mRNA_H-paniculata_contig8623.16583.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Match: D8LS47_ECTSI (Predicted methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS47_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 7.210e-159 Identity = 245/373 (65.68%), Postives = 271/373 (72.65%), Query Frame = 1
Query: 16 LVFVTGPTCGRQC--VVARFTRQQMMDMGLLPPPNLPSDQTEEQSHTANGAEVAGEEILVGAVQDASRASGSGEH----GQTEEEXXXXXETPDPIGLIGHFEARALLGHKDTPGSFVGSLDMSMTERDLISTQDGVALPPT-------GDAEPCLVVSWSELGVMVKKAKKGQYGCWELYGDTKTSPYKVSGISESTSRPAMLCAPLRAPGPPTMVLGGFAMHRISGGDQKSTIEPGLDTEHKVTASGARWANGRVLDTCTGLGYTAIAAARCRGVSSVVTVELDEVALRMCTHNPWSREMFESDKITSLEGDCCELVKGFADGEFAVVIHDPPARALCKTTDMYGAAFYKDLARVLKPGGSLFHYIGNPAS 1095
+ F T GR+C FTRQQM+DMGL+PP GAE + +L+ G E + +GLIGHFEA LL K G+FVGSLDMSMTER+L+ST++GVALPP+ GDAE LV SW EL V++KKAKKGQYGCWELY D T P KVS ISESTSRPAMLCAPLR+ G PTMVLGGFAMHRISGGDQKST+EPGLDTEHKV+ASGAR NGRVLDTCTGLGYTAIAAARCRGVS VVTVELDEV+LRMC NPWS+EMF ++KITSL GDCCELVK F DGEFA +IHDPPARALCKTTDMYGAAFYKDLARVLKPGG+LFHYIGNP S
Sbjct: 1 MAFPAPNTGGRRCSNTALAFTRQQMIDMGLVPP---------------EGAEQEAQNLLLSRPYSTEXXXXXXXXXXXXGHPAAMADDAEEPAEAVGLIGHFEASRLLAQKGKEGTFVGSLDMSMTERELVSTEEGVALPPSPAAADGDGDAESNLVASWDELAVVLKKAKKGQYGCWELYADGNT-PCKVSDISESTSRPAMLCAPLRSAGAPTMVLGGFAMHRISGGDQKSTMEPGLDTEHKVSASGARRTNGRVLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVKDFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPES 357
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Match: A0A7S4DCZ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCZ9_HETAK) HSP 1 Score: 293 bits (749), Expect = 5.200e-93 Identity = 144/284 (50.70%), Postives = 191/284 (67.25%), Query Frame = 1
Query: 286 GLIGHFEARALLGH------------KDTPGSFVGSLDMSMTERDLISTQDGVALPPTGDAEPCLVVSWSELGVMVKKAKKGQYGCWELYGDTKTSPYKVSGISESTSRPAMLCAPLRAPGPPTMVLGGFAMHRISGGDQKST-IEPGLDTEHKVTASGARWANGRVLDTCTGLGYTAIAAARCRGVSSVVTVELDEVALRMCTHNPWSREMFESDKITSLEGDCCELVKGFADGEFAVVIHDPPARALCKTTDMYGAAFYKDLARVLKPGGSLFHYIGNPASK 1098
G+I EA LG K+ SF SLD+ TE +++ GV + EP L+ +W EL +V+KAKKG Y C++LY D P+K+S +S++T PAMLCAPL G PTMVLGGF MHRI+G D+K T + P DT++K+ A+G + G VLDTC GLGYTAIAAA C ++ V T+ELD+V++ MC +NPWS+++F+++KI + GD CE++K F F+ +IHDPPARALCK +DMYG AFY DL RVL+PG +LFHYIGNPASK
Sbjct: 88 GVISVHEANIFLGESKDFRKSKSKDEKEVLASFQASLDLGKTEEEVLVLPKGVGI--RHHDEPVLLATWKELDKIVQKAKKGHYACYQLYNDGGCEPWKISAMSKTTGNPAMLCAPLTGSGAPTMVLGGFTMHRITGDDRKKTSMGPQEDTKNKIKAAGFKKVYGSVLDTCLGLGYTAIAAAECANINKVTTIELDDVSIEMCRNNPWSQDIFQNEKINLIHGDACEVIKSFPANHFSGIIHDPPARALCKASDMYGQAFYDDLWRVLRPGATLFHYIGNPASK 369
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Match: A0A7R9U1D7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1D7_9STRA) HSP 1 Score: 255 bits (652), Expect = 4.250e-79 Identity = 139/284 (48.94%), Postives = 182/284 (64.08%), Query Frame = 1
Query: 277 DPIGLIGHFEARALLG-----HKDTPGSFVGSLDMSM--TERDLISTQDGVALPPTGDAEPCLVVSWSELGVMVKKAKKGQYGCWELYGDTKTSPYKVSGISESTSRPAMLCAPLRAPGPPTMVLGGFAMHRISGGDQKSTIEPGLDTEHKVTASGARWANGRVLDTCTGLGYTAIAAARCRGVSSVVTVELDEVALRMCTHNPWSREMFESDKITSLE---GDCCELVKGFADGEFAVVIHDPPARALCKTTDMYGAAFYKDLARVLKPGGSLFHYIGNPASK 1098
D +G+I H EAR LL H SLD+ T + +G+ L G++ V +W++L + KKA KGQ GC++L+ D + P KVS +S +T RPA L PL A G PTM+LGGF+MHRISGGDQKS+++P DT +K+ A GA G VLDTC GLGYTAI AAR GV+ VVT+ELD+ ++ MC NPWS +F ++ ++ GD CE+V AD +F+ +IHDPPA ALCK TD+Y +FY+ L RVLK GG +FHYIGNP SK
Sbjct: 40 DYVGIISHHEARQLLALRHAAHAVANAPLQVSLDLGRHATADHVEIADEGLLLRSGGES----VCTWADLKKICKKADKGQQGCYQLFCDG-SPPQKVSCLSPNTQRPASLMPPLYAGGAPTMLLGGFSMHRISGGDQKSSMDPMEDTRNKIAALGADRLYGEVLDTCCGLGYTAIEAARSSGVTKVVTIELDDASIEMCEANPWSWPLFGDEENLDVDLRRGDACEIVTSLADEQFSAIIHDPPALALCKDTDLYSLSFYEQLRRVLKRGGKIFHYIGNPDSK 318
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Match: A0A0G4FLZ1_VITBC (Methyltransf_25 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FLZ1_VITBC) HSP 1 Score: 238 bits (606), Expect = 6.700e-71 Identity = 134/316 (42.41%), Postives = 177/316 (56.01%), Query Frame = 1
Query: 283 IGLIGHFEARALLG--HK-DTPGSFVGSLDMSMTERDLISTQDGVALPPTGDAEPCLVVSWSELGVMVKKAKKGQYGCWELYGDTKTSPYKVSGISESTSRPAMLCAPLRAPGPPTMVLGGFAMHRISGGDQKS--------------------------------------------TIEPGLDTEHKVTASGARWANGRVLDTCTGLGYTAIAAARCRGVSSVVTVELDEVALRMCTHNPWSREMFESDKITSLEGDCCELVKGFADGEFAVVIHDPPARALCKTTDMYGAAFYKDLARVLKPGGSLFHYIGNP 1089
+ ++ H EA +++ H D P ++D+ + E L+ +++GVAL D ++ SW ELG +V + +KG+ GC+EL GD + P +V+ ISEST R A L PL G PTM+L GFAMHR+ S ++EP DT K+ + G GRVLD CTGLGYTAIAA+R G +V+T+ELDEV+L MC NPWSRE+ SDKIT L GD EL+ D F+VVIHDPPARALCK D++G FY +L RVL+ GG LFHY+GNP
Sbjct: 112 VAVVSHREAESIVDSYHSLDGPSEVSVTVDLGLREMRLLLSEEGVALLDHPDR---ILASWEELGDIVDRGRKGRGGCYELVGDGEHKPQRVASISESTGRQAALIPPLTDNGAPTMLLAGFAMHRVVSDSSASPASKRRSSPADDPLATARDRKRRKXXXXXXXXRTRGRTRPSDDGSMEPWKDTMRKLESLGPGGVMGRVLDICTGLGYTAIAASREEGAPAVLTIELDEVSLDMCRRNPWSRELLTSDKITMLRGDASELITELPDESFSVVIHDPPARALCKEGDLFGEVFYSELYRVLRRGGRLFHYLGNP 424
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Match: A0A4D9D0J7_9STRA (MTS domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0J7_9STRA) HSP 1 Score: 212 bits (539), Expect = 2.870e-61 Identity = 126/303 (41.58%), Postives = 173/303 (57.10%), Query Frame = 1
Query: 283 IGLIGHFEARALLGHKDTPGSFVG----------SLDMSMTERDLISTQDGVALP---------PTGDA-EPCLVVSWSELGVMVKKAKKGQYGCWELYGDTKTSPYKVSGISESTSRPAMLCAPLRAPGPPTMVLGGFAMHRISGGDQKSTIEPGLDTEHKVTASGARWANGRVLDTCTGLGYTAIAAARCRGVSSVVTVELDEVALRMCTHNPWSREMFESDK---------ITSLEGDCCELVKGFADGEFAVVIHDPPARALCKTT-DMYGAAFYKDLARVLKPGGSLFHYIG-NPASK 1098
+G+I H EA LL ++ G G SLD+ +E ++ T++G+A+P P +A EP LV +W EL +V +A++G+ GC+ LY D T P+K+S +S T R A L L GPPT+VLG + MHR+ G + P DT K+ A + G+VLDT TGLGYTAIAAARC V+ VVTVE D+ AL M +NPWS ++F S I ++GD CEL+ F D FA V+HDPP+ AL + +Y AFY L RVL+ G LFH++G +P +K
Sbjct: 49 VGVISHHEALELLCLREGLGGRGGRGGVHYHDGVSLDLGRSETMVVVTEEGIAVPVVEASHPRHPQREAREPALVATWGELEDIVDQARRGRPGCFTLYTDG-TQPWKISAVSLQTGRAANLLPSLHVKGPPTVVLGSYRMHRLDGPRPGRYLGPAEDTRRKLDAIKMKKVYGKVLDTTTGLGYTAIAAARCAHVTEVVTVEADQAALEMSRYNPWSTDLFSSPSARASQGLSPIHMVQGDVCELIHSFRDNAFAAVMHDPPSMALSRAAVHLYSPAFYAQLYRVLRWRGRLFHFVGGHPKAK 350
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Match: W7U6Z1_9STRA (Methyltransferase type 11 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6Z1_9STRA) HSP 1 Score: 213 bits (541), Expect = 3.870e-60 Identity = 125/303 (41.25%), Postives = 174/303 (57.43%), Query Frame = 1
Query: 283 IGLIGHFEARALLGHKDTPGSFVG----------SLDMSMTERDLISTQDGVALP---------PTGDA-EPCLVVSWSELGVMVKKAKKGQYGCWELYGDTKTSPYKVSGISESTSRPAMLCAPLRAPGPPTMVLGGFAMHRISGGDQKSTIEPGLDTEHKVTASGARWANGRVLDTCTGLGYTAIAAARCRGVSSVVTVELDEVALRMCTHNPWSREMFESDKITS---------LEGDCCELVKGFADGEFAVVIHDPPARALCKTT-DMYGAAFYKDLARVLKPGGSLFHYIG-NPASK 1098
+G+I H EA LL ++ G G SLD+ +E ++ T++G+A+P P +A EP LV +W EL +V +A++G+ GC+ LY D T P+K+S +S T R A L L GPPT+VLG + MHR+ G + P DT K+ A + G+VLDT TGLGYTAIAAARC V+ VVTVE D+ AL M +NPWS ++F S + + ++GD CEL+ F D FA V+HDPP+ AL + +Y AFY L RVL+ G LFH++G +P +K
Sbjct: 197 VGVISHHEALELLCLREGLGGRGGRGGVHYHDGVSLDLGRSETMVVVTEEGIAVPVVEASHPRRPQREAREPALVATWGELEDIVDQARRGRPGCFTLYTDG-TQPWKISAVSLQTGRAANLLPSLHVKGPPTVVLGSYRMHRLDGPRPGRYLGPAEDTRRKLDAIKMKKVYGKVLDTTTGLGYTAIAAARCAHVTEVVTVEADQAALEMSRYNPWSADLFSSPSVRASQGLSPIHMVQGDVCELIHSFRDNAFAAVMHDPPSMALSRAAVHLYSPAFYAQLYRVLRWRGRLFHFVGGHPKAK 498
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Match: A0A7S0JHK9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JHK9_9EUKA) HSP 1 Score: 187 bits (476), Expect = 2.480e-53 Identity = 109/248 (43.95%), Postives = 138/248 (55.65%), Query Frame = 1
Query: 355 SLDMSMTERDLISTQDGVALPPTGDAEPCLVVSWSELGVMVKKAKKGQYGCWELYGDTKTSPYKVSGISESTSRPAMLCAPLRAPGPPTMVLGGFAMHRISGGDQKSTIEPGLDTEHKVTASGARWANGRVLDTCTGLGYTAIAAARCRGVSSVVTVELDEVALRMCTHNPWSREMFESDKITSLEGDCCELVKGFADGEFAVVIHDPPARALCKTTDMYGAAFYKDLARVLKPGGSLFHYIGNPASK 1098
++D+ T D +S G L +S+ + K AKK + G WE Y + + P KV G SE T R A L PL PPT VL GF MHR+ ++PG DT K+ A G++ NGRVLD CTGLGYTAI AA V VVT+ELD + + + NPWS E+FES KI L GD EL+ DG F IHDPP AL +++ Y+ L R L+PGG LFHY+G+PASK
Sbjct: 19 TVDLGRTRPDALSASATTVQIVLGSRSTALPLSF-----LAKAAKKRKLGAWECYANGEYPPSKVEGFSERTRRTASLL-PLPGGVPPTAVLSGFNMHRMR------DVDPGEDTRRKLGAIGSKL-NGRVLDVCTGLGYTAIGAAARPTVDEVVTIELDPLMIELQRANPWSAELFESPKIVRLLGDATELLPALPDGHFHACIHDPPTAALAG--ELFSVEIYRQLRRCLRPGGVLFHYVGDPASK 251
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Match: A0A8J6CC42_DIALT (Methyltransf_25 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CC42_DIALT) HSP 1 Score: 175 bits (443), Expect = 2.210e-48 Identity = 112/273 (41.03%), Postives = 144/273 (52.75%), Query Frame = 1
Query: 304 EARALLGHKDTPGSFVG------SLDMSMTERD-LISTQDGVALPPT-GDAEPCLVVSWSELGVMVKKAKKGQYGCWELYGDTKTSPYKVSGISESTSRPAMLCAPLRAPGPPTMVLGGFAMHRISGGDQKSTIEPGLDTEHKVTASGARWANGRVLDTCTGLGYTAIAAARCRGVSSVVTVELDEVALRMCTHNPWSREMFESDKITSLEGDCCELVKGFADGEFAVVIHDPPARALCKTTDMYGAAFYKDLARVLKPGGSLFHYIGNPASK 1098
EA L + PGS ++D+ T + L+ DGVALP + PC V+W EL +V+ + G + C Y P ++ SE+T R A L P+ G PT VL GF MHR+ G P DT K+ A G +G VLD CTGLGYTAIAAA+ V V T+ELD + M NPWSRE+F S K+ L GD L+ F+ VIHDPP ++ D+Y FY+ L RVL+P G LFHYIG+P SK
Sbjct: 25 EAEQLARLRPPPGSDASVVDGPFTIDLGFTSQPRLLVRADGVALPAAVAPSSPC--VTWDELDAIVRDKRDGAWECEAGY-----EPVRIETFSEATKRHAKLL-PVEH-GCPTAVLAGFNMHRMKG------TNPVADTREKLRAFGEHGPSGAVLDVCTGLGYTAIAAAKLASVERVTTIELDPGMVEMQRRNPWSRELFSSAKVERLLGDATALLPQLGSTAFSYVIHDPPVNSIAG--DLYSLQFYQQLHRVLRPSGRLFHYIGDPDSK 280
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Match: A0A2V3IYU6_9FLOR (MTS domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYU6_9FLOR) HSP 1 Score: 174 bits (442), Expect = 4.720e-48 Identity = 112/283 (39.58%), Postives = 154/283 (54.42%), Query Frame = 1
Query: 277 DPIGLIGHFEARALLGHKDT--------PGSFVGSLDMSMTERDLISTQ-DGVALPPTGDAEPCLVVSWSELGVMVKKAKKGQYGCWELYGDTKTSPYKVSGISESTSRPAMLCAPLRAPGPPTMVLGGFAMHRISGGDQKSTIEPGLDTEHKVTASGARWANGRVLDTCTGLGYTAIAAARCRGVSSVVTVELDEVALRMCTHNPWSREMFESDKITSLEGDCCELVKGFADGEFAVVIHDPPARALCKTTDMYGAAFYKDLARVLKPGGSLFHYIGNPASK 1098
DP+ ++ HFEAR K PG F S+++ IS +GV+LPP P ++SW+ L K +K G +E++ D ++P K++ +S T+RPA L P+ PPT+VL GF+MHR + +P DT K+ A GRVLD CTGLGYTAIAAAR V+S+ T+ELD + + + NPWS E+F KI +E D + + D F V+IHDPPAR L D+Y FY+ L RV LFHYIG+P S+
Sbjct: 35 DPVLVLSHFEARHFFSLKSQATTQLTAHPGPF--SINLGHDSLPAISLDHEGVSLPP----HPHPLLSWAHLK---KLSKNNSTGAYEVFPDL-SAPEKIAELSLLTNRPASLL-PVGPNVPPTLVLAGFSMHRFK------SFDPAADTAEKLAALSPL--RGRVLDICTGLGYTAIAAARSPAVTSLTTIELDPMVISIARRNPWSAELFSLRKIKIVEDDATQALPRLQDKSFDVIIHDPPARVLAG--DLYSLLFYRQLRRVCASRALLFHYIGDPNSR 296
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Match: A0A3M1F061_9CHLR (Methyltransferase domain-containing protein n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1F061_9CHLR) HSP 1 Score: 171 bits (432), Expect = 4.910e-47 Identity = 115/276 (41.67%), Postives = 147/276 (53.26%), Query Frame = 1
Query: 280 PIGLIGHFEARALLGHKDTPGSFVG-SLDMSMTERDLISTQDGVALPPTGDAEPCLVVSWSELGVMVKKAKKGQYGCWELY--GDTKTSPYKVSGISESTSRPAMLCAPLRAPGPPTMVLGGFAMHRISGGDQKSTIEPGLDTEHKVTASGARWANGRVLDTCTGLGYTAIAAARCRGVSSVVTVELDEVALRMCTHNPWSREMFESDKITSLEGDCCELVKGFADGEFAVVIHDPPARALCKTTDMYGAAFYKDLARVLKPGGSLFHYIGNPASK 1098
P + H++AR LL +D SLD+ ++ + T GV LP GD +++W++ V+ + C+ GD + K+ SE +R L PGPPTM++ G MHRI G D PG DT K+ A G G VLDT TGLGYTAIAAAR VVTVELD L +C NPWS E+F + GD E+V+ AD FAVVIHDPP L +YG AFY+ L RVL+PGG L+HYIGNP S+
Sbjct: 7 PHWFLSHYQARPLLAARDAAQDQARTSLDLGRSQATVSLTVAGVLLP--GDC----ILTWAQ----VEAVAADENSCFLCLPSGDARVELEKIQRFSERFNRVYTLYP---TPGPPTMLISGIPMHRIKGAD------PGQDTRSKLRAVGR--ITGPVLDTSTGLGYTAIAAAR--SGHPVVTVELDPTVLDICRLNPWSEELFSLPNVEQRIGDSGEVVETLADDFFAVVIHDPPMFNLAG--HLYGTAFYRGLWRVLRPGGRLYHYIGNPESR 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8623.16583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8623.16583.1 >prot_H-paniculata_contig8623.16583.1 ID=prot_H-paniculata_contig8623.16583.1|Name=mRNA_H-paniculata_contig8623.16583.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=367bp MANVVLVFVTGPTCGRQCVVARFTRQQMMDMGLLPPPNLPSDQTEEQSHTback to top mRNA from alignment at H-paniculata_contig8623:393..4013- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8623.16583.1 ID=mRNA_H-paniculata_contig8623.16583.1|Name=mRNA_H-paniculata_contig8623.16583.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3621bp|location=Sequence derived from alignment at H-paniculata_contig8623:393..4013- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8623:393..4013- >mRNA_H-paniculata_contig8623.16583.1 ID=mRNA_H-paniculata_contig8623.16583.1|Name=mRNA_H-paniculata_contig8623.16583.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2202bp|location=Sequence derived from alignment at H-paniculata_contig8623:393..4013- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |