PF
Sbjct: 79 ITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPF 283
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.050e-44 Identity = 90/208 (43.27%), Postives = 129/208 (62.02%), Query Frame = 1
Query: 31 HPSITTNDWTSCANNSYVSFTLSYIDGAWNLVTLVLSFSNKFGQTTGEYLARSIEVFVNDHGPKGRVVAGTTDCEPSMVKAGRTLADSGVFKHVRCTNHRLENTTGIVFYGPGVKKCMALARALITRYTKSSQAADRLVECCVILHITP*KVVQDVEIRRWSTQALIAGAVYLMKAVELIEKMHKIAPLLSSMDWCLLKLLLSVLDPF 654
H ++T++ WTS +N++Y+ FT +YI ++LV L + G+TTGE L +++ + +G R VA TTDCEPSMVKAGR L ++ H+ C HRLE+ T F GPGV K +ALAR ++TRY SSQA+DRL + I+ + KVVQDVE R WST A I + L + + E++ I PLL DW +L+++ + PF
Sbjct: 49 HVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPF 256
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 163 bits (413), Expect = 8.820e-43 Identity = 91/208 (43.75%), Postives = 127/208 (61.06%), Query Frame = 1
Query: 31 HPSITTNDWTSCANNSYVSFTLSYIDGAWNLVTLVLSFSNKFGQTTGEYLARSIEVFVNDHGPKGRVVAGTTDCEPSMVKAGRTLADSGVFKHVRCTNHRLENTTGIVFYGPGVKKCMALARALITRYTKSSQAADRLVECCVILHITP*KVVQDVEIRRWSTQALIAGAVYLMKAVELIEKMHKIAPLLSSMDWCLLKLLLSVLDPF 654
H ++T++ WT +N++Y+SFT +YI ++LV L L +T GE L +++ + +G GR VA TTDCE SMVKAGR L ++ H+ C HRLE+ T F GPGV K +ALAR ++TRYT SSQA+DRL + C I+ + VVQDVE R WST I + L + + E + PLL DW +L+L+ S+L PF
Sbjct: 5 HVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPF 212
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 151 bits (382), Expect = 1.550e-40 Identity = 84/198 (42.42%), Postives = 118/198 (59.60%), Query Frame = 1
Query: 61 SCANNSYVSFTLSYIDGAWNLVTLVLSFSNKFGQTTGEYLARSIEVFVNDHGPKGRVVAGTTDCEPSMVKAGRTLADSGVFKHVRCTNHRLENTTGIVFYGPGVKKCMALARALITRYTKSSQAADRLVECCVILHITP*KVVQDVEIRRWSTQALIAGAVYLMKAVELIEKMHKIAPLLSSMDWCLLKLLLSVLDPF 654
S +N++Y++FT +YI ++LV L L + G+TTGE L +++ + +G GR VA TTDCEP MVKAGR L ++ H+ C HR E+ T F GPGV K +AL R ++TRYT SSQA++RL + C I+ + KVVQDVE R WST ++ I PLL+ DW +L+L+ +L PF
Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPF 184
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 147 bits (372), Expect = 2.550e-37 Identity = 83/155 (53.55%), Postives = 103/155 (66.45%), Query Frame = 1
Query: 40 ITTNDWTSCANNSYVSFTLSYIDGAWNLVTLVLSFSNKFGQTTGEYLARSIEVFVNDHGPKGRVVAGTTDCEPSMVKAGRTLA-DSGVFKHVRCTNHRLENTTGIVFYGPGVKKCMALARALITRYTKSSQAADRLVECC-VILHITP*KVVQDV 498
IT++ WTSCAN++Y+S T + I AW LVTL + S G TTG+ LA I+ V HG G+V A TTDCEPSMVK GR LA D+ V + C N+RLE+T+ IVF GP VKK M LAR L+TRY SSQAADRL + L + +V+QDV
Sbjct: 43 ITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV 197
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Match: UPI001C1A98B4 (Hypothetical protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1A98B4) HSP 1 Score: 65.5 bits (158), Expect = 6.930e-9 Identity = 68/228 (29.82%), Postives = 108/228 (47.37%), Query Frame = 1
Query: 13 KIKSKHHPSITTNDWTSCANNSYVSFTLSYIDGAWNLVTLVLSFSNKFGQTTGEYLARSIEVFVNDHGPKGRVVAGTTDCEPSMVKAGRT----LADSG---VFKHVRCTNHRLENTT--GIVFYGPGVKKCMALARALITRYTKSSQAADRLVECCVILHITP*KVVQ-DVEIRRWSTQALIAGAVYLMKAVELIEKMHKIAPLLSSM-----DWCLLKLLLSVLDP 651
K+ SK +ITT+ WT+C N +Y+S TL +ID W + ++L + + + TG LA ++ +ND G +++A TTD +M G+ L+D+ + + VRC H L G+ G + K A A+ +SSQ ++ L P V + DV R ST +I L K EL + + PLL + DW L L+++L+P
Sbjct: 167 KLSSK--VTITTDVWTACTNQAYMSVTLHWIDDEWKMYCILLDLVSLYERHTGVTLANTMYTIINDFGLGEKIIAITTDNASNMNVFGQNFTQLLSDNHGNVLSRRVRCAAHILNLVVRDGLDAVGKSIIKAQKFAIAI-----RSSQVLFEELKKIFELKQRPFLVPEIDVSTRWNSTYIMIEK---LRKICELTDILVASNPLLKDISPNDEDWKELDSLVTLLEP 384
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Match: UPI00096AF313 (zinc finger BED domain-containing protein 1-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096AF313) HSP 1 Score: 65.5 bits (158), Expect = 8.260e-9 Identity = 48/165 (29.09%), Postives = 79/165 (47.88%), Query Frame = 1
Query: 43 TTNDWTSCANNSYVSFTLSYIDGAWNLVTLVLSFSNKFGQTTGEYLARSIEVFVNDHG--PKGRVVAGTTDCEPSMVKAGRTLADSGVFKHVRCTNHRLENTTGIVFYGPGVKKCMALARALITRYTKSSQAADRLVECCVILHITP*KVVQDVEIRRWSTQALI 531
T++ WTSCAN++Y+S T +ID W LV+ VL S G TG ++ ++ + G ++VA D +MV +G L + V C HRL+ + + + A+ L+T + S+ A+D L + + + K+ QD R ST +I
Sbjct: 190 TSDIWTSCANDAYISLTAHFIDSDWQLVSCVLGSSPFPGHHTGSHIYEKLKDITHAFGFQQHSQLVALVHDAASNMVLSGEILEERLECASVCCAAHRLQLCIEDGLSVSAISRAVGAAKKLVTHFRHSALASDALKKKQLDMGKPVMKLQQDCPTRWNSTFYMI 354
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Match: A0A1X7UW18_AMPQE (BED-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UW18_AMPQE) HSP 1 Score: 65.5 bits (158), Expect = 8.720e-9 Identity = 48/165 (29.09%), Postives = 79/165 (47.88%), Query Frame = 1
Query: 43 TTNDWTSCANNSYVSFTLSYIDGAWNLVTLVLSFSNKFGQTTGEYLARSIEVFVNDHG--PKGRVVAGTTDCEPSMVKAGRTLADSGVFKHVRCTNHRLENTTGIVFYGPGVKKCMALARALITRYTKSSQAADRLVECCVILHITP*KVVQDVEIRRWSTQALI 531
T++ WTSCAN++Y+S T +ID W LV+ VL S G TG ++ ++ + G ++VA D +MV +G L + V C HRL+ + + + A+ L+T + S+ A+D L + + + K+ QD R ST +I
Sbjct: 187 TSDIWTSCANDAYISLTAHFIDSDWQLVSCVLGSSPFPGHHTGSHIYEKLKDITHAFGFQQHSQLVALVHDAASNMVLSGEILEERLECASVCCAAHRLQLCIEDGLSVSAISRAVGAAKKLVTHFRHSALASDALKKKQLDMGKPVMKLQQDCPTRWNSTFYMI 351
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Match: A0A8J2MNH3_COTCN (Similar to ZBED1: E3 SUMO-protein ligase ZBED1 (Homo sapiens) n=1 Tax=Cotesia congregata TaxID=51543 RepID=A0A8J2MNH3_COTCN) HSP 1 Score: 62.4 bits (150), Expect = 8.740e-8 Identity = 63/221 (28.51%), Postives = 94/221 (42.53%), Query Frame = 1
Query: 37 SITTNDWTSCANNSYVSFTLSYIDGAWNLVTLVLS----FSNKFGQTTGEYLARSIEVFVNDHGPKGRVVAGTTDCEPSMVKAGRTL--ADSGVFKHVRCTNHRLENTTGIVFYGPGVKKCMALARALITRYTKSSQAADRLVECCVILHITP*KVVQDVEIRRW-STQALIAGAVYLMKAVELI--------EKMHKIAPLLSSMDWCLLKLLLSVLDPF 654
SITT+ W+S ANNS+V+ T+ ID WNL + L + T +LA+++ ND +V+A D MV R AD + VRC H L+ +K C+ A++ + K S A +E H P + RW S ++ V KAVE + +KM K LL+ DW L+ ++ + PF
Sbjct: 113 SITTDGWSSRANNSFVTITVHGIDDQWNLSSFTLDTLEMLESHNATNTYNHLAKTL----NDWNLYDKVIAVVHDNARYMVATVRDNWEADDDIEISVRCFCHTLQCAVETALKECNLKDCLQRVSAIVGHFNKHSNKASTALENAQKKHHLPTHRLISHSPTRWNSAYDMVERLVEQRKAVECVLLDKEITTKKMMK-KLLLNESDWTYLRDVIKIFKPF 328 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig865.16607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig865.16607.1 >prot_H-paniculata_contig865.16607.1 ID=prot_H-paniculata_contig865.16607.1|Name=mRNA_H-paniculata_contig865.16607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp MVKAGRTLADSGVFKHVRCTNHRLENTTGIVFYGPGVKKCMALARALITRback to top mRNA from alignment at H-paniculata_contig865:30517..31170- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig865.16607.1 ID=mRNA_H-paniculata_contig865.16607.1|Name=mRNA_H-paniculata_contig865.16607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=654bp|location=Sequence derived from alignment at H-paniculata_contig865:30517..31170- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig865:30517..31170- >mRNA_H-paniculata_contig865.16607.1 ID=mRNA_H-paniculata_contig865.16607.1|Name=mRNA_H-paniculata_contig865.16607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=438bp|location=Sequence derived from alignment at H-paniculata_contig865:30517..31170- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |