mRNA_H-paniculata_contig8634.16593.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig8634.16593.1
Unique Name	mRNA_H-paniculata_contig8634.16593.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Match: A0A6H5KRB3_9PHAE (HSP60 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRB3_9PHAE)

HSP 1 Score: 575 bits (1481), Expect = 1.280e-201
Identity = 307/350 (87.71%), Postives = 330/350 (94.29%), Query Frame = 1

Query:    1 MYARRASVMAARRTAASAVVARRGLASGKDVKFGVEGRALMLQGVDMLADAVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLVRQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGVITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVEKKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCKLVR 1050
            MY R+AS +AARR  A +V   R LA+GKDVKFGVEGRALMLQGVDMLADAVQVT+GPKGRSAIL+Q+Y GVPRITKDGVTVAKSIEFK+KF +MGAQLVRQVASKTNDAAGDGTT+ATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATD VV+VLS+ISKPISTKEEVAQVGTISANSE EIG+LIA+AMERVG EGVITVQDGKTL+NEIEVVEGM+FDRGYISPYFVTD KTQMCE+ENP+ILIVE+KVSTI SIIPLLE TVKSQRPLLI+AEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQD+AVLTGGQVISEEVGLKLED T + CGTCKLV+
Sbjct:    1 MYLRQASALAARRATAGSV---RRLATGKDVKFGVEGRALMLQGVDMLADAVQVTMGPKGRSAILEQTY-GVPRITKDGVTVAKSIEFKNKFHDMGAQLVRQVASKTNDAAGDGTTSATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDHVVSVLSDISKPISTKEEVAQVGTISANSETEIGDLIASAMERVGNEGVITVQDGKTLDNEIEVVEGMKFDRGYISPYFVTDNKTQMCEMENPLILIVERKVSTINSIIPLLEATVKSQRPLLIVAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDLAVLTGGQVISEEVGLKLEDATPDHCGTCKLVK 346

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BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Match: A0A835YJG0_9STRA (Chaperonin Cpn60/TCP-1 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJG0_9STRA)

HSP 1 Score: 520 bits (1338), Expect = 6.210e-180
Identity = 273/347 (78.67%), Postives = 309/347 (89.05%), Query Frame = 1

Query:   10 RRASVMAARRTAASAVVARRGLASGKDVKFGVEGRALMLQGVDMLADAVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLVRQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGVITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVEKKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCKLVR 1050
            R+ S   ARR  +      RG+A+GKD+KFGVEGRA MLQGV+ LADAVQVTLGPKGR+ +L+QSY G P+ITKDGVTVAK IEFKDKFQNMGAQLVRQVASK ND AGDGTTTATVLTRAIFREGCK+VAAGMNP DLR+GI++ATD+VV VLS+ISK ISTKEEVAQV TISANSE+EIG LIA AMERVG+EGVITVQDGKTL NE+EVVEGMRFDRGYISPYF+TD K+Q+ ELENP IL+VEK+VS++QS+IPLLE TVKSQRPLLIIAEDVESEALATLVVNKLRAG+KVCAVKAPGFGDNRKAT+QDIA+LTGG VISE++GL LE+ T +  G+CKL +
Sbjct:    3 RQTSSRVARRAISGLQQQTRGMAAGKDLKFGVEGRAAMLQGVEKLADAVQVTLGPKGRNVVLEQSY-GAPKITKDGVTVAKHIEFKDKFQNMGAQLVRQVASKANDEAGDGTTTATVLTRAIFREGCKSVAAGMNPTDLRRGIQMATDKVVEVLSQISKTISTKEEVAQVATISANSEVEIGSLIADAMERVGKEGVITVQDGKTLHNELEVVEGMRFDRGYISPYFITDAKSQLVELENPFILLVEKRVSSLQSLIPLLEMTVKSQRPLLIIAEDVESEALATLVVNKLRAGLKVCAVKAPGFGDNRKATMQDIAILTGGTVISEDIGLTLENATQQHLGSCKLAK 348

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BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Match: A0A6U3QVY4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QVY4_9STRA)

HSP 1 Score: 510 bits (1313), Expect = 3.350e-176
Identity = 264/327 (80.73%), Postives = 292/327 (89.30%), Query Frame = 1

Query:   67 RGLASGKDVKFGVEGRALMLQGVDMLADAVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLVRQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGVITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVEKKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCKLV 1047
            R  ++GKDV FG EGRA+ML+GVD LADAVQVTLGPKGR+ +LDQSY G P+ITKDGVTVAK IEFKDKF NMGAQLVRQVA+KTND AGDGTTTATVLTR+I+ EGCK+VAAGMNPMDLR+GI +A D VV  LSEIS+PI TKE + QVGTISANSE EIG+LI+ AMERVG+EGVITV DGKTLENE+EVVEGM+FDRGYISPYFVTD KTQ CE ENP IL+VEKK+ST+QSI+ LLE  VK+QRPL+IIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISE+VGLKLE+VT E  G CK V
Sbjct:   24 RSFSAGKDVMFGTEGRAMMLEGVDKLADAVQVTLGPKGRNVVLDQSY-GAPKITKDGVTVAKGIEFKDKFMNMGAQLVRQVANKTNDLAGDGTTTATVLTRSIYSEGCKSVAAGMNPMDLRRGINMAVDSVVETLSEISEPIDTKERITQVGTISANSEKEIGQLISDAMERVGKEGVITVADGKTLENELEVVEGMKFDRGYISPYFVTDNKTQTCEFENPFILLVEKKISTLQSIVGLLEQVVKTQRPLIIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEDVGLKLENVTEEHLGVCKKV 349

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BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Match: A0A7S0AQZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AQZ9_9STRA)

HSP 1 Score: 493 bits (1269), Expect = 8.910e-172
Identity = 248/324 (76.54%), Postives = 297/324 (91.67%), Query Frame = 1

Query:   79 SGKDVKFGVEGRALMLQGVDMLADAVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLVRQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGVITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVEKKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCKLVR 1050
            SGK++KFGVEGRA ML+GVD+LADAVQVTLGPKGR+AI+ Q Y G P+ITKDGVTVAKSI+F+DKF++MGAQLV+ VASKTND AGDGTTTATVL RAI+ EGCKAVAAGMNP+DLR+GI+LA + VV+ L+EIS+PI++KEE+ QVGTISAN+++EIG LI+ AMERVG+EGVITVQDGKTLENE+EVVEGM+FDRGYISPYF+TD KTQ+CE+ENP+IL+VEKKVS++Q ++PLLE+ +KSQ+ LLI+AEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKAT+QD+A+LTGG VISEEVG+KLE+V     GT K V+
Sbjct:   27 SGKEIKFGVEGRAAMLKGVDLLADAVQVTLGPKGRNAIIAQPY-GAPKITKDGVTVAKSIDFEDKFEDMGAQLVKSVASKTNDIAGDGTTTATVLARAIYSEGCKAVAAGMNPLDLRRGIQLAVNSVVDTLTEISRPITSKEEITQVGTISANADVEIGTLISDAMERVGKEGVITVQDGKTLENELEVVEGMKFDRGYISPYFITDAKTQVCEMENPLILLVEKKVSSLQQLVPLLESVIKSQQSLLIVAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATMQDLAILTGGTVISEEVGMKLEEVQPGHLGTAKKVK 349

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BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Match: A0A7S4JM35_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JM35_9STRA)

HSP 1 Score: 492 bits (1266), Expect = 1.540e-169
Identity = 249/332 (75.00%), Postives = 300/332 (90.36%), Query Frame = 1

Query:   55 VVARRGLASGKDVKFGVEGRALMLQGVDMLADAVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLVRQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGVITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVEKKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCKLVR 1050
            ++A RGLA GK++KFGVEGRA ML+GVD+LADAVQVTLGPKGR+AI+ Q Y G P+ITKDGVTVAKSI+F+DKF++MGAQLV+ VASKTND AGDGTTTATVL RAI+ EGCKAVAAGMNP+DLR+GI+LA ++ V+ L++IS+PI++KEE+ QVGTISANS+ EIG LI+ AMERVG+EGVITVQDGKTL+NE+EVVEGM+FDRGYISPYF+TD KTQ CE+ENP+IL+VEKKVS +Q ++PLLE+ +KSQ+ LLI+AEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKAT+QD+A+LTGG VISEEVG+KLE+V     G CK ++
Sbjct:   18 LIAVRGLA-GKEIKFGVEGRAAMLKGVDLLADAVQVTLGPKGRNAIIQQPY-GAPKITKDGVTVAKSIDFEDKFEDMGAQLVKSVASKTNDVAGDGTTTATVLARAIYSEGCKAVAAGMNPLDLRRGIQLAVNKTVDTLTDISRPITSKEEIGQVGTISANSDTEIGALISDAMERVGKEGVITVQDGKTLDNELEVVEGMKFDRGYISPYFITDAKTQTCEMENPLILLVEKKVSNLQQLVPLLESVIKSQQSLLIVAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATMQDLAILTGGTVISEEVGMKLEEVQPAHLGNCKKIK 347

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BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Match: W7TM88_9STRA (Chaperonin Cpn60/TCP-1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM88_9STRA)

HSP 1 Score: 491 bits (1264), Expect = 9.560e-169
Identity = 257/327 (78.59%), Postives = 292/327 (89.30%), Query Frame = 1

Query:   67 RGLASGKDVKFGVEGRALMLQGVDMLADAVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLVRQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGVITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVEKKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCKLV 1047
            RG+A GKDV+FGV+GRA ML GVD LADAVQVTLGPKGR+AI+DQ + G P+ITKDGVTVAKSIEFK++F NMGA LVRQVASKTND AGDGTTTATVLTRAIF EGCKAVAAG+NPMDLR+G +LA D VV VL++IS+ +++K EV+QVGTISAN E  IG+L+A AMERVG+EGVITVQDGKTL NE+EVVEGM+FDRGYISPYF+TD KTQ  ELENP IL+VEKK+++IQS+IPLLE  VKSQRPLLIIAEDVESEALATLVVNKLRAGIKV AVKAPGFGDNRKATLQDIAVLTGGQVISE++GLK+E+ T +  GT K V
Sbjct:   19 RGMAGGKDVRFGVDGRAQMLMGVDKLADAVQVTLGPKGRNAIIDQPF-GAPKITKDGVTVAKSIEFKERFVNMGAALVRQVASKTNDVAGDGTTTATVLTRAIFSEGCKAVAAGLNPMDLRRGTQLAVDHVVGVLNQISRAVTSKAEVSQVGTISANGEKVIGDLLADAMERVGKEGVITVQDGKTLHNELEVVEGMKFDRGYISPYFITDNKTQTAELENPYILLVEKKITSIQSLIPLLEMVVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVAAVKAPGFGDNRKATLQDIAVLTGGQVISEDLGLKVENTTEDMLGTSKKV 344

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BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Match: B5YLQ5_THAPS (Mitochondrial chaperonin n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLQ5_THAPS)

HSP 1 Score: 488 bits (1256), Expect = 8.610e-168
Identity = 247/326 (75.77%), Postives = 296/326 (90.80%), Query Frame = 1

Query:   73 LASGKDVKFGVEGRALMLQGVDMLADAVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLVRQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGVITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVEKKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCKLVR 1050
            +ASGK+++FGVEGRA ML+GVD+LADAVQVTLGPKGR+AI+ Q Y G P+ITKDGVTVAKSI+F D F++MGAQLV+ VASKTND AGDGTTTATVL RAI+REGCKAVAAGMNP+D+R+GI+ A   VV+ L  IS+PI+++EEV+QVGTISAN++ EIG LI+ AMERVG+EGVITVQDGKT+E+E+EVVEGM+FDRG+ISPYF++D KTQ CELENP+IL+VEKKVS+IQ +IP+LE+ +K Q+ LLI+AEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKAT+QD+A+LTGG VISEEVG+K+EDVT EQ GTCK VR
Sbjct:    1 MASGKEIRFGVEGRAAMLRGVDLLADAVQVTLGPKGRNAIIAQPY-GPPKITKDGVTVAKSIDFADNFEDMGAQLVKSVASKTNDIAGDGTTTATVLARAIYREGCKAVAAGMNPLDVRRGIQQAVGVVVDTLESISRPITSREEVSQVGTISANNDAEIGRLISDAMERVGKEGVITVQDGKTIEDELEVVEGMKFDRGFISPYFISDPKTQTCELENPMILLVEKKVSSIQQLIPVLESIIKGQQSLLIVAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATMQDLAILTGGTVISEEVGMKIEDVTPEQLGTCKRVR 325

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BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Match: A0A7S2A4U9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A4U9_9STRA)

HSP 1 Score: 485 bits (1249), Expect = 2.110e-166
Identity = 251/345 (72.75%), Postives = 306/345 (88.70%), Query Frame = 1

Query:   13 RASVMAARRTAASAVVARRGLASGKDVKFGVEGRALMLQGVDMLADAVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLVRQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGVITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVEKKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCKLV 1047
            R S  AA R +  A+ A R + SGK++KFGVEGRA ML+GVD+LADAVQVTLGPKGR+AI+ Q Y G P+ITKDGVTVAK+I+F+DKF++MGAQLV+ VASKTND AGDGTTTATVL RAI+REGCKAVAAGMNP+DLR+GI+LA + VV  L EI++P+++KEEV+QVGTISAN+++EIG+L++ AMERVG+EGVITVQDGKTLENE+EVVEGM+FDRG+ISPYF+TD K Q+ E+ENP+IL+VEKKVS++Q ++PLLE+ VKSQ  LLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKAT+QD+AVLTGG VIS+E G+KLE+VT +  G+ K +
Sbjct:    7 RKSGAAATRGSRMAIGATRSM-SGKEIKFGVEGRAAMLRGVDLLADAVQVTLGPKGRNAIIQQPY-GAPKITKDGVTVAKAIDFEDKFEDMGAQLVKSVASKTNDVAGDGTTTATVLARAIYREGCKAVAAGMNPLDLRRGIQLAVNSVVKTLGEITRPVTSKEEVSQVGTISANADMEIGQLLSDAMERVGKEGVITVQDGKTLENELEVVEGMKFDRGFISPYFITDPKAQVVEMENPLILLVEKKVSSLQQLVPLLESVVKSQSSLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATMQDLAVLTGGTVISQEAGMKLEEVTPQHLGSAKRI 349

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BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Match: A0A7S2Y065_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y065_9STRA)

HSP 1 Score: 478 bits (1230), Expect = 4.290e-166
Identity = 256/343 (74.64%), Postives = 297/343 (86.59%), Query Frame = 1

Query:   13 RASVMAARRTAASAVVARRGLASGKDVKFGVEGRALMLQGVDMLADAVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLVRQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGVITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVEKKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCK 1041
            RA+ + A R A  AV   RG A GKD+KFGV GRA +L+GVD +ADAVQVTLGPKGR+ ILDQ Y G P+ITKDGVTVAK IEF DKFQNMGAQLVRQVASKTND AGDGTTTATVL RAI REG +AVAAGMNPMDLR+GI+ AT +VV++L EIS+ IS+KEEVAQV TISAN+E E G+LI+ AMERVG+EGVITVQDGKT+ NE+EVVEGM+FDRGYISPYF+T+ KTQ+ E+ENP+IL+VEKK+S++ SI+P+LE  V+SQ+ L+IIAEDVESEALATLVVNKLR GIKVCAVKAPGFGDNRKATLQDIAVLTG QV+SE+VG+ L+ VT E  GTCK
Sbjct:   13 RAAAVPALRAAVGAV---RGFA-GKDIKFGVSGRAELLKGVDKIADAVQVTLGPKGRNVILDQPY-GAPKITKDGVTVAKHIEFTDKFQNMGAQLVRQVASKTNDIAGDGTTTATVLCRAILREGTRAVAAGMNPMDLRRGIEKATLKVVDILGEISREISSKEEVAQVATISANNEREFGDLISEAMERVGKEGVITVQDGKTMHNELEVVEGMKFDRGYISPYFITNNKTQVVEMENPLILLVEKKISSMNSIVPVLEAVVRSQKSLMIIAEDVESEALATLVVNKLRGGIKVCAVKAPGFGDNRKATLQDIAVLTGAQVVSEDVGIPLDKVTEEHLGTCK 350

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BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Match: A0A812SJG7_SYMMI (CPN60 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SJG7_SYMMI)

HSP 1 Score: 476 bits (1226), Expect = 1.410e-165
Identity = 250/332 (75.30%), Postives = 291/332 (87.65%), Query Frame = 1

Query:   55 VVARRGLASGKDVKFGVEGRALMLQGVDMLADAVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLVRQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLATDQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGVITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVEKKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVCAVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCKLVR 1050
            +VARR  A GK VKFGVEGRALML+GVD+LADAVQVTLGPKGR+AI+DQS+ G P+ITKDGVTVAKSIEFKDK++NMGAQLVRQVA+KTND AGDGTTTATVL RAIFREGCK VAAG+NPMDL++G ++A D+VV VL+ IS+ IS+KEEVAQVGTISAN + EIG+L+A AMERVG+EGVITVQDGKTL  E+EVVEGMRFDRG+ISPYFVTD KTQM E + P+IL+   K+S++QS++PLLE+ +K QRPLLIIAEDVESEALATLVVNKLR GIKVCAVKAPGFG+NRKA LQDIAV+TG  VISEE+G+ LE +     GTC  V+
Sbjct:   14 LVARRSFA-GKVVKFGVEGRALMLEGVDLLADAVQVTLGPKGRNAIIDQSF-GPPKITKDGVTVAKSIEFKDKYKNMGAQLVRQVANKTNDVAGDGTTTATVLARAIFREGCKGVAAGLNPMDLKRGGQMAIDKVVEVLTSISRDISSKEEVAQVGTISANGDREIGDLLAEAMERVGKEGVITVQDGKTLHTELEVVEGMRFDRGFISPYFVTDNKTQMVEFDKPLILLYPTKISSLQSMVPLLESVIKMQRPLLIIAEDVESEALATLVVNKLRGGIKVCAVKAPGFGENRKAILQDIAVITGSTVISEEMGMTLEKIEMTDLGTCAKVK 343

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8634.16593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KRB3_9PHAE	1.280e-201	87.71	HSP60 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=...	[more]
A0A835YJG0_9STRA	6.210e-180	78.67	Chaperonin Cpn60/TCP-1 family n=1 Tax=Tribonema mi...	[more]
A0A6U3QVY4_9STRA	3.350e-176	80.73	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S0AQZ9_9STRA	8.910e-172	76.54	Hypothetical protein (Fragment) n=1 Tax=Minutocell...	[more]
A0A7S4JM35_9STRA	1.540e-169	75.00	Hypothetical protein (Fragment) n=1 Tax=Odontella ...	[more]
W7TM88_9STRA	9.560e-169	78.59	Chaperonin Cpn60/TCP-1 n=3 Tax=Monodopsidaceae Tax...	[more]
B5YLQ5_THAPS	8.610e-168	75.77	Mitochondrial chaperonin n=1 Tax=Thalassiosira pse...	[more]
A0A7S2A4U9_9STRA	2.110e-166	72.75	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A7S2Y065_9STRA	4.290e-166	74.64	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A812SJG7_SYMMI	1.410e-165	75.30	CPN60 protein (Fragment) n=1 Tax=Symbiodinium micr...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8634	contig	H-paniculata_contig8634:3576..10145 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	578.2
Seed ortholog evalue	2.6e-162
Seed eggNOG ortholog	2880.D7FLV5
Preferred name	HSP60
KEGG ko	ko:K02940,ko:K04077
KEGG Pathway	ko03010,ko03018,ko04212,ko04940,ko05134,ko05152,map03010,map03018,map04212,map04940,map05134,map05152
KEGG Module	M00177
Hectar predicted targeting category	mitochondrion
GOs	GO:0000003,GO:0000166,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005507,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006457,GO:0006458,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006950,GO:0006996,GO:0007005,GO:0008104,GO:0008144,GO:0008150,GO:0009266,GO:0009314,GO:0009408,GO:0009416,GO:0009453,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0017038,GO:0017076,GO:0019899,GO:0019954,GO:0022626,GO:0030554,GO:0030587,GO:0031090,GO:0031288,GO:0031967,GO:0031974,GO:0031975,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035639,GO:0036094,GO:0040011,GO:0042221,GO:0042330,GO:0042331,GO:0042788,GO:0042886,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044183,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044743,GO:0045041,GO:0045184,GO:0046686,GO:0046872,GO:0046907,GO:0046914,GO:0046956,GO:0048856,GO:0050896,GO:0051082,GO:0051117,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051703,GO:0051704,GO:0052128,GO:0055085,GO:0061077,GO:0065002,GO:0070013,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072655,GO:0090702,GO:0097159,GO:0097367,GO:0098588,GO:0098805,GO:0099120,GO:1901265,GO:1901363,GO:1990542,GO:1990904
EggNOG free text desc.	protein refolding
EggNOG OGs	COG0459@1,KOG0356@2759
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	br01610,ko00000,ko00001,ko00002,ko03011,ko03019,ko03029,ko03110,ko04147
Exons	8
Model size	1050
Cds size	1050
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8634.16593.1	prot_H-paniculata_contig8634.16593.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig8634 3576..10145 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig8634:3576..10145+
coding sequence from alignment at H-paniculata_contig8634:3576..10145+

protein sequence of mRNA_H-paniculata_contig8634.16593.1

>prot_H-paniculata_contig8634.16593.1 ID=prot_H-paniculata_contig8634.16593.1|Name=mRNA_H-paniculata_contig8634.16593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=350bp
MYARRASVMAARRTAASAVVARRGLASGKDVKFGVEGRALMLQGVDMLAD
AVQVTLGPKGRSAILDQSYSGVPRITKDGVTVAKSIEFKDKFQNMGAQLV
RQVASKTNDAAGDGTTTATVLTRAIFREGCKAVAAGMNPMDLRKGIKLAT
DQVVNVLSEISKPISTKEEVAQVGTISANSEIEIGELIAAAMERVGQEGV
ITVQDGKTLENEIEVVEGMRFDRGYISPYFVTDTKTQMCELENPVILIVE
KKVSTIQSIIPLLENTVKSQRPLLIIAEDVESEALATLVVNKLRAGIKVC
AVKAPGFGDNRKATLQDIAVLTGGQVISEEVGLKLEDVTAEQCGTCKLVR

mRNA from alignment at H-paniculata_contig8634:3576..10145+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig8634.16593.1 ID=mRNA_H-paniculata_contig8634.16593.1|Name=mRNA_H-paniculata_contig8634.16593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6570bp|location=Sequence derived from alignment at H-paniculata_contig8634:3576..10145+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACGCTAGGAGAGCCAGTGTTATGGCCGCAAGACGCACTGCTGCGTC
TGCGGTTGTTGCGAGGCGTGGGCTGGCAAGCGGCAAAGACGTCAAATTTG
GAGTGGAGGGAAGGGCGCTTATGCTTCAGGGTGTCGATATGCTTGCGGAT
GCTGTGCAGGTAAGACATCAAGGCTTCCGATCAGAGTCGGCTGTGCGTGG
ATAGGTGCCGCCACTTTTGCAACTGCTTTTGAGTGCCGAATTCACAGGTC
GGCATAGTACAGTACAGTAGTACTGTATTTTGATGCTACAACTGCCGTCG
TAGCACATGTGGCGGTGGATCCTCATCTTTTTTACGGCCGACTGCATCGT
CAACATTCTGGAAACATGACCGTACACAAAAACATGGTGCTGCTCCTAAC
GTCCTTCGAGCAGAGGTGCTAGGATAATCCCGCAGGTCAGGTGACAGCAC
CCGGTGCAGACTTCTGGTCGAATATTAATCCCTTTCTCTCCGTGCTCAGT
GAATTTGAAACTGAGATGATTCTGTGAGGGAAAGAGGGGCATGTGCTGAT
CCATGCATGTCTGCGGCCACGAGAGAATATCTGCTTTTAAGGTTTTGGCG
ATAGCATATAACCACGGGAGGAGGGCCTGTCGACGTCAACGTTGCCGCAG
TTTTTGTCGCCATCAGCAGGGTACAACGACCTAACAACTTCCACCCTGCA
TTCTGCTCTCGCGATGATGTTTTGGGGTGTAGAGAGCGCAGGCTGTCAGT
TGACGCGTAGTTCACGAACTTTCTCCACAATGATGGTGATGCGTCACAGG
CCAAGTCCCGTACTTCGTACTTTCCTGTTCTGTGTTTTACAGTTCTTTGC
CATCGACGCACGTGATGACAACATTACTCGAACCCTGCGAACTGCGATCG
TCTGACCCTGTCTTACCACGCAGAGTACTATTTTGCCTATAGTGTATGGC
CCTCTCACTACCGTTTTGTTTTGCCTTTTCAGCTGTTGGAGACTTTTCTA
TTAGTCTTCCCAGACCAAAAGCTCAACATCGTGCACCATTTATTTTGTAC
CCCCGTCAACTACCGACGAGCTTGATGGGGAGACGTTCATACCCTTTTAT
GTATCTACCGTGGGTGAAACTTCACTTGTCTTCTGCTGTGAAATCCTCTG
GATGGTGAGGTGTCATCCGTGTAACTGGCACCCCCGGCGGTCGCACTTGT
GAACCTCGCCTTTGCTCGAAACTTACGGTCGTGCCTTTGGAATGCGTCGC
TTGCATTACTATCTATTTGTATATCTATATCTATATCTATATCTATATCT
GTACATACATAGGACGGATGTGCTATTAATATCCCACAGACAGTCCAGCC
TTCCACTCCTACACGAGAACAACACTTTTTATCAACACACGCAGGAAATA
GTTGGCATATCGTACCAAGCTTGTTAGCAGTAAGTTACGGTACTTGAAAC
GGTCCTACTGTGTATTCCATCAGCTTGAGCTTGCTGGCACATGTTTGACG
AGATGCTTCCGTATCTGCCTCGGGCTTGATCCAGGTGACTTTGGGGCCTA
AAGGGCGAAGCGCTATTTTGGATCAGTCCTACAGTGGCGTGCCCCGCATC
ACCAAGGACGGGGTCACCGTAGCCAAGAGCATCGAATTCAAGGACAAGTT
CCAGAACATGGGAGCTCAGCTCGTGCGGCAGGTGTGGTGATCGTACTCAA
TACTAGGGAGCCTAGCCGTTGAACACAGGGTCGACCGTGGCTGACCTCGG
CGACTCAGTGTTGTGAGAATTGGCTAGAATCAAGATGGAATGTGGCAACG
TTTTGGTATTCATTTGCACTGGGAAGAACATGACACTTTACACTATGAAC
ACGCCTGTTTGTCAACCCCTCCACCAATTTACCAGATATACACTTGTCAA
ATTAGGTTGTGCACTTTTTCTCCCCAGCAAAATTCAAGATTTTGCCTTAC
TAAACACACACACACACACGCCTCGGATAAAATATCGGTAGACAAAAGCT
GTGTCTTCATCCTAAAAGTAAACTTCAGAATTAGCTGCCTTCATGATGTA
CTGTTGTGCGGAAGAAGGTTAATGAAAGCAGCACCTCCATCGGATTGCTC
CTTTACGCCAGGTGCAAAAGGTCAACATAGGGTTTCCCCGTTTTTCGTGT
TGGGAAGACTAGATACTGTCTGAATGTATTTCACTGCAGCATATATTATA
CTATATTATATTGTACTTGTGCAAATGCATGCATGCTATTATATAGAACT
CCTCGGGAAGGGGGACGAAATTTATTTACTTGTCTTCGTATATGCAGACC
TGTTATTGGTCCTTGGTAAGTTTTTATAACGTGAGAATAGGATTCTCACA
TCTCATAAGCATGTAGCTTTAACAGCTTTGGAACCGAAACCAAATTCATA
GCCAATGATTGATTCTGTTTAATTCAATTGCATTCGTGAGCGATATCAGA
CAAAAAACTGAGTTATGAAGGAGCAGTCCAATGGAAATGCTATCCTCCAT
GCGCTTCATTGAATTATTGGATTTCATTATCAGCTGCCTTGATCACCTTG
GACGATTGAAAAGTTGACCTTCAAACCGTCATCGATTTTGCACTTTCGCA
AGTCGCTGCCTGGATCATTTGCCCCACCTCTACTGTCGTGAAAAGCTCAC
CTTCAAATCTTGATGCTTGAGTCAGATTCCGTGATTAGCTCACCTCCAGA
CCCTCATCGCACTTCAGGTGAAAGGCAGCGATGGCAAGCATAATGTAACA
CCTTCATCTGACTGCTCCCTCATCCGATGAAGGTGTTGAACATTTTAGTA
ATGAAATATTACCATGGATCTGTGATCTTGAACTGCCTGTAGCCTGACCC
GTTGGCCTAACGTACGCTGACTTACCCCCCTCCTCATTCGTTGACGCCTC
CAAGAATATCTAACTGTCCCCATATGCAACTCGGAACTACCTCCATTTTA
TTTCTAGGTGGCCTCGAAAACTAACGACGCTGCTGGGGACGGAACGACGA
CGGCCACTGTGTTAACCCGGGCTATCTTTCGCGAAGGGTGTAAGGTTAGT
GGGCATTCGTGTTTGTCATTTGCCGAGTACTGGTGTTTATTTGGTGTGTG
TTAGGTTGTTGCTGATTGTCTTCGTCCGTAGTGGCCAATCCGTAGTGTCT
AGTTGATCATCCTGTTTTTAGTCTCCAGTTACACTTGGCAGATGAGGTTT
TCCCTCTGCGATGCGTCATTCCTTTACTACGTAAATTGGGCTACAAAGCA
CGGACTCTCTGCGGTTGCTGCGGGACAGATTTTTTCTTTTTTACGTTGCT
CTCATGGGCCAACGTGTGTTCTTGTGAGTGCCTGCTGTGATTGTCATTAT
CTTGAAAGGTTGTTAGAGCTTCCTACACAGCGCCTGGTGGTGTGCACAAG
GCAATCAGTGTAAGATCTTCCAGTGTTTTTTCAACGTTTTTGTTCCAACT
GAGCTGATCCCGAATGATACCTTTATCAGCCCAACATTGACTCGCCGCAC
AGCTAGTTAATGCCGTAATTGTTTGTTTGACGCGCCCCTACTGGTTTCTT
GAAATGATTCACGTTAGGCGGTTGCTGCGGGCATGAACCCGATGGATCTC
CGCAAGGGCATCAAGCTGGCTACGGACCAAGTGGTGAACGTACTGTCAGA
GATCAGTAAGCCCATCTCCACTAAGGAGGAGGTGGCGCAAGTGGGCACCA
TCTCTGCAAACAGGTATGTATGTTTTATGATAGTATGGTATATTTGGCCA
CATTTGACCTGGCGGCTGTACCGCAGTGCTATTTTAGCAAAATTATGATG
GGCGGTAAACTATTTTATGAAAAAGATAAGCTTTCGAGAAGGATGGGGGC
ATGATATTGACCTAGTTGGATTGGTCTTCAATGGCGCTGACGCTGACTTC
AACGCCGTGATGACTCCTACAAGGTCCTCATCATATAGTGATGCGCACGT
TGTTCTTTCAAGAAGGTACGTACTCAACCGACCAATCAGCGGCTTCGCAC
AACCGACGAGCCGACAATCAAAGCCAAGACCAACCGATAACTTGACCTTG
TCCGCACACCAAATCATCGTTCCACACTTGTTTTTCCTCTGGCCCATATT
GCATTTCCTGTTCAGCGTTCGTTAAAGTACTGGTTGCCAGAAGGCACTGT
TCAGTTTCGGTTTCCATGTACCTCATATTTGTGTGATTCCACCTGCATCA
CATGCTGCAGTCGGCTGTTTGCGTGTTCTGATTTATCTTCTAGAGGTACC
TTGGGAATTTTGACGCTCGCATGCTAAACCTTTCTGTTGTGTGGTCTGGA
TCCCTCATCTACGTCCTAAGCCTCTCTTTCCTGTAGCTTACTAACAAATT
TTGTATCTGAAACGGTCGTTTCGTGCGGCTGTGTAATGGCTTTTCCACCC
AAAACAGCGAGATTGAAATCGGAGAGCTGATTGCGGCCGCTATGGAACGA
GTAGGCCAGGAGGGGGTCATCACGGTACAGGTGACTCTCGGAATCTGCGA
CGGCAGCTCCGCTTGGGTTCCGTGGTACACACATGACGATTAAATAAAGG
CTGGAATTTATGTTGGAATCAATTACCCTGCTGGAGGAACCTAGAATGTC
CGGGCAGTGCAAGTTCGAGTTCTTGACGTTGTACTCGAACTAAAATAGAA
AGACAGTGCACTTCTTGGAATGAACGTGCACTCTATAAATTACAGAATAC
CTTGTGCGTTGGACCAATCAATATCCATGCGAGTCGATTCACGTAACAGC
CGTGGACAAACATTCGAACATTTGATGGTGCGGGGGTAAGCTTTAGTGGA
CCTGACGAGTACCTAGATTATATAGGTCGTATGGGTCTTGTTTTAGATCG
CTATTTTACTATTTATGGTCCTGTCGTCCCGACGACAGTGATGTTTCCGG
ACACGACGAAGTCTGTAGTGATGTAACCATTGCAATAATAGTTGGTTGAG
CAAAGCTCTTGCTATTATCGGCGCCAGGCCTATTGTACTGTTTGTAATGT
GATACTTGGTCACTCCTTGCAGTTGACTGCCTTCAACCGTTGGGTCGACA
CATGCCGCCTTAATCATGTGCCCCAATCAGGGGCACCGGAAATACCATTG
CCGCGAAGTTCTCCAAACGGACTGACCCTTGCTAGGTTTTTCTAACCTGA
GGTTTTTCGTTTAAACATGTCGTGCGTATTGCAGGATGGCAAGACCTTGG
AAAACGAAATAGAGGTTGTGGAGGGAATGAGGTTCGACCGTGGGTACATC
TCTCCTTACTTCGTTACCGACACCAAAACACAGATGTGCGAACTGGAAAA
CCCCGTGATCCTCATCGTAGAGAAGAAGGTAACAACGAATCCACGTGTCG
ACAACGTGTCTTGTAGCTGTAGTCGTAGCTGTAGTGATAAGGGAGAGACT
GGTGCGAAGATGTGGAGGGAAAGAGCTTCCAACAGATACGCATGAAAGAT
TCCTACAGACACGAGTAAAAACAAGAAATCTGGAATGAATACTCTAGATG
TTTGAGTTGGGGCAGGTGTCCATGTGACGCGAATAATGTGCGTTGTCCTC
GATATATCATGAAGCATCGAGAAGCTAGGGCAGATAAAATATTCAATCTG
TACAGTACCATCCAGAAAACAAAAAGAACCCGCATGTGTGACTGTTCGCG
GGGTATTTGACCATCGGCAGAGTGAGCATTCATGGACTTGTAAACGAATA
AGTACGTTTTTACCAAAGACAAAAAATGATGGTTCGAGATGGTTGCGAAT
GCTCCATTCGTATTTGTCTGGGGAGTACAAGAATGTCTGAAACCCAATCC
ACATGTTTGTGCAGGAGGTGTTGAGTCAGGATATACCTCTTCATCTTCGG
TCTAGGCTAGTGCTTGCTAGAATTTTTGGTGATGTTGGAAAATGTTGAAT
ATTTTCACACAGCGTGAATGATGTGGCCTGAGACACGGTCGTTTCATTTG
CCTGTTTCACTAATCTGTATCTCAATCGTGTTCACGCCACAGGTGTCGAC
CATTCAATCCATCATCCCTCTCCTGGAGAACACGGTAAAGAGTCAGCGAC
CACTGTTGATCATTGCGGAAGATGTTGAATCGGAGGCACTAGCCACCCTG
GTTGTAAACAAGCTGCGAGCGGGCATCAAGGTTGGTTATTTGGTTGACCT
GAGGTTGGAGAATCTCACTGTCTGACATTTCACGGTGGTTGGGTATTTAT
AATTCCATGGACCGTATGCACAGCCCATGGGCCCATGTGCGTGACGGCTT
GCTACGTTACCAGCCCTTGGAATTCTGTTGTTTTCTAATGCTGTGTCATC
GAGGGAGGTGGGGGGATAGTTGAGGGATAATTAAAGATCTCTTCCGAAGG
GAATACGAGGACGACCGTGCGGATTATTCAGTTTAATCAAGTCAGATGTG
TATTGCGTTGATAGGTATGCGCTGTGAAGGCACCTGGATTTGGGGACAAC
CGCAAGGCCACCTTGCAGGATATCGCGGTCCTGACGGGAGGTCAGGTCAT
CAGCGAAGAAGTGGGACTGAAGCTAGAGGACGTTACCGCGGAGCAGTGCG
GTACCTGCAAGCTGGTAAGG

Coding sequence (CDS) from alignment at H-paniculata_contig8634:3576..10145+

>mRNA_H-paniculata_contig8634.16593.1 ID=mRNA_H-paniculata_contig8634.16593.1|Name=mRNA_H-paniculata_contig8634.16593.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at H-paniculata_contig8634:3576..10145+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACGCTAGGAGAGCCAGTGTTATGGCCGCAAGACGCACTGCTGCGTC
TGCGGTTGTTGCGAGGCGTGGGCTGGCAAGCGGCAAAGACGTCAAATTTG
GAGTGGAGGGAAGGGCGCTTATGCTTCAGGGTGTCGATATGCTTGCGGAT
GCTGTGCAGATGTACGCTAGGAGAGCCAGTGTTATGGCCGCAAGACGCAC
TGCTGCGTCTGCGGTTGTTGCGAGGCGTGGGCTGGCAAGCGGCAAAGACG
TCAAATTTGGAGTGGAGGGAAGGGCGCTTATGCTTCAGGGTGTCGATATG
CTTGCGGATGCTGTGCAGGTGACTTTGGGGCCTAAAGGGCGAAGCGCTAT
TTTGGATCAGTCCTACAGTGGCGTGCCCCGCATCACCAAGGACGGGGTCA
CCGTAGCCAAGAGCATCGAATTCAAGGACAAGTTCCAGAACATGGGAGCT
CAGCTCGTGCGGCAGGTGACTTTGGGGCCTAAAGGGCGAAGCGCTATTTT
GGATCAGTCCTACAGTGGCGTGCCCCGCATCACCAAGGACGGGGTCACCG
TAGCCAAGAGCATCGAATTCAAGGACAAGTTCCAGAACATGGGAGCTCAG
CTCGTGCGGCAGGTGGCCTCGAAAACTAACGACGCTGCTGGGGACGGAAC
GACGACGGCCACTGTGTTAACCCGGGCTATCTTTCGCGAAGGGTGTAAGG
TGGCCTCGAAAACTAACGACGCTGCTGGGGACGGAACGACGACGGCCACT
GTGTTAACCCGGGCTATCTTTCGCGAAGGGTGTAAGGCGGTTGCTGCGGG
CATGAACCCGATGGATCTCCGCAAGGGCATCAAGCTGGCTACGGACCAAG
TGGTGAACGTACTGTCAGAGATCAGTAAGCCCATCTCCACTAAGGAGGAG
GTGGCGCAAGTGGGCACCATCTCTGCAAACAGGCGGTTGCTGCGGGCATG
AACCCGATGGATCTCCGCAAGGGCATCAAGCTGGCTACGGACCAAGTGGT
GAACGTACTGTCAGAGATCAGTAAGCCCATCTCCACTAAGGAGGAGGTGG
CGCAAGTGGGCACCATCTCTGCAAACAGCGAGATTGAAATCGGAGAGCTG
ATTGCGGCCGCTATGGAACGAGTAGGCCAGGAGGGGGTCATCACGGTACA
GCGAGATTGAAATCGGAGAGCTGATTGCGGCCGCTATGGAACGAGTAGGC
CAGGAGGGGGTCATCACGGTACAGGATGGCAAGACCTTGGAAAACGAAAT
AGAGGTTGTGGAGGGAATGAGGTTCGACCGTGGGTACATCTCTCCTTACT
TCGTTACCGACACCAAAACACAGATGTGCGAACTGGAAAACCCCGTGATC
CTCATCGTAGAGAAGAAGGATGGCAAGACCTTGGAAAACGAAATAGAGGT
TGTGGAGGGAATGAGGTTCGACCGTGGGTACATCTCTCCTTACTTCGTTA
CCGACACCAAAACACAGATGTGCGAACTGGAAAACCCCGTGATCCTCATC
GTAGAGAAGAAGGTGTCGACCATTCAATCCATCATCCCTCTCCTGGAGAA
CACGGTAAAGAGTCAGCGACCACTGTTGATCATTGCGGAAGATGTTGAAT
CGGAGGCACTAGCCACCCTGGTTGTAAACAAGCTGCGAGCGGGCATCAAG
GTGTCGACCATTCAATCCATCATCCCTCTCCTGGAGAACACGGTAAAGAG
TCAGCGACCACTGTTGATCATTGCGGAAGATGTTGAATCGGAGGCACTAG
CCACCCTGGTTGTAAACAAGCTGCGAGCGGGCATCAAGGTATGCGCTGTG
AAGGCACCTGGATTTGGGGACAACCGCAAGGCCACCTTGCAGGATATCGC
GGTCCTGACGGGAGGTCAGGTCATCAGCGAAGAAGTGGGACTGAAGCTAG
AGGACGTTACCGCGGAGCAGTGCGGTACCTGCAAGCTGGTAAGGGTATGC
GCTGTGAAGGCACCTGGATTTGGGGACAACCGCAAGGCCACCTTGCAGGA
TATCGCGGTCCTGACGGGAGGTCAGGTCATCAGCGAAGAAGTGGGACTGA
AGCTAGAGGACGTTACCGCGGAGCAGTGCGGTACCTGCAAGCTGGTAAGG