mRNA_H-paniculata_contig8646.16605.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Match: D7FKI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKI0_ECTSI) HSP 1 Score: 551 bits (1421), Expect = 7.690e-191 Identity = 292/441 (66.21%), Postives = 335/441 (75.96%), Query Frame = 1
Query: 1 TTEDPRRSLAVTTPTESPSLYPAGGTYYHPVAVSLVSNSGALIFYTTDGTEPSESSDVVSSGELIVIEESGTLRATAAPTRSTFSAFSSEEVQATFVVYSEGKCGYAYFVPDFTRTGYSGKVVEVDLQTAELGKVRLHSVVTDFADFYSDLGVGPYDDQVAVQDLAADGDSSLVGYWGGFSGEVDGSALGFLSPLFNGEDFHGNALQ--LGNFGNDNVTRFC-ELDSTLESTSTCLFTVLNLAEVDDDLRGFSGGFLDSGKAYFVPSRNGRGRYAKLVRVDAGTFSADSVEVLDLLKVDSEVGGFFGGFASDGYGYLVPSRSFKGLVGGINTNLSADGIAGSHLL-------ENEVRVAGHLESSYSGKLVRVNLTDFSVTGVEVLDLTKVDPDLRGFTGGFAAGHWGFLVPFKNKEVDDEYSGKMVRFDRRTFDLASVTV 1293
TT RR+LA T E P+ +P GGTY+ P+AVSLVS+ A+++YTTDGT P +S V+S ELIV+EES T+RA AA F A SS EV+A+FVVY GKCG+AYFVP FT +GYSG VVEV+LQT LG VRLH VVTDFADFYSD GVGPY QV DL A+GDS L GYWGGFSG+VDG GFLSPLF+GEDFHG A+Q L FG N TRFC + LES +TC + V++L +VD DLRGFSGGFL + KAYFVPS NGRG AK VRVDA FS++SVEVLDL VD EVGGFFGGFA +GYGYLVP RSF+G VGG+NTNLSADG A S + AG L+ +YSGKLVRV+L+DFS +GV+VLDLT+VDPDLRGFTGGFAAGHWGFLVPFKNKE D E+SGKMVRFD RTFD ASVTV
Sbjct: 138 TTVISRRALAGTEQAEDPTFFPDGGTYHEPIAVSLVSDDSAVVYYTTDGTVPDGTSTFVTSSELIVLEESVTIRAIAAFQGEDFDARSSAEVEASFVVYVAGKCGHAYFVPHFTSSGYSGNVVEVELQTDRLGSVRLHGVVTDFADFYSDGGVGPYTGQVISSDLTAEGDSGLAGYWGGFSGDVDGEMFGFLSPLFDGEDFHGKAVQIRLDGFGGTNTTRFCGSSEGVLESNATCTYNVVDLEDVDPDLRGFSGGFLHASKAYFVPSYNGRGAGAKFVRVDASNFSSNSVEVLDLHTVDPEVGGFFGGFAWEGYGYLVPCRSFQGPVGGVNTNLSADGFAWSSSFLGSDSTGRGSGQKAGRLQPAYSGKLVRVDLSDFSSSGVQVLDLTEVDPDLRGFTGGFAAGHWGFLVPFKNKEADGEFSGKMVRFDLRTFDHASVTV 578
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Match: A0A6V1PSV2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PSV2_HETAK) HSP 1 Score: 170 bits (430), Expect = 5.220e-45 Identity = 96/201 (47.76%), Postives = 127/201 (63.18%), Query Frame = 1
Query: 694 CLFTVLNLAEVDDDLRGFSGGFLDSGKAYFVPSRNGRGR---YAKLVRVDAGTFSADSVEVLDLLKVDSEVGGFFGGFASDGYGYLVPSRSFKGLVGGINTNLSADGI--AGSHLLENEVRVAGHLESSYSGKLVRVNLTDFSVTGVEVLDLTKVDPDLRGFTGGFAAGHWGFLVPFKNKE-VDDEYSGKMVRFDRRTFDL 1278
C VL+L EV LRGF+GGF G Y VP+ +GR A L RV AG F+A VE L+L + D+ VGG++GG GYLVP R+ G +GGI++ +ADG A +HL E GHLE+ YSG ++R+NLT FSV VE LDL + PDLRGF GGF G +G+LVP+KN+E ++ + G +V+ D TF+L
Sbjct: 9 CTIAVLDLTEVHAYLRGFAGGFAHGGFVYLVPAADGRESSTPVAHLARVRAGQFNASGVEWLELSEYDTHVGGYYGGLVYGDSGYLVPHRTNIGPIGGIHSRYTADGYKPAPAHLPRLEAG-GGHLEAEYSGAVLRLNLTAFSVDAVEHLDLADLHPDLRGFAGGFVVGKYGYLVPYKNQERLEGGHHGNLVKLDLETFEL 208
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Match: A0A7S4E8S4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8S4_9STRA) HSP 1 Score: 133 bits (334), Expect = 8.970e-30 Identity = 92/264 (34.85%), Postives = 128/264 (48.48%), Query Frame = 1
Query: 637 NDNVTRFCELDSTLESTSTCLFT-VLNLAEVDDDLRGFSGGFLDSGKAYFVPSRNGRGRYAKLVRVDAGTFSADSVEVLDLLKVDSEVGGFFGGF------ASDGYGYLVPSRSFKGLVGGINTNLSAD----GIAGSHLLE------------------------NEVRVAG---------HLESSYSGKLVRVNLTDFSVTG---VEVLDLTKVDPDLRGFTGGFAAGHWGFLVPFKNKEVDDEYSGKMVRFDRRTFDLASV 1287
N+ T E+ T+ + T L+L D LRGF GGF YFVP +GR + R++A FS +V+ LDL + D+ + G+FGGF A YG+LVP + G VG +N+ AD G+ L+ +E R G H + GKLVR++L DF TG +VLDLT++DPDLRGF GG G +G LVP+KN+ DD + GK+V+ D F + +V
Sbjct: 606 NNTATTATEVPKTISIPAAPSRTEALDLTATHDRLRGFVGGFAMRDHVYFVPHFDGRNPGHVIARLEAEDFSQATVKALDLWRWDTSLAGYFGGFGYTTHGAGIEYGFLVPHAALTGPVGKVNSQHPADTWAPGVGQDWNLDYSDGRDTSTRLGERHWYEEGGSFHSEYRTEGSQRTAVGGDHTTEYFHGKLVRLHLADFESTGDAPFDVLDLTEIDPDLRGFAGGSVVGRYGLLVPYKNRVGDDGFFGKLVKVDLEAFTVEAV 869
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Match: A0A7S2RTQ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTQ0_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.590e-28 Identity = 75/178 (42.13%), Postives = 102/178 (57.30%), Query Frame = 1
Query: 781 FVPSRNGRGRYAKLVRVDAGTFSADSVEVLDLLKVDSEVGGFFGGFASDG-----YGYLVPSRSFKGLVGGINTNLSADGIAGSHLLENEVRVAGHLESSYSGKLVRVNLTDFSVTGVEVLDLTKVDPDLRGFTGGFAAGHWGFLVPFKNKEVDDEYS-------------GKMVRFD 1260
FVP +G +++RV F+ +VEVLDL DS +GGF GG + +G+LVP R G +GG N+ SADG ++ R +GHL+S YS +LVR NLTDFS V+V DL KVDPDLRGF+ GF G +LVP++N +V ++ + GK+VR D
Sbjct: 1 FVPLFDGERAGGRVLRVPVDDFTETAVEVLDLSLADSSLGGFQGGASYTSTQGGHFGFLVPLRGSVGPLGGENSRNSADGFQRTN------RGSGHLQSHYSSRLVRFNLTDFSPASVKVYDLAKVDPDLRGFSDGFVVGSHLYLVPYRNCDVGEDMASFGQDVAPCTGAFGKLVRID 172
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Match: A0A7S2DPP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DPP0_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.380e-27 Identity = 65/148 (43.92%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 751 GGFLDSGKAYFVPSRNGRGRYAKLVRVDAGTFSADSVEVLDLLKVDSEVGGFFGGFA---------SDGYGYLVPSRSFKGLVGGINTNLSADGIAGSHLLENEVRVAG-HLESSYSGKLVRVNLTDFSVTGVEVLDLTKVDPDLRGF 1164
GGF+ Y VP +G K+ RV F AD V VLDL +V +++ GFFGGFA S YGYLVP RS +G + G+NT+ + DG ++ + G HL + Y G+LVR++L DF+ +GV VLDL+ DPDLRGF
Sbjct: 1 GGFVYGDYLYLVPFFDGHQYGHKVARVHMEHFDADHVHVLDLWEVSTDLAGFFGGFAYTTQSAGGDSKPYGYLVPHRSMEGPIDGVNTDFTVDGFTSEYVNRRRSSMGGDHLTAHYHGRLVRIDLDDFTASGVSVLDLSVYDPDLRGF 148
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Match: A0A6H5KG48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG48_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.150e-25 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 1
Query: 1102 FSVTGVEVLDLTKVDPDLRGFTGGFAAGHWGFLVPFKNKEVDDEYSGKMVRFDRRTFDLASVTV 1293
+ V V+VLDLT+VDPDLRGFTGGFAAGHWGFLVPFKNKE D E+SGKMVRFD RTFD A VTV
Sbjct: 6 YFVHAVKVLDLTEVDPDLRGFTGGFAAGHWGFLVPFKNKEADGEFSGKMVRFDLRTFDHAGVTV 69
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Match: D0N386_PHYIT (Apple domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N386_PHYIT) HSP 1 Score: 117 bits (293), Expect = 1.200e-24 Identity = 139/490 (28.37%), Postives = 207/490 (42.24%), Query Frame = 1
Query: 46 ESPSLYPAGGTYYHPVAVSLVSNS-GALIFY-----TTDGTEPSESSDVVSSGELIVIEESGTLRATAAPTRSTFSAFSSEEVQATFVVYSEG----KCGYAYFVPDFTRTGYSGKVVEVDLQTAELGKVRLHSV-VTDFADFYSDLGVGPYDDQVAVQDLAADGDSSLVGYWGGFSGEVDGSALG--FLSPLFNGEDFHGNALQ-------------LG-------------------NFGNDNVTRFCELDSTLESTSTCLFTVLNLAEVDDDLRGFSGGFLDSGKAYFVPSRNGRGRYAKLVRVDAGTFSADSVEVLDLLKVDSEVGGFFGGFASDGYGYLVPSRSF----KGLVGGINTNL-----SAD---------GIAGSHLLENEVRVAGHLE---------SSYSGKLVRVNLTDFSVTGVEVLDLTKVDPDLRGFTGGFAAGHWGFLVPFKNKEVDDE---YSGKMVRFDRRTFDLASVT 1290
++P + P GG + V V L++ GA I Y T T ++ + SG+ I SG + + F+ E + + VV S Y Y VP F + + G+V ++L GK R +F+D+ + G+GPY++QVAV DLA D S G+ GGF+ + S + FL P + ++ A + LG N G ++ + + S+ + +L+L+ VD L+GF F Y VP +N G + KL R F+ SVEVLDL V+S GF G D + R F GLV +N N S D G +G+ + + ++ + YSG + RV+L DF T V+ LDLT VD LRGF GFA + FLVP + K D + SGK+ R D F + ++
Sbjct: 106 DTPEIEPNGGQFNTQVVVRLLTAKLGAAIHYRIVPSTQLATTNLTAAGLFGSGKNFSIAASGDVITLPTYSCKIFAVAVKEGMNDSVVVISNEFKIFPSKYVYLVPYFN-SNFHGRVTRIELGLK--GKKRPRPARFLEFSDYETPNGIGPYNNQVAVIDLATL-DPSFKGFCGGFTAFSNVSFVNETFLVPAADDPNYKTTAWKVILKAQYTASPTHLGFGKPAEMEQAVEYLYLIPYNNGTAYASKVLRIMALTFSSKAPIVEILDLSAVDKSLKGFGSAFTYGSYGYLVPRKNENGLFGKLARFRTDIFTPSSVEVLDLAAVNSHYVGFSGAITWDER--TMNLREFPASNSGLVVRVNLNTFRVSGSLDLALFHPDLCGFSGAVTVTHFAYFVPYMRVRQPDSEEVNPYSGLVARVDLRDF--TSVQFLDLTIVDTGLRGFMRGFAYRQYVFLVPHRWKFFDPKGPTQSGKVARIDTNDFTPSGIS 587
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Match: A0A662XTA7_9STRA (FH2 domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTA7_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.370e-22 Identity = 85/245 (34.69%), Postives = 121/245 (49.39%), Query Frame = 1
Query: 571 FLSPLFNGEDFHGNALQLGNFGNDNVTRFCELDSTLESTSTCLFTVLNLAEVDDDLRGFSGGFLDSGKAYFVPSRNGRGRYAKLVRVDAGTFSADSVEVLDLLKVDSEVGGFFGGFASDGYGYLVPSRSFKGLVGG-INTNLSADGIAGSHLLENEVRVAGHLE-SSYSGKLVRVNLTDFSVTGVEVLDLTKVDPDLRGFTGGFAAGHWGFLVPFKNK--EVDDE-YSGKMVRFDRRTFDLASVT 1290
+L P FNG + + +++ L ST S S + T L+LA V +L+GF F D Y VP N G + LVR F +SVEVLDL V+ GF F + +LVP R + L G + NL ++ S L+ V+ + E + YSG + RV+L DF T V LDLT + +LRGF GFA + LVP +++ V+ + SGK+VR D F + V+
Sbjct: 870 YLVPFFNGVSYASSVIRV-------------LASTFSSMSPIVET-LSLASVSANLKGFGASFTDDSYGYLVPRENENGLFGTLVRFPLENFVPESVEVLDLAAVNPRFVGFSSAFTYGNFAFLVPFR--RPLEGDELTQNLREFPVSNSGLVVRRVKESASQELNPYSGLIARVDLRDF--TSVSFLDLTAIHSELRGFMRGFAYRQYVILVPHRSEFYRVNGQSQSGKVVRIDTTGFSASGVS 1096
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Match: R1E373_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E373_EMIHU) HSP 1 Score: 110 bits (274), Expect = 4.070e-22 Identity = 79/268 (29.48%), Postives = 125/268 (46.64%), Query Frame = 1
Query: 499 ADGDSSLVGYWGGFSGEVDGSALGFLSPLFNGEDFHGNALQLGNFGNDNVTRFCELDSTLESTSTCLFTVLNLAEVDDDLRGFSGGFLDSGKAYFVPSRNGRGRYAKLVRVDAGTFSADSVEVLDLLKVDSEVGGFFGGFASDGYGYLVPSR--SFKGLVGGIN-TNLSADGIAGSHLLENEVRVAGHLES---------------SYSGKLVRVNLTDFSVTGVEVLDLTKVDPDLRGFTGGFAAGHWGFLVPFKNKEVDDEYSGKM 1248
AD +S+L G+ GG+ + + P NG + G A ++ +L S+ LNLA+ + +L+GF GGF AY++P++N GR RV FS VE L+L +S + GF GGFA+D + Y VP + S G +N ++ S+ G+ +L + + G + SG RV+L+DFS +GVE L+L + +L+G GGFA + VP+ N Y+ ++
Sbjct: 695 ADTNSNLKGFQGGYVTDTHA----YYVPYSNGAAYSGYAARV----------------SLSDFSSSGVEYLNLADTNPNLKGFFGGFATDAHAYYLPNKNDGGRNGYAARVSLSDFSNSGVEYLNLADTNSNLKGFNGGFATDAHAYFVPDKNGSPHGYAARVNLSDFSSSGVEYLNLADTNSNLRGFGRGFATDAHAYYAPWDYGARSGYAARVSLSDFSSSGVEYLNLADTNSNLKGLNGGFATATHAYYVPYHNGGAFHGYAARV 942
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Match: G4YU93_PHYSP (Apple domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YU93_PHYSP) HSP 1 Score: 108 bits (270), Expect = 1.050e-21 Identity = 133/492 (27.03%), Postives = 204/492 (41.46%), Query Frame = 1
Query: 46 ESPSLYPAGGTYYHPVAVSLVSNS--GALIFYTTDGTEPSE----SSDVVSSGELIVIEESGTLRATAAPTRSTFSAFSSEEVQ-ATFVVYSEGKC---GYAYFVPDFTRTGYSGKVVEVDLQTAELGKVRLHSV-VTDFADFYSDLGVGPYDDQVAVQDLAADGDSSLVGYWGGFSGEVDGSALGFL-------SPLFNGEDF-------------------------HGNALQLGNFGNDNV--TRFCELDSTLESTSTCLFTVLNLAEVDDDLRGFSGGFLDSGKAYFVPSRNGRGRYAKLVRVDAGTFSADSVEVLDLLKVDSEVGGFFGGFASDGYGYLVPSRSF----KGLVGGINTNLSADGIAGSHLLEN------------------------EVRVAGHLE-SSYSGKLVRVNLTDFSVTGVEVLDLTKVDPDLRGFTGGFAAGHWGFLVPFKNKEVDDE---YSGKMVRFDRRTFDLASVT 1290
++P + P+GG + V L++ AL + TE + +SD+ +G+ I SG + + F+ E + +T +V +E + Y Y VP F Y G+V ++L + GK R +F+D+ + GVGPYD+QV V D+AA D G++ GF+ + + P +N ++ H L L F N + ++ + + +++T + L++ +D L+GF F Y VP N G + KLVR F+A SVEVLDL +D GF F D + R F GLV + +LS + GS V+ E + YSG + RV+L DFS V+ L+LT VD LRGF GFA + FLVP ++ D SGK+ R D F + V+
Sbjct: 96 DAPEIEPSGGLVNTQIVVRLLTAKLGAALHYQVIPSTELASRNLTASDLFGAGQNFSIAASGDVITLPTYSCKLFAIAVKEGMDDSTLIVSNEYQIFPSKYVYLVPYFNGE-YHGRVARIELDSK--GKKRPRPARFLEFSDYETPNGVGPYDNQVDVIDMAAL-DLVFKGFYSGFTALSKATFVNETYVVPAADDPNYNTTEWRLALKAQYTPSTSHSGFGIPAEIEQHVEYLYLVPFYNGTIYASKVLRVMALTFASATPIVETLDVGSLDKSLKGFGSSFTVGSYGYLVPRENEFGLFGKLVRFRVDNFAASSVEVLDLAAIDPRYVGFSSAFTCDEL--TMNLREFPVSNSGLV--VRIDLSTFRVTGSXXXXXXXXXXXXXXXXVTVTHFAYFVPYMRVKAPDSQELNPYSGLVGRVDLRDFS--SVQYLNLTAVDSGLRGFKKGFAYRQYVFLVPHRSSFYDTSKPTQSGKVARIDTNDFSSSGVS 577 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8646.16605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8646.16605.1 >prot_H-paniculata_contig8646.16605.1 ID=prot_H-paniculata_contig8646.16605.1|Name=mRNA_H-paniculata_contig8646.16605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=431bp TTEDPRRSLAVTTPTESPSLYPAGGTYYHPVAVSLVSNSGALIFYTTDGTback to top mRNA from alignment at H-paniculata_contig8646:6056..10050- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8646.16605.1 ID=mRNA_H-paniculata_contig8646.16605.1|Name=mRNA_H-paniculata_contig8646.16605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3995bp|location=Sequence derived from alignment at H-paniculata_contig8646:6056..10050- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8646:6056..10050- >mRNA_H-paniculata_contig8646.16605.1 ID=mRNA_H-paniculata_contig8646.16605.1|Name=mRNA_H-paniculata_contig8646.16605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2586bp|location=Sequence derived from alignment at H-paniculata_contig8646:6056..10050- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |